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460 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice e405c0bcd9
gnu: armadillo: Update to 9.100.4. 
* gnu/packages/maths.scm (armadillo): Update to 9.100.4.
 2018-08-16 02:40:59 +02:00
Kei Kebreau df1bc82b69
gnu: ocaml-gsl: Update to 1.22.0. 
* gnu/packages/maths.scm (ocaml-gsl): Update to 1.22.0.
 2018-08-15 08:11:58 -04:00
Kei Kebreau 9285f8bbae
gnu: coda: Update to 2.19. 
* gnu/packages/maths.scm (coda): Update to 2.19.
 2018-08-13 22:18:09 -04:00
Efraim Flashner 077d66ed42
gnu: mcrl2: Build with modular qt. 
* gnu/packages/maths.scm (mcrl2)[inputs]: Replace qt with qtbase.
 2018-07-29 20:00:30 +03:00
Marius Bakke 48d7ac175f
gnu: openlibm: Update to 0.6.0. 
* gnu/packages/maths.scm (openlibm): Update to 0.6.0.
 2018-07-28 18:12:13 +02:00
Marius Bakke 46bda5eb7a
gnu: glm: Update home page. 
* gnu/packages/maths.scm (glm)[home-page]: Use HTTPS.
 2018-07-28 17:56:59 +02:00
Marius Bakke 5ea4b5943d
gnu: glm: Update to 0.9.9.0. 
* gnu/packages/maths.scm (glm): Update to 0.9.9.0.
[source](uri): Change to new download location.
 2018-07-28 17:55:04 +02:00
Kei Kebreau c215fa2135
gnu: octave: Add qhull support. 
* gnu/packages/maths.scm (octave)[inputs]: Add qhull.
 2018-07-17 15:29:05 -04:00
Kei Kebreau d65f0661f3
gnu: Add qhull. 
* gnu/packages/maths.scm (qhull): New variable.
 2018-07-17 12:49:20 -04:00
Marius Bakke 873325b030
Merge branch 'master' into staging 2018-07-08 23:58:22 +02:00
Kei Kebreau 6104f922ee
gnu: units: Update to 2.17. 
* gnu/packages/maths.scm (units): Update to 2.17.
 2018-07-02 21:12:55 -04:00
Marius Bakke 92af3ce417
Merge branch 'master' into staging 2018-07-02 12:18:58 +02:00
Kei Kebreau 7a3772b374
gnu: qtoctave: Fix build for Qt 5.11. 
* gnu/packages/maths.scm (qtoctave)[source]: Add patch.
[native-inputs]: Add texlive.
* gnu/packages/patches/qtoctave-qt-5.11-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2018-06-30 20:05:58 -04:00
Tobias Geerinckx-Rice 0f6dc120ca
gnu: slepc: Return #t from all phases. 
* gnu/packages/maths.scm (slepc)[arguments]: Return #t rather than
undefined from phases.
 2018-06-30 03:46:20 +02:00
Tobias Geerinckx-Rice b414cf523b
gnu: mumps: Use INVOKE. 
* gnu/packages/maths.scm (mumps)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-06-30 03:46:20 +02:00
Tobias Geerinckx-Rice e02a9975b8
gnu: superlu-dist: Return #t from all phases. 
* gnu/packages/maths.scm (superlu-dist)[arguments]: Return #t rather
than undefined from phases. Substitute INVOKE for SYSTEM*.
 2018-06-30 03:46:20 +02:00
Tobias Geerinckx-Rice d67a7e9e8d
gnu: scotch: Return #t from all phases. 
* gnu/packages/maths.scm (scotch)[arguments]: Return #t rather than undefined from phases. Substitute INVOKE for SYSTEM*.
 2018-06-30 03:46:19 +02:00
Tobias Geerinckx-Rice 49fdd357a2
gnu: petsc: Return #t from phases. 
* gnu/packages/maths.scm (petsc)[arguments]: Substitute INVOKE for
SYSTEM*.
 2018-06-30 03:46:19 +02:00
Marius Bakke b7a46ed227
gnu: openblas: Fix build on i686. 
* gnu/packages/patches/openblas-fix-tests-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/maths.scm (openblas)[native-inputs]: Add it.
[arguments]: Add phase to apply it on i686 systems only.
 2018-06-20 16:02:04 +02:00
Marius Bakke 6969c4de44
Merge branch 'master' into staging 2018-06-18 15:29:38 +02:00
Marius Bakke 73d18915b5
gnu: OpenBLAS: Update to 0.3.0. 
* gnu/packages/maths.scm (openblas): Update to 0.3.0.
 2018-06-18 15:27:08 +02:00
Ludovic Courtès f3a34b9de8
gnu: gsl: Update to 2.5. 
* gnu/packages/maths.scm (gsl): Update to 2.5.
 2018-06-17 01:40:14 +02:00
Ludovic Courtès b5edc47912
gnu: flann: Fix builds with CMake >= 3.11. 
* gnu/packages/patches/flann-cmake-3.11.patch: New file.
* gnu/packages/maths.scm (flann)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2018-06-12 15:23:34 +02:00
Theodoros Foradis fc3c88ec9c
gnu: lapack-3.5: Delete package. 
* gnu/packages/maths.scm (lapack-3.5): Delete package.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2018-06-07 23:23:40 +02:00
Mark H Weaver c0d7c1244a
Merge branch 'master' into core-updates 2018-05-29 21:20:47 -04:00
Kei Kebreau de658cc2f8
gnu: octave: Update to 4.4.0. 
* gnu/packages/maths.scm (octave): Update to 4.4.0.
 2018-05-29 18:20:37 -04:00
Mark H Weaver 1640f16e78
Merge branch 'master' into core-updates 2018-05-27 01:26:09 -04:00
Ludovic Courtès 6df2a50ac4
gnu: openmpi: Update to 3.0.1. 
* gnu/packages/mpi.scm (openmpi): Update to 3.0.1.
[arguments]: In 'remove-absolute' phase, adjust romio file name.
* gnu/packages/maths.scm (scalapack)[arguments]: Add
'set-test-environment' phase.
(slepc-openmpi)[arguments]: Likewise.
(mumps-openmpi)[arguments]: Likewise.
(superlu-dist)[arguments]: In 'check' phase, set
'OMPI_MCA_plm_rsh_agent'.
(scotch)[arguments]: In 'build-esmumps', likewise.
(p4est)[arguments]: Add 'set-test-environment' phase.
(hypre-openmpi)[arguments]: Likewise.
 2018-05-25 13:43:03 +02:00
Ludovic Courtès 0921eff2a8
gnu: superlu-dist: Update to 5.3.0. 
* gnu/packages/maths.scm (superlu-dist): Update to 5.3.0.
[source](snippet): Adapt file name and function names to new version.
Remove 'delete-file' call.
 2018-05-25 13:43:03 +02:00
Mark H Weaver 539bf8f2c0
Merge branch 'master' into core-updates 2018-05-17 01:00:50 -04:00
Tobias Geerinckx-Rice 9a2ac95d76
gnu: r-desolve: Update to 1.21. 
* gnu/packages/maths.scm (r-desolve): Update to 1.21.
 2018-05-17 01:01:59 +02:00
Ludovic Courtès e18e7cb9f4
gnu: hypre: Add missing dependency on Perl. 
Previously the test suite would fail to run 'ppmquant', though it would
silently ignore it.

* gnu/packages/maths.scm (hypre)[native-inputs]: Add PERL.
 2018-05-13 13:29:26 +02:00
Ludovic Courtès 4f38754180
gnu: arpack-ng-openmpi: Fix build. 
* gnu/packages/maths.scm (arpack-ng-openmpi)[arguments]: Inherit
arguments from ARPACK-NG.  Previously the 'configure' phase would fail
due to the lack of a 'configure' script.
 2018-05-11 18:42:42 +02:00
Marius Bakke 12bd588346
Merge branch 'master' into core-updates 2018-05-06 15:56:24 +02:00
Marius Bakke 560acf2594
gnu: Add python-kiwisolver. 
* gnu/packages/maths.scm (python-kiwisolver, python2-kiwisolver): New public
variables.
 2018-05-05 13:16:32 +02:00
Adam Massmann 07254d8b22
gnu: gnuplot: Update to 5.2.2 
* gnu/packages/maths.scm (gnuplot): Update to 5.2.2.
[arguments]: New field.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-05-04 15:27:29 +02:00
Mark H Weaver 3d5ad159b3
Merge branch 'master' into core-updates 2018-04-30 04:03:54 -04:00
Eric Bavier e7323f4c08
gnu: mumps: Update to 5.1.2. 
* gnu/packages/maths.scm (mumps): Update to 5.1.2.
 2018-04-26 20:54:18 -05:00
Eric Bavier d98e9009a9
gnu: scotch: Update to 6.0.5a. 
* gnu/packages/patches/pt-scotch-build-parallelism.patch: Delete files.
* gnu/packages/patches/scotch-build-parallelism.patch,
gnu/packages/patches/scotch-graph-diam-64.patch,
gnu/packages/patches/scotch-graph-induce-type-64.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/maths.scm (scotch): Update to 6.0.5a.
[source](patches): Adjust accordingly.
 2018-04-26 20:54:18 -05:00
Ricardo Wurmus 2bcf5fd337
gnu: r-subplex: Update to 1.5-4. 
* gnu/packages/maths.scm (r-subplex): Update to 1.5-4.
 2018-04-21 23:07:52 +02:00
Mark H Weaver f89aa1521a
Merge branch 'master' into core-updates 2018-04-10 00:42:22 -04:00
Marius Bakke 33d82486d5
gnu: vc: Do not optimize for the build machine CPU. 
* gnu/packages/maths.scm (vc)[arguments]: Add "-DTARGET_ARCHITECTURE=none" to
  #:configure-flags.
 2018-04-08 22:32:24 +02:00
Kei Kebreau 36ce25f092
gnu: Add qtoctave. 
* gnu/packages/maths.scm (qtoctave): New variable.
 2018-03-31 14:05:25 -04:00
Kei Kebreau ab5f3f2131
gnu: octave: Add audio and more sparse matrix support. 
* gnu/packages/maths.scm (octave)[inputs]: Add suitesparse, libsndfile,
portaudio and alsa-lib.
 2018-03-31 14:05:16 -04:00
Marius Bakke 5576cfabf3
Merge branch 'master' into core-updates 2018-03-29 17:34:41 +02:00
Nadya Voronova 910deec66c
gnu: Add tcalc. 
* gnu/packages/maths.scm (tcalc): New variables.

Signed-off-by: Ludovic Courtès <ludovic.courtes@inria.fr>
 2018-03-28 17:13:00 +02:00
Tobias Geerinckx-Rice 1dc3109707
gnu: scotch: Use predictable source URI. 
* gnu/packages/maths.scm (scotch)[source]: Use predictable URI.
 2018-03-25 20:01:02 +02:00
Tobias Geerinckx-Rice 7112b2f148
gnu: openlibm: Update to 0.5.5. 
* gnu/packages/maths.scm (openlibm): Update to 0.5.5.
 2018-03-25 20:01:00 +02:00
Tobias Geerinckx-Rice e0bee0de70
gnu: ceres-solver: Update to 1.14.0. 
* gnu/packages/maths.scm (ceres-solver): Update to 1.14.0.
 2018-03-25 00:36:32 +01:00
Mark H Weaver ac21be848a
Merge branch 'master' into core-updates 2018-03-20 14:22:06 -04:00