54c3b7bf66
gnu: perl-strictures@2: Update to 2.000004.
...
* gnu/packages/perl.scm (perl-strictures-2): Update to 2.000004.
2018-04-27 05:36:52 +02:00
adfc742c42
gnu: ranger: Fix description and tests.
...
* gnu/packages/disk.scm (ranger)[arguments]: Replace '#:phases' with
'#:test-target'.
[description]: Remove texinfo markup. 'VI' -> 'Vi'.
2018-04-26 21:08:23 -05:00
834b0b9a5c
gnu: Add Ranger.
...
* gnu/packages/disk.scm (ranger): New variable.
2018-04-26 20:54:18 -05:00
e7323f4c08
gnu: mumps: Update to 5.1.2.
...
* gnu/packages/maths.scm (mumps): Update to 5.1.2.
2018-04-26 20:54:18 -05:00
d98e9009a9
gnu: scotch: Update to 6.0.5a.
...
* gnu/packages/patches/pt-scotch-build-parallelism.patch: Delete files.
* gnu/packages/patches/scotch-build-parallelism.patch,
gnu/packages/patches/scotch-graph-diam-64.patch,
gnu/packages/patches/scotch-graph-induce-type-64.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/maths.scm (scotch): Update to 6.0.5a.
[source](patches): Adjust accordingly.
2018-04-26 20:54:18 -05:00
c2e76b7082
gnu: darktable: Update to 2.4.3.
...
* gnu/packages/photo.scm (darktable): Update to 2.4.3.
2018-04-27 03:11:50 +02:00
5b292eac73
gnu: quassel: Use HTTPS home page.
...
* gnu/packages/irc.scm (quassel)[home-page]: Use HTTPS.
2018-04-27 02:56:45 +02:00
72dae07296
gnu: quassel: Update to 0.12.5.
...
* gnu/packages/irc.scm (quassel): Update to 0.12.5.
[source]: Remove patch.
* gnu/packages/patches/quassel-fix-tls-check.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-04-27 02:56:44 +02:00
1c51b7b4bc
gnu: libetonyek: Update to 0.1.8.
...
gnu/packages/libreoffice.scm (libetonyek): Update to 0.1.8.
2018-04-27 02:56:44 +02:00
fb9232d717
gnu: cpuid: Update to 20180419.
...
* gnu/packages/linux.scm (cpuid): Update to 20180419.
2018-04-27 02:56:44 +02:00
ca2158bb3a
gnu: pcmanfm: Update to 1.3.0.
...
* gnu/packages/lxde.scm (pcmanfm): Update to 1.3.0.
[source]: Remove patch.
* gnu/packages/patches/pcmanfm-CVE-2017-8934.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-04-27 02:56:43 +02:00
d5db813b38
gnu: libfm: Update to 1.3.0.
...
* gnu/packages/lxde.scm (libfm): Update to 1.3.0.
2018-04-27 02:56:43 +02:00
6a4c7d311a
gnu: perl-log-any-adapter-log4perl: Update to 0.09.
...
* gnu/packages/perl.scm (perl-log-any-adapter-log4perl): Update to 0.09.
[source]: Update maintainer URI.
2018-04-27 02:56:43 +02:00
e1612fb59c
gnu: perl-safe-isa: Update to 1.000010.
...
* gnu/packages/perl.scm (perl-safe-isa): Update to 1.000010.
2018-04-27 02:56:42 +02:00
c3a17ab7af
gnu: perl-sub-quote: Update to 2.005001.
...
* gnu/packages/perl.scm (perl-sub-quote): Update to 2.005001.
2018-04-27 02:56:42 +02:00
9b8e38ae3d
gnu: perl-capture-tiny: Update to 0.48.
...
* gnu/packages/perl.scm (perl-capture-tiny): Update to 0.48.
2018-04-27 02:56:42 +02:00
085a95a71c
gnu: perl-b-hooks-endofscope: Update to 0.24.
...
* gnu/packages/perl.scm (perl-b-hooks-endofscope): Update to 0.24.
2018-04-27 02:56:41 +02:00
9960ed6291
gnu: perl-file-sharedir-install: Update to 0.13.
...
* gnu/packages/perl.scm (perl-file-sharedir-install): Update to 0.13.
2018-04-27 02:56:41 +02:00
a7999e2d63
gnu: perl-test-notabs: Update to 2.02.
...
* gnu/packages/perl-check.scm (perl-test-notabs): Update to 2.02.
2018-04-27 02:56:41 +02:00
93a554a0d9
gnu: python-simplejson: Update to 3.14.0.
...
* gnu/packages/python.scm (python-simplejson): Update to 3.14.0.
2018-04-27 02:56:40 +02:00
e3e74e4022
gnu: python2-ndg-httpsclient: Fix build.
...
This might be a follow-up to a39cc01632
2018-04-27 02:56:17 +02:00
ae9877fed3
gnu: paperkey: Update to 1.5.
...
* gnu/packages/gnupg.scm (paperkey): Update to 1.5.
2018-04-26 19:11:27 -05:00
b43a9eb361
gnu: bedops: Update to 2.4.33.
...
* gnu/packages/bioinformatics.scm (bedops): Update to 2.4.33.
2018-04-27 01:11:57 +02:00
c829c5ea85
gnu: samtools: Update to 1.8.
...
* gnu/packages/bioinformatics.scm (samtools): Update to 1.8.
2018-04-27 01:11:47 +02:00
cbd9f91c32
gnu: bcftools: Update to 1.8.
...
* gnu/packages/bioinformatics.scm (bcftools): Update to 1.8.
* gnu/local.mk: Remove patch.
* gnu/packages/patches/bcftools-regidx-unsigned-char.patch: Remove file.
2018-04-27 01:11:42 +02:00
8df0267ad4
gnu: htslib: Update to 1.8.
...
* gnu/packages/bioinformatics.scm (htslib): Update to 1.8.
2018-04-27 01:11:24 +02:00
16ef3368da
gnu: PackageKit: Update to 1.1.10 [fixes CVE-2018-1106].
...
* gnu/packages/freedesktop.scm (packagekit): Update to 1.1.10.
2018-04-26 16:10:54 -04:00
1f22a544c2
gnu: emacs-magit-popup: Update to 2.12.3.
...
* gnu/packages/emacs.scm (emacs-magit-popup): Update to 2.12.3.
2018-04-26 23:03:51 +03:00
cec021d16a
gnu: emacs-with-editor: Update to 2.7.2.
...
* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.7.2.
2018-04-26 23:03:51 +03:00
e9c3a780d1
gnu: geiser: Update to 0.10.
...
* gnu/packages/emacs.scm (geiser): Update to 0.10.
2018-04-26 23:03:51 +03:00
205044b9c1
gnu: python-josepy: Update to 1.1.0.
...
* gnu/packages/python-crypto.scm (python-josepy, python2-josepy): Update
to 1.1.0.
2018-04-26 15:41:40 -04:00
d1f1a7a0b1
gnu: python-qrcode: Update to 6.0.
...
* gnu/packages/python.scm (python-qrcode): Update to 6.0.
2018-04-26 21:09:00 +02:00
c10176649f
gnu: python2-pathlib2: Update to 2.3.2.
...
* gnu/packages/python.scm (python2-pathlib2): Update to 2.3.2.
2018-04-26 21:09:00 +02:00
5cf24cde18
gnu: python-rst.linker: Update to 1.9.
...
* gnu/packages/python.scm (python-rst.linker): Update to 1.9.
2018-04-26 21:09:00 +02:00
9052324d72
gnu: python-sphinx@1.6: Update to 1.6.4.
...
* gnu/packages/python.scm (python-sphinx-1.6): Update to 1.6.4.
2018-04-26 21:09:00 +02:00
ebf09e77dc
gnu: python-ndg-httpsclient: Update to 0.5.0.
...
* gnu/packages/python-web.scm (python-ndg-httpsclient): Update to 0.5.0.
2018-04-26 21:08:59 +02:00
9616e86aa0
gnu: r-ztable: Update to 0.1.8.
...
* gnu/packages/statistics.scm (r-ztable): Update to 0.1.8.
2018-04-26 21:08:59 +02:00
9b4d3c1d02
gnu: r-sn: Update to 1.5-2.
...
* gnu/packages/statistics.scm (r-sn): Update to 1.5-2.
2018-04-26 21:08:59 +02:00
442ce03acc
gnu: r-sourcetools: Update to 0.1.7.
...
* gnu/packages/statistics.scm (r-sourcetools): Update to 0.1.7.
2018-04-26 21:08:59 +02:00
5e517e9b98
gnu: python-html5-parser: Update to 0.4.5.
...
* gnu/packages/python-web.scm (python-html5-parser): Update to 0.4.5.
2018-04-26 21:08:58 +02:00
a4d8b386ac
gnu: mg: Update to 20180408.
...
* gnu/packages/text-editors.scm (mg): Update to 20180408.
[source]: Switch from discontinued proper releases to a git tag.
2018-04-26 21:08:58 +02:00
11edb2474c
gnu: mg: Find ncurses through pkg-config.
...
* gnu/packages/text-editors.scm (mg)[arguments]: Remove explicit
‘CURSES_LIBS=-lncurses’ setting from #:make-flags.
2018-04-26 21:08:58 +02:00
1cc3e26b6a
gnu: fio: Use INVOKE.
...
* gnu/packages/benchmark.scm (fio)[arguments]: Substitute INVOKE for
SYSTEM* and end phase with explicit #t.
2018-04-26 21:08:58 +02:00
d2caedf08d
gnu: ghostwriter: Update to 1.6.2.
...
* gnu/packages/text-editors.scm (ghostwriter): Update to 1.6.2.
2018-04-26 21:08:58 +02:00
3b8064734e
gnu: youtube-viewer: Update to 3.3.4.
...
* gnu/packages/video.scm (youtube-viewer): Update to 3.3.4.
2018-04-26 21:08:57 +02:00
a3cbd75bb3
gnu: openvpn: Update to 2.4.6.
...
* gnu/packages/vpn.scm (openvpn): Update to 2.4.6.
2018-04-26 21:08:57 +02:00
b6617a1ed8
gnu: perl-text-glob: Update to 0.11.
...
* gnu/packages/perl.scm (perl-text-glob): Update to 0.11.
2018-04-26 21:08:57 +02:00
4e7ec8c06e
gnu: perl-task-weaken: Update to 1.06.
...
* gnu/packages/perl.scm (perl-task-weaken): Update to 1.06.
2018-04-26 21:08:57 +02:00
4f1f1592a6
gnu: perl-module-find: Update to 0.13.
...
* gnu/packages/perl.scm (perl-module-find): Update to 0.13.
2018-04-26 21:08:56 +02:00
dbfbe2b0c8
gnu: perl-mime-types: Update to 2.17.
...
* gnu/packages/perl.scm (perl-mime-types): Update to 2.17.
2018-04-26 21:08:56 +02:00
4844ccb2fe
gnu: perl-file-sharedir-install: Update to 0.12.
...
* gnu/packages/perl.scm (perl-file-sharedir-install): Update to 0.12.
2018-04-26 21:08:56 +02:00
39a915c2bf
gnu: perl-devel-overloadinfo: Update to 0.005.
...
* gnu/packages/perl.scm (perl-devel-overloadinfo): Update to 0.005.
2018-04-26 21:08:56 +02:00
ff8b52bad9
gnu: perl-class-inspector: Update to 1.32.
...
* gnu/packages/perl.scm (perl-class-inspector): Update to 1.32.
2018-04-26 21:08:55 +02:00
ea1db49a89
gnu: perl-file-find-rule: Update to 0.34.
...
* gnu/packages/perl.scm (perl-file-find-rule): Update to 0.34.
2018-04-26 21:08:55 +02:00
8c8771c375
gnu: perl-error: Update to 0.17025.
...
* gnu/packages/perl-.scm (perl-error): Update to 0.17025.
2018-04-26 21:08:55 +02:00
41b937cd5f
gnu: perl-test-simple: Update to 1.302136.
...
* gnu/packages/perl-check.scm (perl-test-simple): Update to 1.302136.
2018-04-26 21:08:55 +02:00
8cb722028c
gnu: perl-test-output: Update to 1.031.
...
* gnu/packages/perl-check.scm (perl-test-output): Update to 1.031.
2018-04-26 21:08:54 +02:00
23da2107f9
gnu: perl-test-differences: Update to 0.64.
...
* gnu/packages/perl-check.scm (perl-test-differences): Update to 0.64.
2018-04-26 21:08:54 +02:00
cb6fb537dd
gnu: perl-test-pod: Update to 1.52.
...
* gnu/packages/perl-check.scm (perl-test-pod): Update to 1.52.
2018-04-26 21:08:54 +02:00
79a9dee62d
gnu: perl-test-base: Update to 0.89.
...
* gnu/packages/perl-check.scm (perl-test-base): Update to 0.89.
2018-04-26 21:08:54 +02:00
379848ed31
gnu: zsh: Update to 5.5.1.
...
* gnu/packages/shells.scm (zsh): Update to 5.5.1.
[source]: Remove obsolete patches.
* gnu/packages/patches/zsh-CVE-2018-7548.patch,
gnu/packages/patches/zsh-CVE-2018-7549.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-04-26 15:06:03 -04:00
2690b6ce7d
gnu: Add libpfm4.
...
* gnu/packages/linux.scm (libpfm4): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-26 16:10:30 +02:00
25637b770e
gnu: Add psm2.
...
* gnu/packages/linux.scm (psm2): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-26 16:10:30 +02:00
28cae33891
gnu: perl@5.26.2: Don't export variable.
...
This prevents it from ending up in user profiles, which would fail due to
wrong search paths as reported in <https://bugs.gnu.org/31216#43 >.
* gnu/packages/perl.scm (perl-5.26.2): Use DEFINE instead of DEFINE-PUBLIC.
2018-04-26 12:52:45 +02:00
90a8ef8c43
gnu: qemu: Enable GTK3 frontend.
...
* gnu/packages/virtualization.scm (qemu)[native-inputs]: Add "gettext" to native-inputs.
[inputs]: Add "gtk+" to inputs.
* gnu/packages/virtualization.scm (qemu-minimal)[native-inputs]: Remove "gettext"
from inherited inputs.
[inputs]: Remove "gtk+" from inherited inputs.
2018-04-26 12:45:57 +02:00
27b52c1f6a
gnu: qemu: Build with Python 3 and SDL2 support.
...
* gnu/packages/bootloaders.scm (qemu-minimal-2.10): Remove variable.
* gnu/packages/virtualization.scm (qemu)[inputs]: Use sdl2 instead of sdl.
[native-inputs]: Use python-wrapper instead of python@2.
* gnu/packages/virtualization.scm (qemu-minimal)[inputs]: Remove sdl2 instead of
sdl from inherited packages.
* gnu/packages/virtualization.scm (qemu-minimal-2.10): Add variable.
[native-inputs]: Remove python-wrapper from inherited packages and use python@2
instead.
* gnu/packages/debug.scm (american-fuzzy-lop): Inherit from moved hidden-package
qemu-minimal-2.10.
2018-04-26 12:45:57 +02:00
87bcd9bf65
gnu: evince: Update to 3.28.2.
...
* gnu/packages/gnome.scm (evince): Update to 3.28.2.
2018-04-26 11:04:11 +02:00
5fa88cc466
gnu: gnome-disk-utility: Update to 3.28.1.
...
* gnu/packages/gnome.scm (gnome-disk-utility): Update to 3.28.1.
2018-04-26 09:58:30 +02:00
c7fc414e1e
gnu: gnome-tweak-tool: Update to 3.26.4.
...
* gnu/packages/gnome.scm (gnome-tweak-tool): Update to 3.26.4.
[arguments]: Replace 'configure, 'build, 'check and 'install phases with Meson
build phases.
[native-inputs]: Add "gtk+:bin", "meson" and "ninja".
[inputs]: Add "nautilus." Replace "python@2" with "python" and
"python2-pygobject" with "python-pygobject".
2018-04-26 09:51:26 +02:00
dcf3ab6ab3
gnu: enlightenment: Update to 0.22.3.
...
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.22.3.
2018-04-26 10:23:58 +03:00
5e94ce9794
gnu: terminology: Update to 1.2.0.
...
* gnu/packages/enlightenment.scm (terminology): Update to 1.2.0.
[source]: Update source snippet.
[build-system]: Switch to meson-build-system.
[native-inputs]: Add perl.
2018-04-26 10:23:58 +03:00
dce50fbc91
gnu: retroarch: Fix hash.
...
* gnu/packages/emulators.scm (retroarch): Fix incorrect hash.
2018-04-26 08:54:04 +02:00
03e4589124
gnu: runc: Update comment about status of tests.
...
* gnu/packages/virtualization.scm (runc)[arguments]: Update comment.
2018-04-26 09:37:00 +08:00
eb88e2c11c
gnu: Add l-smash.
...
* gnu/packages/video.scm (l-smash): New variable.
2018-04-26 00:45:43 +02:00
37b9be5878
gnu: guile-sdl2: Require guile 2.2.
...
* gnu/packages/sdl.scm (guile-sdl2)[inputs]: Replace GUILE-2.0 with
GUILE-2.2.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-25 23:11:54 +02:00
a0bee5e769
gnu: Add emacs-evil-collection
...
* gnu/packages/emacs.scm (emacs-evil-collection): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-25 23:11:53 +02:00
b889df2722
gnu: Add emacs-helm-system-packages
...
* gnu/packages/emacs.scm (emacs-helm-system-packages): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-25 23:11:53 +02:00
0eb3b8c0b6
gnu: guile-sly: Update home-page.
...
* gnu/packages/guile.scm (guile-sly): Update home-page.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-25 23:11:53 +02:00
a9fe3882b9
Merge branch 'master' into staging
2018-04-25 15:53:41 +02:00
0afeda6521
gnu: multipath-tools: Update to 0.7.6.
...
* gnu/packages/linux.scm (multipath-tools): Update to 0.7.6.
2018-04-25 15:09:22 +02:00
5843dab8fb
gnu: fio: Update to 3.6.
...
* gnu/packages/benchmark.scm (fio): Update to 3.6.
2018-04-25 15:09:22 +02:00
3743e1320e
gnu: ceph: Update to 12.2.5.
...
* gnu/packages/patches/ceph-skip-collect-sys-info-test.patch: Adjust.
* gnu/packages/storage.scm (ceph): Update to 12.2.5.
2018-04-25 15:09:22 +02:00
8bf8dedc9a
gnu: rocksdb: Update to 5.12.4.
...
* gnu/packages/databases.scm (rocksdb): Update to 5.12.4.
2018-04-25 15:09:22 +02:00
d000264299
gnu: guile-ssh: Move files from bin to examples directory.
...
* gnu/packages/ssh.scm (guile-ssh): Move files from bin to the examples
directory.
2018-04-25 14:55:26 +02:00
5b862761f2
gnu: guix: Update to ab85cf7.
...
* gnu/packages/package-management.scm (guix): Update to ab85cf7
2018-04-25 14:28:28 +02:00
ab85cf7185
gnu: perl-business-isbn: Update to 3.004.
...
* gnu/packages/perl.scm (perl-business-isbn): Update to 3.004.
2018-04-25 11:47:13 +02:00
222999c989
gnu: ruby-domain-name: Update to 0.5.20180417.
...
* gnu/packages/ruby.scm (ruby-domain-name): Update to 0.5.20180417.
2018-04-25 11:47:13 +02:00
21acf56184
gnu: perl-type-tiny: Update to 1.002002.
...
* gnu/packages/perl.scm (perl-type-tiny): Update to 1.002002.
2018-04-25 11:47:12 +02:00
5854082a7a
gnu: ruby-ascii85: Update to 1.0.3.
...
* gnu/packages/ruby.scm (ruby-ascii85): Update to 1.0.3.
2018-04-25 11:47:12 +02:00
fe355a1f8d
gnu: youtube-dl: Update to 2018.04.25.
...
* gnu/packages/video.scm (youtube-dl): Update to 2018.04.25.
2018-04-25 11:42:20 +02:00
113e9bc5a4
gnu: diffoscope: Update to 93.
...
* gnu/packages/package-management.scm (diffoscope): Update to 93.
2018-04-25 11:31:41 +02:00
035ee04b89
gnu: parallel: Update to 20180422.
...
* gnu/packages/parallel.scm (parallel): Update to 20180422.
2018-04-25 11:26:52 +02:00
076fcab120
gnu: vulkan-icd-loader: Update to 1.1.73.0.
...
* gnu/packages/vulkan.scm (vulkan-icd-loader): Update to 1.1.73.0.
2018-04-25 11:18:34 +02:00
1a04c893fa
gnu: emacs-org, emacs-org-contrib: Update packages.
...
* gnu/packages/emacs.scm (emacs-org): Update to 9.1.11.
(emacs-org-contrib): Update to 20180423.
2018-04-25 09:57:11 +02:00
b24b19e3ff
gnu: retroarch: Update to 1.7.2.
...
* gnu/packages/emulators.scm (retroarch): Update to 1.7.2.
2018-04-24 23:33:09 +02:00
ba39d32807
gnu: linux-libre: Update to 4.16.4.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.16.4.
(%linux-libre-hash): Update hash.
2018-04-24 16:53:53 -04:00
feb477869e
gnu: linux-libre@4.14: Update to 4.14.36.
...
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.36.
(%linux-libre-4.14-hash): Update hash.
2018-04-24 16:53:51 -04:00
22789d97b0
gnu: linux-libre@4.9: Update to 4.9.96.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.96.
2018-04-24 16:53:49 -04:00
005ccea624
gnu: linux-libre@4.4: Update to 4.4.129.
...
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.129.
2018-04-24 16:53:47 -04:00
460292af30
gnu: qemu: Update to 2.12.0.
...
* gnu/packages/patches/qemu-CVE-2018-7550.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/virtualization.scm (qemu): Update to 2.12.0.
[source](patches): Remove.
2018-04-24 21:14:20 +02:00
a0a553dcf1
gnu: libraw: Update to 0.18.9.
...
* gnu/packages/photo.scm (libraw): Update to 0.18.9.
2018-04-24 21:14:20 +02:00
f0b85055c7
gnu: go@1.10: Update to 1.10.1 [fixes CVE-2018-7187].
...
* gnu/packages/golang.scm (go-1.10): Update to 1.10.1.
[arguments]: Disable the 'TestTwoPkgConfigs' test.
2018-04-24 13:07:08 -04:00
3f15744349
gnu: go@1.9: Update to 1.9.5 [fixes CVE-2018-7187].
...
* gnu/packages/golang.scm (go-1.9): Update to 1.9.5.
[arguments]: Disable the 'TestTwoPkgConfigs' test.
2018-04-24 13:07:07 -04:00
3f0ec617f5
gnu: go@1.4: Use the "real" pkg-config.
...
* gnu/packages/golang.scm (go-1.4)[native-inputs]: Use pkg-config instead of
%pkg-config.
2018-04-24 13:07:04 -04:00
a65d88f2a5
gnu: node: Update to 9.11.1.
...
* gnu/packages/node.scm (node): Update to 9.11.1.
2018-04-24 16:28:44 +02:00
0ef8cc9c1c
gnu: Add r-qdnaseq.
...
* gnu/packages/bioconductor.scm (r-qdnaseq): New variable.
2018-04-24 14:12:32 +02:00
67ee83d6c3
gnu: Add r-cghcall.
...
* gnu/packages/bioconductor.scm (r-cghcall): New variable.
2018-04-24 14:12:15 +02:00
0416a0d4d5
gnu: Add r-cghbase.
...
* gnu/packages/bioconductor.scm (r-cghbase): New variable.
2018-04-24 14:11:51 +02:00
164502d819
gnu: Add r-marray.
...
* gnu/packages/bioconductor.scm (r-marray): New variable.
2018-04-24 14:11:19 +02:00
fdc3a05d1b
gnu: Add r-snowfall.
...
* gnu/packages/cran.scm (r-snowfall): New variable.
2018-04-24 14:03:42 +02:00
793f83efe1
gnu: Add r-chippeakanno.
...
* gnu/packages/bioconductor.scm (r-chippeakanno): New variable.
2018-04-24 13:59:39 +02:00
a6ae9ffd6a
gnu: Add r-multtest.
...
* gnu/packages/bioconductor.scm (r-multtest): New variable.
2018-04-24 13:59:33 +02:00
09e3cf5834
gnu: ansible: Add missing inputs
...
* gnu/packages/admin.scm (ansible)[native-inputs]: Add python2-bcrypt and
python2-pynacl.
2018-04-24 14:45:27 +02:00
acc6e6955f
gnu: Add python2-pynacl.
...
* gnu/packages/python-crypto.scm (python2-pynacl): New variable.
2018-04-24 14:45:11 +02:00
6d94bf6baa
gnu: Add r-ripseeker.
...
* gnu/packages/bioconductor.scm (r-ripseeker): New variable.
2018-04-24 13:34:29 +02:00
a5b56a5346
gnu: Add r-diffbind.
...
* gnu/packages/bioconductor.scm (r-diffbind): New variable.
2018-04-24 13:33:56 +02:00
be65267f93
gnu: virt-viewer: Update to 6.0.
...
* gnu/packages/spice.scm (virt-viewer): Update to 6.0.
2018-04-24 12:14:37 +02:00
b45bfc9ca8
gnu: android-udev-rules: Update to 20180112.
...
* gnu/packages/android.scm (android-udev-rules): Update to 20180112.
2018-04-24 17:47:40 +08:00
c0069835b1
gnu: toxic: Update to 0.8.2.
...
* gnu/packages/messaging.scm (toxic): Update to 0.8.2.
2018-04-24 10:13:25 +02:00
089abfc143
gnu: qtox: Update to 1.15.0.
...
* gnu/packages/messaging.scm (qtox): Update to 1.15.0.
2018-04-24 10:13:25 +02:00
c11df2e879
gnu: utox: Update to 0.17.0.
...
* gnu/packages/messaging.scm (utox): Update to 0.17.0.
[source]: Use git-fetch instead of url-fetch.
[arguments]: Add "-DENABLE_TESTS=on" configure-flag.
2018-04-24 10:13:25 +02:00
230bd4bb60
gnu: c-toxcore: Update to 0.2.2.
...
* gnu/packages/messaging.scm (c-toxcore): Update to 0.2.2.
[arguments]: Disable tests.
2018-04-24 10:13:25 +02:00
d4bd876267
gnu: hop: Update hash of source tarball, which was modified in place.
...
Fixes <https://bugs.gnu.org/30804 >.
Reported by Tobias Geerinckx-Rice <me@tobias.gr>.
* gnu/packages/scheme.scm (hop)[source]: Update sha256.
2018-04-24 09:53:23 +02:00
d5a48184d1
gnu: fortune-mod: Use a stable URL for the CMake rules.
...
* gnu/packages/games.scm (fortune-mod)[inputs]: Use a stable URL for
"cmake-rules".
2018-04-24 09:53:23 +02:00
845688f009
gnu: grammalecte: Update to 0.6.4.
...
* gnu/packages/dictionaries.scm (grammalecte): Update to 0.6.4.
[arguments]: Remove unnecessary fix.
2018-04-23 22:32:03 +02:00
2784b35f90
gnu: moc: Remove obsolete snippet.
...
* gnu/packages/music.scm (moc)[source](snippet): Remove.
2018-04-23 20:03:24 +02:00
bb5c508c12
gnu: Use ffmpeg@3.4 in packages not ready for 4.0.
...
* gnu/packages/cdrom.scm (dvdstyler)[inputs]: Change FFMPEG with FFMPEG-3.4.
* gnu/packages/video.scm (mlt, motion, simplescreenrecorder)[inputs]: Likewise.
* gnu/packages/music.scm (moc, pianobar)[inputs]: Likewise.
2018-04-23 20:03:25 +02:00
0b909ab6bb
gnu: maim: Update to 5.5.
...
* gnu/packages/xdisorg.scm (maim): Update to 5.5.
2018-04-23 20:03:24 +02:00
89f9ffffe5
gnu: slop: Update to 7.4.
...
* gnu/packages/xdisorg.scm (slop): Update to 7.4.
2018-04-23 20:03:24 +02:00
68c4759baa
gnu: gstreamer: Downgrade to 1.12.5.
...
* gnu/packages/gstreamer.scm (gstreamer, gst-plugins-base, gst-plugins-good,
gst-plugins-bad, gst-plugins-ugly, gst-libav, python-gst): Downgrade to 1.12.5.
2018-04-23 19:47:49 +02:00
14534d7fcd
gnu: feh: Update to 2.26.
...
* gnu/packages/image-viewers.scm (feh): Update to 2.26.
2018-04-23 18:44:16 +02:00
b981f77722
gnu: libwebp: Update to 1.0.0.
...
* gnu/packages/image.scm (libwebp): Update to 1.0.0.
[source]: Change to GIT-FETCH.
[arguments]: Add 'bootstrap' phase.
2018-04-23 18:44:16 +02:00
050e575678
gnu: Add wpa-supplicant-gui.
...
* gnu/packages/admin.scm (wpa-supplicant-gui): New public variable.
2018-04-23 18:44:16 +02:00
06079c196c
gnu: ffmpeg: Update to 4.0.
...
* gnu/packages/video.scm (ffmpeg): Update to 4.0.
* gnu/packages/video.scm (ffmpeg@3.4): New variable.
* gnu/packages/video.scm (ffmpeg-git): Remove variable.
* gnu/packages/video.scm (mpv)[inputs]: Build with ffmpeg instead of ffmpeg-git.
* gnu/packages/gstreamer.scm (gst-libav)[inputs]: Build with ffmpeg@3.4 instead
of ffmpeg.
* gnu/packages/messaging.scm (qtox)[inputs]: Build with ffmpeg@3.4 instead of
ffmpeg.
* gnu/packages/emulators.scm (dolphin-emu)[inputs]: Build with ffmpeg@3.4
instead of ffmpeg.
* gnu/packages/gnunet.scm (libextractor)[inputs]: Build with ffmpeg@3.4 instead
of ffmpeg.
2018-04-23 15:44:39 +02:00
de7f03ce0a
gnu: Add runc.
...
* gnu/packages/virtualization.scm (runc): New variable.
2018-04-23 11:22:58 +08:00
0ed7498a46
gnu: Add src.
...
* gnu/packages/version-control.scm (src): New variable.
2018-04-23 11:22:58 +08:00
01224157b7
gnu: Add ocproxy.
...
* gnu/packages/vpn.scm (ocproxy): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-22 23:50:49 +02:00
c51e592d6c
gnu: Add emacs-elisp-slime-nav.
...
* gnu/packages/emacs.scm (emacs-elisp-slime-nav): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-22 23:50:49 +02:00
b8a251d76e
gnu: libfive: Snippet returns a Boolean.
...
Reported by Mark H Weaver <mhw@netris.org>.
* gnu/packages/engineering.scm (libfive)[source](snippet): Return #t.
2018-04-22 23:50:48 +02:00
3d7f9cbe75
gnu: pigx-chipseq: Update to 0.0.15.
...
* gnu/packages/bioinformatics.scm (pigx-chipseq): Update to 0.0.15.
2018-04-22 23:00:51 +02:00
3ae45eb435
audacity: Update to 2.2.2.
...
* gnu/packages/audio.scm (audacity): Update to 2.2.2.
2018-04-22 13:43:38 -04:00
5c1052039e
gnu: gcompris-qt: Update to 0.90.
...
* gnu/packages/education.scm (gcompris-qt): Update to 0.90.
[source, home-page]: Use https.
[arguments]: Add 'wrap-executable phase to declare the QT_PLUGIN_PATH
and QML2_IMPORT_PATH without needing propagated inputs.
[native-inputs]: Add qttools.
[inputs]: Remove qt, add qtbase, qtdeclarative, qtgraphicaleffects,
qtmultimedia, qtquickcontrols, qtsensors, qtsvg, qtxmlpatterns.
2018-04-22 15:57:22 +03:00
f347c24acc
gnu: freeimage: Use bundled libjxr.
...
* gnu/packages/image.scm (freeimage)[source]: Don't delete bundled
LibJXR directory.
[arguments]: Modify make-flags to not include external jxrlib.
[inputs]: Remove libjxr.
* gnu/packages/patches/freeimage-unbundle.patch: Modify to not unbundle
libjxr.
2018-04-22 12:20:15 +03:00
e33498b868
gnu: cran.scm: Add missing module.
...
This is a follow-up to 9ebfdcd36c
2018-04-22 09:43:36 +03:00
2cf42ec611
gnu: r-httpuv: Update to 1.4.1.
...
* gnu/packages/web.scm (r-httpuv): Update to 1.4.1.
2018-04-21 23:07:52 +02:00
c36ce47635
gnu: r-seurat: Update to 2.3.0.
...
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.3.0.
[propagated-inputs]: Add r-cluster, r-dosnow, r-fitdistrplus, r-foreach,
r-lmtest, r-png, and r-rann.
2018-04-21 23:07:52 +02:00
3cf9ae2f75
gnu: Add r-dosnow.
...
* gnu/packages/cran.scm (r-dosnow): New variable.
2018-04-21 23:07:52 +02:00
6ab97ed56a
gnu: r-lambda-r: Update to 1.2.2.
...
* gnu/packages/statistics.scm (r-lambda-r): Update to 1.2.2.
[arguments]: Remove.
[native-inputs]: Remove.
[propagated-inputs]: Add r-formatr.
2018-04-21 23:07:52 +02:00
5150a52d03
gnu: r-httpuv: Update to 1.4.0.
...
* gnu/packages/web.scm (r-httpuv): Update to 1.4.0.
[propagated-inputs]: Add r-bh, r-later, and r-promises.
2018-04-21 23:07:52 +02:00
d9d66ba963
gnu: Add r-promises.
...
* gnu/packages/cran.scm (r-promises): New variable.
2018-04-21 23:07:52 +02:00
284179bbb3
gnu: Add r-later.
...
* gnu/packages/cran.scm (r-later): New variable.
2018-04-21 23:07:52 +02:00
500224cb4c
gnu: r-car: Update to 3.0-0.
...
* gnu/packages/statistics.scm (r-car): Update to 3.0-0.
[propagated-inputs]: Add r-abind, r-cardata, r-lme4, r-maptools, r-nlme, and
r-rio.
2018-04-21 23:07:52 +02:00
08dac3d9e6
gnu: Add r-maptools.
...
* gnu/packages/cran.scm (r-maptools): New variable.
2018-04-21 23:07:52 +02:00
c9920f2597
gnu: Add r-rio.
...
* gnu/packages/cran.scm (r-rio): New variable.
2018-04-21 23:07:52 +02:00
4b1f7a3e90
gnu: Add r-openxlsx.
...
* gnu/packages/cran.scm (r-openxlsx): New variable.
2018-04-21 23:07:52 +02:00
0edd2fd186
gnu: r-ggridges: Update to 0.5.0.
...
* gnu/packages/cran.scm (r-ggridges): Update to 0.5.0.
[propagated-inputs]: Add r-withr.
2018-04-21 23:07:52 +02:00
4f18423358
gnu: r-ddalpha: Update to 1.3.2.
...
* gnu/packages/cran.scm (r-ddalpha): Update to 1.3.2.
[propagated-inputs]: Add r-geometry.
2018-04-21 23:07:52 +02:00
9604429d7b
gnu: Add r-geometry.
...
* gnu/packages/cran.scm (r-geometry): New variable.
2018-04-21 23:07:52 +02:00
ce4e81cb86
gnu: Add r-magic.
...
* gnu/packages/cran.scm (r-magic): New variable.
2018-04-21 23:07:52 +02:00
f1c7a24280
gnu: Add r-cardata.
...
* gnu/packages/statistics.scm (r-cardata): New variable.
2018-04-21 23:07:52 +02:00
2acc0e5f8f
gnu: r-gsubfn: Update to 0.7.
...
* gnu/packages/cran.scm (r-gsubfn): Update to 0.7.
2018-04-21 23:07:52 +02:00
7bd6ecd7fa
gnu: r-psych: Update to 1.8.3.3.
...
* gnu/packages/cran.scm (r-psych): Update to 1.8.3.3.
2018-04-21 23:07:52 +02:00
d087f47d61
gnu: r-quantmod: Update to 0.4-13.
...
* gnu/packages/cran.scm (r-quantmod): Update to 0.4-13.
2018-04-21 23:07:52 +02:00
cb9f404187
gnu: r-tinytex: Update to 0.5.
...
* gnu/packages/cran.scm (r-tinytex): Update to 0.5.
2018-04-21 23:07:52 +02:00
1d310349bb
gnu: r-xts: Update to 0.10-2.
...
* gnu/packages/cran.scm (r-xts): Update to 0.10-2.
2018-04-21 23:07:52 +02:00
2ab8cbcd1f
gnu: r-stringdist: Update to 0.9.4.7.
...
* gnu/packages/cran.scm (r-stringdist): Update to 0.9.4.7.
2018-04-21 23:07:52 +02:00
9ee81a36aa
gnu: r-prodlim: Update to 2018.04.18.
...
* gnu/packages/cran.scm (r-prodlim): Update to 2018.04.18.
2018-04-21 23:07:52 +02:00
3e00e3a885
gnu: r-lava: Update to 1.6.1.
...
* gnu/packages/cran.scm (r-lava): Update to 1.6.1.
2018-04-21 23:07:52 +02:00
9ebfdcd36c
gnu: r-rmpi: Update to 0.6-7.
...
* gnu/packages/cran.scm (r-rmpi): Update to 0.6-7.
[native-inputs]: Add pkg-config.
2018-04-21 23:07:52 +02:00
cf0da489ff
gnu: r-globaloptions: Update to 0.0.13.
...
* gnu/packages/cran.scm (r-globaloptions): Update to 0.0.13.
2018-04-21 23:07:52 +02:00
9f17c0560f
gnu: r-bindrcpp: Update to 0.2.2.
...
* gnu/packages/cran.scm (r-bindrcpp): Update to 0.2.2.
2018-04-21 23:07:52 +02:00
eb575e95fb
gnu: r-bindr: Update to 0.1.1.
...
* gnu/packages/cran.scm (r-bindr): Update to 0.1.1.
2018-04-21 23:07:52 +02:00
dfd7299957
gnu: r-rcpp: Update to 0.12.16.
...
* gnu/packages/cran.scm (r-rcpp): Update to 0.12.16.
2018-04-21 23:07:52 +02:00
0e94780446
gnu: r-plogr: Update to 0.2.0.
...
* gnu/packages/cran.scm (r-plogr): Update to 0.2.0.
2018-04-21 23:07:52 +02:00
1d612cefc8
gnu: r-readxl: Update to 1.1.0.
...
* gnu/packages/cran.scm (r-readxl): Update to 1.1.0.
2018-04-21 23:07:52 +02:00
41e8bd77f3
gnu: r-selectr: Update to 0.4-1.
...
* gnu/packages/cran.scm (r-selectr): Update to 0.4-1.
[propagated-inputs]: Add r-r6.
2018-04-21 23:07:52 +02:00
aeca5f0c5b
gnu: r-scran: Update to 1.6.9.
...
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.6.9.
2018-04-21 23:07:52 +02:00
80323c3c13
gnu: r-hitc: Update to 1.22.1.
...
* gnu/packages/bioinformatics.scm (r-hitc): Update to 1.22.1.
2018-04-21 23:07:52 +02:00
b6d7deca55
gnu: r-ldblock: Update to 1.8.1.
...
* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.8.1.
2018-04-21 23:07:52 +02:00
fb1dcfac46
gnu: r-erma: Update to 0.10.1.
...
* gnu/packages/bioinformatics.scm (r-erma): Update to 0.10.1.
2018-04-21 23:07:52 +02:00
8defca1d94
gnu: r-gprofiler: Update to 0.6.6.
...
* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.6.
2018-04-21 23:07:52 +02:00
fc6d3e2606
gnu: r-ggbio: Update to 1.26.1.
...
* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.26.1.
2018-04-21 23:07:52 +02:00
0bd5c7b859
gnu: r-genomicalignments: Update to 1.14.2.
...
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.14.2.
2018-04-21 23:07:52 +02:00
4207770218
gnu: r-dexseq: Update to 1.24.4.
...
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.24.4.
2018-04-21 23:07:52 +02:00
3db5d04ccc
gnu: r-vegan: Update to 2.5-1.
...
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.5-1.
[propagated-inputs]: Add r-knitr.
2018-04-21 23:07:52 +02:00
2ef5ab8749
gnu: r-mapproj: Update to 1.2.6.
...
* gnu/packages/geo.scm (r-mapproj): Update to 1.2.6.
2018-04-21 23:07:52 +02:00
5895f238d7
gnu: r-maps: Update to 3.3.0.
...
* gnu/packages/geo.scm (r-maps): Update to 3.3.0.
2018-04-21 23:07:52 +02:00
8cf7b28ffe
gnu: r-igraph: Update to 1.2.1.
...
* gnu/packages/graph.scm (r-igraph): Update to 1.2.1.
[inputs]: Add glpk and zlib.
[propagated-inputs]: Remove r-irlba.
2018-04-21 23:07:52 +02:00
2bcf5fd337
gnu: r-subplex: Update to 1.5-4.
...
* gnu/packages/maths.scm (r-subplex): Update to 1.5-4.
2018-04-21 23:07:52 +02:00
61c868e1f5
gnu: r-shinydashboard: Update to 0.7.0.
...
* gnu/packages/web.scm (r-shinydashboard): Update to 0.7.0.
2018-04-21 23:07:52 +02:00
4fe0efddfe
gnu: r-htmlwidgets: Update to 1.2.
...
* gnu/packages/web.scm (r-htmlwidgets): Update to 1.2.
2018-04-21 23:07:52 +02:00
75a40e89d9
gnu: r-lme4: Update to 1.1-17.
...
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-17.
2018-04-21 23:07:52 +02:00
30d76d442a
gnu: r-futile-options: Update to 1.0.1.
...
* gnu/packages/statistics.scm (r-futile-options): Update to 1.0.1.
2018-04-21 23:07:52 +02:00
4184649940
gnu: r-xml: Update to .
...
* gnu/packages/statistics.scm (r-xml): Update to .
2018-04-21 23:07:52 +02:00
ff91ed7d56
gnu: r-rsqlite: Update to 2.1.0.
...
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.1.0.
2018-04-21 23:07:52 +02:00
1aa2ad5b32
gnu: r-survival: Update to 2.42-3.
...
* gnu/packages/statistics.scm (r-survival): Update to 2.42-3.
2018-04-21 23:07:52 +02:00
6fa9cf1abb
gnu: r-nlme: Update to 3.1-137.
...
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-137.
2018-04-21 23:07:52 +02:00
ac6672d539
gnu: r-cluster: Update to 2.0.7-1.
...
* gnu/packages/statistics.scm (r-cluster): Update to 2.0.7-1.
2018-04-21 23:07:52 +02:00
c43ea99b39
gnu: r-minimal: Update to 3.4.4.
...
* gnu/packages/statistics.scm (r-minimal): Update to 3.4.4.
2018-04-21 23:07:52 +02:00
785f40dfbc
gnu: spindle: Limit supported systems.
...
* gnu/packages/admin.scm (spindle)[supported-system]: New field.
2018-04-21 23:25:42 +03:00
Tobias Geerinckx-Rice