75710da667
Merge branch 'master' into core-updates
2015-09-13 21:28:01 +02:00
194c7f95f1
gnu: Add FLANN.
...
* gnu/packages/maths.scm (flann): New variable.
2015-09-06 19:34:09 +02:00
96c4621056
gnu: Use 'install-file' instead of 'mkdir-p' and 'copy-file' in obvious cases.
...
* gnu/packages/bioinformatics.scm (bedtools, bowtie, bwa, hisat, samtools,
plink, star): Use 'install-file' instead of 'mkdir-p' + 'copy-file'.
* gnu/packages/check.scm (catch-framework): Likewise.
* gnu/packages/code.scm (global): Likewise.
* gnu/packages/emacs.scm (magit-svn, haskell-mode, emacs-pdf-tools):
Likewise.
* gnu/packages/engineering.scm (fastcap, fasthenry): Likewise.
* gnu/packages/gnuzilla.scm (nss): Likewise.
* gnu/packages/guile.scm (guile-minikanren): Likewise.
* gnu/packages/java.scm (swt): Likewise.
* gnu/packages/make-bootstrap.scm (%static-binaries): Likewise.
* gnu/packages/maths.scm (lpsolve): Likewise.
* gnu/packages/mp3.scm (mpc123): Likewise.
* gnu/packages/ninja.scm (ninja): Likewise.
* gnu/packages/python.scm (python-numpy, python-pyparsing): Likewise.
* gnu/packages/screen.scm (dtach): Likewise.
* gnu/packages/synergy.scm (synergy): Likewise.
* gnu/packages/textutils.scm (utf8proc): Likewise.
* gnu/packages/version-control.scm (git-test-sequence): Likewise.
* gnu/packages/wicd.scm (wicd): Likewise.
2015-08-29 01:25:08 +02:00
c01876b1af
gnu: pspp: Update to 0.8.5.
...
* gnu/packages/maths.scm (pspp)[source]: Update to 0.8.5.
[native-inputs]: Add TEXINFO.
2015-07-21 01:12:34 +02:00
e881752c39
gnu packages: Clean up synopses and descriptions.
...
* gnu/packages/admin.scm, gnu/packages/algebra.scm, gnu/packages/audio.scm,
gnu/packages/backup.scm, gnu/packages/base.scm, gnu/packages/bittorrent.scm,
gnu/packages/code.scm, gnu/packages/compression.scm,
gnu/packages/databases.scm, gnu/packages/enchant.scm,
gnu/packages/firmware.scm, gnu/packages/fonts.scm,
gnu/packages/freedesktop.scm, gnu/packages/games.scm, gnu/packages/gd.scm,
gnu/packages/gl.scm, gnu/packages/gnome.scm, gnu/packages/gsasl.scm,
gnu/packages/gstreamer.scm, gnu/packages/gtk.scm, gnu/packages/guile.scm,
gnu/packages/haskell.scm, gnu/packages/language.scm,
gnu/packages/lesstif.scm, gnu/packages/libreoffice.scm,
gnu/packages/linux.scm, gnu/packages/llvm.scm, gnu/packages/maths.scm,
gnu/packages/mcrypt.scm, gnu/packages/mit-krb5.scm, gnu/packages/mp3.scm,
gnu/packages/ncdu.scm, gnu/packages/networking.scm, gnu/packages/ntp.scm,
gnu/packages/ocaml.scm, gnu/packages/openbox.scm, gnu/packages/pdf.scm,
gnu/packages/perl.scm, gnu/packages/pretty-print.scm,
gnu/packages/pulseaudio.scm, gnu/packages/python.scm,
gnu/packages/rdesktop.scm, gnu/packages/rdf.scm, gnu/packages/ruby.scm,
gnu/packages/slang.scm, gnu/packages/slim.scm, gnu/packages/telephony.scm,
gnu/packages/tls.scm, gnu/packages/tmux.scm, gnu/packages/tre.scm,
gnu/packages/unrtf.scm, gnu/packages/version-control.scm,
gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wget.scm,
gnu/packages/xdisorg.scm, gnu/packages/xfce.scm, gnu/packages/xiph.scm:
Fix typos. Trim long lines. Add missing periods in the end of sentences.
Use double spaces between sentences. Remove trailing whitespaces.
2015-07-18 13:05:01 +03:00
7c125ce023
gnu packages: Avoid description lines with leading "(".
...
* gnu/packages/curl.scm (curl): Reformat description to avoid a line
beginning with "(" because such lines break font-lock highlighting
in Emacs.
* gnu/packages/flashing-tools.scm (dfu-programmer): Likewise.
* gnu/packages/games.scm (gnugo): Likewise.
* gnu/packages/gnome.scm (json-glib): Likewise.
* gnu/packages/image.scm (jbig2dec): Likewise.
* gnu/packages/maths.scm (units): Likewise.
* gnu/packages/pdf.scm (mupdf): Likewise.
* gnu/packages/web.scm (perl-encode-locale): Likewise.
* gnu/packages/wordnet.scm (wordnet): Likewise.
* gnu/packages/xml.scm (libxml2):Likewise.
2015-07-18 13:05:01 +03:00
a17d45641b
gnu: Add deal.II.
...
* gnu/packages/maths.scm (dealii, dealii-openmpi): New variables.
* gnu/packages/patches/dealii-p4est-interface.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-29 15:34:36 -05:00
a7f0141452
gnu: Add SLEPc.
...
* gnu/packages/maths.scm (slepc, slepc-complex, slepc-openmpi)
(slepc-complex-openmpi): New variables.
2015-06-29 15:34:36 -05:00
8c94c886f6
gnu: Add arpack-ng-openmpi.
...
* gnu/packages/maths.scm (arpack-ng-openmpi): New variable.
2015-06-29 15:34:36 -05:00
9a899cceab
gnu: petsc: Upgrade to 3.6.0.
...
* gnu/packages/maths.scm (petsc): Upgrade to 3.6.0.
* gnu/packages/patches/petsc-fix-threadcomm.patch: Delete patch.
* gnu-system.am (dist_patch_DATA): Remove it.
2015-06-29 15:34:36 -05:00
cec86422b7
gnu: Add MUMPS.
...
* gnu/packages/maths.scm (mumps, mumps-metis, mumps-openmpi)
(mumps-metis-openmpi): New variables.
* gnu/packages/patches/mumps-build-parallelism.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-29 15:34:36 -05:00
aa75ad0097
gnu: Add METIS.
...
* gnu/packages/maths.scm (metis): New variable.
2015-06-29 15:34:36 -05:00
700ff22219
gnu: Add p4est.
...
* gnu/packages/maths.scm (p4est, p4est-openmpi): New variables.
2015-06-29 15:34:36 -05:00
e1ff597a64
gnu: Add ScaLAPACK.
...
* gnu/packages/maths.scm (scalapack): New variable.
2015-06-29 15:34:36 -05:00
cf0ec6c46e
gnu: scotch, pt-scotch: Build esmumps libraries.
...
* gnu/packages/maths.scm (scotch)[arguments]: Add 'build-esmumps
phase. Install esmumps libraries and headers in 'install phase.
(pt-scotch)[arguments]: Build ptesmumps in 'build phase. Add
make parallelism.
2015-06-29 15:34:36 -05:00
d6602ee9d4
gnu: scotch, pt-scotch: Use modify-phases.
...
* gnu/packages/maths.scm (scotch, pt-scotch)[arguments]: Use modify-phases.
2015-06-29 15:34:36 -05:00
6c7985408f
gnu: Update scotch to 6.0.4.
...
* gnu/packages/maths.scm (scotch): Update to 6.0.4.
[arguments]: Add -fPIC to CFLAGS.
* gnu/packages/patches/scotch-test-threading.patch: Adjust patch for a
new set of test fixes.
* gnu/packages/patches/pt-scotch-build-parallelism.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-29 15:34:36 -05:00
19afbea136
gnu: Replace versioned gfortran inputs with just "gfortran".
...
* gnu/packages/julia.scm (julia)[inputs]: Replace "gfortran-4.8" with
"gfortran".
* gnu/packages/machine-learning.scm (randomjungle)[native-inputs]: Likewise.
* gnu/packages/maths.scm (arpack-ng, lapack, petsc, superlu)
(superlu-dist, openblas, openspecfun, atlas)[inputs]: Likewise.
(octave)[native-inputs]: Likewise.
(gmsh)[propagated-inputs]: Likewise.
* gnu/packages/mpi.scm (openmpi)[inputs]: Likewise.
* gnu/packages/python.scm (python-numpy-bootstrap)[native-inputs]: Likewise.
* gnu/packages/python.scm (python-scipy)[native-inputs]: Likewise.
* gnu/packages/statistics.scm (r)[inputs]: Replace "gfortran-4.9" with
"gfortran".
2015-06-25 18:28:54 +02:00
180a93c72a
gnu: gsl: Fix poly test on i686.
...
* gnu/packages/patches/gsl-poly-test-fix-pt1.patch,
gnu/packages/patches/gsl-poly-test-fix-pt2.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/maths.scm (gsl)[source]: Add patches.
2015-06-20 01:38:56 -04:00
0004c5904c
packages: Make 'location' field innate.
...
* guix/packages.scm (<package>)[location]: Add 'innate' property.
* guix/build-system/gnu.scm (static-package): Remove 'loc' parameter and
'location' field.
* gnu/packages/autotools.scm (autoconf-wrapper): Remove 'location' field.
* gnu/packages/commencement.scm (gnu-make-boot0, diffutils-boot0, gcc-final):
Likewise.
* gnu/packages/cross-base.scm (cross): Likewise.
* gnu/packages/emacs.scm (emacs-no-x, emacs-no-x-toolkit): Likewise.
* gnu/packages/make-bootstrap.scm (tarball-package): Likewise.
* gnu/packages/maths.scm (petsc-complex): Likewise.
2015-06-11 23:33:32 +02:00
9aafbc0c13
gnu: Add wxmaxima.
...
* gnu/packages/maths.scm (wxmaxima): New variable.
2015-05-26 10:24:11 -04:00
77af7b2407
gnu: maxima: Update to 5.36.1.
...
* gnu/packages/patches/maxima-defsystem-mkdir.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (maxima): Update to 5.36.1. Add patch.
2015-05-26 10:23:38 -04:00
7f18257bea
gnu: Add lpsolve.
...
* gnu/packages/maths.scm (lpsolve): New variable.
2015-05-20 23:21:50 +02:00
5b5ea159ac
gnu: openblas: Disable DYNAMIC_ARCH on MIPS.
...
* gnu/packages/maths.scm (openblas)[arguments]: Do not pass DYNAMIC_ARCH when
building for MIPS. Also make non-substitutable for MIPS.
2015-05-20 13:30:24 +02:00
ecf28847b2
gnu: openblas: Update to 0.2.14.
...
* gnu/packages/maths.scm (openblas): Update to 0.2.14.
2015-05-15 13:53:30 +02:00
1ec78e9d71
gnu: octave: Add fftw, arpack, and glu inputs.
...
* gnu/packages/maths.scm (octave)[inputs]: Add fftw, fftwf, arpack,
and glu.
[description]: Wrap to 80 columns.
2015-05-11 10:10:00 -05:00
af5b817ea9
gnu: openblas: build for all supported CPUs.
...
* gnu/packages/maths.scm (openblas)[arguments]: Add "DYNAMIC_ARCH=1" to
make flags. Remove "#:substitutable? #f".
2015-03-26 07:54:55 +01:00
87db65507e
Remove unused patchelf inputs.
...
* gnu/packages/maths.scm (lapack, gmsh), gnu/packages/ssh.scm (libssh): Remove
unused patchelf from native-inputs.
2015-03-23 13:30:06 -04:00
61a529b421
gnu: Add double-conversion.
...
* gnu/packages/maths.scm (double-conversion): New variable.
2015-03-23 10:38:06 +01:00
2742f87e17
gnu: Add SuiteSparse.
...
* gnu/packages/maths.scm (suitesparse): New variable.
2015-03-23 10:19:45 +01:00
e73b49fbd6
gnu: Add openblas.
...
* gnu/packages/maths.scm (openblas): New variable.
2015-03-23 10:08:28 +01:00
166191b377
gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'.
...
* gnu/packages/avr.scm, gnu/packages/compression.scm,
gnu/packages/curl.scm, gnu/packages/cyrus-sasl.scm,
gnu/packages/databases.scm, gnu/packages/firmware.scm,
gnu/packages/flex.scm, gnu/packages/fontutils.scm,
gnu/packages/gd.scm, gnu/packages/ghostscript.scm,
gnu/packages/gnunet.scm, gnu/packages/graphics.scm,
gnu/packages/hugs.scm, gnu/packages/image.scm,
gnu/packages/linux.scm, gnu/packages/mail.scm,
gnu/packages/maths.scm, gnu/packages/mit-krb5.scm,
gnu/packages/python.scm, gnu/packages/rdf.scm,
gnu/packages/ssh.scm, gnu/packages/tcl.scm,
gnu/packages/xdisorg.scm, gnu/packages/xiph.scm,
gnu/packages/yasm.scm, gnu/packages/zip.scm: Use 'non-copyleft'
instead of 'bsd-style'.
2015-03-14 19:27:14 +01:00
c12efc72cf
gnu: Add glm.
...
* gnu/packages/maths.scm (glm): New variable.
Co-authored-by: John Darrington <john@darrington.wattle.id.au>
2015-03-14 17:39:58 +01:00
12ed1216de
gnu: hdf5: Add input zlib.
...
* gnu/packages/maths.scm (hdf5): Add input zlib.
2015-03-13 00:15:47 +01:00
40029cbe30
gnu: hdf5: Combine all outputs into one.
...
* gnu/packages/maths.scm (hdf5): Combine the outputs "out", "bin", "lib" and
"include" into "out".
(gmsh, octave): Adapt list of inputs.
2015-03-12 23:59:49 +01:00
e62be58fc3
gnu: Add openspecfun.
...
* gnu/packages/maths.scm (openspecfun): New variable.
2015-03-10 23:39:12 +01:00
e1605e36a8
gnu: Add openlibm.
...
* gnu/packages/maths.scm (openlibm): New variable.
2015-03-10 23:38:55 +01:00
279663efa5
gnu: Add muparser.
...
* gnu/packages/maths.scm (muparser): New variable.
2015-03-05 08:01:15 +01:00
1289062522
Merge branch 'core-updates'.
2015-03-04 14:07:23 +01:00
32158110b0
gnu: octave: Update to 3.8.2.
...
* gnu/packages/maths.scm (octave): Update to 3.8.2.
2015-03-04 16:45:23 +08:00
f586c87705
gnu: Add 'file-name' fields for github source tarballs without a name.
...
* gnu/packages/aarddict.scm (aarddict), gnu/packages/algebra.scm (arb),
gnu/packages/audio.scm (jack-2, lvtk),
gnu/packages/bioinformatics.scm (bedops, bedtools, bowtie),
gnu/packages/game-development.scm (tiled),
gnu/packages/games.scm (minetest-data, minetest, retroarch),
gnu/packages/jrnl.scm (jrnl), gnu/packages/kde.scm (qjson),
gnu/packages/libevent.scm (libuv), gnu/packages/linux.scm (pflask),
gnu/packages/mail.scm (offlineimap, libetpan),
gnu/packages/maths.scm (arpack-ng), gnu/packages/ninja.scm (ninja),
gnu/packages/nutrition.scm (gourmet),
gnu/packages/python.scm (python-cairocffi), gnu/packages/rdf.scm (lrdf),
gnu/packages/ruby.scm (ruby-i18n), gnu/packages/sxiv.scm (sxiv): Add
'file-name' field to origin.
2015-02-28 09:49:01 -05:00
865a69ddc8
gnu: Add arpack-ng.
...
* gnu/packages/maths.scm (arpack-ng): New variable.
2015-02-20 14:26:48 +01:00
85f4190221
gnu: gmsh: Add glu to inputs.
...
* gnu/packages/maths.scm (gmsh): Add glu to inputs.
2014-12-27 11:18:29 -05:00
01480b9e1c
gnu: atlas: Remove MIPS from 'supported-systems'.
...
* gnu/packages/maths.scm (atlas): Drop support for "mips64el-linux".
2014-12-08 09:54:34 +01:00
af89a66735
gnu: atlas: Try to fix build on MIPS.
...
* gnu/packages/maths.scm (atlas): Add MIPS specific configure flags.
2014-11-23 15:37:29 +01:00
f15615b119
gnu: atlas: Make it non-substitutable.
...
Suggested by Federico Beffa <beffa@ieee.org>.
* gnu/packages/maths.scm (atlas)[arguments]: Pass #:substitutable? #f.
[description]: Adjust accordingly.
2014-10-28 10:17:55 +01:00
35b9e4232c
gnu: Some cleanup based on lint checkers.
...
* gnu/packages/admin.scm, gnu/packages/aidc.scm, gnu/packages/algebra.scm,
gnu/packages/apr.scm, gnu/packages/avahi.scm, gnu/packages/backup.scm,
gnu/packages/base.scm, gnu/packages/calcurse.scm, gnu/packages/cdrom.scm,
gnu/packages/check.scm, gnu/packages/compression.scm, gnu/packages/cook.scm,
gnu/packages/crypto.scm, gnu/packages/cryptsetup.scm, gnu/packages/curl.scm,
gnu/packages/cyrus-sasl.scm, gnu/packages/databases.scm,
gnu/packages/doxygen.scm, gnu/packages/dwm.scm, gnu/packages/elf.scm,
gnu/packages/emacs.scm, gnu/packages/feh.scm, gnu/packages/file.scm,
gnu/packages/fish.scm, gnu/packages/flex.scm, gnu/packages/fltk.scm,
gnu/packages/fontutils.scm, gnu/packages/games.scm, gnu/packages/gcal.scm,
gnu/packages/gcc.scm, gnu/packages/geeqie.scm, gnu/packages/ghostscript.scm,
gnu/packages/gimp.scm, gnu/packages/gl.scm, gnu/packages/glib.scm,
gnu/packages/gnome.scm, gnu/packages/gnunet.scm, gnu/packages/gnupg.scm,
gnu/packages/gperf.scm, gnu/packages/grub.scm, gnu/packages/gsasl.scm,
gnu/packages/gtk.scm, gnu/packages/guile-wm.scm, gnu/packages/guile.scm,
gnu/packages/hurd.scm, gnu/packages/icu4c.scm, gnu/packages/image.scm,
gnu/packages/imagemagick.scm, gnu/packages/irssi.scm, gnu/packages/kde.scm,
gnu/packages/libdaemon.scm, gnu/packages/libevent.scm,
gnu/packages/libidn.scm, gnu/packages/libusb.scm, gnu/packages/linux.scm,
gnu/packages/lout.scm, gnu/packages/lsh.scm, gnu/packages/lsof.scm,
gnu/packages/lua.scm, gnu/packages/maths.scm, gnu/packages/mcrypt.scm,
gnu/packages/mp3.scm, gnu/packages/netpbm.scm, gnu/packages/noweb.scm,
gnu/packages/ocaml.scm, gnu/packages/openssl.scm, gnu/packages/pcre.scm,
gnu/packages/pdf.scm, gnu/packages/pkg-config.scm,
gnu/packages/pretty-print.scm, gnu/packages/python.scm, gnu/packages/qt.scm,
gnu/packages/rsync.scm, gnu/packages/scheme.scm, gnu/packages/scrot.scm,
gnu/packages/sdl.scm, gnu/packages/skribilo.scm, gnu/packages/ssh.scm,
gnu/packages/stalonetray.scm, gnu/packages/tcl.scm, gnu/packages/tcsh.scm,
gnu/packages/telephony.scm, gnu/packages/texlive.scm, gnu/packages/tor.scm,
gnu/packages/valgrind.scm, gnu/packages/version-control.scm,
gnu/packages/vim.scm, gnu/packages/vpn.scm, gnu/packages/w3m.scm,
gnu/packages/web.scm, gnu/packages/wordnet.scm, gnu/packages/xiph.scm,
gnu/packages/xml.scm, gnu/packages/xorg.scm, gnu/packages/zile.scm,
gnu/packages/zip.scm, gnu/packages/zsh.scm [synopsis, description]: Adjust
according to lint checkers.
* gnu/packages/fltk.scm (fltk)[source]: Wrap long line in uri.
* /gnu/packages/xiph.scm (libogg, libtheora, vorbis-tools)[source]: Same.
2014-10-26 13:03:53 -05:00
ec322be248
gnu: Add ATLAS.
...
* gnu/packages/maths.scm (atlas): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-10-26 15:16:06 +01:00
3dcd78109c
gnu: pspp: Upgrade to 0.8.4.
...
* gnu/packages/maths.scm (pspp): Upgrade to 0.8.4.
2014-10-03 19:52:50 +02:00
182d6311c2
gnu: Add dionysus.
...
* gnu/packages/maths.scm (dionysus): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-09-29 00:16:28 +02:00
f36afe4d05
gnu: maxima: Install .el files in the right place, and help find Gnuplot.
...
* gnu/packages/maths.scm (maxima): Remove Tcl from 'inputs'. Add
'post-install' phase.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-09-27 11:22:58 +02:00
df354a771d
gnu: maxima: Update to 5.34.1 and add dependencies.
...
* gnu/packages/maths.scm (maxima): Update to 5.34.1 which fixes a bug in
the plotting capabilities present in the previous version. Add Gnuplot
and Tcl/Tk to 'inputs'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-09-24 09:35:44 +02:00
b5b73a8269
Use #:prefix instead of #:renamer with 'symbol-prefix-proc'.
...
* gnu/packages/abiword.scm, gnu/packages/admin.scm, gnu/packages/aidc.scm,
gnu/packages/backup.scm, gnu/packages/bittorrent.scm,
gnu/packages/boost.scm, gnu/packages/compression.scm,
gnu/packages/cryptsetup.scm, gnu/packages/curl.scm,
gnu/packages/cyrus-sasl.scm, gnu/packages/dc.scm, gnu/packages/emacs.scm,
gnu/packages/fonts.scm, gnu/packages/fontutils.scm, gnu/packages/geeqie.scm,
gnu/packages/ghostscript.scm, gnu/packages/gimp.scm,
gnu/packages/gkrellm.scm, gnu/packages/gl.scm, gnu/packages/glib.scm,
gnu/packages/gnome.scm, gnu/packages/gnunet.scm, gnu/packages/gnupg.scm,
gnu/packages/gnutls.scm, gnu/packages/gnuzilla.scm, gnu/packages/gsasl.scm,
gnu/packages/gtk.scm, gnu/packages/gv.scm, gnu/packages/image.scm,
gnu/packages/indent.scm, gnu/packages/inkscape.scm,
gnu/packages/lesstif.scm, gnu/packages/links.scm, gnu/packages/lisp.scm,
gnu/packages/lsh.scm, gnu/packages/lsof.scm, gnu/packages/maths.scm,
gnu/packages/mp3.scm, gnu/packages/openssl.scm, gnu/packages/ots.scm,
gnu/packages/pciutils.scm, gnu/packages/pcre.scm, gnu/packages/pdf.scm,
gnu/packages/pulseaudio.scm, gnu/packages/python.scm, gnu/packages/slim.scm,
gnu/packages/ssh.scm, gnu/packages/texlive.scm, gnu/packages/vim.scm,
gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wv.scm,
gnu/packages/xiph.scm, gnu/packages/xml.scm, gnu/packages/xorg.scm,
gnu/packages/yasm.scm, gnu/packages/zip.scm,
guix/build/cmake-build-system.scm, guix/build/perl-build-system.scm,
guix/build/python-build-system.scm, guix/download.scm: Replaces uses of
#:renamer and 'symbol-prefix-proc' with #:prefix.
2014-09-23 18:52:29 -04:00
516e93f8a6
gnu: Fix typos.
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* gnu/packages/cdrom.scm (cdparanoia): Double space in description.
* gnu/packages/maths.scm (hdf5): Double space in synopsis.
2014-09-19 15:31:19 +04:00
9e771e3bb6
gnu: Adjust synopses as recommended by 'guix lint'.
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Remove leading articles and trailing periods in package synopses.
2014-09-13 15:50:30 +02:00
c5779c931b
gnu: Synchronize GNU package descriptions with upstream.
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These are mostly two-space-after-end-of-sentence-period changes
resulting from commit 3a09e1d2
2014-09-13 15:36:07 +02:00
66fdf54587
gnu: glpk: Update to 4.55.
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* gnu/packages/maths.scm (glpk): Update to 4.55.
2014-09-11 16:43:08 +02:00
c3cf9d36e4
Merge branch 'bug-17853'
2014-07-13 23:44:55 +02:00
8731e52749
gnu: Add maxima.
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* gnu/packages/maths.scm (maxima): New variable.
2014-07-05 16:16:03 +02:00
221ed17a58
gnu: Adjust yet more packages to GLib "bin" split.
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* gnu/packages/maths.scm (pspp): Add glib:bin to 'native-inputs'.
* gnu/packages/gnome.scm (gconf, gnome-vfs, libgnome, libgnomeui,
libbonoboui): Likewise.
(libbonobo, libgnomecanvas, libgnomeprint): Comment on why glib:bin.
* gnu/packages/gtk.scm (gtksourceview): Likewise.
2014-07-02 13:32:59 -05:00
93c3de921a
gnu: hdf5: Fix source download location.
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* gnu/packages/maths.scm (hdf5): Use "release" directory and not the "current"
directory for the source, which does not break on new upstream releases.
2014-05-28 16:04:08 +02:00
5698b8b82c
gnu: Add gsegrafix and dependent libraries.
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* gnu/packages/math.scm (gsegrafix): New variable.
* gnu/packages/gtk.scm (pangox-compat): New variable.
* gnu/packages/gnome.scm (libidl, orbit2, libbonobo, gconf, gnome-mime-data,
gnome-vfs, libgnome, libart-lgpl, libgnomecanvas, libgnomeui, libglade,
libgnomeprint, libgnomeprintui, libbonoboui): New variables.
2014-05-26 18:19:55 +02:00
16ecf3ff4a
gnu: Edit synopses of petsc packages.
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* gnu/packages/maths.scm (petsc) [synopsis]: Shorten.
(petsc-complex,petsc-openmpi,petsc-complex-openmpi) [synopsis]:
Repeat synopsis from petsc package with extensions. [description]: Remove.
2014-05-20 09:53:19 -05:00
a54aefead6
gnu: Add superlu-dist package.
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* gnu/packages/maths.scm (superlu-dist): New variable.
* gnu/packages/patches/superlu-dist-scotchmetis.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2014-05-19 00:15:11 -05:00
6acb4adb34
gnu: Add pt-scotch package.
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* gnu/packages/maths.scm (pt-scotch): New variable.
2014-05-19 00:15:11 -05:00
f8ed036a31
gnu: Add scotch package.
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* gnu/packages/maths.scm (scotch): New variable.
* gnu/packages/patches/scotch-test-threading.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2014-05-19 00:15:11 -05:00
7e0c23fb3e
gnu: pspp: Upgrade to 0.8.3
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* gnu/packages/maths.scm (pspp): Update to 0.8.3.
2014-05-11 13:42:49 +02:00
d8c7eeb996
gnu: Add petsc-openmpi.
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* gnu/packages/maths.scm (petsc-openmpi): New variable.
(petsc-complex-openmpi): New variable.
2014-05-08 12:42:17 -05:00
10b11968c8
gnu: petsc: Clean some more leaked chroot references
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* gnu/packages/maths.scm (petsc)[arguments]: Scrub some
config-generated header files before build. Only remove files if
they exist.
2014-05-08 12:42:17 -05:00
0e2672aee3
gnu: Add missing import in (gnu packages maths).
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* gnu/packages/maths.scm: Use (guix utils), which was needed since
b9100e2f
2014-05-04 11:15:30 +02:00
f5d5a346db
gnu: Add missing copyright line
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* gnu/packages/maths.scm: Add copyright line missing from 3de01d3
2014-05-02 14:25:17 -05:00
f258212df5
gnu: petsc: Add input superlu.
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* gnu/packages/maths.scm (petsc): Configure with superlu support.
2014-05-02 14:25:17 -05:00
183e44ae44
gnu: Add superlu
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* gnu/packages/maths.scm (superlu): New variable
2014-05-02 14:25:17 -05:00
b9100e2f11
gnu: Add petsc
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* gnu/packages/maths.scm (petsc): New variable.
(petsc-complex): New variable.
* gnu/packages/patches/petsc-fix-threadcomm.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2014-05-01 15:27:30 -05:00
edf684ef99
gnu: gmsh: Fix typos
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* gnu/packages/maths.scm (gmsh): Fix typo and space aftern
end-of-sentence.
2014-04-30 14:56:52 -05:00
3de01d3fa1
gnu: Add gmsh
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* gnu/packages/maths.scm (gmsh): New variable
2014-04-30 11:39:31 -05:00
06ed59825e
guix: cmake: Add input and package libraries to the rpath, and adapt package
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definitions accordingly.
* guix/build/cmake-build-system.scm (configure): Add flags.
* gnu/packages/maths.scm (lapack): Drop special code.
* gnu/packages/ssh.scm (libssh): Drop special code.
* gnu/packages/slim.scm (slim): Drop special code and enable shared library.
Co-authored-by: Eric Bavier <bavier@member.fsf.org>
2014-04-27 11:35:26 +02:00
57e544e8f7
gnu: lapack: Augment library rpath
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* gnu/packages/maths.scm (lapack) [arguments]: New post-installation
phase to augment the rpath of installed libraries.
2014-04-08 23:10:42 -05:00
8de3a57821
gnu: lapack: Build shared libraries
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* gnu/packages/maths.scm (lapack) [arguments]: Add -DBUILD_SHARED_LIBS to
#:configure-flags
2014-04-07 14:44:57 -05:00
574e86f9cf
gnu: Synchronize synopses and descriptions with the Womb.
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* gnu/packages/gnunet.scm (gnunet): Synchronize description and synopsis
with upstream.
* gnu/packages/maths.scm (units): Likewise.
* gnu/packages/grub.scm (grub): Likewise.
* gnu/packages/pretty-print.scm (enscript): Likewise.
2014-04-06 21:18:13 +02:00
983815c8b9
gnu: units: Upgrade to 2.11.
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* gnu/packages/maths.scm (units): Upgrade to 2.11.
2014-04-03 20:54:16 +02:00
1f1c0aff26
gnu: glpk: Upgrade to 4.54.
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* gnu/packages/maths.scm (glpk): Upgrade to 4.54.
2014-04-03 20:18:25 +02:00
d4bf49b140
gnu: Remove unused lambda arguments and prefer separate phases over
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augmented phases.
* gnu/packages/compression.scm (sharutils) [arguments]: Remove unused
lambda args.
* gnu/packages/gl.scm (mesa) [arguments]: Same
* gnu/packages/fltk.scm [arguments]: Same. Substitute const check
phase with #:tests? #f. Add pre-configure phase.
* gnu/packages/ghostscript.scm (ghostscript) [arguments]: Put makefile
patches in separate phase. Put so steps oinseparate phases.
* gnu/packages/glib.scm (gobject-introspection) [arguments]: Remove
unused lambda args. Put patches in pre-configure phase.
* gnu/packages/gnupg.scm (gnupg) [arguments]: Put patch in
pre-configure phase.
(pius) [arguments]: Delete const #t configure and build phases.
(signing-party) [arguments]: Factor patches into post-unpack phase.
(paperkey) [arguments]: Remove unused lambda args. Factor out
patches into pre-check phase.
* gnu/packages/icu4c.scm [arguments]: Change source dir after standard
unpack phase. Factor configure patches into pre-configure phase.
* gnu/packages/lsof.scm [arguments]: Remove unused lambda args.
Remove unnecessary apply.
* gnu/packages/lvm.scm (lvm2) [arguments]: Factor out patches into
pre-configure phase.
* gnu/packages/libtiff.scm [arguments]: Same
* gnu/packages/maths.scm (hdf5) [arguments]: Same
* gnu/packages/gtk.scm (gtk+-2) [arguments]: Same
* gnu/packages/mp3.scm (libmad) [arguments]: Same
(id3lib) [arguments]: Same
* gnu/packages/python.scm (python-2) [arguments]: Same
* gnu/packages/texlive.scm (texlive) [arguments]: Same
* gnu/packages/pretty-print.scm (a2ps) [arguments]: Same
(trueprint) [arguments]: Same
(source-highlight) [arguments]: Same. Remove unused lambda args.
* gnu/packages/netpbm.scm [arguments]: Remove unused lambda args.
Factor out test patches into pre-check phase. Condense calls to
substitute*
* gnu/packages/openldap.scm [arguments]: Factor out libtool copy into
post-configure phases. [synopsis] Remove package name.
* gnu/packages/ssh.scm (openssh) [arguments]: Factor out patches into
separate phases.
* gnu/packages/tcsh.scm [arguments]: Factor out test patches into
pre-check phase.
* gnu/packages/version-control.scm (git) [arguments]: Factor out
patches into post-configure phase.
* gnu/packages/vim.scm [arguments]: Same. [synopsis] Remove package
name.
* gnu/packages/vpn.scm (openconnect) [arguments]: Put configure flags
in #:configure-flags
2014-03-31 10:34:17 -05:00
7ee3f1a208
gnu: Add hdf5.
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* gnu/packages/maths.scm (hdf5): New variable.
* gnu/packages/maths.scm (octave): New input hdf5.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-02-16 23:35:37 +01:00
668c06acfc
gnu: Add GNU Octave.
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* gnu/packages/maths.scm (octave): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-01-30 22:00:55 +01:00
73fed4f868
gnu: Add gnuplot
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* gnu/packages/maths.scm (gnuplot): New variable
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-01-26 21:16:55 +01:00
566146abba
gnu: lapack: Update to 3.5.0.
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* gnu/packages/maths.scm (lapack): Update to 3.5.0.
2014-01-26 13:04:03 +01:00
e7d6f7bfa0
gnu: pspp: Upgrade to 0.8.2
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* gnu/packages/maths.scm (pspp): Update to 0.8.2.
* gnu/packages/patches/pspp-tests.patch: Deleted.
* gnu-system.am: Removed pspp-tests.patch from the manifest.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2014-01-15 21:27:41 +01:00
e6a5ce8e67
gnu: pspp: Enabled build of the gui
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* gnu/packages/math.scm (pspp): Removed the --without-gui flag
and added the necessary inputs to build it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2013-12-02 13:51:02 +01:00
79c311b81c
gnu: Synchronize descriptions with 'gnumaint'.
2013-12-01 22:33:23 +01:00
1dba64079c
gnu: gettext: Rename binding to 'gnu-gettext'.
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* gnu/packages/gettext.scm (gettext): Rename to...
(gnu-gettext): ... this. This is used to work around the circular
dependency introduced in commit c42a4b7
2013-11-20 22:12:49 +01:00
f392980041
gnu: pspp: Add input cairo.
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* gnu/packages/maths.scm (pspp): Add cairo and further necessary inputs.
* gnu/packages/patches/pspp-tests.patch: New file, thanks to
John Darrington <john@darrington.wattle.id.au>.
* gnu-system.am (dist_patch_DATA): Register patch.
2013-11-18 21:12:27 +01:00
6a9957545c
gnu: lapack: Use origin snippet to remove the non-free files.
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* gnu/packages/maths.scm (lapack): Add 'snippet' field with contents of
former 'remove-non-free-files' phase; remove that phase.
2013-11-07 23:07:45 +01:00
da95c8170a
gnu: Add LAPACK.
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* gnu/packages/maths.scm (lapack): New variable.
2013-11-07 08:20:11 +00:00
b92eee75b1
gnu: Add GLPK.
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* gnu/packages/maths.scm (glpk): New variable.
2013-10-22 20:24:33 +02:00
487da56570
gnu: gsl: Update to 1.16.
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* gnu/packages/maths.scm (gsl): Update to 1.16, disable parallel tests
leading to a failure in vector.
2013-10-13 16:26:12 +02:00
a22dc0c49a
Synchronize package descriptions with the Womb.
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* gnu/packages/algebra.scm,
gnu/packages/aspell.scm,
gnu/packages/autotools.scm,
gnu/packages/base.scm,
gnu/packages/bash.scm,
gnu/packages/bison.scm,
gnu/packages/cdrom.scm,
gnu/packages/cflow.scm,
gnu/packages/compression.scm,
gnu/packages/cpio.scm,
gnu/packages/cppi.scm,
gnu/packages/ddrescue.scm,
gnu/packages/dejagnu.scm,
gnu/packages/ed.scm,
gnu/packages/emacs.scm,
gnu/packages/fdisk.scm,
gnu/packages/freeipmi.scm,
gnu/packages/gawk.scm,
gnu/packages/gcal.scm,
gnu/packages/gcc.scm,
gnu/packages/gdb.scm,
gnu/packages/gdbm.scm,
gnu/packages/gettext.scm,
gnu/packages/ghostscript.scm,
gnu/packages/global.scm,
gnu/packages/gnunet.scm,
gnu/packages/gnupg.scm,
gnu/packages/gnutls.scm,
gnu/packages/gperf.scm,
gnu/packages/gprolog.scm,
gnu/packages/groff.scm,
gnu/packages/grub.scm,
gnu/packages/gsasl.scm,
gnu/packages/guile.scm,
gnu/packages/gv.scm,
gnu/packages/help2man.scm,
gnu/packages/idutils.scm,
gnu/packages/indent.scm,
gnu/packages/less.scm,
gnu/packages/libidn.scm,
gnu/packages/libsigsegv.scm,
gnu/packages/libunistring.scm,
gnu/packages/lightning.scm,
gnu/packages/linux.scm,
gnu/packages/lsh.scm,
gnu/packages/m4.scm,
gnu/packages/mail.scm,
gnu/packages/maths.scm,
gnu/packages/multiprecision.scm,
gnu/packages/nano.scm,
gnu/packages/ncurses.scm,
gnu/packages/nettle.scm,
gnu/packages/ocrad.scm,
gnu/packages/oggvorbis.scm,
gnu/packages/parted.scm,
gnu/packages/plotutils.scm,
gnu/packages/pth.scm,
gnu/packages/readline.scm,
gnu/packages/recutils.scm,
gnu/packages/rush.scm,
gnu/packages/scheme.scm,
gnu/packages/screen.scm,
gnu/packages/shishi.scm,
gnu/packages/smalltalk.scm,
gnu/packages/system.scm,
gnu/packages/texinfo.scm,
gnu/packages/time.scm,
gnu/packages/unrtf.scm,
gnu/packages/version-control.scm,
gnu/packages/wdiff.scm,
gnu/packages/wget.scm,
gnu/packages/which.scm,
gnu/packages/xnee.scm,
gnu/packages/zile.scm: Change value of the 'description' field to that
of the Womb.
2013-10-09 16:14:23 +02:00
d6f10ca3fe
gnu: units: Update to 2.02.
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* gnu/packages/maths.scm (units): Update to 2.02.
2013-09-27 22:05:08 +02:00
78c7e3449f
gnu: pspp: Update to 0.8.1.
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* gnu/packages/maths.scm (pspp): Update to 0.8.1.
2013-09-25 11:08:16 +02:00
71e0f28856
gnu: gsl: Disable numerically unstable test on i686.
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* gnu/packages/maths.scm (gsl): Disable test.
2013-08-31 12:18:53 +02:00
88bd1804a2
gnu: gsl: Move from module algebra to maths.
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* gnu/packages/algebra.scm (gsl): Move variable from here...
* gnu/packages/maths.scm (gsl): ...to here.
2013-08-29 15:42:52 +02:00
c9dfa3c721
gnu: Add pspp.
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* gnu/packages/maths.scm (pspp): New variable.
* THANKS: Thank John Darrington for help with debugging.
2013-08-24 15:11:02 +02:00
8f8b24512a
gnu: Add units.
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* gnu/packages/maths.scm: New module.
* gnu-system.am (GNU_SYSTEM_MODULES): Add module.
2013-08-24 10:51:56 +02:00
Ludovic Courtès