* guix/scripts/lint.scm (check-patch-file-names): Don't check if patches
start with the package full name since matching the package name (which
is a prefix of the full name) is sufficient.
* guix/import/cran.scm (%bioconductor-updater,
latest-bioconductor-release, bioconductor-package?): New procedures.
(cran->guix-package): Support repositories other than CRAN.
(%bioconductor-url, %bioconductor-svn-url): New variables.
(description->package): Update signature to distinguish between packages
from different repositories.
(latest-release): Rename procedure ...
(latest-cran-release): ... to this.
(cran-package?): Do not assume all R packages are available on CRAN.
* tests/cran.scm: Update tests.
* guix/scripts/import/cran.scm: Add "--archive" option and default to
CRAN.
* guix/scripts/refresh.scm (%updaters): Add "%bioconductor-updater".
* doc/guix.texi: Document Bioconductor importer and updater.
* guix/scripts/package.scm (find-packages-by-description): Change 'rx'
parameter to 'regexps'.
[matches-all?, matches-one?]: New procedures.
Use them.
(process-query): Collect regexps from all 'search' queries, and pass
them to 'find-packages-by-description'.
* tests/guix-package.sh: Add tests.
* doc/guix.texi (Invoking guix package): Document it.
Before that it would include #f for most origins since that the default
value of 'origin-patch-guile'.
* guix/scripts/graph.scm (bag-node-edges): When 'origin-patch-guile'
returns #f, use (default-guile).
* tests/graph.scm ("bag DAG, including origins"): Check for an edge from
O to (default-guile).
Fixes <http://bugs.gnu.org/22280>.
Reported by Leo Famulari <leo@famulari.name>.
* guix/scripts/graph.scm (%bag-emerged-node-type)[edges]: Mimic
%BAG-NODE-TYPE. This is a followup to 38b92da.
* guix/scripts/build.scm (options/resolve-packages): Remove.
(options->things-to-build, transform-package-source): New procedure.
(%transformations): New variable.
(options->transformation): New procedure.
(options->derivations): Rewrite to use 'options->things-to-build' and
'options->transformation'.
* guix/scripts/package.scm (options->upgrade-predicate)
(store-item->manifest-entry): New procedures.
* guix/scripts/package.scm (options->installable): Use them. Remove the
'packages-to-upgrade' and 'packages-to-install' variables by getting rid
of a level of indirection.
* guix/scripts/package.scm (build-and-use-profile): New procedure.
Adapted and moved from...
(guix-package)[process-actions]: ... here. Adjust call sites.
This is a followup to b68d2db, which added a check for updaters at
macro-expansion time. The problem is that, when running 'guix pull',
Guile-JSON is found, so the PyPi updater (say) is added to %UPDATERS,
but then at run time Guile-JSON might be missing.
Reported by orbea on #guix.
* guix/scripts/refresh.scm (maybe-updater): Rewrite as 'syntax-rules'.
Produce code that checks conditions at run time.
(list-updaters): Update docstring.
This fixes a bug whereby some options, such as #:substitute-urls, would
be passed to the daemon too late to have an effect.
* guix/scripts/environment.scm (build-inputs): Remove call to
'set-build-options-from-command-line*'.
(guix-environment): Add call to 'set-build-options-from-command-line' as
early as possible.
* guix/scripts/lint.scm (patch-file-name): New procedure.
(check-vulnerabilities): Use it to filter out patched vulnerabilities.
* tests/lint.scm ("cve: one patched vulnerability"): New test.
Suggested by Hynek Urban <hynek.urban@gmail.com>.
* guix/scripts/substitute.scm (fetch-narinfos): Move body to...
[do-fetch]: ... here. New procedure.
Emit a warning when CACHE-INFO's prefix does not match.
As measured with:
time sh -c 'for i in `seq 1 10` ; do guix package --search-paths ; done'
On my machine, when running:
strace -o ,,s guix package --search-paths
the number returned by:
grep -E '^(open|l?stat).*\.go' ,,s | wc -l
drops from 1610 to 837.
* guix/scripts/package.scm: Remove two unnecessary #:use-module forms.
Autoload (gnu packages ...) modules.
Fixes <http://bugs.gnu.org/21991>.
Reported by Jan Synáček <jan.synacek@gmail.com>.
* guix/scripts/download.scm (guix-download): Call 'leave' when OPTS does
not contain an 'argument' key.
Fixes <http://bugs.gnu.org/21958>.
* guix/scripts/environment.scm (status->exit-code): New procedure.
(exit/status, primitive-exit/status): Use it.
* tests/guix-environment-container.sh: Add test.
* guix/scripts/lint.scm (probe-uri): Add #:timeout parameter. Pass it
to 'open-connection-for-uri' and 'ftp-open'.
(validate-uri): Pass #:timeout 3 to 'probe-uri'.
Fixes <http://bugs.gnu.org/21817>.
Reported by Petter Berntsen <petter@mykolab.ch>.
* guix/scripts/gc.scm (guix-gc)[assert-no-extra-arguments]: New
procedure.
Use it for actions 'collect-garbage', 'optimize', and 'verify'.
* tests/guix-gc.sh: Add tests.
Partly fixes <http://bugs.gnu.org/20255>.
* guix/scripts/package.scm (search-path-environment-variables): Change
'profile' to 'profiles'; expect it to be a list.
(display-search-paths): Likewise.
(%default-options): Remove 'profile' entry.
(%options) <--profile>: Keep previous values associated with 'profile'
in RESULT.
(guix-package)[process-actions, process-query]: Handle the possible
lack of 'profile' pair in OPTS.
Reported by Sleep_Walker and Mathieu Lirzin <mthl@gnu.org>.
* guix/scripts/refresh.scm (maybe-updater, list-updaters): New macros.
(%updaters): Use 'list-updaters' instead of 'list'. Make
%PYPI-UPDATER conditional.
Reported by Paul van der Walt <paul@denknerd.org>
in <http://bugs.gnu.org/21829>.
* guix/scripts/import/hackage.scm (guix-import-hackage): Add missing
argument in call to 'leave'.
* guix/scripts/container/exec.scm (partition-args): Reimplement such
that all args up to and including the PID are returned as the first of
the two values.
Fixes <http://bugs.gnu.org/21068>.
Reported by Germano Gabbianelli <tyrion.mx@gmail.com>
and Mark H Weaver <mhw@netris.org>.
* guix/scripts/system.scm (perform-action): Always add GRUB.CFG to DRVS
for 'init' and 'reconfigure'.
Co-authored-by: Mark H Weaver <mhw@netris.org>
* gnu/services.scm (system-derivation): New procedure.
(system-service-type): New variable.
(boot-script-entry): New procedure.
(boot-service-type): Extend SYSTEM-SERVICE-TYPE.
(etc-entry): New procedure.
(etc-service-type): Extend SYSTEM-SERVICE-TYPE.
(fold-services): Change default #:target-type to SYSTEM-SERVICE-TYPE.
* gnu/system.scm (operating-system-directory-base-entries): New procedure.
(essential-services): Use it. Add an instance of
SYSTEM-SERVICE-TYPE.
(operating-system-boot-script): Pass #:target-type to 'fold-services'.
(operating-system-derivation): Rewrite in terms of 'fold-services'.
* gnu/system/linux-container.scm (system-container): Remove.
(container-script): Use 'operating-system-derivation'.
* guix/scripts/system.scm (export-extension-graph): Replace
BOOT-SERVICE-TYPE by SYSTEM-SERVICE-TYPE.
* doc/images/service-graph.dot: Add 'system' node and edges.
* doc/guix.texi (Service Composition): Mention SYSTEM-SERVICE-TYPE.
(Service Reference): Document it. Update 'fold-services'
documentation.
* guix/scripts/environment.scm (%default-options): Remove 'exec'
association.
(guix-environment): If the user didn't specify a command, use the
default shell, or use /bin/sh when a container is requested.
This patch changes the --ad-hoc flag to be positional. That is, the
packages that appear before --ad-hoc are interpreted as packages whose
inputs should be in the environment; the packages that appear after are
interpreted as packages to be directly added to the environment.
* guix/scripts/environment.scm (tag-package-arg, compact): New
procedures.
(%options): Tweak the handlers for --load and --expression options.
(options/resolve-packages): Preserve package mode tag.
(parse-args): Tweak argument handler to use package tagging procedure.
(guix-environment): Apply ad-hoc behavior on a per package basis.
* tests/guix-environment.sh: Add test.
* doc/guix.texi ("invoking guix environment"): Document new behavior of
--ad-hoc.
Fixes <http://bugs.gnu.org/21773>.
Reported by Jan Synáček <jan.synacek@gmail.com>.
* guix/ui.scm (make-regexp*): New procedure.
* guix/scripts/package.scm (options->installable, guix-package): Use it
when processing user-provided regexps.
Partly fixes <http://bugs.gnu.org/20217>.
* guix/store.scm (set-build-options): Change #:substitute-urls to
default to #f. Send the 'substitute-urls' pair only if
SUBSTITUTE-URLS is true.
* guix/scripts/build.scm (set-build-options-from-command-line): Do not
default to %DEFAULT-SUBSTITUTE-URLS for #:substitute-urls.
* guix/scripts/size.scm (%default-options): Remove 'substitute-urls'.
* guix/scripts/substitute.scm (lookup-narinfos/diverse): New procedure.
(lookup-narinfo): Use it.
(process-query): Change #:cache-url to #:cache-urls.
[valid?]: Remove 'narinfo?' check, which is no longer necessary.
Use 'lookup-narinfos/diverse' instead of 'lookup-narinfos'.
(process-substitution): Change #:cache-url to #:cache-urls.
(%cache-url): Rename to...
(%cache-urls): ... this. Turn into a list.
(guix-substitute): Remove 'getaddrinfo' test with early exit. Adjust
calls to 'process-query' and 'process-substitution'.
* tests/substitute.scm: Change '%cache-url' to '%cache-urls'.
* guix/scripts/substitute.scm (lookup-narinfos): Filter out #f values
from CACHED, such that the end result is exactly a list of narinfos,
not interspersed with #f.
* guix/scripts/challenge.scm (discrepancies): Assume REMOTE is a list of
narinfos.
* guix/scripts/package.scm (delete-generations): Use
'delete-generation*' instead of 'delete-generation'.
(guix-package)[process-actions]: Use 'roll-back*' instead of
'roll-back' and 'switch-to-generation*' instead of
'switch-to-generation'.
(link-to-empty-profile, switch-to-generation,
switch-to-previous-generation, roll-back, delete-generation): Move
to...
* guix/profiles.scm: ... here. Adjust to not print messages and to
return values that can be used by user interfaces.
* guix/ui.scm (display-generation-change, roll-back*,
switch-to-generation*, delete-generation*): New procedures.
* guix/scripts/system.scm (<boot-parameters>): New record type.
(read-boot-parameters): New procedure.
(previous-grub-entries)[system->grub-entry]: Use it.
* guix/scripts/package.scm (guix-package)[process-query](list-generations):
Move part of the body to 'delete-generation' and
'display-profile-content'.
* guix/ui.scm (display-generation, display-profile-content): New
procedures.
* guix/scripts/system.scm (specification->file-system-mapping): Move from
here...
* guix/ui.scm (specification->file-system-mapping): ... to here.
* guix/scripts/enviroment.scm (show-help): Show help for new options.
(%options): Add --container --network, --expose, and --share options.
(%network-configuration-files): New variable.
(launch-environment, launch-environment/container, requisites*,
inputs->requisites): New procedures.
(guix-environment): Spawn new process in a container when requested.
* doc/guix.texi (Invoking guix environment): Document it.
* tests/guix-environment-container.sh: New file.
* Makefile.am (SH_TESTS): Add it.
* guix/scripts/refresh.scm (%options, show-help): Add --type.
(lookup-updater): New procedure.
(update-package): Add 'updaters' parameter and honor it.
(guix-refresh)[options->updaters]: New procedure.
Use it, and honor --type.
* guix/gnu-maintenance.scm (<gnu-release>): Remove.
(coalesce-releases): Move to upstream.scm. Rename to
'coalesce-sources'; adjust callers.
(releases, latest-release): Return <upstream-source> objects instead
of <gnu-release> objects.
(latest-release*, non-emacs-gnu-package?): New procedures.
(gnu-release-archive-types): Remove.
(%gnu-updater): New variable.
(package-update-path, download-tarball, package-update,
update-package-source): Move to...
* guix/upstream.scm: ... here. New file.
* Makefile.am (MODULES): Add it.
* po/guix/POTFILES.in: Replace gnu-maintenance.scm with upstream.scm.
* guix/scripts/refresh.scm (%updaters): New variable.
(update-package): Adjust to new 'package-update' interface.
(guix-refresh): Adjust to new 'package-update-path'. Remove
'false-if-exception' around it.
* guix/scripts/archive.scm (show-help, %options): Add --extract.
(guix-archive): Honor it.
* tests/guix-archive.sh: Test it.
* doc/guix.texi (Invoking guix archive): Document it.
* guix/scripts/system.scm (perform-action): Add #:derivations-only?
parameter and honor it.
(show-help, %options): Add '--derivation'.
(guix-system): Pass #:derivations-only? to 'perform-action'.
* tests/guix-system.sh: Test it.
* doc/guix.texi (Invoking guix system): Document it.
This allows for direct program invokation without needing a shell to act
as a command interpreter.
* guix/scripts/environment.scm (%default-shell): New variable.
(show-help): Adjust description. Remove '--exec' reference.
(%default-options): Use '%default-shell'.
(%options): Adjust '--exec' to run command via the default shell.
(parse-args): New procedure.
(guix-environment): Use 'parse-args'. Use 'system*' instead of
'system'.
* tests/guix-environment.sh: Add test for '--' command invokation.
* doc/guix.texi ("Invoking guix environment"): Use new syntax. Remove
'--exec' documentation.
A client closing the connection while reading from a /nar URL would
leave an open file descriptor in the server. This patch fixes it.
* guix/scripts/publish.scm (swallow-EPIPE): New macro.
(http-write): Use it around 'write-file' call.
Fixes a regression introduced in 5d8d8f3.
* guix/scripts/lint.scm (check-description-style): When no exception is
thrown in 'check-texinfo-markup', return the rendered description.
* guix/scripts/lint.scm (check-description-style): Set 'field' parameter
when emitting a warning in 'check-texinfo-markup'. Catch any error
that may occur in during the 'texi->plain-text' conversion. This is a
followup to commit 2748ee3.
* guix/scripts/lint.scm (%hanging-paren-rx): New variable.
(report-lone-parentheses): New procedure.
(%formatting-reporters): Use it.
* tests/lint.scm ("formatting: lonely parentheses"): New test.
* guix/build/download.scm
(string-pad-middle, store-url-abbreviation, store-path-abbreviation):
New procedures.
(progress-proc): Add #:abbreviation parameter and use it. Generate a
better indeterminate progress string.
* guix/scripts/substitute.scm (assert-valid-narinfo): Add newlines to output.
(process-substitution): Use byte-count->string and store-path-abbreviation.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
Fixes <http://bugs.gnu.org/21451>.
Reported by Steve Sprang <steve.sprang@gmail.com>.
* guix/scripts/system.scm (guix-system)[option-arguments]: Error out
when ACTION is #f.
* guix/scripts/build.scm (%default-log-urls): New variable.
(log-url): New procedure.
(guix-build): Use it.
* doc/guix.texi (Invoking guix build): Document it.
* guix/scripts/publish.scm (narinfo-string): Catch 'system-error' around
'load-derivation' call; return BASE-INFO upon ENOENT. This allows us
to return the narinfo even if DERIVER is missing. Before that, the
exception would be uncaught, leading to 500 Internal Error on the
client side.
* guix/scripts/package.scm (show-help): Add help text for --install-from-file
option.
(%options): Add --install-from-file option.
* tests/guix-package.sh: Test it.
* doc/guix.texi ("invoking guix package"): Document it.
* doc/package-hello.scm: New file.
* doc.am (EXTRA_DIST): Add it.
This removes all I/O, which obviously makes things faster.
* guix/scripts/size.scm (file-size, store-item-exists?): Remove.
(query-path-info*): New procedure.
(file-size*): Rename to...
(file-size): ... this; adjust caller. Use 'query-path-info*' instead of
'file-size'.
Reported by Eric Dvorsak <eric@dvorsak.fr> on #guix.
* guix/scripts/import/elpa.scm (%default-options): Remove redundant
quote which led to an error if --archive option was not specified.
Previously, before replying to a /nar/* request, 'guix publish' would first
build up the whole nar into memory (as a consequence of
<http://bugs.gnu.org/21093>), which obviously doesn't scale.
* guix/scripts/publish.scm (render-nar): Return STORE-PATH instead of a
procedure that calls 'write-file'.
(sans-content-length): New procedure.
(http-write): For 'x-nix-archive', don't call '%http-write'. Instead, call
'write-file' right from here, using BODY as the file name.
* guix/scripts/publish.scm (%http-write): New variable.
(http-write): New procedure.
(concurrent-http-server): New variable.
(run-publish-server): Use it.
* gnu/system.scm (<operating-system>)[kernel-arguments]: New field.
(operating-system-grub.cfg): Honor it.
(operating-system-parameters-file): Add 'kernel-arguments' to the parameters
file.
* guix/scripts/system.scm (previous-grub-entries)[system->grub-entry]: Read
the 'kernel-arguments' field of the parameters file, when available.
* gnu/system/vm.scm (system-qemu-image/shared-store-script):
Use (operating-system-kernel-arguments os) in '-append'.
* doc/guix.texi (operating-system Reference): Document it.
* guix/scripts/substitute.scm (display-narinfo-data,
process-query, process-substitution): New procedures. Code moved from...
(guix-substitute): ... here. Use them.
* guix/scripts/substitute.scm (or*): New macro.
(%cache-url): Honor "untrusted-substitute-urls".
* guix/tests.scm (%test-substitute-urls): New variable.
(open-connection-for-tests): Use it.
* tests/derivations.scm ("derivation-prerequisites-to-build and substitutes",
"derivation-prerequisites-to-build and substitutes, non-substitutable
build", "derivation-prerequisites-to-build and substitutes, local build"):
Pass it to 'set-build-options'.
* tests/guix-daemon.sh: Likewise.
* tests/store.scm ("substitute query, alternating URLs"): New test.
("substitute query", "substitute", "substitute + build-things with output
path", "substitute, corrupt output hash", "substitute --fallback"): Pass
#:substitute-urls to 'set-build-options'.
This ensures that switching between different substitute servers doesn't lead
to a polluted narinfo cache.
* guix/scripts/substitute.scm (narinfo-cache-file): Add 'cache-url'
parameter. Add the base32 of CACHE-URL as a sub-directory under
%NARINFO-CACHE-DIRECTORY. Update callers.
(cached-narinfo): Likewise. Call 'mkdir-p' on the dirname of the cache
file. Update callers.
(remove-expired-cached-narinfos): Add 'directory' parameter and use it
instead of %NARINFO-CACHE-DIRECTORY.
(narinfo-cache-directories): New procedure.
(maybe-remove-expired-cached-narinfo): Call 'remove-expired-cached-narinfos'
for each item returned by 'narinfo-cache-directories'.
* guix/scripts/substitute.scm (<cache>): Rename to...
(<cache-info>): ... this.
(open-cache): Rename to...
(download-cache-info): ... this. Return a <cache-info> or #f.
(open-cache*): Remove.
(cache-narinfo!): Take a URL instead of a <cache> as the first parameter.
(fetch-narinfos): Likewise. Call 'download-cache-info'. Remove use of
'force'.
(guix-substitute): Replace calls to 'open-cache*' with %CACHE-URL.
* guix/scripts/lint.scm (guix): Remove duplicated lines for using
'srfi-34' and 'srfi-35' modules. These lines were introduced twice by
commits b210b35 and 002c57c.
Reported
at <http://lists.gnu.org/archive/html/guix-devel/2015-07/msg00119.html>.
* guix/scripts/substitute.scm (http-multiple-get): When RESP has "Connection:
close", consume HEAD anyway; always call PROC to read from BODY.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
This fixes two problems:
1. Load errors would print an ugly backtrace.
2. When FILE was an absolute name, 'load' was passed an incorrect file
name.
* guix/scripts/environment.scm (options/resolve-packages): Use 'load*' instead
of 'load'.
* guix/scripts/environment.scm (package+propagated-inputs): Add 'output'
parameter. Use it in return value.
(options/resolve-packages): Use 'append-map' instead of 'map'. For 'load'
and 'expression', return all the outputs of the resulting package. For
'package', use 'specification->package+output' instead of
'specification->package'.
(guix-environment): Adjust uses of PACKAGES accordingly.
* doc/guix.texi (Invoking guix environment): Document it.
* tests/guix-environment.sh: Add test for --ad-hoc guile-bootstrap:out.
Before that, 'guix environment guile' (for instance) would define environment
variables that would refer to the "include" output of Bash, the "debug" output
of libgc, etc., even though these are not listed as inputs in the recipe of
'guile'.
* guix/gexp.scm (lower-inputs): Export.
* guix/scripts/environment.scm (evaluate-input-search-paths): Remove
'derivations' parameter; add 'search-paths'. Expect 'inputs' to be
a list of tuples. Adjust callers.
(create-environment): Remove 'derivations' parameter; add 'search-paths'.
(show-search-paths): Likewise.
(package+propagated-inputs): New procedure.
(packages->transitive-inputs, packages+propagated-inputs): Remove.
(build-inputs): Expect INPUTS to be a list of derivation tuples.
(guix-environment): Compute INPUTS using 'package+propagated-inputs',
'package->bag', and 'bag-transitive-inputs'. Move 'run-with-store' higher.
* tests/guix-environment.sh: Add test with FINDUTILS-BOOT0.
* guix/scripts/size.scm: New file.
* Makefile.am (MODULES): Add it.
(SCM_TESTS): Add tests/size.scm.
* doc.am (SUBCOMMANDS): Add 'size'.
* po/guix/POTFILES.in: Add guix/scripts/size.scm.
* tests/size.scm: New file.
* doc/guix.texi (Packages with Multiple Outputs): Add xref to "Invoking guix
size".
(Invoking guix size): New node.
(Invoking guix gc): Add index for "closure" and xref to the above.
* doc/contributing.texi (Submitting Patches): Use @enumerate for the check
list. Add item about 'guix size'.
* guix/scripts/build.scm (package-with-source)[tarball-base-name]: Gracefully
handle file names that lack an extension.
Pass #:recursive? #t to 'download-to-store'.
* guix/download.scm (download-to-store): Add #:recursive? parameter and pass
it to 'add-to-store'.
* doc/guix.texi (Invoking guix build): Add an example of --with-source with a
directory.
* guix/scripts/environment.scm (guix-environment): Call 'parse-command-line'
outside of 'with-store'. This allows things like --help to run even if the
daemon is not running.
Fixes <http://bugs.gnu.org/20722>.
Reported by Eric Bavier <ericbavier@openmailbox.org>.
* guix/scripts/system.scm (copy-item): Check whether DEST exists and remove it
if it does.
* guix/import/cabal.scm: New file.
* guix/import/hackage.scm: Update to use the new Cabal parsing module.
* tests/hackage.scm: Update tests.
* guix/scripts/import/hackage.scm: Add new '--cabal-environment' and '--stdin'
options.
* doc/guix.texi: ... and document them.
* Makefile.am (MODULES): Add 'guix/import/cabal.scm',
'guix/import/hackage.scm' and 'guix/scripts/import/hackage.scm'.
(SCM_TESTS): Add 'tests/hackage.scm'.
* guix/scripts/import.scm (show-help): Add newline before a list of
importers.
* guix/scripts/lint.scm (show-help): Split a long description line.
* guix/scripts/package.scm (show-help): Improve docstrings for --install
and --remove options.
* guix/scripts/system.scm (show-help): Format actions the same way as
guix commands and importers are formatted.
* guix/scripts/lint.scm (call-with-accumulated-warnings): New procedure.
(with-accumulated-warnings): New macro.
(check-source): Add 'try-uris' and use it. Emit warnings only upon
failure.
* guix/scripts/environment.scm (%options): Add "ad-hoc" option.
(show-help): Display help for "--ad-hoc".
(packages+propagated-inputs): New procedure.
(guix-environment): Create ad hoc environment when asked.
* doc/guix.texi ("invoking guix environment"): Document it.
Fixes <http://bugs.gnu.org/19757>.
* guix/scripts/gc.scm (guix-gc): Convert paths to direct store paths.
* guix/store.scm (direct-store-path): Get rid of subdirectories in store path.
* tests/guix-gc.sh: New tests.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
* guix/ui.scm (load*): Add #:on-error parameter.
[tag, error-string]: New variables.
Wrap 'load' call in 'call-with-prompt'. Pass TAG to 'make-stack'. Honor
ON-ERROR after 'report-load-error' call.
(report-load-error): Change to not exit on error. Make private.
* guix/scripts/system.scm (show-help, %options): Add --on-error.
(guix-system): Use 'load*' and pass it #:on-error.
Fixes <http://bugs.gnu.org/20591>.
Reported by Daniel Pimentel <d4n1@openmailbox.org>.
* guix/scripts/system.scm (install): Copy the closure of GRUB.CFG rather than
that of OS-DIR.
* guix/scripts/system.scm (grub.cfg): Remove.
(perform-action): Call 'operating-system-grub.cfg' with the empty list as
the 2nd argument when ACTION is 'init.
Suggested by Mark H Weaver <mhw@netris.org>.
* guix/scripts/system.scm (install): Add 'chown' and 'chmod' calls for TARGET
when running as root, and warn otherwise.
* guix/ui.scm (make-user-module, load*): New procedures.
* guix/scripts/system.scm (%user-module): Define in terms of
'make-user-module'.
(read-operating-system): Define in terms of load*'.
* guix/scripts/package.scm (search-path-environment-variables): Add #:kind
parameter. Pass it to 'environment-variable-definition'.
(display-search-paths): Add #:kind parameter and pass it to
'search-path-environment-variables'.
(%options): Add an optional parameter for "--search-paths".
(guix-package)[process-query]: Handle it.
* tests/guix-package-net.sh: Adjust existing test.
* tests/guix-package.sh: Adjust existing tests and add new test.
* doc/guix.texi (Invoking guix package): Document it.
* guix/scripts/publish.scm (show-help, %options): Add --listen.
(getaddrinfo*): New procedure.
(%default-options): Add 'address'.
(open-server-socket): Replace 'addr' and 'port' with 'address', a
sockaddr.
(guix-publish): Adjust accordingly. Augment "publishing" message with
the actual address.
* doc/guix.texi (Invoking guix publish): Document it.
* guix/scripts/publish.scm (show-help): Add --user.
(%options): Likewise.
(run-publish-server): Change 'port' parameter to 'socket'. Pass
#:socket instead of #:addr and #:port to 'run-server'. Update caller
accordingly.
(open-server-socket, gather-user-privileges): New procedures.
(guix-publish): Use them. Force %PRIVATE-KEY and %PUBLIC-KEY early
on. Warn when running as root.
* doc/guix.texi (Invoking guix publish): Document --user.
Previously, code using directly (guix build download) was still affected
by <http://bugs.gnu.org/15368>. This includes source derivations, the
'guix download' command, and (guix gnu-maintenance).
'guix substitute' was unaffected since it used (guix http-client), which
already had the fix.
* guix/http-client.scm (open-socket-for-uri): Remove.
(http-fetch): Remove #:buffered? argument to 'open-socket-for-uri';
use 'setvbuf' instead.
* guix/scripts/substitute.scm (fetch): Likewise.
* guix/build/download.scm (open-socket-for-uri): New procedure, taken
from guix/http-client.scm, but without the #:buffered? parameter.
* guix/search-paths.scm (search-path-definition): New procedure.
* guix/scripts/environment.scm (for-each-search-path): Rename to...
(evaluate-input-search-paths): ... this. Remove 'proc' and 'pure?'
parameters, and return directly the list of search-path/value pairs.
(create-environment): Use 'for-each' and 'evaluate-input-search-paths'
instead of 'for-each-search-path'.
(show-search-paths): Use 'for-each', 'search-path-definition', and
'evaluate-search-paths' instead of 'for-each-search-path'.
This allows 'guix environment' to correctly handle non-directory
and/or pattern search-path specifications, such as that for
'XML_CATALOG_FILES'.
* guix/scripts/environment.scm (for-each-search-path): Use
'evaluate-search-paths' instead of 'search-path-as-list' & co.
* guix/scripts/package.scm (evaluate-search-paths): New procedure, with
most of the code formerly in 'search-path-environment-variables'.
(search-path-environment-variables): Use it.
* guix/scripts/package.scm (user-friendly-profile): New procedure.
(search-path-environment-variables): Remove 'profile' local variable.
(display-search-paths): Explicitly call 'user-friendly-profile' for
the argument to 'search-path-environment-variables'.
(guix-package)[process-query]: Likewise.
Discussed in <http://bugs.gnu.org/20255>.
* guix/packages.scm (sexp->search-path-specification): New variable.
* guix/profiles.scm (<manifest-entry>)[search-paths]: New field.
(package->manifest-entry): Initialize it.
(manifest->gexp): Match it. Wrap #$deps in (propagated-inputs ...).
Emit (search-paths ...). Increment version.
(find-package): New procedure.
(sexp->manifest)[infer-search-paths]: New procedure.
Use it to initialize the 'search-paths' field for versions 0 and 1.
Add case for version 2.
* guix/scripts/package.scm (search-path-environment-variables)[manifest-entry->package]:
Remove.
Use 'manifest-entry-search-paths' instead of 'manifest-entry->package'
plus 'package-native-search-paths'.
* tests/profiles.scm ("profile-manifest, search-paths"): New test.
In practice we would not leak much since we reconnect after ~100
requests (with nginx running on hydra.gnu.org.)
* guix/scripts/substitute.scm (http-multiple-get): Call 'close-port'
before 'connect'.
* guix/scripts/refresh.scm (guix-refresh): Use 'specification->package'
instead of 'find-packages-by-name'. This allows users to specify
things like "qt-4.8.6".
* doc/guix.texi (Invoking guix refresh): Add an example.
* guix/scripts/package.scm (%options): Add the '--do-not-upgrade' option.
(show-help): Document it.
(options->installable): Add 'do-not-upgrade-regexps' variable.
Use it in 'packages-to-upgrade'.
* doc/guix.texi (Invoking guix package): Document the '--do-not-upgrade'
option.
* guix/profiles.scm (ghc-package-cache-file): New procedure.
(profile-derivation): Add 'ghc-package-cache?' keyword argument. If true
(the default), add the result of 'ghc-package-cache-file' to 'inputs'.
* guix/scripts/package.scm (guix-package)[process-actions]: Pass
#:ghc-package-cache? to 'profile-generation'.
* tests/packages.scm ("--search-paths with pattern"): Likewise.
* tests/profiles.scm ("profile-derivation"): Likewise.
* guix/scripts/system.scm (read-operating-system): Replace error
handling code by a call to 'report-load-error'.
* guix/ui.scm (report-load-error): New procedure.
* guix/scripts/package.scm (delete-matching-generations): Remove call to
'exit' when PATTERN is "0". Call 'leave' instead of 'exit'
when (null-list? number).
Fixes <http://bugs.gnu.org/19978>.
Reported by taylanbayirli@gmail.com (Taylan Ulrich Bayırlı/Kammer).
* guix/scripts/package.scm (delete-matching-generations): Warn when
CURRENT is in NUMBERS, and always remove it before calling
'delete-generations'.
* tests/guix-package.sh: Add --switch-generation=2 invocation before
--delete-generations=3 invocation.
Add --delete-generations=1.. test case.
* guix/scripts/package.scm (delete-matching-generations): New procedure,
with code formerly found...
(guix-package)[process-actions]: ... here. Use it.
Remove 'current-generation-number'.
Before that it would sort them by name only, so the order in which two
packages with the same name but a different version would appear was
non-deterministic.
Reported by Tomáš Čech <sleep_walker@gnu.org>.
* guix/scripts/package.scm (find-packages-by-description)[version<?]:
New variable.
Change the 2nd argument to 'sort' to use 'string-compare' and resort
to 'version<?' when P1 and P2 have the same name.
Before that, 'guix package -s foobarbaz' would display only one package
when several match but they have the same location (which is common when
using 'inherit'.)
The original rationale was given at
<http://lists.gnu.org/archive/html/bug-guix/2013-01/msg00280.html> but
it was arguably misguided because it led to "real" packages being
hidden.
Reported by Tomáš Čech <sleep_walker@gnu.org>.
* guix/scripts/package.scm (find-packages-by-description)[same-location?]:
Remove.
Remove call to 'delete-duplicates'.
* guix/store.scm (set-build-options): Rename #:binary-caches to
#:substitute-urls. Actually pass it in 'pairs' under the
"substitute-urls" key.
* guix/scripts/substitute-binary.scm (%cache-url): Add comment for
"untrusted-substitute-urls".
This fixes a regression introduced in commit 536c3ee.
* guix/profiles.scm (ca-certificate-bundle): When MANIFEST is empty,
make a trivial derivation.
* guix/scripts/package.scm (guix-package)[process-actions]: Pass
#:ca-certificate-bundle? to 'profile-generation'.
* tests/packages.scm ("--search-paths with pattern"): Likewise.
* tests/profiles.scm ("profile-derivation"): Likewise.
Before that, any profile generation built when '-p' is used would
effectively become a permanent GC root because the symlink in
/var/guix/gcroots/auto would point directly to /gnu/store/...-profile.
* guix/scripts/package.scm (maybe-register-gc-root): Rename to...
(register-gc-root): ... this. Remove conditional, and replace call to
'canonicalize-path' with (string-append (getcwd) "/" ...).
(guix-package): Call 'register-gc-root' only if PROFILE is different
from %CURRENT-PROFILE.
* tests/guix-package.sh: Add test case.
Before that, if two users on the same machine ran 'guix pull', the
second one would have the "Guix already up to date" message and their
~/.config/guix/latest link would be left unchanged---effectively
preventing them from updating.
* guix/scripts/pull.scm (build-and-install): Install the 'latest'
symlink regardless of whether TO-DO? is true or false.
Suggested by Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>.
* guix/scripts/offload.scm (register-gc-root)[script]: Replace
'false-if-exception' with a finer-grain 'system-error handler.
Provide the name of MACHINE in 'leave' error message.
Suggested by Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>.
* guix/scripts/offload.scm (remote-pipe): Remove unneeded 'catch'.
(machine-load): Check the exit value upon (close-pipe pipe). Call
'warning' when it is non-zero.
* guix/scripts/environment.scm (for-each-search-path): Iterate over all
derivation output paths.
(packages->transitive-inputs): Process inputs that specify an output, too.
* guix/scripts/lint.scm (%options) <--checkers>: Remove 'arg-handler'
parameter, and return a single value.
(guix-lint)[parse-options]: Remove 'arg-handler' parameter from
handlers. Remove second seed to 'args-fold*'.
* tests/guix-lint.sh: Add test.
Before that it would check all the URIs of each package.
* guix/scripts/lint.scm (validate-uri): Really return #f on failure and
#t otherwise.
(check-source): Replace 'for-each' with 'any'.
* guix/ui.scm (report-error): Export.
* guix/scripts/system.scm (read-operating-system): Report syntax errors
using standard GNU format. Report other errors using 'display-error'.
Reported by Andreas Enge <andreas@enge.fr>.
* guix/scripts/package.scm (with-null-error-port): New macro.
(search-path-environment-variables): Wrap 'search-path-as-list' call
in 'with-null-error-port'.
* guix/scripts/substitute-binary.scm (narinfo-signature->canonical-sexp):
Change "~a" to "~s" in error message.
(%signature-line-rx): Remove.
(narinfo-sha256): Use 'string-contains' instead of 'regexp-exec', and
'string-take' instead of 'match:substring'.
* guix/scripts/package.scm (search-path-environment-variables): Add
local 'files' variable.
* tests/packages.scm ("--search-paths with pattern"): New test.
* guix/scripts/lint.scm (run-checkers): Check
whether (current-error-port) is a tty, and print the package being
checked and the checker currently running when it is.
This will handle the new 'file-type' and 'file-pattern' fields correctly.
* guix/scripts/package.scm (search-path-environment-variables)[search-path-definition]:
Rewrite in terms of 'search-path-as-list'.
This would not work when /boot is a separate partition, as reported by
Nikita Karetnikov <nikita@karetnikov.org> in <http://bugs.gnu.org/19220>.
This fixes a regression introduced in 39d1f82.
* gnu/build/install.scm (install-grub): Copy GRUB.CFG instead of
symlinking it, as was the case before 39d1f82.
* gnu/build/vm.scm (register-grub.cfg-root): Add 'grub.cfg' parameter.
Make it a permanent GC root instead of an indirect GC root.
(initialize-hard-disk): Adjust accordingly.
* guix/scripts/system.scm (install-grub*): Replace use of
'add-indirect-root' by the addition of a permanent GC root in
%GC-ROOTS-DIRECTORY.
Fixes <http://bugs.gnu.org/19279>.
Fixes a regression introduced in cc7fa59.
Reported by Tomas Cech <tcech@suse.cz>.
* guix/scripts/system.scm (install): Fix order of arguments to 'lift'
and 'lift2'.
Appending to "raw" args broke optional parameters in 'guix package -I'
and 'guix package -A', and possibly other places. Therefore, switch to
parsing each set of options on its own and append resulting alists
together afterwards.
* guix/scripts/archive.scm (parse-options-from): Rename from
(parse-options) and add explicit argument. New form of (parse-options)
using its old algorithm via -from function.
* guix/scripts/build.scm: Ditto.
* guix/scripts/environment.scm: Ditto.
* guix/scripts/package.scm: Ditto.
* guix/scripts/system.scm: Ditto.
* tests/guix-package.sh: Add test.
* doc/guix.texi (Invoking guix build): Make it clear that the options
are parsed independently.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
Fixes <http://bugs.gnu.org/19160>.
* guix/scripts/system.scm (install-grub*): Make /boot/grub/grub.cfg an
indirect GC root.
* gnu/build/install.scm (install-grub): Make TARGET a symlink.
* gnu/build/vm.scm (register-grub.cfg-root): New procedure.
(initialize-hard-disk): Use it.
* guix/scripts/substitute-binary.scm (fetch): Change "unresponsive" to
"somewhat slow". I'm being told that the former is often
misunderstood as "broken".
Fixes <http://bugs.gnu.org/18534>.
* guix/scripts/pull.scm (with-environment-variable, with-PATH): New
macros.
(temporary-directory, first-directory, interned-then-deleted): New
procedures.
(unpack): Rewrite to do the unpacking in the current process rather
than as a separate derivation.
(%self-build-file): New variable.
(build-from-source): New procedure.
(build-and-install): Use it.
* guix/build/pull.scm (build-guix): Rename 'tarball' argument to
'source'. Remove #:tar and #:gzip parameters, as well as 'tar'
invocation. Remove 'scandir' invocation. Wrap body in
'with-directory-excursion'.
* build-aux/build-self.scm: New file.
* Makefile.am (EXTRA_DIST): Add it.
* gnu/system/vm.scm (system-qemu-image/shared-store): Add
#:disk-image-size and #:full-boot? parameters and honor them. Pass
'#:copy-inputs? full-boot?', and change #:inputs argument.
* guix/scripts/system.scm (system-derivation-for-action): Pass
#:disk-image-size to 'system-qemu-image/shared-store'.
* doc/guix.texi (Invoking guix system): Mention use of '--image-size' in
conjunction with '--full-boot'.
* guix/scripts/lint.scm (starts-with-abbreviation?): New procedure.
(check-synopsis-style)[check-start-with-package-name]: Use it.
* tests/lint.scm ("synopsis: start with abbreviation"): New test.
* guix/scripts/lint.scm (package-name-regexp): New procedure.
(check-synopsis-style)[check-start-with-package-name]: Use it instead
of 'string-prefix-ci?'.
* tests/lint.scm ("synopsis: start with package name prefix"): New test.
Thanks to Mark H. Weaver <mhw@netris.org> for insightful discussions
and suggestions.
* guix/packages.scm (<package>)[graft]: New field.
(patch-and-repack): Invoke 'package-derivation' with #:graft? #f.
(package-source-derivation): Likewise. Do not use (%guile-for-build)
in call to 'patch-and-repack', and we could end up using a grafted
Guile.
(expand-input): Likewise, also for 'package-cross-derivation' call.
(package->bag): Add #:graft? parameter. Honor it. Use 'strip-append'
instead of 'package-full-name'.
(input-graft, input-cross-graft, bag-grafts, package-grafts): New
procedures.
(package-derivation, package-cross-derivation): Add #:graft? parameter
and honor it.
* gnu/packages/bootstrap.scm (package-with-bootstrap-guile): Add
recursive call on 'graft'.
* guix/build-system/gnu.scm (package-with-explicit-inputs,
package-with-extra-configure-variable, static-package): Likewise.
(gnu-build): Use the ungrafted Guile to avoid full rebuilds.
(gnu-cross-build): Likewise.
* guix/build-system/cmake.scm (cmake-build): Likewise.
* guix/build-system/glib-or-gtk.scm (glib-or-gtk-build): Likewise.
* guix/build-system/perl.scm (perl-build): Likewise.
* guix/build-system/python.scm (python-build): Likewise.
* guix/build-system/ruby.scm (ruby-build): Likewise.
* guix/build-system/trivial.scm (guile-for-build): Likewise.
* tests/packages.scm ("package-derivation, direct graft",
"package-cross-derivation, direct graft", "package-grafts,
indirect grafts", "package-grafts, indirect grafts, cross",
"package-grafts, indirect grafts, propagated inputs",
"package-derivation, indirect grafts"): New tests.
("bag->derivation", "bag->derivation, cross-compilation"): Wrap in
'parameterize'.
* doc/guix.texi (Security Updates): New node.
(Invoking guix build): Document --no-graft.
* guix/scripts/environment.scm (show-help): Align --pure and
--search-paths with other long options; add 'newline' call before
'show-bug-report-information' call.
Alex Kost