4847a62ea9
gnu: Add r-globaloptions.
...
* gnu/packages/cran.scm (r-globaloptions): New variable.
2017-08-17 17:25:47 +02:00
2bdb5c3f78
gnu: Add r-shape.
...
* gnu/packages/cran.scm (r-shape): New variable.
2017-08-17 17:25:47 +02:00
c69d27db57
gnu: Add r-calibrate.
...
* gnu/packages/cran.scm (r-calibrate): New variable.
2017-08-17 17:25:47 +02:00
33ce12e293
gnu: Add r-auc.
...
* gnu/packages/cran.scm (r-auc): New variable.
2017-08-17 17:25:47 +02:00
4a007ffafe
gnu: Add r-annotationhub.
...
* gnu/packages/bioinformatics.scm (r-annotationhub): New variable.
2017-08-17 17:25:47 +02:00
5f96f30f5d
gnu: Add r-interactivedisplaybase.
...
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): New variable.
2017-08-17 17:25:46 +02:00
a71fd67175
gnu: american-fuzzy-lop: Update to 2.49b.
...
* gnu/packages/debug.scm (american-fuzzy-lop): Update to 2.49b.
2017-08-17 18:17:00 +03:00
aacefef222
gnu: american-fuzzy-lop: Add support for non-Intel architectures.
...
* gnu/packages/debug.scm (americal-fuzzy-lop): Add qemu target for
non-Intel targets.
[arguments]: On non-Intel systems, add phase to disable non-Intel
architecture warning and remove incompatible binaries.
2017-08-17 18:16:57 +03:00
721e1987d0
gnu: Add mgba.
...
* gnu/packages/games.scm (mgba): New public variable.
2017-08-17 10:56:04 +02:00
a6d05444ab
gnu: cuirass: Update to 0.0.1-7.6f85bc0.
...
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-7.6f85bc0.
[arguments]: Add guile-git and guile-bytestructures to the load path.
[inputs]: Remove git, add guile-git and guile-bytestructures.
2017-08-17 09:12:46 +02:00
e3b861ce38
gnu: python-cython: Update to 0.26.
...
* gnu/packages/python.scm (python-cython, python2-cython): Update to 0.26.
[source]: Remove patch.
* gnu/packages/patches/python-cython-fix-tests-32bit.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-08-17 06:46:06 +03:00
d6ef422fe7
gnu: Add fbreader.
...
* gnu/packages/ebook.scm (fbreader): New variable.
2017-08-17 02:00:51 +02:00
84a52639c9
gnu: Add liblinebreak.
...
* gnu/packages/ebook.scm (liblinebreak): New variable.
2017-08-17 01:56:38 +02:00
f73f1f0769
gnu: python-cryptography-vectors: Update to 2.0.3.
...
* gnu/packages/python.scm (python-cryptography-vectors): Update to 2.0.3.
2017-08-16 22:35:11 +02:00
f37995fa20
gnu: python-cryptography: Update to 2.0.3.
...
* gnu/packages/python.scm (python-cryptography): Update to 2.0.3.
2017-08-16 22:35:10 +02:00
f886e7cab1
gnu: limnoria: Update to 2017.08.03.
...
* gnu/packages/irc.scm (limnoria): Update to 2017.08.03.
2017-08-16 22:35:10 +02:00
e2a4c13023
gnu: cbatticon: Update to 1.6.6.
...
* gnu/packages/admin.scm (cbatticon): Update to 1.6.6.
2017-08-16 22:35:10 +02:00
f207984985
gnu: Add gpick.
...
* gnu/packages/image.scm (gpick): New variable.
2017-08-16 21:37:33 +03:00
d0b13d7b9b
gnu: fossil: Update to 2.2.
...
* gnu/packages/version-control.scm (fossil): Update to 2.2.
[source]: Add uri for older versions.
[arguments]: Enable previously disabled test.
2017-08-16 21:37:32 +03:00
ab1bd285db
gnu: connman: Update to 1.35.
...
* gnu/packages/connman.scm (connman): Update to 1.35.
2017-08-16 21:37:29 +03:00
e664200c0c
gnu: Add ltris.
...
* gnu/packages/games.scm (ltris): New variable.
2017-08-16 11:28:12 -04:00
af4db693db
gnu: Add ghc-gitrev.
...
* gnu/packages/haskell.scm (ghc-gitrev): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:39 +02:00
e0ca14c7a8
gnu: Add ghc-geniplate-mirror.
...
* gnu/packages/haskell.scm (ghc-geniplate-mirror): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:39 +02:00
298af2a8da
gnu: Add ghc-monadplus.
...
* gnu/packages/haskell.scm (ghc-monadplus): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:39 +02:00
005a08e3dc
gnu: Add ghc-fail.
...
* gnu/packages/haskell.scm (ghc-fail): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:39 +02:00
1eced2a7a8
gnu: Add ghc-edisoncore.
...
* gnu/packages/haskell.scm (ghc-edisoncore): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:39 +02:00
212ae09541
gnu: Add ghc-edisonapi.
...
* gnu/packages/haskell.scm (ghc-edisonapi): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:39 +02:00
a623fd7fed
gnu: Add ghc-murmur-hash.
...
* gnu/packages/haskell.scm (ghc-murmur-hash): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:38 +02:00
ca48a34594
gnu: Add ghc-data-hash.
...
* gnu/packages/haskell.scm (ghc-data-hash): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 17:07:38 +02:00
adcb30642c
gnu: pspp: Update to 0.11.0.
...
This fixes CVE-2017-10791, CVE-2017-10792.
* gnu/packages/statistics.scm (pspp): Update to 0.11.0.
2017-08-16 17:57:40 +03:00
96f23b62e0
gnu: Add ghc-equivalence.
...
* gnu/packages/haskell.scm (ghc-equivalence): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:53:13 +02:00
3f8b8e731c
gnu: Add ghc-boxes.
...
* gnu/packages/haskell.scm (ghc-boxes): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:53:13 +02:00
be04f8020a
gnu: Add ghc-edit-distance.
...
* gnu/packages/haskell.scm (ghc-edit-distance): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:53:13 +02:00
867ed9776c
gnu: Add ghc-stmonadtrans.
...
* gnu/packages/haskell.scm (ghc-stmonadtrans): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:53:12 +02:00
f99a57dc28
gnu: Add ghc-strict.
...
* gnu/packages/haskell.scm (ghc-strict): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:53:12 +02:00
c12562e1e8
gnu: cpphs: Update to 1.20.8.
...
* gnu/packages/haskell.scm (cpphs): Update to 1.20.8.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:53:08 +02:00
2f7966c8e2
gnu: font-google-noto: Use font-build-system.
...
* gnu/packages/fonts.scm (font-google-noto)[build-system]: Use
font-build-system.
[source]: Use url-fetch/zipbomb.
[arguments]: Remove it.
[native-inputs]: Remove it.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2017-08-16 16:18:50 +02:00
d534f3a4d3
gnu: r-mzr: Fix building on aarch64 and armhf.
...
* gnu/packages/bioinformatics.scm (r-mzr)[inputs]: Add boost.
2017-08-16 12:36:25 +03:00
953a12fa9b
gnu: hdf4: Fix building on aarch64.
...
* gnu/packages/maths.scm (hdf4)[arguments]: Add a phase to improve
detection and support for aarch64-linux.
2017-08-16 09:33:11 +03:00
8343d373d5
gnu: cgit: Don't build cgit's special 'git:src' input.
...
This special version of Git is only used within the build process of
cgit. We don't need to build it otherwise, so the package is removed
with this commit.
* gnu/packages/version-control.scm (cgit)[inputs]: Replace the git@2.10
package with an origin reference of the source code.
(git@2.10 ): Remove variable.
2017-08-15 17:59:22 -04:00
2434f5cedf
gnu: Add dssi.
...
* gnu/packages/music.scm (dssi): New variable.
2017-08-15 20:58:03 +02:00
425d66f7a7
gnu: Add emacs-highlight-symbol.
...
* gnu/packages/emacs.scm (emacs-highlight-symbol): New variable.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-15 20:52:58 +02:00
be69176bbd
gnu: fish-guix: Use new download URL.
...
* gnu/packages/shells.scm (fish-guix)[source]: Adjust the download URL.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-15 20:41:23 +02:00
dca82aefbc
gnu: p11-kit: Update to 0.23.8.
...
* gnu/packages/tls.scm (p11-kit): Update to 0.23.8.
2017-08-15 20:38:02 +02:00
6550e5ad64
gnu: signify: Update to 22.
...
* gnu/packages/crypto.scm (signify): Update to 22.
2017-08-15 13:27:30 -04:00
06f31e50b1
gnu: diamond: Update to 0.9.10.
...
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.10.
2017-08-15 18:49:33 +10:00
3837108e40
gnu: bcftools: Fix building on aarch64.
...
* gnu/packages/patches/bcftools-regidx-unsigned-char.patch: New file.
* gnu/packages/bioinformatics.scm (bcftools)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Register it.
2017-08-15 10:31:20 +03:00
2d430f2923
Revert "gnu: pspp: Update to 0.11.0."
...
This FTBFS on x86_64 and i686.
This reverts commit f4c808df5b
2017-08-15 10:03:40 +03:00
14f366e58d
gnu: youtube-dl: Update to 2017.08.13.
...
* gnu/packages/video.scm (youtube-dl): Update to 2017.08.13.
2017-08-15 01:42:49 +02:00
f28fea1ca7
gnu: e2fsprogs: Update to 1.43.5.
...
* gnu/packages/patches/e2fsprogs-32bit-quota-warnings.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/linux.scm (e2fsprogs): Update to 1.43.5.
[source]: Use patch.
2017-08-15 01:08:01 +02:00
15428168ea
gnu: cvs: Fix CVE-2017-12836.
...
* gnu/packages/patches/cvs-2017-12836.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/version-control.scm (cvs)[source]: Use it.
2017-08-14 15:55:31 -04:00
36bfcf7e3a
gnu: git@2.10: Update to 2.10.4 [fixes CVE-2017-1000117].
...
...also disable tests, since they broke after c9f4f56b24git@2.10 ): Update to 2.10.4.
[arguments]: New field.
2017-08-14 21:44:24 +02:00
2bccf1c0ec
gnu: gcc@7: Update to 7.2.0.
...
* gnu/packages/gcc.scm (gcc@7): Update to 7.2.0.
[source]: Switch to xz compression.
2017-08-14 22:30:07 +03:00
a547a6d560
Revert "gnu: e2fsprogs: Update to 1.43.5."
...
Fails to build on i686:
<https://lists.gnu.org/archive/html/guix-devel/2017-08/msg00118.html >
This reverts commit 3ddaa7922b
2017-08-14 21:22:12 +02:00
1faf081b47
gnu: milkytracker: Update to 1.01.00.
...
* gnu/packages/music.scm (milkytracker): Update to 1.01.00.
2017-08-14 14:26:15 -04:00
9634804890
gnu: Add bismark.
...
* gnu/packages/bioinformatics.scm (bismark): New variable.
2017-08-14 12:00:56 +02:00
86763fdd70
gnu: Add r-dexseq.
...
* gnu/packages/bioinformatics.scm (r-dexseq): New variable.
2017-08-14 12:00:51 +02:00
233f4f43bf
gnu: Add perl-math-random-secure.
...
* gnu/packages/crypto.scm (perl-math-random-secure): New variable.
2017-08-14 11:50:42 +02:00
2023b79f59
gnu: Add perl-crypt-random-source.
...
* gnu/packages/crypto.scm (perl-crypt-random-source): New variable.
2017-08-14 11:50:13 +02:00
2bdc07c2a5
gnu: Add perl-type-tiny.
...
* gnu/packages/perl.scm (perl-type-tiny): New variable.
2017-08-14 11:46:23 +02:00
a0eb3104a9
gnu: Add perl-ref-util-xs.
...
* gnu/packages/perl.scm (perl-ref-util-xs): New variable.
2017-08-14 11:46:14 +02:00
44d37e43fe
gnu: Add perl-regexp-util.
...
* gnu/packages/perl.scm (perl-regexp-util): New variable.
2017-08-14 11:46:04 +02:00
413dd21084
gnu: Add perl-type-tie.
...
* gnu/packages/perl.scm (perl-type-tie): New variable.
2017-08-14 11:45:56 +02:00
649238cbc7
gnu: Add perl-math-random-isaac.
...
* gnu/packages/crypto.scm (perl-math-random-isaac): New variable.
2017-08-14 11:45:20 +02:00
d96e162aa9
gnu: Add perl-math-random-isaac-xs.
...
* gnu/packages/crypto.scm (perl-math-random-isaac-xs): New variable.
2017-08-14 11:44:15 +02:00
2fa2179135
gnu: Add perl-hash-fieldhash.
...
* gnu/packages/perl.scm (perl-hash-fieldhash): New variable.
2017-08-14 11:37:08 +02:00
28fd275caf
gnu: arandr: Use absolute path for xrandr.
...
* gnu/packages/xdisorg.scm (arandr)[arguments]: Add configure phase.
2017-08-14 10:01:40 +02:00
9031d26aeb
gnu: linux-libre: Update to 4.12.7.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.7.
(%linux-libre-hash): Update hash.
2017-08-14 03:33:09 -04:00
e96b4378a2
gnu: linux-libre@4.9: Update to 4.9.43.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.43.
2017-08-14 03:32:26 -04:00
7aee6a311b
gnu: linux-libre@4.4: Update to 4.4.82.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.82.
2017-08-14 03:31:29 -04:00
3bfa7af417
gnu: libreoffice: Install .desktop files.
...
* gnu/packages/libreoffice.scm (libreoffice): Add phase to install .desktop
files to $out/share so that LibreOffice will show up in Gnome/KDE/etc and so
that it is associated with the various MIME types of interest.
2017-08-14 09:11:22 +02:00
ac2ddcc66f
gnu: wxmaxima: Update to 17.05.1.
...
* gnu/packages/maths.scm (wxmaxima): Update to 17.05.1.
[arguments]: Put "autoconf" phase after the "unpack" phase. Fix
indentation.
2017-08-13 18:18:27 -04:00
be6e2c3018
gnu: Update open-adventure to d43854f0f6bb8e9eea7fbce80348150e7e7fc34d.
...
* gnu/packages/games.scm (open-adventure): Update to
d43854f0f6bb8e9eea7fbce80348150e7e7fc34d.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-08-13 15:39:47 -04:00
05af41a181
gnu: linenoise: Update to commit 2105ce445821381cf1bca87b6d386d4ea88ee20d.
...
* gnu/packages/shells.scm (linenoise): Update to commit
2105ce445821381cf1bca87b6d386d4ea88ee20d. Fix indentation.
[source]: change to git.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-08-13 15:29:45 -04:00
f152208b0d
gnu: qemu: Fix CVE-2017-{10664,10806,10911,11434}.
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* gnu/packages/patches/qemu-CVE-2017-10664.patch,
gnu/packages/patches/qemu-CVE-2017-10806.patch,
gnu/packages/patches/qemu-CVE-2017-10911.patch,
gnu/packages/patches/qemu-CVE-2017-11434.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/virtualization.scm (qemu)[source]: Use them.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-13 18:28:27 +02:00
d5daf6fbe0
gnu: curl: Fix i686 test failure.
...
* gnu/packages/patches/curl-bounds-check.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/curl.scm (curl-7.55.0)[source]: Use it.
2017-08-13 16:46:41 +02:00
9766082045
gnu: imagemagick: Update to 6.9.9-7.
...
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-7.
2017-08-13 15:14:03 +02:00
f7e8302b4e
gnu: Add emacs-nix-mode.
...
* gnu/packages/emacs.scm (emacs-nix-mode): New variable.
Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-08-13 13:20:30 +05:30
f4c808df5b
gnu: pspp: Update to 0.11.0.
...
This fixes CVE-2017-10791, CVE-2017-10792.
* gnu/packages/statistics.scm (pspp): Update to 0.11.0.
2017-08-13 10:16:17 +03:00
c0761f2e7e
gnu: moreutils: Add more inputs to moreutils.
...
The included ts command requires the Time::Duration and Date::Parse perl
modules for the -r option.
* gnu/packages/moreutils.scm (moreutils)[inputs]: Add perl-timedate and
perl-time-duration.
[arguments]: Wrap ts with PERL5LIB.
2017-08-12 22:09:50 +01:00
861fd04baf
gnu: efl: Don't include gtk+@3 in enclosure.
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* gnu/packages/enlightenment.scm (efl)[propagated-inputs]: Replace
libinput with libinput-minimal.
2017-08-12 23:10:38 +03:00
9be481f8b9
gnu: efl: Update to 1.20.2.
...
* gnu/packages/enlightenment.scm (efl): Update to 1.20.2.
2017-08-12 23:10:36 +03:00
f814379463
gnu: linux-libre: Update to 4.12.6.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.6.
(%linux-libre-hash): Update hash.
2017-08-12 15:52:29 -04:00
5a8fc7de66
gnu: linux-libre@4.9: Update to 4.9.42.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.42.
2017-08-12 15:51:47 -04:00
7d7c84a7bf
gnu: linux-libre@4.4: Update to 4.4.81.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.81.
2017-08-12 15:51:00 -04:00
462ae6f612
gnu: python-pylint: Use Python2 variant system.
...
* gnu/packages/python.scm (python-pylint): Use Python2 variant system.
(python2-pylint): Strip Python2 variant system.
2017-08-12 16:30:16 +02:00
bfcdf88760
gnu: catdoc: Fix CVE-2017-11110.
...
* gnu/packages/patches/catdoc-CVE-2017-11110.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/textutils.scm (catdoc)[source]: Use it.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-08-12 15:30:23 +02:00
3ddaa7922b
gnu: e2fsprogs: Update to 1.43.5.
...
* gnu/packages/linux.scm (e2fsprogs): Update to 1.43.5.
2017-08-12 14:07:41 +02:00
f1f2da6bce
gnu: feh: Update to 2.19.2.
...
* gnu/packages/image-viewers.scm (feh): Update to 2.19.2.
2017-08-12 13:59:14 +02:00
3f09b46d93
gnu: dub: Update to 1.4.1.
...
* gnu/packages/ldc.scm (dub): Update to 1.4.1.
2017-08-11 16:46:00 +02:00
f7fc9667b2
gnu: Add cloc.
...
* gnu/packages/code.scm (cloc): New public variable.
2017-08-11 10:38:30 +02:00
d373c16f33
gnu: imagemagick: Update to 6.9.9-5.
...
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-5.
2017-08-10 20:12:47 -04:00
1c865bfce5
gnu: mksh: Update to 56.
...
* gnu/packages/shells.scm (mksh): Update to 56.
2017-08-11 01:02:12 +02:00
eec0c587af
gnu: ruby-debug-inspector: Update to 0.0.3.
...
* gnu/packages/ruby.scm (ruby-debug-inspector): Update to 0.0.3.
2017-08-11 00:21:00 +02:00
c3b36fa161
gnu: ruby-listen: Update to 3.1.5.
...
* gnu/packages/ruby.scm (ruby-listen): Update to 3.1.5.
2017-08-11 00:20:59 +02:00
98ff58a53d
gnu: ruby-introspection: Update to 0.0.4.
...
* gnu/packages/ruby.scm (ruby-introspection): Update to 0.0.4.
2017-08-11 00:20:59 +02:00
a88f24d860
gnu: ruby-simplecov-html: Update to 0.10.1.
...
* gnu/packages/ruby.scm (ruby-simplecov-html): Update to 0.10.1.
2017-08-11 00:20:58 +02:00
ba074a85d0
gnu: ruby-net-http-digest-auth: Update to 1.4.1.
...
* gnu/packages/ruby.scm (ruby-net-http-digest-auth): Update to 1.4.1.
2017-08-11 00:20:57 +02:00
12313cd071
gnu: ruby-nenv: Update to 0.3.0.
...
* gnu/packages/ruby.scm (ruby-nenv): Update to 0.3.0.
2017-08-11 00:20:57 +02:00
aeb4e61e75
gnu: ruby-rjb: Update to 1.5.5.
...
* gnu/packages/ruby.scm (ruby-rjb): Update to 1.5.5.
2017-08-11 00:20:56 +02:00
Ricardo Wurmus