35f909d45c
gnu: gx-guvnor-lv2: Update to 0.1.
...
* gnu/packages/music.scm (gx-guvnor-lv2): Update to 0.1.
[source]: Use release tarball.
[arguments]: Remove obsolete Makefile patching.
2017-04-10 17:31:02 +02:00
82bf45c8bd
gnu: mod-host: Update to 0.10.6-2-299a39774.
...
* gnu/packages/music.scm (mod-host): Update to 0.10.6-2-299a39774.
2017-04-10 17:18:22 +02:00
3999b6643e
gnu: pianobar: Update to 2016.06.02.
...
* gnu/packages/music.scm (pianobar): Update to 2016.06.02.
2017-04-10 17:07:22 +02:00
f0c5856df7
gnu: ams-lv2: Update to 1.2.1.
...
* gnu/packages/music.scm (ams-lv2): Update to 1.2.1.
2017-04-10 17:06:45 +02:00
c66529d82d
gnu: yoshimi: Update to 1.5.1.1.
...
* gnu/packages/music.scm (yoshimi): Update to 1.5.1.1.
2017-04-10 16:52:40 +02:00
31b7af7659
gnu: jack-1: Update to 0.125.0.
...
* gnu/packages/audio.scm (jack-1): Update to 0.125.0.
2017-04-10 14:53:03 +02:00
8b1e572d0f
gnu: lxde: Add leafpad.
...
* gnu/packages/lxde.scm (lxde)[propagated-inputs]: Add leafpad.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-10 11:46:01 +02:00
9ea0cdaf7f
gnu: rustc: Update to 1.16.0. gnu: cargo: Update to 0.17.0.
...
* gnu/packages/rust.scm (rustc): Update to 1.16.0.
patch-configure: Patch LLVM references.
(cargo): Update to 0.17.0.
[native-inputs]: Update rust-openssl to 0.9.6.
Update rust-libssh2-sys 0.2.5.
Update rust-libz-sys 1.0.13.
Add rust-error-chain 0.7.2.
Add rust-metadeps 1.1.1.
Update rust-openssl-sys 0.9.6.
Update rust-libgit2-sys to 0.6.6.
Add rust-shell-escape 0.1.3.
2017-04-10 09:01:13 +02:00
ae792dbae0
gnu: Add tango-icon-theme.
...
* gnu/packages/gnome.scm (tango-icon-theme): New variable.
2017-04-10 08:49:31 +02:00
1803f2493e
gnu: gcl: Use 'modify-phases' syntax.
...
* gnu/packages/lisp.scm (gcl)[arguments]: Use 'modify-phases' syntax.
2017-04-10 05:38:44 +03:00
47fb74aebc
gnu: gcl: Clean up inputs.
...
* gnu/packages/lisp.scm (gcl)[arguments]: Remove readline substitution,
correctly substitute '/bin/sh' calls.
[inputs]: Add gmp, readline.
[native-inputs]: Remove readline.
2017-04-10 05:38:43 +03:00
5c7815f205
gnu: gcl: Build with gcc@4.9.
...
* gnu/packages/lisp.scm (gcl)[native-inputs]: Add gcc@4.9.
2017-04-10 05:38:42 +03:00
96e98d51a7
gnu: nss, nss-certs: Update to 3.30.1.
...
* gnu/packages/certs.scm (nss-certs): Update to 3.30.1.
* gnu/packages/gnuzilla.scm (nss): Update to 3.30.1.
2017-04-09 23:52:24 +02:00
6461c44c2e
gnu: emacs-projectile: Update to 0.14.0.
...
* gnu/packages/emacs.scm (emacs-projectile): Update to 0.14.0.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-04-09 23:52:12 +02:00
6bb9c85424
gnu: Add freegish.
...
* gnu/packages/games.scm (freegish): New variable.
2017-04-09 23:30:23 +02:00
e9e0fab079
gnu: raxml: Update to 8.2.10.
...
* gnu/packages/bioinformatics.scm (raxml): Update to 8.2.10.
2017-04-09 21:44:14 +10:00
6acdff5875
gnu: r-rsamtools: Update to 1.26.2.
...
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.26.2.
2017-04-09 13:34:53 +02:00
dc8ebe43af
gnu: r-biocparallel: Update to 1.8.2.
...
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.8.2.
2017-04-09 13:34:53 +02:00
3420ed32d8
gnu: r-jsonlite: Update to 1.4.
...
* gnu/packages/web.scm (r-jsonlite): Update to 1.4.
2017-04-09 13:34:52 +02:00
c8ce351afc
gnu: linux-libre: Update to 4.10.9.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.10.9.
(%linux-libre-hash): Update hash.
2017-04-09 06:01:31 -04:00
0ab8ff138c
gnu: linux-libre@4.9: Update to 4.9.21.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.21.
2017-04-09 06:00:47 -04:00
3ca1c5e2ec
gnu: linux-libre@4.4: Update to 4.4.60.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.60.
2017-04-09 06:00:00 -04:00
482cd367c6
Revert "gnu: Add python-openid."
...
This reverts commit ccda568866
2017-04-09 03:50:40 -04:00
f3cf25c3c2
gnu: torsocks: Patch references to 'getcap' and 'which'.
...
* gnu/packages/tor.scm (torsocks)[inputs,arguments]: New fields.
2017-04-08 22:20:06 -05:00
a3c57693e4
gnu: qjackctl: Build with modular Qt.
...
* gnu/packages/audio.scm (qjackctl)[source]: Use sourceforge mirror.
[inputs]: Remove qt, add qtbase, qtx11extras.
2017-04-09 05:31:39 +03:00
dde5831c00
gnu: leafpad: Fix home-page URL.
...
* gnu/packages/text-editors.scm (leafpad)[home-page]: Fix URL.
2017-04-08 21:33:59 -04:00
0bf11648fc
gnu: Add leafpad.
...
* gnu/packages/text-editors.scm (leafpad): New variable.
2017-04-08 21:30:26 -04:00
ea240de4af
screen: Fix info page build failure.
...
* gnu/packages/patches/screen-fix-info-syntax-error.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/screen.scm (screen)[source]: Use it.
2017-04-08 15:53:00 -04:00
b496bfea41
gnu: lz4: Update to 1.7.5.
...
* gnu/packages/compression.scm (lz4): Update to 1.7.5.
[source]: Update source URL. Use patch 'lz4-fix-test-failures.patch'.
[home-page]: Update URL.
* gnu/packages/patches/lz4-fix-test-failures.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2017-04-08 15:36:53 -04:00
b0eb2af2e6
gnu: Add alpine.
...
* gnu/packages/mail.scm (alpine): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-04-08 13:46:58 -04:00
f26d6e4e9c
gnu: certbot: Share python-acme's arguments.
...
* gnu/packages/tls.scm (certbot)[arguments]: Use substitute-keyword-arguments to
inherit from python-acme.
2017-04-08 13:24:36 -04:00
f0e9fda6be
gnu: certbot, python-acme: Update to 0.13.0.
...
* gnu/packages/tls.scm (certbot, python-acme, python2-acme): Update to 0.13.0.
[arguments]: Add 'patch-dependency' phase.
2017-04-08 13:24:31 -04:00
99a8c8bd7d
gnu: python-django-mailman3: Balance parentheses for inputs.
...
* gnu/packages/mail.scm (python-django-mailman3)[inputs]: Balance them.
2017-04-08 12:56:53 -04:00
d99a2add28
gnu: Add postorius.
...
* gnu/packages/mail.scm (postorius): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-04-08 12:40:28 -04:00
8a3741e61b
gnu: Add python-django-mailman3.
...
* gnu/packages/mail.scm (python-django-mailman3): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-04-08 12:40:23 -04:00
14d8f6538f
gnu: Add python-django-gravatar2.
...
* gnu/packages/django.scm (python-django-gravatar2): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-04-08 12:40:20 -04:00
e1f06e1192
gnu: Add python-django-allauth.
...
* gnu/packages/django.scm (python-django-allauth): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-04-08 12:40:16 -04:00
ccda568866
gnu: Add python-openid.
...
* gnu/packages/python.scm (python-openid): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-04-08 12:40:11 -04:00
d2b51c08fd
gnu: Add python-defusedxml.
...
* gnu/packages/xml.scm (python-defusedxml): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-04-08 12:40:06 -04:00
72fa66674d
gnu: Add you-get.
...
* gnu/packages/video.scm (you-get): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-08 15:32:23 +02:00
181170c6ee
gnu: octave: Build with gl2ps support.
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* gnu/packages/maths.scm (octave)[inputs]: Add gl2ps.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-08 15:24:37 +02:00
725d8d2c08
gnu: Add gl2ps.
...
* gnu/packages/gl.scm (gl2ps): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-08 15:23:41 +02:00
1d65b5379b
gnu: r-vegan: Update to 2.4-3.
...
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-3.
[arguments]: Remove build phase "revert-test-deletion".
[native-inputs]: Remove "r-vegan-delete-tests-patch".
2017-04-08 10:25:50 +02:00
1c8ee3fcc2
gnu: r-stringi: Update to 1.1.5.
...
* gnu/packages/statistics.scm (r-stringi): Update to 1.1.5.
2017-04-08 10:25:50 +02:00
4653341b23
gnu: khal: Update to 0.9.5.
...
* gnu/packages/calendar.scm (khal): Update to 0.9.5.
2017-04-07 22:04:51 -04:00
abf0880a67
vm: Add missing module.
...
* gnu/build/vm.scm (define-module): Use module (guix build syscalls).
It fixes the following warnings during guix build :
gnu/build/vm.scm:233:3: warning: possibly unbound variable `mount'
gnu/build/vm.scm:238:3: warning: possibly unbound variable `umount'
gnu/build/vm.scm:268:8: warning: possibly unbound variable `mount'
gnu/build/vm.scm:276:8: warning: possibly unbound variable `umount'
gnu/build/vm.scm:315:4: warning: possibly unbound variable `mount'
gnu/build/vm.scm:323:4: warning: possibly unbound variable `umount'
This was not possible until the previous commit because we had to be sure
that Guile core implementation of 'mount' and 'umount' was used in
initrd context.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-07 23:30:39 +02:00
cf47a8a51d
gnu: dovecot-trees: Update to 2.1.0.
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* gnu/packages/mail.scm (dovecot-trees): Update to 2.1.0.
(source): Change to use 'url-fetch'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-04-07 23:30:38 +02:00
d10fa5c7ff
gnu: Add intel-gpu-tools.
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* gnu/packages/admin.scm (intel-gpu-tools): New variable.
2017-04-07 23:00:53 +02:00
d71b758f3a
gnu: emacs-symon: Update to 20160630.
...
* gnu/packagages/emacs.scm (emacs-symon): Update to 20160630 (this is
the latest tag available from the upstream).
[source]: Use github instead of melpa.
[home-page]: Update.
Signed-off-by: Alex Kost <alezost@gmail.com>
2017-04-07 20:22:29 +03:00
350cfccb06
gnu: Add emacs-adaptive-wrap.
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Suggested-by Ivan Vilata i Balaguer <ivan@selidor.net>.
Fixes <https://bugs.gnu.org/26367 >.
* gnu/packages/emacs.scm (emacs-adaptive-wrap): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
2017-04-07 20:22:29 +03:00
b0dd3436ed
gnu: emacs-debbugs: Update to 0.14.
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* gnu/packages/emacs.scm (emacs-debbugs): Update to 0.14.
2017-04-07 20:22:29 +03:00
b25d3bd973
gnu: perf: Add support for C++ symbol demangling.
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* gnu/packages/linux.scm (perf)[inputs]: Add libiberty.
2017-04-07 17:37:46 +02:00
f214d470d7
gnu: ratpoison: Update to 1.4.9.
...
* gnu/packages/ratpoison.scm (ratpoison): Update to 1.4.9.
[inputs]: Remove libxinerama. Add libxrandr.
Signed-off-by: Leo Famulari <leo@famulari.name>
2017-04-07 10:01:54 -04:00
6cfb860a7a
gnu: guitarix: Disable webkit features.
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The only version of webkit supported by guitarix is unmaintained and contains a
large number of security vulnerabilities, and should be removed from Guix.
* gnu/packages/audio.scm (guitarix)[inputs]: Remove webkitgtk/gtk+-2.
2017-04-07 09:37:14 -04:00
d5a3e8f019
gnu: myrepos: Use 'modify-phases' syntax.
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* gnu/packages/version-control.scm (myrepos)[arguments]: Use
'modify-phases' syntax.
2017-04-07 16:16:14 +03:00
d46e9fcb2c
gnu: myrepos: Update to 1.20170129.
...
* gnu/packages/version-control.scm (myrepos): Update to 1.20170129.
[source]: Source tarballs have been removed from Github, use
git-download to download from upstream repository.
[home-page]: Use https.
2017-04-07 16:16:13 +03:00
ecc39b3f55
gnu: gnubik: Update to 2.4.3.
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* gnu/packages/games.scm (gnubik): Update to 2.4.3.
2017-04-07 16:16:13 +03:00
37982693ca
gnu: vsearch: Update to 2.4.3.
...
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.4.3.
2017-04-07 21:35:07 +10:00
fbd6fb1a9d
gnu: qemu: Update to 2.8.1 [security fixes].
...
Fixes CVE-2016-{9602,9603} and CVE-2017-{2615,2620,2630,5667,5931}.
* gnu/packages/qemu.scm (qemu): Update to 2.8.1.
* gnu/packages/patches/qemu-CVE-2017-2615.patch,
gnu/packages/patches/qemu-CVE-2017-2620.patch,
gnu/packages/patches/qemu-CVE-2017-2630.patch,
gnu/packages/patches/qemu-CVE-2017-5667.patch,
gnu/packages/patches/qemu-CVE-2017-5931.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2017-04-07 00:53:02 -04:00
0715c0e69c
gnu: surf: Update to 2.0.
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* gnu/packages/suckless.scm (surf): Update to 2.0.
[inputs]: Replace webkitgtk/gtk+-2 with webkitgtk.
2017-04-06 22:44:07 -04:00
6b6aca9b36
gnu: flann: Move .mex file to a separate "octave" output.
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That way the closure of flann:out is down from 1 GiB
to 290 MiB.
* gnu/packages/maths.scm (flann)[outputs]: New field.
[arguments]: Add 'set-octave-directory' phase.
2017-04-07 00:17:16 +02:00
3be437398e
gnu: webkitgtk: Update to 2.16.1.
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* gnu/packages/webkit.scm (webkitgtk): Update to 2.16.1.
2017-04-06 17:24:57 -04:00
fe418cc5b2
gnu: armadillo: Change license to ASL 2.0.
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Armadillo versions 7.800 and onwards are licensed under the Apache License
2.0.
* gnu/packages/maths.scm (armadillo)[license]: Change to ASL 2.0.
2017-04-06 15:42:18 +02:00
2aa78c8f04
gnu: re2: Update to 2017-04-01.
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* gnu/packages/regex.scm (re2): Update to 2017-04-01.
2017-04-06 15:07:55 +02:00
fdcc9163d5
gnu: feh: Update to 2.18.3.
...
* gnu/packages/image-viewers.scm (feh): Update to 2.18.3.
2017-04-06 15:05:40 +02:00
2c273a82f3
gnu: libusb: Update to 1.0.21.
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* gnu/packages/libusb.scm (libusb): Update to 1.0.21.
[home-page]: Update to new URL.
2017-04-06 15:03:07 +02:00
05b662663d
gnu: libmtp: Update to 1.1.13 [security fixes].
...
* gnu/packages/libusb.scm (libmtp): Update to 1.1.13.
2017-04-06 14:58:05 +02:00
c9dccf7917
gnu: r-sourcetools: Update to 0.1.6.
...
* gnu/packages/statistics.scm (r-sourcetools): Update to 0.1.6.
2017-04-06 14:39:23 +02:00
e18c731ba0
gnu: r-seqinr: Update to 3.3-6.
...
* gnu/packages/bioinformatics.scm (r-seqinr): Update to 3.3-6.
2017-04-06 14:39:22 +02:00
498d2553ed
gnu: Remove armadillo-for-rcpparmadillo.
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This package is no longer useful, because upstream does not keep the tarballs
of older releases. We use the bundled armadillo sources in the
r-rccparmadillo package instead.
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Remove variable.
2017-04-06 14:39:22 +02:00
0685fe3c86
gnu: r-rcpparmadillo: Update to 0.7.700.0.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.700.0.0.
[source]: Do not delete bundled armadillo sources, because upstream no longer
hosts previous versions.
[propagated-inputs]: Remove "armadillo-for-rcpparmadillo".
[arguments]: Remove because we no longer need to link with the armadillo
library.
* gnu/packages/bioinformatics.scm (r-deseq2)[arguments]: Remove because we no
longer need to link with armadillo library.
2017-04-06 14:39:22 +02:00
133cba8cb5
gnu: armadillo: Update to 7.800.2.
...
* gnu/packages/maths.scm (armadillo): Update to 7.800.2.
2017-04-06 14:39:22 +02:00
a3656b11d2
gnu: r-annotationforge: Update to 1.16.1.
...
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.16.1.
2017-04-06 14:39:22 +02:00
e0d7b31820
gnu: r-shortread: Update to 1.32.1.
...
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.32.1.
2017-04-06 14:39:21 +02:00
2cea968e41
gnu: r-s4vectors: Update to 0.12.2.
...
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.12.2.
2017-04-06 14:39:21 +02:00
7d05eb2dcc
gnu: r-iranges: Update to 2.8.2.
...
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.8.2.
2017-04-06 14:39:21 +02:00
e89cf15091
gnu: r-variantannotation: Update to 1.20.3.
...
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.20.3.
2017-04-06 14:39:21 +02:00
3506a62762
gnu: r-limma: Update to 3.30.13.
...
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.30.13.
2017-04-06 14:39:21 +02:00
4cd4721dbb
gnu: r-genomicranges: Update to 1.26.4.
...
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.26.4.
2017-04-06 14:39:20 +02:00
69b356efce
gnu: r-annotationdbi: Update to 1.36.2.
...
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.36.2.
2017-04-06 14:39:20 +02:00
5cc3b7a548
gnu: r-genomicalignments: Update to 1.10.1.
...
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.10.1.
2017-04-06 14:39:20 +02:00
25d8854723
gnu: r-rtracklayer: Update to 1.34.2.
...
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.34.2.
2017-04-06 14:39:20 +02:00
9ce6cb082e
gnu: r-genomicfeatures: Update to 1.26.4.
...
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.26.4.
2017-04-06 14:39:20 +02:00
57ac1d2f03
gnu: r-seqminer: Update to 5.7.
...
* gnu/packages/bioinformatics.scm (r-seqminer): Update to 5.7.
2017-04-06 14:39:19 +02:00
e8bec95e69
gnu: r-maldiquant: Update to 1.16.2.
...
* gnu/packages/bioinformatics.scm (r-maldiquant): Update to 1.16.2.
2017-04-06 14:39:19 +02:00
20e97759bf
gnu: r-ranger: Update to 0.7.0.
...
* gnu/packages/statistics.scm (r-ranger): Update to 0.7.0.
2017-04-06 14:39:19 +02:00
da2260f96c
gnu: r-pbkrtest: Update to 0.4-7.
...
* gnu/packages/statistics.scm (r-pbkrtest): Update to 0.4-7.
2017-04-06 14:39:19 +02:00
4328bad2cd
gnu: r-rcppeigen: Update to 0.3.2.9.1.
...
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.2.9.1.
2017-04-06 14:39:19 +02:00
a977576780
gnu: r-mclust: Update to 5.2.3.
...
* gnu/packages/statistics.scm (r-mclust): Update to 5.2.3.
2017-04-06 14:39:18 +02:00
0007e645d9
gnu: r-ggthemes: Update to 3.4.0.
...
* gnu/packages/statistics.scm (r-ggthemes): Update to 3.4.0.
2017-04-06 14:39:18 +02:00
47f37fd169
gnu: r-statmod: Update to 1.4.29.
...
* gnu/packages/statistics.scm (r-statmod): Update to 1.4.29.
2017-04-06 14:39:18 +02:00
4c7ab0309a
gnu: r-vipor: Update to 0.4.5.
...
* gnu/packages/statistics.scm (r-vipor): Update to 0.4.5.
2017-04-06 14:39:18 +02:00
2fe41e0fad
gnu: r-pracma: Update to 2.0.4.
...
* gnu/packages/maths.scm (r-pracma): Update to 2.0.4.
2017-04-06 14:39:18 +02:00
2f44ef97a5
gnu: r-mixtools: Update to 1.1.0.
...
* gnu/packages/statistics.scm (r-mixtools): Update to 1.1.0.
[propagated-inputs]: Remove "r-boot", add "r-survival".
2017-04-06 14:39:17 +02:00
7a8efc81f8
gnu: r-viridis: Update to 0.4.0.
...
* gnu/packages/statistics.scm (r-viridis): Update to 0.4.0.
[propagated-inputs]: Add "r-viridislite".
2017-04-06 14:39:17 +02:00
b5d5344f32
gnu: r-viridislite: Update to 0.2.0.
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* gnu/packages/statistics.scm (r-viridislite): Update to 0.2.0.
2017-04-06 14:39:17 +02:00
cdadca5e6f
gnu: r-matrixstats: Update to 0.52.1.
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* gnu/packages/statistics.scm (r-matrixstats): Update to 0.52.1.
2017-04-06 14:39:17 +02:00
af7a4cc8a8
gnu: r-mvtnorm: Update to 1.0-6.
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* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-6.
2017-04-06 14:39:17 +02:00
82b281fe12
gnu: r-e1071: Update to 1.6-8.
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* gnu/packages/statistics.scm (r-e1071): Update to 1.6-8.
2017-04-06 14:39:16 +02:00
1d1fbb7336
gnu: r-sparsem: Update to 1.76.
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* gnu/packages/statistics.scm (r-sparsem): Update to 1.76.
2017-04-06 14:39:16 +02:00
fb708a1c74
gnu: r-xml: Update to 3.98-1.6.
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* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.6.
2017-04-06 14:39:16 +02:00
1c27bb8f44
gnu: r-rsqlite: Update to 1.1-2.
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* gnu/packages/statistics.scm (r-rsqlite): Update to 1.1-2.
2017-04-06 14:39:16 +02:00
0def707ad8
gnu: r-rmarkdown: Update to 1.4.
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* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.4.
2017-04-06 14:39:16 +02:00
ac5e810205
gnu: r-bbmisc: Update to 1.11.
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* gnu/packages/statistics.scm (r-bbmisc): Update to 1.11.
2017-04-06 14:39:16 +02:00
f1870aef99
gnu: r-backports: Update to 1.0.5.
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* gnu/packages/statistics.scm (r-backports): Update to 1.0.5.
2017-04-06 14:39:15 +02:00
d05e45f33c
gnu: r-multitaper: Update to 1.0-13.
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* gnu/packages/statistics.scm (r-multitaper): Update to 1.0-13.
2017-04-06 14:39:15 +02:00
0fbae8ebca
gnu: r-xml2: Update to 1.1.1.
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* gnu/packages/statistics.scm (r-xml2): Update to 1.1.1.
2017-04-06 14:39:15 +02:00
c6e40db528
gnu: r-ade4: Update to 1.7-6.
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* gnu/packages/statistics.scm (r-ade4): Update to 1.7-6.
2017-04-06 14:39:15 +02:00
10ffdb94e4
gnu: r-data-table: Update to 1.10.4.
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* gnu/packages/statistics.scm (r-data-table): Update to 1.10.4.
2017-04-06 14:39:15 +02:00
9e8fac0c45
gnu: r-chron: Update to 2.3-50.
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* gnu/packages/statistics.scm (r-chron): Update to 2.3-50.
2017-04-06 14:39:14 +02:00
b8acb5aa46
gnu: r-cluster: Update to 2.0.6.
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* gnu/packages/statistics.scm (r-cluster): Update to 2.0.6.
2017-04-06 14:39:14 +02:00
e8988ff9a0
gnu: r-dbi: Update to 0.6-1.
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* gnu/packages/statistics.scm (r-dbi): Update to 0.6-1.
2017-04-06 14:39:14 +02:00
5e0fa201a2
gnu: r-gdtools: Update to 0.1.4.
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* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.4.
2017-04-06 14:39:14 +02:00
7267f358a0
gnu: r-stringr: Update to 1.2.0.
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* gnu/packages/statistics.scm (r-stringr): Update to 1.2.0.
2017-04-06 14:39:14 +02:00
5beda28f6b
gnu: r-stringi: Update to 1.1.3.
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* gnu/packages/statistics.scm (r-stringi): Update to 1.1.3.
2017-04-06 14:39:14 +02:00
69a8ed6a12
gnu: r-rcpp: Update to 0.12.10.
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* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.10.
2017-04-06 14:39:13 +02:00
9948b8e24c
gnu: r-digest: Update to 0.6.12.
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* gnu/packages/statistics.scm (r-digest): Update to 0.6.12.
2017-04-06 14:39:13 +02:00
344e4741a1
gnu: r-survival: Update to 2.41-3.
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* gnu/packages/statistics.scm (r-survival): Update to 2.41-3.
2017-04-06 14:39:13 +02:00
a6dcc78cb0
gnu: r-mgcv: Update to 1.8-17.
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* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-17.
2017-04-06 14:39:13 +02:00
9704bda1b3
gnu: r-matrix: Update to 1.2-8.
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* gnu/packages/statistics.scm (r-matrix): Update to 1.2-8.
2017-04-06 14:39:12 +02:00
9aea2cdaff
gnu: r-lattice: Update to 0.20-35.
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* gnu/packages/statistics.scm (r-lattice): Update to 0.20-35.
2017-04-06 14:39:12 +02:00
7ceb26ee83
gnu: r-rprojroot: Update to 1.2.
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* gnu/packages/statistics.scm (r-rprojroot): Update to 1.2.
2017-04-06 14:39:12 +02:00
e15f962fef
gnu: r-htmltable: Update to 1.9.
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* gnu/packages/web.scm (r-htmltable): Update to 1.9.
[propagated-inputs]: Add "r-checkmate" and "r-htmlwidgets".
2017-04-06 14:39:11 +02:00
d3812fb233
gnu: r-curl: Update to 2.4.
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* gnu/packages/web.scm (r-curl): Update to 2.4.
2017-04-06 14:39:11 +02:00
4cd07e487e
gnu: r-genomeinfodb: Update to 1.10.3.
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* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.10.3.
[propagated-inputs]: Add "r-rcurl".
2017-04-06 14:39:11 +02:00
acbeb2d56b
gnu: r-xvector: Update to 0.14.1.
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* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.14.1.
2017-04-06 14:39:11 +02:00
da250f733a
gnu: r-bioccheck: Update to 1.10.1.
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* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.10.1.
[propagated-inputs]: Remove "r-knitr" and "r-devtools".
2017-04-06 14:39:11 +02:00
d51f05f769
gnu: r-tidyr: Update to 0.6.1.
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* gnu/packages/statistics.scm (r-tidyr): Update to 0.6.1.
[propagated-inputs]: Add "r-tibble".
2017-04-06 14:39:10 +02:00
1db293757b
gnu: r-roxygen2: Update to 6.0.1.
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* gnu/packages/statistics.scm (r-roxygen2): Update to 6.0.1.
[propagated-inputs]: Add "r-commonmark", "r-desc", "r-r6", and "r-xml2".
2017-04-06 14:39:10 +02:00
bf6dcf59eb
gnu: Add r-commonmark.
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* gnu/packages/statistics.scm (r-commonmark): New variable.
2017-04-06 14:39:10 +02:00
1cbb07a8e4
gnu: Add r-desc.
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* gnu/packages/statistics.scm (r-desc): New variable.
2017-04-06 14:39:10 +02:00
67deeea41b
gnu: r-readr: Update to 1.1.0.
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* gnu/packages/statistics.scm (r-readr): Update to 1.1.0.
[propagated-inputs]: Remove "r-curl".
2017-04-06 14:39:09 +02:00
33eb555e6f
gnu: r-tibble: Update to 1.3.0.
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* gnu/packages/statistics.scm (r-tibble): Update to 1.3.0.
[propagated-inputs]: Remove "r-assertthat".
2017-04-06 14:39:09 +02:00
aad7808526
gnu: r-jsonlite: Update to 1.3.
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* gnu/packages/web.scm (r-jsonlite): Update to 1.3.
2017-04-06 14:39:09 +02:00
538bce2472
gnu: ldc-bootstrap: Delete failing test.
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* gnu/packages/ldc.scm (ldc-bootstrap)[arguments]: Delete failing test in
build phase.
2017-04-06 14:34:12 +02:00
cb5be6df91
gnu: guile-aspell: Switch to Guile 2.2.
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* gnu/packages/guile.scm (guile-aspell)[inputs]: Replace GUILE-2.0 with
GUILE-2.2.
2017-04-06 10:45:55 +02:00
7295087eb1
gnu: guile-aspell: Remove hard-coded "site/2.0" from $(guilesitedir).
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* gnu/packages/guile.scm (guile-aspell)[arguments]: Remove
#:configure-flags. Add 'set-guilesitedir' phase.
2017-04-06 10:42:51 +02:00
234ea3d653
gnu: guile-aspell: Update to 0.4.
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* gnu/packages/guile.scm (guile-aspell): Update to 0.4.
[arguments] <#:phases>: Adjust 'set-libaspell-file-name' to new source
tree layout.
2017-04-06 10:37:52 +02:00
79f912c710
Revert "gnu: openexr: Add IlmBase include sub-directory to 'OpenEXR.pc'."
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This reverts commit 01fe019166
2017-04-05 22:45:41 +02:00
b28187cd0c
Revert "gnu: bc: Update to 1.07."
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This reverts commit dfee7daedb
2017-04-05 21:23:41 +02:00
cd381c317b
gnu: Move audacity to audio.scm.
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* gnu/packages/audacity.scm: Remove file and move audacity...
* gnu/packages/audio.scm: ...here.
* gnu/local.mk: Remove reference to removed file.
2017-04-05 15:08:14 -04:00
1108a920bd
gnu: sra-tools: Fix glibc naming conflict.
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* gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Add build phase
"patch-away-glibc-conflict" to fix a definition conflict with glibc 2.25.
2017-04-05 18:06:51 +02:00
beebe43176
gnu: sra-tools: Use "modify-phases" syntax.
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* gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Use "modify-phases"
syntax.
2017-04-05 18:06:51 +02:00
fc5b12879f
gnu: diamond: Update to 0.8.37.
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* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.37.
2017-04-05 22:49:01 +10:00
52b2d666ca
gnu: kdevelop: Update to 5.1.0.
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* gnu/packages/kde.scm (kdevelop, kdevplatform): Update to 5.1.0.
2017-04-05 12:12:34 +02:00
dfee7daedb
gnu: bc: Update to 1.07.
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* gnu/packages/algebra.scm (bc): Update to 1.07.
[native-inputs]: Add ed and texinfo.
[arguments]: Use default ‘configure’ phase.
2017-04-05 03:31:58 +02:00
f0bacad682
gnu: bc: Actually use readline.
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* gnu/packages/algebra.scm (bc)[arguments]: Add ‘--with-readline’
to #:configure-flags.
2017-04-05 03:31:58 +02:00
5894b60491
gnu: algebra: Re-order imports.
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* gnu/packages/algebra.scm: Order imports alphabetically.
2017-04-05 03:31:58 +02:00
01fe019166
gnu: openexr: Add IlmBase include sub-directory to 'OpenEXR.pc'.
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* gnu/packages/graphics.scm (openexr)[arguments]: Add
'set-ilmbase-directory-in-pc-file' phase.
2017-04-05 00:53:03 +02:00
f84011d04a
services: cuirass: Wait for networking.
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* gnu/services/cuirass.scm (cuirass-shepherd-service): Add 'networking'
to 'requirements'.
2017-04-05 00:53:03 +02:00
Ricardo Wurmus