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Author SHA1 Message Date
ng0 d2b51c08fd
gnu: Add python-defusedxml. 
* gnu/packages/xml.scm (python-defusedxml): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-08 12:40:06 -04:00
Feng Shu 72fa66674d
gnu: Add you-get. 
* gnu/packages/video.scm (you-get): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-08 15:32:23 +02:00
Arun Isaac 181170c6ee
gnu: octave: Build with gl2ps support. 
* gnu/packages/maths.scm (octave)[inputs]: Add gl2ps.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-08 15:24:37 +02:00
Arun Isaac 725d8d2c08
gnu: Add gl2ps. 
* gnu/packages/gl.scm (gl2ps): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-08 15:23:41 +02:00
Ricardo Wurmus 1d65b5379b
gnu: r-vegan: Update to 2.4-3. 
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-3.
[arguments]: Remove build phase "revert-test-deletion".
[native-inputs]: Remove "r-vegan-delete-tests-patch".
 2017-04-08 10:25:50 +02:00
Ricardo Wurmus 1c8ee3fcc2
gnu: r-stringi: Update to 1.1.5. 
* gnu/packages/statistics.scm (r-stringi): Update to 1.1.5.
 2017-04-08 10:25:50 +02:00
Leo Famulari 4653341b23
gnu: khal: Update to 0.9.5. 
* gnu/packages/calendar.scm (khal): Update to 0.9.5.
 2017-04-07 22:04:51 -04:00
Mathieu Othacehe abf0880a67
vm: Add missing module. 
* gnu/build/vm.scm (define-module): Use module (guix build syscalls).

It fixes the following warnings during guix build :

gnu/build/vm.scm:233:3: warning: possibly unbound variable `mount'
gnu/build/vm.scm:238:3: warning: possibly unbound variable `umount'
gnu/build/vm.scm:268:8: warning: possibly unbound variable `mount'
gnu/build/vm.scm:276:8: warning: possibly unbound variable `umount'
gnu/build/vm.scm:315:4: warning: possibly unbound variable `mount'
gnu/build/vm.scm:323:4: warning: possibly unbound variable `umount'

This was not possible until the previous commit because we had to be sure
that Guile core implementation of 'mount' and 'umount' was used in
initrd context.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-07 23:30:39 +02:00
ng0 cf47a8a51d
gnu: dovecot-trees: Update to 2.1.0. 
* gnu/packages/mail.scm (dovecot-trees): Update to 2.1.0.
(source): Change to use 'url-fetch'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-07 23:30:38 +02:00
Ricardo Wurmus d10fa5c7ff
gnu: Add intel-gpu-tools. 
* gnu/packages/admin.scm (intel-gpu-tools): New variable.
 2017-04-07 23:00:53 +02:00
Vasile Dumitrascu d71b758f3a
gnu: emacs-symon: Update to 20160630. 
* gnu/packagages/emacs.scm (emacs-symon): Update to 20160630 (this is
the latest tag available from the upstream).
[source]: Use github instead of melpa.
[home-page]: Update.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2017-04-07 20:22:29 +03:00
humanitiesNerd 350cfccb06
gnu: Add emacs-adaptive-wrap. 
Suggested-by Ivan Vilata i Balaguer <ivan@selidor.net>.
Fixes <https://bugs.gnu.org/26367>.

* gnu/packages/emacs.scm (emacs-adaptive-wrap): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2017-04-07 20:22:29 +03:00
Alex Kost b0dd3436ed
gnu: emacs-debbugs: Update to 0.14. 
* gnu/packages/emacs.scm (emacs-debbugs): Update to 0.14.
 2017-04-07 20:22:29 +03:00
Ludovic Courtès b25d3bd973
gnu: perf: Add support for C++ symbol demangling. 
* gnu/packages/linux.scm (perf)[inputs]: Add libiberty.
 2017-04-07 17:37:46 +02:00
Mathieu Othacehe f214d470d7
gnu: ratpoison: Update to 1.4.9. 
* gnu/packages/ratpoison.scm (ratpoison): Update to 1.4.9.
[inputs]: Remove libxinerama. Add libxrandr.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-04-07 10:01:54 -04:00
Leo Famulari 6cfb860a7a
gnu: guitarix: Disable webkit features. 
The only version of webkit supported by guitarix is unmaintained and contains a
large number of security vulnerabilities, and should be removed from Guix.

* gnu/packages/audio.scm (guitarix)[inputs]: Remove webkitgtk/gtk+-2.
 2017-04-07 09:37:14 -04:00
Efraim Flashner d5a3e8f019
gnu: myrepos: Use 'modify-phases' syntax. 
* gnu/packages/version-control.scm (myrepos)[arguments]: Use
'modify-phases' syntax.
 2017-04-07 16:16:14 +03:00
Efraim Flashner d46e9fcb2c
gnu: myrepos: Update to 1.20170129. 
* gnu/packages/version-control.scm (myrepos): Update to 1.20170129.
[source]: Source tarballs have been removed from Github, use
git-download to download from upstream repository.
[home-page]: Use https.
 2017-04-07 16:16:13 +03:00
Efraim Flashner ecc39b3f55
gnu: gnubik: Update to 2.4.3. 
* gnu/packages/games.scm (gnubik): Update to 2.4.3.
 2017-04-07 16:16:13 +03:00
Ben Woodcroft 37982693ca
gnu: vsearch: Update to 2.4.3. 
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.4.3.
 2017-04-07 21:35:07 +10:00
Leo Famulari fbd6fb1a9d
gnu: qemu: Update to 2.8.1 [security fixes]. 
Fixes CVE-2016-{9602,9603} and CVE-2017-{2615,2620,2630,5667,5931}.

* gnu/packages/qemu.scm (qemu): Update to 2.8.1.
* gnu/packages/patches/qemu-CVE-2017-2615.patch,
gnu/packages/patches/qemu-CVE-2017-2620.patch,
gnu/packages/patches/qemu-CVE-2017-2630.patch,
gnu/packages/patches/qemu-CVE-2017-5667.patch,
gnu/packages/patches/qemu-CVE-2017-5931.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2017-04-07 00:53:02 -04:00
Leo Famulari 0715c0e69c
gnu: surf: Update to 2.0. 
* gnu/packages/suckless.scm (surf): Update to 2.0.
[inputs]: Replace webkitgtk/gtk+-2 with webkitgtk.
 2017-04-06 22:44:07 -04:00
Ludovic Courtès 6b6aca9b36
gnu: flann: Move .mex file to a separate "octave" output. 
That way the closure of flann:out is down from 1 GiB
to 290 MiB.

* gnu/packages/maths.scm (flann)[outputs]: New field.
[arguments]: Add 'set-octave-directory' phase.
 2017-04-07 00:17:16 +02:00
Leo Famulari 3be437398e
gnu: webkitgtk: Update to 2.16.1. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.16.1.
 2017-04-06 17:24:57 -04:00
Ricardo Wurmus fe418cc5b2
gnu: armadillo: Change license to ASL 2.0. 
Armadillo versions 7.800 and onwards are licensed under the Apache License
2.0.

* gnu/packages/maths.scm (armadillo)[license]: Change to ASL 2.0.
 2017-04-06 15:42:18 +02:00
Marius Bakke 2aa78c8f04
gnu: re2: Update to 2017-04-01. 
* gnu/packages/regex.scm (re2): Update to 2017-04-01.
 2017-04-06 15:07:55 +02:00
Marius Bakke fdcc9163d5
gnu: feh: Update to 2.18.3. 
* gnu/packages/image-viewers.scm (feh): Update to 2.18.3.
 2017-04-06 15:05:40 +02:00
Marius Bakke 2c273a82f3
gnu: libusb: Update to 1.0.21. 
* gnu/packages/libusb.scm (libusb): Update to 1.0.21.
[home-page]: Update to new URL.
 2017-04-06 15:03:07 +02:00
Marius Bakke 05b662663d
gnu: libmtp: Update to 1.1.13 [security fixes]. 
* gnu/packages/libusb.scm (libmtp): Update to 1.1.13.
 2017-04-06 14:58:05 +02:00
Ricardo Wurmus c9dccf7917
gnu: r-sourcetools: Update to 0.1.6. 
* gnu/packages/statistics.scm (r-sourcetools): Update to 0.1.6.
 2017-04-06 14:39:23 +02:00
Ricardo Wurmus e18c731ba0
gnu: r-seqinr: Update to 3.3-6. 
* gnu/packages/bioinformatics.scm (r-seqinr): Update to 3.3-6.
 2017-04-06 14:39:22 +02:00
Ricardo Wurmus 498d2553ed
gnu: Remove armadillo-for-rcpparmadillo. 
This package is no longer useful, because upstream does not keep the tarballs
of older releases.  We use the bundled armadillo sources in the
r-rccparmadillo package instead.

* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Remove variable.
 2017-04-06 14:39:22 +02:00
Ricardo Wurmus 0685fe3c86
gnu: r-rcpparmadillo: Update to 0.7.700.0.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.700.0.0.
[source]: Do not delete bundled armadillo sources, because upstream no longer
hosts previous versions.
[propagated-inputs]: Remove "armadillo-for-rcpparmadillo".
[arguments]: Remove because we no longer need to link with the armadillo
library.
* gnu/packages/bioinformatics.scm (r-deseq2)[arguments]: Remove because we no
longer need to link with armadillo library.
 2017-04-06 14:39:22 +02:00
Ricardo Wurmus 133cba8cb5
gnu: armadillo: Update to 7.800.2. 
* gnu/packages/maths.scm (armadillo): Update to 7.800.2.
 2017-04-06 14:39:22 +02:00
Ricardo Wurmus a3656b11d2
gnu: r-annotationforge: Update to 1.16.1. 
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.16.1.
 2017-04-06 14:39:22 +02:00
Ricardo Wurmus e0d7b31820
gnu: r-shortread: Update to 1.32.1. 
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.32.1.
 2017-04-06 14:39:21 +02:00
Ricardo Wurmus 2cea968e41
gnu: r-s4vectors: Update to 0.12.2. 
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.12.2.
 2017-04-06 14:39:21 +02:00
Ricardo Wurmus 7d05eb2dcc
gnu: r-iranges: Update to 2.8.2. 
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.8.2.
 2017-04-06 14:39:21 +02:00
Ricardo Wurmus e89cf15091
gnu: r-variantannotation: Update to 1.20.3. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.20.3.
 2017-04-06 14:39:21 +02:00
Ricardo Wurmus 3506a62762
gnu: r-limma: Update to 3.30.13. 
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.30.13.
 2017-04-06 14:39:21 +02:00
Ricardo Wurmus 4cd4721dbb
gnu: r-genomicranges: Update to 1.26.4. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.26.4.
 2017-04-06 14:39:20 +02:00
Ricardo Wurmus 69b356efce
gnu: r-annotationdbi: Update to 1.36.2. 
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.36.2.
 2017-04-06 14:39:20 +02:00
Ricardo Wurmus 5cc3b7a548
gnu: r-genomicalignments: Update to 1.10.1. 
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.10.1.
 2017-04-06 14:39:20 +02:00
Ricardo Wurmus 25d8854723
gnu: r-rtracklayer: Update to 1.34.2. 
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.34.2.
 2017-04-06 14:39:20 +02:00
Ricardo Wurmus 9ce6cb082e
gnu: r-genomicfeatures: Update to 1.26.4. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.26.4.
 2017-04-06 14:39:20 +02:00
Ricardo Wurmus 57ac1d2f03
gnu: r-seqminer: Update to 5.7. 
* gnu/packages/bioinformatics.scm (r-seqminer): Update to 5.7.
 2017-04-06 14:39:19 +02:00
Ricardo Wurmus e8bec95e69
gnu: r-maldiquant: Update to 1.16.2. 
* gnu/packages/bioinformatics.scm (r-maldiquant): Update to 1.16.2.
 2017-04-06 14:39:19 +02:00
Ricardo Wurmus 20e97759bf
gnu: r-ranger: Update to 0.7.0. 
* gnu/packages/statistics.scm (r-ranger): Update to 0.7.0.
 2017-04-06 14:39:19 +02:00
Ricardo Wurmus da2260f96c
gnu: r-pbkrtest: Update to 0.4-7. 
* gnu/packages/statistics.scm (r-pbkrtest): Update to 0.4-7.
 2017-04-06 14:39:19 +02:00
Ricardo Wurmus 4328bad2cd
gnu: r-rcppeigen: Update to 0.3.2.9.1. 
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.2.9.1.
 2017-04-06 14:39:19 +02:00
Ricardo Wurmus a977576780
gnu: r-mclust: Update to 5.2.3. 
* gnu/packages/statistics.scm (r-mclust): Update to 5.2.3.
 2017-04-06 14:39:18 +02:00
Ricardo Wurmus 0007e645d9
gnu: r-ggthemes: Update to 3.4.0. 
* gnu/packages/statistics.scm (r-ggthemes): Update to 3.4.0.
 2017-04-06 14:39:18 +02:00
Ricardo Wurmus 47f37fd169
gnu: r-statmod: Update to 1.4.29. 
* gnu/packages/statistics.scm (r-statmod): Update to 1.4.29.
 2017-04-06 14:39:18 +02:00
Ricardo Wurmus 4c7ab0309a
gnu: r-vipor: Update to 0.4.5. 
* gnu/packages/statistics.scm (r-vipor): Update to 0.4.5.
 2017-04-06 14:39:18 +02:00
Ricardo Wurmus 2fe41e0fad
gnu: r-pracma: Update to 2.0.4. 
* gnu/packages/maths.scm (r-pracma): Update to 2.0.4.
 2017-04-06 14:39:18 +02:00
Ricardo Wurmus 2f44ef97a5
gnu: r-mixtools: Update to 1.1.0. 
* gnu/packages/statistics.scm (r-mixtools): Update to 1.1.0.
[propagated-inputs]: Remove "r-boot", add "r-survival".
 2017-04-06 14:39:17 +02:00
Ricardo Wurmus 7a8efc81f8
gnu: r-viridis: Update to 0.4.0. 
* gnu/packages/statistics.scm (r-viridis): Update to 0.4.0.
[propagated-inputs]: Add "r-viridislite".
 2017-04-06 14:39:17 +02:00
Ricardo Wurmus b5d5344f32
gnu: r-viridislite: Update to 0.2.0. 
* gnu/packages/statistics.scm (r-viridislite): Update to 0.2.0.
 2017-04-06 14:39:17 +02:00
Ricardo Wurmus cdadca5e6f
gnu: r-matrixstats: Update to 0.52.1. 
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.52.1.
 2017-04-06 14:39:17 +02:00
Ricardo Wurmus af7a4cc8a8
gnu: r-mvtnorm: Update to 1.0-6. 
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-6.
 2017-04-06 14:39:17 +02:00
Ricardo Wurmus 82b281fe12
gnu: r-e1071: Update to 1.6-8. 
* gnu/packages/statistics.scm (r-e1071): Update to 1.6-8.
 2017-04-06 14:39:16 +02:00
Ricardo Wurmus 1d1fbb7336
gnu: r-sparsem: Update to 1.76. 
* gnu/packages/statistics.scm (r-sparsem): Update to 1.76.
 2017-04-06 14:39:16 +02:00
Ricardo Wurmus fb708a1c74
gnu: r-xml: Update to 3.98-1.6. 
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.6.
 2017-04-06 14:39:16 +02:00
Ricardo Wurmus 1c27bb8f44
gnu: r-rsqlite: Update to 1.1-2. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 1.1-2.
 2017-04-06 14:39:16 +02:00
Ricardo Wurmus 0def707ad8
gnu: r-rmarkdown: Update to 1.4. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.4.
 2017-04-06 14:39:16 +02:00
Ricardo Wurmus ac5e810205
gnu: r-bbmisc: Update to 1.11. 
* gnu/packages/statistics.scm (r-bbmisc): Update to 1.11.
 2017-04-06 14:39:16 +02:00
Ricardo Wurmus f1870aef99
gnu: r-backports: Update to 1.0.5. 
* gnu/packages/statistics.scm (r-backports): Update to 1.0.5.
 2017-04-06 14:39:15 +02:00
Ricardo Wurmus d05e45f33c
gnu: r-multitaper: Update to 1.0-13. 
* gnu/packages/statistics.scm (r-multitaper): Update to 1.0-13.
 2017-04-06 14:39:15 +02:00
Ricardo Wurmus 0fbae8ebca
gnu: r-xml2: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-xml2): Update to 1.1.1.
 2017-04-06 14:39:15 +02:00
Ricardo Wurmus c6e40db528
gnu: r-ade4: Update to 1.7-6. 
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-6.
 2017-04-06 14:39:15 +02:00
Ricardo Wurmus 10ffdb94e4
gnu: r-data-table: Update to 1.10.4. 
* gnu/packages/statistics.scm (r-data-table): Update to 1.10.4.
 2017-04-06 14:39:15 +02:00
Ricardo Wurmus 9e8fac0c45
gnu: r-chron: Update to 2.3-50. 
* gnu/packages/statistics.scm (r-chron): Update to 2.3-50.
 2017-04-06 14:39:14 +02:00
Ricardo Wurmus b8acb5aa46
gnu: r-cluster: Update to 2.0.6. 
* gnu/packages/statistics.scm (r-cluster): Update to 2.0.6.
 2017-04-06 14:39:14 +02:00
Ricardo Wurmus e8988ff9a0
gnu: r-dbi: Update to 0.6-1. 
* gnu/packages/statistics.scm (r-dbi): Update to 0.6-1.
 2017-04-06 14:39:14 +02:00
Ricardo Wurmus 5e0fa201a2
gnu: r-gdtools: Update to 0.1.4. 
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.4.
 2017-04-06 14:39:14 +02:00
Ricardo Wurmus 7267f358a0
gnu: r-stringr: Update to 1.2.0. 
* gnu/packages/statistics.scm (r-stringr): Update to 1.2.0.
 2017-04-06 14:39:14 +02:00
Ricardo Wurmus 5beda28f6b
gnu: r-stringi: Update to 1.1.3. 
* gnu/packages/statistics.scm (r-stringi): Update to 1.1.3.
 2017-04-06 14:39:14 +02:00
Ricardo Wurmus 69a8ed6a12
gnu: r-rcpp: Update to 0.12.10. 
* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.10.
 2017-04-06 14:39:13 +02:00
Ricardo Wurmus 9948b8e24c
gnu: r-digest: Update to 0.6.12. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.12.
 2017-04-06 14:39:13 +02:00
Ricardo Wurmus 344e4741a1
gnu: r-survival: Update to 2.41-3. 
* gnu/packages/statistics.scm (r-survival): Update to 2.41-3.
 2017-04-06 14:39:13 +02:00
Ricardo Wurmus a6dcc78cb0
gnu: r-mgcv: Update to 1.8-17. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-17.
 2017-04-06 14:39:13 +02:00
Ricardo Wurmus 9704bda1b3
gnu: r-matrix: Update to 1.2-8. 
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-8.
 2017-04-06 14:39:12 +02:00
Ricardo Wurmus 9aea2cdaff
gnu: r-lattice: Update to 0.20-35. 
* gnu/packages/statistics.scm (r-lattice): Update to 0.20-35.
 2017-04-06 14:39:12 +02:00
Ricardo Wurmus 7ceb26ee83
gnu: r-rprojroot: Update to 1.2. 
* gnu/packages/statistics.scm (r-rprojroot): Update to 1.2.
 2017-04-06 14:39:12 +02:00
Ricardo Wurmus e15f962fef
gnu: r-htmltable: Update to 1.9. 
* gnu/packages/web.scm (r-htmltable): Update to 1.9.
[propagated-inputs]: Add "r-checkmate" and "r-htmlwidgets".
 2017-04-06 14:39:11 +02:00
Ricardo Wurmus d3812fb233
gnu: r-curl: Update to 2.4. 
* gnu/packages/web.scm (r-curl): Update to 2.4.
 2017-04-06 14:39:11 +02:00
Ricardo Wurmus 4cd07e487e
gnu: r-genomeinfodb: Update to 1.10.3. 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.10.3.
[propagated-inputs]: Add "r-rcurl".
 2017-04-06 14:39:11 +02:00
Ricardo Wurmus acbeb2d56b
gnu: r-xvector: Update to 0.14.1. 
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.14.1.
 2017-04-06 14:39:11 +02:00
Ricardo Wurmus da250f733a
gnu: r-bioccheck: Update to 1.10.1. 
* gnu/packages/bioinformatics.scm (r-bioccheck): Update to 1.10.1.
[propagated-inputs]: Remove "r-knitr" and "r-devtools".
 2017-04-06 14:39:11 +02:00
Ricardo Wurmus d51f05f769
gnu: r-tidyr: Update to 0.6.1. 
* gnu/packages/statistics.scm (r-tidyr): Update to 0.6.1.
[propagated-inputs]: Add "r-tibble".
 2017-04-06 14:39:10 +02:00
Ricardo Wurmus 1db293757b
gnu: r-roxygen2: Update to 6.0.1. 
* gnu/packages/statistics.scm (r-roxygen2): Update to 6.0.1.
[propagated-inputs]: Add "r-commonmark", "r-desc", "r-r6", and "r-xml2".
 2017-04-06 14:39:10 +02:00
Ricardo Wurmus bf6dcf59eb
gnu: Add r-commonmark. 
* gnu/packages/statistics.scm (r-commonmark): New variable.
 2017-04-06 14:39:10 +02:00
Ricardo Wurmus 1cbb07a8e4
gnu: Add r-desc. 
* gnu/packages/statistics.scm (r-desc): New variable.
 2017-04-06 14:39:10 +02:00
Ricardo Wurmus 67deeea41b
gnu: r-readr: Update to 1.1.0. 
* gnu/packages/statistics.scm (r-readr): Update to 1.1.0.
[propagated-inputs]: Remove "r-curl".
 2017-04-06 14:39:09 +02:00
Ricardo Wurmus 33eb555e6f
gnu: r-tibble: Update to 1.3.0. 
* gnu/packages/statistics.scm (r-tibble): Update to 1.3.0.
[propagated-inputs]: Remove "r-assertthat".
 2017-04-06 14:39:09 +02:00
Ricardo Wurmus aad7808526
gnu: r-jsonlite: Update to 1.3. 
* gnu/packages/web.scm (r-jsonlite): Update to 1.3.
 2017-04-06 14:39:09 +02:00
Ricardo Wurmus 538bce2472
gnu: ldc-bootstrap: Delete failing test. 
* gnu/packages/ldc.scm (ldc-bootstrap)[arguments]: Delete failing test in
build phase.
 2017-04-06 14:34:12 +02:00
Ludovic Courtès cb5be6df91
gnu: guile-aspell: Switch to Guile 2.2. 
* gnu/packages/guile.scm (guile-aspell)[inputs]: Replace GUILE-2.0 with
GUILE-2.2.
 2017-04-06 10:45:55 +02:00
Ludovic Courtès 7295087eb1
gnu: guile-aspell: Remove hard-coded "site/2.0" from $(guilesitedir). 
* gnu/packages/guile.scm (guile-aspell)[arguments]: Remove
  #:configure-flags.  Add 'set-guilesitedir' phase.
 2017-04-06 10:42:51 +02:00
Ludovic Courtès 234ea3d653
gnu: guile-aspell: Update to 0.4. 
* gnu/packages/guile.scm (guile-aspell): Update to 0.4.
[arguments] <#:phases>: Adjust 'set-libaspell-file-name' to new source
tree layout.
 2017-04-06 10:37:52 +02:00
Ludovic Courtès 79f912c710
Revert "gnu: openexr: Add IlmBase include sub-directory to 'OpenEXR.pc'." 
This reverts commit 01fe019166,
which was unneeded because IlmBase is already listed as 'Requires'
in 'OpenEXR.pc'.
 2017-04-05 22:45:41 +02:00
Tobias Geerinckx-Rice b28187cd0c
Revert "gnu: bc: Update to 1.07." 
This reverts commit dfee7daedb.  It causes
the linux-libre@4.9 build to hang (command-line usage works fine).
 2017-04-05 21:23:41 +02:00
Kei Kebreau cd381c317b
gnu: Move audacity to audio.scm. 
* gnu/packages/audacity.scm: Remove file and move audacity...
* gnu/packages/audio.scm: ...here.
* gnu/local.mk: Remove reference to removed file.
 2017-04-05 15:08:14 -04:00
Ricardo Wurmus 1108a920bd
gnu: sra-tools: Fix glibc naming conflict. 
* gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Add build phase
"patch-away-glibc-conflict" to fix a definition conflict with glibc 2.25.
 2017-04-05 18:06:51 +02:00
Ricardo Wurmus beebe43176
gnu: sra-tools: Use "modify-phases" syntax. 
* gnu/packages/bioinformatics.scm (sra-tools)[arguments]: Use "modify-phases"
syntax.
 2017-04-05 18:06:51 +02:00
Ben Woodcroft fc5b12879f
gnu: diamond: Update to 0.8.37. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.37.
 2017-04-05 22:49:01 +10:00
Thomas Danckaert 52b2d666ca
gnu: kdevelop: Update to 5.1.0. 
* gnu/packages/kde.scm (kdevelop, kdevplatform): Update to 5.1.0.
 2017-04-05 12:12:34 +02:00
Tobias Geerinckx-Rice dfee7daedb
gnu: bc: Update to 1.07. 
* gnu/packages/algebra.scm (bc): Update to 1.07.
[native-inputs]: Add ed and texinfo.
[arguments]: Use default ‘configure’ phase.
 2017-04-05 03:31:58 +02:00
Tobias Geerinckx-Rice f0bacad682
gnu: bc: Actually use readline. 
* gnu/packages/algebra.scm (bc)[arguments]: Add ‘--with-readline’
to #:configure-flags.
 2017-04-05 03:31:58 +02:00
Tobias Geerinckx-Rice 5894b60491
gnu: algebra: Re-order imports. 
* gnu/packages/algebra.scm: Order imports alphabetically.
 2017-04-05 03:31:58 +02:00
Ludovic Courtès 01fe019166
gnu: openexr: Add IlmBase include sub-directory to 'OpenEXR.pc'. 
* gnu/packages/graphics.scm (openexr)[arguments]: Add
'set-ilmbase-directory-in-pc-file' phase.
 2017-04-05 00:53:03 +02:00
Ludovic Courtès f84011d04a
services: cuirass: Wait for networking. 
* gnu/services/cuirass.scm (cuirass-shepherd-service): Add 'networking'
to 'requirements'.
 2017-04-05 00:53:03 +02:00
Clément Lassieur 8db947169f
gnu: icecat: Use bundled ICU to avoid crashes. 
* gnu/packages/gnuzilla.scm (icecat)[arguments] <#:configure-flags>:
Temporarily comment out "--with-system-icu".
 2017-04-04 20:18:38 +02:00
Clément Lassieur cca906754d
gnu: icecat: Re-enable parallel build. 
* gnu/packages/gnuzilla.scm (icecat)[arguments]: Re-enable parallel build.
 2017-04-04 20:18:38 +02:00
Marius Bakke 33b2520175
gnu: python-django: Specify CPE name. 
* gnu/packages/django.scm (python-django, python2-django)[properties]: Add
"cpe-name".
 2017-04-04 18:30:52 +02:00
Marius Bakke dcc9b6abc7
gnu: python-django: Update to 1.10.7 [fixes CVE-2017-7233 and CVE-2017-7234]. 
* gnu/packages/django.scm (python-django, python2-django): Update to 1.10.7.
 2017-04-04 18:01:32 +02:00
Marius Bakke 4dc12417d2
gnu: gnupg: Update to 2.1.20. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.20.
[source]: Remove patch.
* gnu/packages/patches/gnupg-2.1-fix-Y2038-test-failure.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-04-04 17:46:28 +02:00
Marius Bakke a3dea99107
gnu: python2-cython: Fix build on 32-bit platforms. 
* gnu/packages/python.scm (python-cython, python2-cython)[source]: Add patch.
* gnu/packages/patches/python-cython-fix-tests-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-04-04 17:46:28 +02:00
Mark Meyer 6beaa5a02a
gnu: moc: Add Ogg Vorbis support. 
* gnu/packages/music.scm (moc)[inputs]: Add libogg and libvorbis.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2017-04-04 15:16:25 +02:00
Mark Meyer 0d78e37746
gnu: Add qjackctl. 
* gnu/packages/audio.scm (qjackctl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-04 14:30:00 +02:00
Ludovic Courtès b7506f74df
gnu: glog: Fix name demangling for GCC 5. 
* gnu/packages/patches/glog-gcc-5-demangling.patch: New file.
* gnu/packages/logging.scm (glog)[sources]: Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-04-04 14:30:00 +02:00
Tobias Geerinckx-Rice f49ced6827
gnu: youtube-dl: Update to 2017.04.03. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.04.03.
 2017-04-04 00:17:58 +02:00
Tobias Geerinckx-Rice f751b7596d
gnu: perl-email-simple: Update to 2.213. 
* gnu/packages/mail.scm (perl-email-simple): Update to 2.213.
 2017-04-04 00:17:58 +02:00
Tobias Geerinckx-Rice e26f2c67d6
gnu: perl-email-mime: Update to 1.940. 
* gnu/packages/mail.scm (perl-email-mime): Update to 1.940.
 2017-04-04 00:17:57 +02:00
Tobias Geerinckx-Rice 153ea992e8
gnu: perl-lingua-en-tagger: Update to 0.28. 
* gnu/packages/language.scm (perl-lingua-en-tagger): Update to 0.28.
 2017-04-04 00:17:29 +02:00
Tobias Geerinckx-Rice 5b5b4edfcc
gnu: perl-lingua-en-number-isordinal: Update to 0.05. 
* gnu/packages/language.scm (perl-lingua-en-number-isordinal): Update to 0.05.
 2017-04-04 00:17:29 +02:00
Tobias Geerinckx-Rice e2fb341f8f
gnu: perl-lingua-en-inflect-number: Update to 1.12. 
* gnu/packages/language.scm (perl-lingua-en-inflect-number): Update to 1.12.
 2017-04-04 00:17:29 +02:00
Tobias Geerinckx-Rice 3581c3571a
gnu: perl-lingua-en-inflect: Update to 1.901. 
* gnu/packages/language.scm (perl-lingua-en-inflect): Update to 1.901.
 2017-04-04 00:17:28 +02:00
Tobias Geerinckx-Rice 84f06e540c
gnu: perl-lingua-en-findnumber: Update to 1.32. 
* gnu/packages/language.scm (perl-lingua-en-findnumber): Update to 1.32.
 2017-04-04 00:17:28 +02:00
Tobias Geerinckx-Rice dd0cfb37da
gnu: perl-db-file: Update to 1.840. 
* gnu/packages/databases.scm (perl-db-file): Update to 1.840.
 2017-04-04 00:17:28 +02:00
Tobias Geerinckx-Rice 2273b75154
gnu: perl-dbd-sqlite: Update to 1.54. 
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.54.
 2017-04-04 00:17:28 +02:00
Tobias Geerinckx-Rice 4d40c6aab0
gnu: perl-dbd-pg: Update to 3.5.3. 
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.5.3.
 2017-04-04 00:17:28 +02:00
Muriithi Frederick Muriuki b98d4ec0aa
gnu: Add python-mando-0.3.1 
* gnu/packages/python.scm (python-mando-0.3.1): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-04 00:10:00 +02:00
Thomas Danckaert b4dcfce51b
gnu: Add cifs-utils. 
* gnu/packages/samba.scm (cifs-utils): New variable.
 2017-04-03 21:45:53 +02:00
Marius Bakke 350a30845c
gnu: python-pexpect: Use python-pytest@3.0. 
* gnu/packages/python.scm (python-pexpect, python2-pexpect)[native-inputs]:
Change PYTHON-PYTEST to PYTHON-PYTEST-3.0.
 2017-04-03 19:25:57 +02:00
Marius Bakke 26bad5d7eb
gnu: nss, nss-certs: Update to 3.30. 
* gnu/packages/gnuzilla.scm (nss): Update to 3.30.
* gnu/packages/certs.scm (nss-certs): Update to 3.30.
* gnu/packages/patches/nss-increase-test-timeout.patch: Adjust patch context.
 2017-04-03 19:25:57 +02:00
Marius Bakke cd158a2b77
gnu: python-cython: Update to 0.25.2. 
* gnu/packages/python.scm (python-cython, python2-cython): Update to 0.25.2.
 2017-04-03 19:25:56 +02:00
Kei Kebreau 9a49129651
gnu: audacity: Update to 2.1.3. 
* gnu/packages/audacity.scm (audacity): Update to 2.1.3.
[source]: Fetch gzipped tar archive instead of a zip archive; remove
unnecessary patch.
[native-inputs]: Add autoconf, automake and libtool.
[arguments]: Add autoreconf phase to detect system libraries.
* gnu/packages/patches/audacity-fix-ffmpeg-binding.patch: Delete patch.
* gnu/local.mk: Remove reference to removed patch.
 2017-04-03 11:51:52 -04:00
Arun Isaac 568f977f9c
gnu: emacs-elfeed: Enable tests. 
* gnu/packages/emacs.scm (emacs-elfeed)[arguments]: Add a 'check' phase.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-04-02 23:08:55 -04:00
Leo Famulari b53fa16f9c
gnu: brdf-explorer: Use HTTPS source URL. 
* gnu/packages/graphics.scm (brdf-explorer)[source]: Use HTTPS URL.
 2017-04-02 20:00:52 -04:00
Leo Famulari 7bf837fd43
gnu: Use HTTPS URLs for GitHub home-pages. 
* gnu/packages/bioinformatics.scm, gnu/packages/emacs.scm,
gnu/packages/haskell.scm, gnu/packages/libffi.scm, gnu/packages/lisp.scm,
gnu/packages/ocaml.scm, gnu/packages/openstack.scm, gnu/packages/python.scm,
gnu/packages/ruby.scm, gnu/packages/shells.scm, gnu/packages/statistics.scm,
gnu/packages/xdisorg.scm: Use HTTPS URLs for all packages with a home-page on
GitHub.
 2017-04-02 20:00:51 -04:00
Leo Famulari 9167488490
gnu: jbig2dec: Fix CVE-2016-9601. 
* gnu/packages/patches/jbig2dec-CVE-2016-9601.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (jbig2dec)[source]: Use it.
 2017-04-02 19:38:56 -04:00
Ludovic Courtès 2a0d5de5a9
Merge branch 'core-updates' 2017-04-03 00:13:06 +02:00
Ludovic Courtès 245575eaf3
gnu: guile-git: Install .go files to /site-ccache. 
* gnu/packages/guile.scm (guile-git)[arguments] <bootstrap>: Change
"/ccache" to "/site-ccache" in Makefile.am.
 2017-04-03 00:12:51 +02:00
Marius Bakke 60f37e3cb1
gnu: sddm: Build without greenisland. 
This Wayland compositor is currently abandonware and has known problems.

* gnu/packages/display-managers.scm (sddm)[inputs]: Remove GREENISLAND.
 2017-04-02 23:42:56 +02:00
Ricardo Wurmus 41f6d18fb6
gnu: guitarix: Update to 0.35.3. 
* gnu/packages/audio.scm (guitarix): Update to 0.35.3.
 2017-04-02 18:30:42 +02:00
Kyle Meyer 6800c79701
gnu: notmuch: Update to 0.24.1. 
* gnu/packages/mail.scm (notmuch, python-notmuch, python2-notmuch): Update to
0.24.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-04-02 11:58:08 +02:00
Ben Woodcroft cf1d581464
gnu: khmer: Build with gcc-4. 
* gnu/packages/bioinformatics.scm (khmer)[inputs]: Add gcc-4.9.
 2017-04-02 10:14:17 +10:00
Ben Woodcroft 800a7dd59e
gnu: ruby: Replace with ruby-2.3.4. 
* gnu/packages/ruby.scm (ruby)[replacement]: New field.
(ruby-2.3.4): New variable.
 2017-04-02 08:21:43 +10:00
Ben Woodcroft 22a494ec25
gnu: ruby-2.2: Update to 2.2.7. 
* gnu/packages/ruby.scm (ruby-2.2): Update to 2.2.7.
 2017-04-02 08:20:41 +10:00
Ricardo Wurmus 750e54ecbe
gnu: tuxguitar: Update to 1.4. 
* gnu/packages/music.scm (tuxguitar): Update to 1.4.
[arguments]: Replace build phase "build-editor-utils" with "build-libraries";
install resources to the expected locations.
 2017-04-02 17:25:05 +02:00
Ricardo Wurmus 8723fe23fa
gnu: pd: Run autogen.sh script. 
* gnu/packages/music.scm (pd)[arguments]: Run autogen.sh instead of
plain autoreconf.
 2017-04-02 17:25:05 +02:00
Ricardo Wurmus 4712cbb0c7
gnu: pd: Fix indentation of phases. 
* gnu/packages/music.scm (pd)[arguments]: Fix indentation.
 2017-04-02 17:25:05 +02:00
Ricardo Wurmus 037bf4f4a0
gnu: pd: Update to 0.47-1. 
* gnu/packages/music.scm (pd): Update to 0.47-1.
 2017-04-02 17:25:05 +02:00
Ricardo Wurmus f9b8b54e62
gnu: tuxguitar: Update home page URL. 
* gnu/packages/music.scm (tuxguitar)[home-page]: Update URL.
 2017-04-02 17:25:05 +02:00
Ricardo Wurmus 8dbc5d2368
gnu: setbfree: Update to 0.8.4 
* gnu/packages/music.scm (setbfree): Update to 0.8.4.
 2017-04-02 17:25:05 +02:00
Ricardo Wurmus 7175f4c2c1
gnu: amsynth: Build with LASH support. 
* gnu/packages/music.scm (amsynth)[inputs]: Add lash.
 2017-04-02 17:25:04 +02:00
Ricardo Wurmus 7e0befd45e
gnu: amsynth: Update to 1.7.1. 
* gnu/packages/music.scm (amsynth): Update to 1.7.1.
[native-inputs]: Add intltool.
 2017-04-02 17:25:04 +02:00
Ricardo Wurmus 14fa5bde7e
gnu: samplv1: Update to 0.8.1. 
* gnu/packages/music.scm (samplv1): Update to 0.8.1.
 2017-04-02 17:25:04 +02:00
Ricardo Wurmus 17ca1a39a6
gnu: drumkv1: Update to 0.8.1. 
* gnu/packages/music.scm (drumkv1): Update to 0.8.1.
 2017-04-02 17:25:04 +02:00
Ricardo Wurmus 720de58bf7
gnu: synthv1: Update to 0.8.1. 
* gnu/packages/music.scm (synthv1): Update to 0.8.1.
 2017-04-02 17:25:04 +02:00
Ricardo Wurmus 5feac7b04e
gnu: non-sequencer, non-session-manager: Update to 1.9.5-3.10c31e5. 
* gnu/packages/music.scm (non-sequencer, non-session-manager): Update to
1.9.5-3.10c31e5.
 2017-04-02 17:25:04 +02:00
Ricardo Wurmus 57f1b3b8e7
gnu: lilypond: Update to 2.19.58. 
* gnu/packages/music.scm (lilypond): Update to 2.19.58.
 2017-04-02 17:25:03 +02:00
Ricardo Wurmus 95708ed8d6
gnu: extempore: Update home page. 
* gnu/packages/music.scm (extempore)[home-page]: Use new home page.
 2017-04-02 17:25:03 +02:00
Ricardo Wurmus 0a1513513a
gnu: aria-maestosa: Update to 1.4.13. 
* gnu/packages/music.scm (aria-maestosa): Update to 1.4.13.
 2017-04-02 17:25:03 +02:00
Tobias Geerinckx-Rice 7f661d4909
gnu: btrfs-progs: Update to 4.10.2. 
* gnu/packages/linux.scm (btrfs-progs): Update to 4.10.2.
 2017-04-01 16:13:02 +02:00
Clément Lassieur deb3618810
services: dovecot: Fix passwd and userdb 'args' types. 
* gnu/services/mail.scm (passwd-configuration)[args]
(userdb-configuration)[args]: Change type from 'free-form-args' to
'space-separated-string-list'.
* doc/guix.texi (Mail Services): Document it.
 2017-04-01 14:38:10 +02:00
Ricardo Wurmus 7070088a2d
gnu: yoshimi: Update to 1.5.1. 
* gnu/packages/music.scm (yoshimi): Update to 1.5.1.
 2017-04-02 11:37:11 +02:00
Eric Bavier 9fc221b58c
doc: Fix typos. 
* doc/guix.texi (Build Systems)[ocaml-build-system]: Fix typo.
(Log Rotation)[periodic-rotations]: ditto.
(Database Services)[redis-service-type]: ditto.
(OpenSMTPD Service)[opensmtpd-configuration]: ditto.
(VPN Services)[OpenVPN]: ditto.
(Power management Services)[tlp-configuration]: ditto.
(Git daemon service)[git-daemon-service]: ditto.
(Running GuixSD in a VM): ditto.
* gnu/services/pm.scm (tlp-configuration)[runtime-pm-blacklist]: Fix typo.
* gnu/services/vpn.scm (openvpn-client-configuration)[status]: ditto.
 2017-03-31 20:55:05 -05:00
Ludovic Courtès 985a8599ed
tests: Add GNU dicod test. 
* gnu/tests/dict.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2017-04-01 00:45:18 +02:00
Ludovic Courtès 892d9089a8
tests: Introduce 'simple-operating-system' and use it. 
* gnu/tests.scm (%simple-os): New macro.
(simple-operating-system): New macro.
* gnu/tests/base.scm (%simple-os): Define using 'simple-operating-system'.
(%mcron-os): Use 'simple-operating-system'.
* gnu/tests/mail.scm (%opensmtpd-os): Likewise.
* gnu/tests/messaging.scm (%base-os, os-with-service): Remove.
(run-xmpp-test): Use 'simple-operating-system'.
* gnu/tests/networking.scm (%inetd-os): Likewise.
* gnu/tests/ssh.scm (%base-os, os-with-service): Remove.
(run-ssh-test): Use 'simple-operating-system'.
* gnu/tests/web.scm (%nginx-os): Likewise.
 2017-04-01 00:45:18 +02:00
Huang Ying 9af7ecd959
services: dicod: Allow the configuration of "handlers". 
* gnu/services/dict.scm (<dicod-configuration>)[handlers]: New field.
(<dicod-handler>): New record type.
(<dicod-database>): Add fields.
(dicod-configuration-file): Support convert handlers and enhanced databases.
configuration to config file.
* doc/guix.texi (Miscellaneous Services): Update accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-04-01 00:45:18 +02:00
Mark H Weaver bacc1d26c6
gnu: linux-libre: Update to 4.10.8 [fixes CVE-2017-7184]. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.10.8.
(%linux-libre-hash): Update hash.
 2017-03-31 18:20:54 -04:00
Mark H Weaver 9554e5ae15
gnu: linux-libre@4.9: Update to 4.9.20 [fixes CVE-2017-7184]. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.20.
 2017-03-31 18:20:20 -04:00
Mark H Weaver 232be5bcd7
gnu: linux-libre@4.4: Update to 4.4.59 [fixes CVE-2017-7184]. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.59.
 2017-03-31 18:19:13 -04:00
David Thompson 4299409018
gnu: guile-opengl: Build with Guile 2.2. 
* gnu/packages/gl.scm (guile-opengl): Build with Guile 2.2.
 2017-03-31 13:35:20 -04:00
Tobias Geerinckx-Rice b5b46f87bd
gnu: libtermkey: Update to 0.20. 
gnu/packages/terminals.scm (libtermkey): Update to 0.20.
 2017-03-31 15:33:16 +02:00
Tobias Geerinckx-Rice 32ea65370e
gnu: xonsh: Update to 0.5.9. 
* gnu/packages/shells.scm (xonsh): Update to 0.5.9.
 2017-03-31 15:33:15 +02:00
Tobias Geerinckx-Rice a20d28bb7c
gnu: parallel: Update to 20170322. 
* gnu/packages/parallel.scm (parallel): Update to 20170322.
 2017-03-31 15:33:15 +02:00
David Thompson 80e138750d
gnu: tiled: Update to 0.18.2. 
* gnu/packages/game-development.scm (tiled): Update to 0.18.2.
 2017-03-31 09:25:51 -04:00
Efraim Flashner 823354b2a8
gnu: nano: Update to 2.8.0. 
* gnu/packages/nano.scm (nano): Update to 2.8.0.
 2017-03-31 16:08:04 +03:00
Tobias Geerinckx-Rice ec23833267
gnu: hdparm: Use ‘modify-phases’ syntax. 
* gnu/packages/linux.scm (hdparm): Use ‘modify-phases’.
 2017-03-31 04:06:08 +02:00
Tobias Geerinckx-Rice 02052b2c9b
gnu: hdparm: Expand synopsis and description. 
* gnu/packages/linux.scm (hdparm)[synopsis, description]: Add some more
common uses, more examples, and more objective information.
 2017-03-31 04:06:08 +02:00
Tobias Geerinckx-Rice 0bea8ebe20
gnu: hdparm: Update to 9.51. 
* gnu/packages/linux.scm (hdparm): Update to 9.51.
 2017-03-31 04:06:08 +02:00
Tobias Geerinckx-Rice 8e320dea30
gnu: goffice: Update to 0.10.34. 
* gnu/packages/gnome.scm (goffice): Update to 0.10.34.
 2017-03-31 04:06:07 +02:00
Tobias Geerinckx-Rice 5ecd671731
gnu: gmime: Update to 2.6.23. 
* gnu/packages/mail.scm (gmime): Update to 2.6.23.
 2017-03-31 04:06:06 +02:00
Efraim Flashner 4fbed7494d
gnu: rapidjson: Fix building on aarch64. 
* gnu/packages/web.scm (rapidjson)[arguments]: Add custom phase for
aarch64 to fix -march detection.
 2017-03-31 01:05:28 +03:00
Tobias Geerinckx-Rice 3c2b833334
gnu: freedoom: Update to 0.11.2. 
* gnu/packages/games.scm (freedoom): Update to 0.11.2.
 2017-03-30 23:52:17 +02:00
Ludovic Courtès dca96ad395
gnu: mlocate: Update URLs. 
* gnu/packages/search.scm (mlocate)[source, home-page]: Change URLs to
pagure.{org,io}.
 2017-03-30 23:40:22 +02:00
Ludovic Courtès 402b03e620
gnu: ruby-concurrent: Work around test failure on ARM. 
* gnu/packages/patches/ruby-concurrent-test-arm.patch: New file.
* gnu/packages/ruby.scm (ruby-concurrent)[source](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-03-30 23:40:20 +02:00
Ludovic Courtès aef81a81b8
gnu: guix: Include the aarch64 bootstrap Guile. 
* gnu/packages/package-management.scm (boot-guile-uri): Add case for aarch64.
(guix-0.12.0)[arguments] <copy-bootstrap-guile>: Handle aarch64.
[inputs]: Add "boot-guile/aarch64".
 2017-03-30 23:40:17 +02:00
Leo Famulari 7044301381
gnu: sysstat: Update to 11.4.3. 
* gnu/packages/linux.scm (sysstat): Update to 11.4.3.
 2017-03-30 17:09:29 -04:00
Marius Bakke 84157bb8bf
Merge branch 'master' into core-updates 
Most conflicts are from 6fd52309b8.
 2017-03-30 22:59:53 +02:00
Mark H Weaver 03d0aa8b22
gnu: linux-libre: Update to 4.10.7. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.10.7.
(%linux-libre-hash): Update hash.
 2017-03-30 16:43:00 -04:00
Mark H Weaver f62acf1eb7
gnu: linux-libre@4.9: Update to 4.9.19. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.19.
 2017-03-30 16:42:23 -04:00
Mark H Weaver 7f79df4ae8
gnu: linux-libre@4.4: Update to 4.4.58. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.58.
 2017-03-30 16:41:40 -04:00
Marius Bakke fa63939acb
gnu: chez-scheme: Fix build failure in 'reset-gzip-timestamps' phase. 
* gnu/packages/chez.scm (chez-scheme)[arguments]: Add 'make-manpages-writable'
phase.
 2017-03-30 22:39:24 +02:00
Marius Bakke 2513aac170
gnu: kodi: Update to 18.0_alpha-1-ec5d53d. 
* gnu/packages/kodi.scm (kodi): Update to 18.0_alpha-1-ec5d53d.
[inputs]: Replace LIBYAJL with RAPIDJSON.
 2017-03-30 22:32:46 +02:00
Marius Bakke 4951d2f386
gnu: kodi: Remove silly wrapper script. 
* gnu/packages/kodi.scm (kodi)[arguments]: Add SYSTEM_LDFLAGS in
configure-flags. Remove 'wrap' phase. Enable previously failing tests.
 2017-03-30 22:32:37 +02:00
Marius Bakke 8c0117371a
gnu: kodi: Embed full path to tzdata. 
* gnu/packages/kodi.scm (kodi)[arguments]: Add substitution for tzdata in
'patch-stuff' phase.
[inputs]: Add TZDATA.
 2017-03-30 22:32:37 +02:00
Marius Bakke c3c25082e8
gnu: ceph: Update to 12.0.1. 
* gnu/packages/storage.scm (ceph): Update to 12.0.1.
[arguments]: Disable one new test.
* gnu/packages/patches/ceph-disable-cpu-optimizations.patch: Adjust context.
 2017-03-30 22:32:36 +02:00
Marius Bakke 2657fb6381
gnu: xcb-util-cursor: Update to 0.1.3. 
* gnu/packages/xorg.scm (xcb-util-cursor): Update to 0.1.3.
[source]: Change to bz2 archive.
 2017-03-30 22:31:29 +02:00
Marius Bakke ece42cb381
gnu: libevdev: Update to 1.5.6. 
* gnu/packages/xorg.scm (libevdev): Update to 1.5.6.
 2017-03-30 22:31:29 +02:00
Marius Bakke bdde64b079
gnu: libinput: Update to 1.7.0. 
* gnu/packages/freedesktop.scm (libinput, libinput-minimal): Update to 1.7.0.
 2017-03-30 22:31:28 +02:00
Marius Bakke 941a38b66e
gnu: exempi: Update to 2.4.2. 
* gnu/packages/freedesktop.scm (exempi): Update to 2.4.2.
 2017-03-30 22:31:28 +02:00
Leo Famulari 16ab9824b2
gnu: mbedtls-apache: Update to 2.4.2 [fixes CVE-2017-2784, SLOTH and others]. 
See 'ChangeLog' in the source code distribution for more information about
security-related bug fixes.

* gnu/packages/tls.scm (mbedtls-apache): Update to 2.4.2.
 2017-03-30 14:35:41 -04:00
Ricardo Wurmus 67656b7a86
gnu: propeller-binutils: Use flex 2.6.1. 
* gnu/packages/embedded.scm (propeller-binutils)[native-inputs]: Replace
"flex" with "flex-2.6.1".
 2017-03-30 17:34:34 +02:00
Kei Kebreau e3b2e943b8
gnu: milkytracker: Update to 1.0.0. 
* gnu/packages/music.scm (milkytracker): Update to 1.0.0.
[source]: Change uri; add file-name; add snippet to remove non-FSDG
compliant data.
[build-system]: Change from gnu-build-system to cmake-build-system.
[arguments]: Remove #:make-flags; disable tests (which are no longer
present).
[inputs]: Change sdl to sdl2.
 2017-03-30 10:18:22 -04:00
Ludovic Courtès 314120f2be
gnu: guix: Update development snapshot. 
The previous snapshot lacked the FTP download fix from commit
6dfd683dc7.  Thus, the daemon's "download"
built-in would fail to download over FTP.

* gnu/packages/package-management.scm (guix-devel): Update to aabece2.
 2017-03-30 11:50:45 +02:00
Ludovic Courtès aabece2ef8
gnu: guile-git, guile-bytestructures: Switch to Guile 2.2. 
* gnu/packages/guile.scm (guile-bytestructures)[inputs]: Replace
GUILE-2.0 with GUILE-2.2.
(guile-git)[inputs]: Likewise.
 2017-03-30 11:15:17 +02:00
Ludovic Courtès e93f8d9849
gnu: guile-git: Update to latest Git snapshot. 
* gnu/packages/guile.scm (guile-git): Update to 96dfb3b.
[arguments]: Remove #:parallel-tests?.
 2017-03-30 11:15:17 +02:00
Andy Patterson 58b240783c
gnu: ccl: Forcibly set CCL_DEFAULT_DIRECTORY. 
* gnu/packages/lisp.scm (ccl)[arguments]: Unconditionally set the
CCL_DEFAULT_DIRECTORY environment variable in the wrapper script.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-03-30 11:15:17 +02:00
Andy Patterson fc7d5a34d0
gnu: ccl: Install included libraries. 
* gnu/packages/lisp.scm (ccl)[arguments]: Add 'srfi-26' to '#:modules', and
copy the included libraries to the output in the 'install' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-03-30 11:15:17 +02:00
Arun Isaac c86c19914a
gnu: Add emacs-linum-relative. 
* gnu/packages/emacs.scm (emacs-linum-relative): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-03-30 11:15:17 +02:00
Vasile Dumitrascu 239cf024b4
gnu: Add emacs-highlight-sexp. 
* gnu/packages/emacs (emacs-highlight-sexp): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-03-30 11:15:16 +02:00
Vasile Dumitrascu 6a91c5f2dc
gnu: Add emacs-ox-twbs. 
* gnu/packages/emacs.scm (emacs-ox-twbs): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-03-30 11:15:16 +02:00
Vasile Dumitrascu 6b7e336265
gnu: Add emacs-idle-highlight. 
* gnu/packages/emacs.scm (emacs-idle-highlight): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-03-30 11:15:16 +02:00
Ricardo Wurmus fa702e1a29
gnu: discrover: Add missing includes. 
* gnu/packages/bioinformatics.scm (discrover)[arguments]: Add build phase
"add-missing-includes" to include "random" headers.
 2017-03-30 10:35:54 +02:00
Ricardo Wurmus 0d2c0562b8
gnu: stringtie: Remove typedef conflict. 
* gnu/packages/bioinformatics.scm (stringtie)[arguments]: Remove conflicting
typedef in a new build phase "remove-duplicate-typedef".
 2017-03-30 10:35:53 +02:00
Ricardo Wurmus c3913fac57
gnu: powertabeditor: Link with pthread. 
* gnu/packages/music.scm (powertabeditor)[arguments]: Link with "-lpthread" to
fix build with GCC 5.
 2017-03-30 10:35:53 +02:00
Ricardo Wurmus e32f8dad94
gnu: hugs: Build with GCC 4.9. 
* gnu/packages/hugs.scm (hugs)[native-inputs]: Add "gcc-4.9".
 2017-03-30 10:35:52 +02:00
Leo Famulari 06e8d0c8e5
gnu: dash: Update to 0.5.9.1. 
* gnu/packages/shells.scm (dash): Update to 0.5.9.1.
[source]: Use git-fetch.
[native-inputs]: Add autoconf and automake.
[arguments]: Add 'bootstrap' phase.
 2017-03-30 03:37:31 -04:00
Eric Bavier 77310a1c2d
gnu: qutebrowser: Upgrade to 0.10.1. 
* gnu/packages/web.scm (qutebrowser): Upgrade to 0.10.1.
 2017-03-29 21:04:48 -05:00
Eric Bavier bf5b6fb294
gnu: thefuck: Upgrade to 3.15 and enable tests. 
* gnu/packages/patches/thefuck-test-environ.patch: New patch.
* gnu/packages/admin.scm (thefuck): Upgrade to 3.15.
[source]: Use patch.
[arguments]: Remove '#:tests? #f'.  Move 'check' phase after 'install'.
* gnu/local.mk (dist_patch_DATA): Add patch.
 2017-03-29 20:51:06 -05:00
Tobias Geerinckx-Rice 6fd52309b8
gnu: Use HTTPS for almost all gnu.org HOME-PAGEs. 
All HTTP gnu.org (and supported subdomain) HOME-PAGEs changed to HTTPS.
 2017-03-30 01:30:16 +02:00
Tobias Geerinckx-Rice c219997a14
gnu: orc: Update home page. 
* gnu/packages/gstreamer.scm (orc)[home-page]: Update.
 2017-03-30 01:29:33 +02:00
Mark H Weaver 2abf6371cc
gnu: icecat: Add fixes from mozilla-esr45; use skia by default. 
* gnu/packages/gnuzilla.scm (icecat)[source][patches]: Add fixes from
the upstream mozilla-esr45 repository.
[arguments]: Add 'use-skia-by-default' phase.
 2017-03-29 19:03:38 -04:00
Ludovic Courtès 755c5ba85c
gnu: wordnet: Build with the default GCC. 
* gnu/packages/wordnet.scm (wordnet)[native-inputs]: Remove.
 2017-03-29 22:52:02 +02:00
Leo Famulari 5e92341471
gnu: python-enum34: Update to 1.1.6. 
* gnu/packages/python.scm (python-enum34, python2-enum34): Update to 1.1.6.
[arguments]: Remove custom test phase.
 2017-03-29 16:39:04 -04:00
Ludovic Courtès 2fa077f316
gnu: guile-reader: Build with gperf 3.0. 
* gnu/packages/guile.scm (guile-reader)[native-inputs]: Use GPERF-3.0
instead of GPERF.
 2017-03-29 22:29:49 +02:00
Kei Kebreau 9342c5a0bc
gnu: schismtracker: Update to 20160913. 
* gnu/packages/music.scm (schismtracker): Update to 20160913.
[source]: Update snippet for version 20160913.
 2017-03-29 16:23:59 -04:00
Tobias Geerinckx-Rice a29d329fa8
gnu: games: Don't MKDIR before INSTALL-FILE. 
* gnu/packages/games.scm (glkterm, glulxe, grue-hunter)[arguments]:
Remove spurious MKDIRs.
 2017-03-29 22:06:01 +02:00
Tobias Geerinckx-Rice 05e0ac46ef
gnu: retroarch: Don't use %OUTPUT. 
* gnu/packages/games.scm (retroarch)[arguments]: Accept an OUTPUTS key
in the configure phase.  Add a comment about the script.  Use LET*.
 2017-03-29 22:06:01 +02:00
Tobias Geerinckx-Rice 3f12714742
gnu: games: Use ‘modify-phases’. 
* gnu/packages/games.scm (pingus, cmatrix, freedink-data, xboing, irrlicht,
glkterm, glulx, retroarch)[arguments]: Use ‘modify-phases’ syntax.
 2017-03-29 22:06:00 +02:00
Tobias Geerinckx-Rice 92bdf77790
gnu: glulxe: Fix typo. 
* gnu/packages/games.scm (glulxe)[description]: Fix typo.
 2017-03-29 22:06:00 +02:00
Tobias Geerinckx-Rice dbe7095b46
gnu: glkterm: Use @code in description. 
* gnu/packages/games.scm (glkterm)[description]: Use @code.
 2017-03-29 22:06:00 +02:00
Tobias Geerinckx-Rice ddce090306
gnu: games: Use INSTALL-FILE. 
* gnu/packages/games.scm (glkterm, glulxe): Use INSTALL-FILE, return #t
instead of an undefined value, and prefer using let bindings.
 2017-03-29 22:05:59 +02:00
Tobias Geerinckx-Rice dbaca6b507
gnu: zstd: Update to 1.1.4. 
* gnu/packages/compression.scm (zstd): Update to 1.1.4.
 2017-03-29 22:05:59 +02:00
Tobias Geerinckx-Rice a53a6b6fef
gnu: hyperrogue: Improve description. 
* gnu/packages/games.scm (hyperrogue)[description]: Mainly fix a typo.
Throw in a few tweaks as well.
 2017-03-29 22:05:59 +02:00
Tobias Geerinckx-Rice 8d5fe1f1cf
gnu: Add httpfs2. 
* gnu/packages/file-systems.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2017-03-29 22:05:59 +02:00
Leo Famulari 8615da9051
gnu: beets: Don't build with python-enum34. 
This package is unnecessary when using Python > 3.3.

* gnu/packages/music.scm (beets)[inputs]: Remove python-enum34.
 2017-03-29 14:57:24 -04:00
Leo Famulari 7086540de6
gnu: elfutils: Update to 0.168 [fixes CVE-2016-{10254,10255}]. 
* gnu/packages/elf.scm (elfutils): Update to 0.168.
[source]: Update URL.
[home-page]: Update URL.
 2017-03-29 14:37:49 -04:00
Leo Famulari 4caad35dbe
gnu: imagemagick: Update to 6.9.8-3. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.8-3.
 2017-03-29 14:37:45 -04:00
Marius Bakke c7f7a5bac2
gnu: kakoune: Fix build after Boost ABI change. 
Also remove now-obsolete snippet and inputs.

* gnu/packages/text-editors.scm (kakoune)[source]: Remove gzip substitution.
[arguments]: Drop CPPFLAGS from #:make-flags.
[native-inputs]: Remove GCC-5.
[inputs]: Remove gcc:lib.
 2017-03-29 14:23:56 +02:00
Ludovic Courtès a4cdcffb19
gnu: lxsession: Build Vala code from source. 
* gnu/packages/lxde.scm (lxsession)[source](snippet): New field.
 2017-03-29 13:18:37 +02:00
Kei Kebreau f8279ba46b
gnu: hyperrogue: Update to 9.4c. 
* gnu/packages/games.scm (hyperrogue): Update to 9.4c.
[source]: Remove snippet.
[arguments]: Remove #:make-flags; adjust configure and install phases; add
install-data phase.
[native-inputs]: Add hyperrogue-data and unzip.
[license]: Add cc-by-sa4.0 and cc0 licenses for sounds.
 2017-03-28 23:38:23 -04:00
Leo Famulari 7bde7273c3
gnu: libressl: Update to 2.5.2. 
* gnu/packages/tls.scm (libressl): Update to 2.5.2.
 2017-03-28 22:05:55 -04:00
Vasile Dumitrascu b125649a59
gnu: emacs-monroe: Don't use MELPA archive. 
* gnu/packages/emacs.scm (emacs-monroe)[version]: Change to 0.3.1.
[source]: Use github instead of melpa. Add (file-name).
[home-page]: Use HTTPS.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-03-29 03:05:40 +02:00
Marius Bakke 3ee9355e2f
gnu: python-pexpect: Add verbose test output. 
Fixes <https://bugs.gnu.org/26286>.

* gnu/packages/python.scm (python-pexpect, python2-pexpect)[arguments]: Add
"-v" to "nosetests" command.
 2017-03-29 02:31:59 +02:00
ng0 812c1819a0
gnu: Add lxde. 
* gnu/packages/lxde.scm (lxde): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-03-28 22:15:45 +02:00