Commit Graph

33163 Commits

Author SHA1 Message Date
Danny Milosavljevic f57693e17c
gnu: groff: Disable relocatability.
* gnu/packages/groff.scm (groff)[arguments]<#:phases>[disable-relocatability]:
New phase.
2019-01-16 15:15:30 +01:00
Clément Lassieur be1ce9fd31
gnu: Add prosody-smacks.
* gnu/packages/messaging.scm (prosody-smacks): New variable.
2019-01-16 14:26:06 +01:00
Pkill -9 a42bdd1c22
gnu: obs: Update to 22.0.3.
* gnu/packages/video.scm (obs): Update to 22.0.3.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-16 14:07:38 +01:00
nee ab100b905f
gnu: grub: Add dependency on console-setup.
* gnu/packages/bootloaders.scm (grub)[arguments]: In 'patch-stuff'
phase, patch 'grub-kbdcomp.in'.
[inputs]: Add CONSOLE-SETUP.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-01-16 14:07:38 +01:00
Ludovic Courtès 5f7467f046
bootloader: Remove deprecated 'device' field.
The 'device' field had been deprecated in commit
045ebb3e58 (August 2017).

* gnu/bootloader.scm (<bootloader-configuration>)[device]: Remove.
[target]: Change getter to 'bootstrap-configuration-target'.
(bootstrap-configuration-target): Remove.
2019-01-16 14:07:38 +01:00
Ludovic Courtès 5c215c9e47
install: Avoid deprecated 'gpm-service' procedure.
* gnu/system/install.scm (%installation-services): Use the 'service'
form instead of 'gpm-service'.
2019-01-16 14:07:37 +01:00
Ludovic Courtès 2e04ab7147
services: avahi: Deprecate the 'avahi-service' procedure.
* gnu/services/avahi.scm (<avahi-configuration>): Export getters.  Add
default values.
(avahi-service-type)[default-value]: New field.
(avahi-service): Mark as deprecated.
* gnu/services/desktop.scm (%desktop-services): Use the 'service' form
instead of calling 'avahi-service'.
* gnu/tests/base.scm (%avahi-os): Likewise.
* doc/guix.texi (Base Services): Adjust example accordingly.
(Networking Services): Update accordingly.
2019-01-16 14:07:37 +01:00
Efraim Flashner 39ad752cf9
gnu: kodi: Skip failing test.
* gnu/packages/kodi.scm (kodi)[source]: Add patch.
* gnu/packages/patches/kodi-skip-test-449.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2019-01-16 11:59:35 +02:00
Pierre Neidhardt be0be3dee0
gnu: Add meld.
* gnu/packages/patchutils.scm (meld): New variable.
2019-01-16 10:44:23 +01:00
nee 41a54622b6
gnu: Add console-setup.
* gnu/packages/xorg.scm (console-setup): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-01-15 23:16:20 +01:00
Ludovic Courtès fe77ede70a
gnu: Add bdfresize.
* gnu/packages/xorg.scm (bdfresize): New variable.
2019-01-15 23:16:20 +01:00
Kei Kebreau 8fb8afd98c
gnu: hyperrogue: Update to 10.5d.
* gnu/packages/games.scm (hyperrogue): Update to 10.5d.
2019-01-15 14:48:59 -05:00
Jelle Licht b03131902e
gnu: emacs-closql: Fix hash.
* gnu/packages/emacs.scm (emacs-closql)[source]: Fix incorrect hash.
2019-01-15 20:28:37 +01:00
Ludovic Courtès 0ea939fb79
guix package: '--list-available' can use data from the cache.
* gnu/packages.scm (fold-available-packages): New procedure.
* guix/scripts/package.scm (process-query): Use it instead of
'fold-packages'.
* tests/packages.scm ("fold-available-packages with/without cache"):
New test.
2019-01-15 20:24:09 +01:00
Ludovic Courtès ee8099f5b6
edit: Use 'specification->location' to read information from the cache.
That way 'guix edit' doesn't need to load any package module.

* gnu/packages.scm (find-package-locations, specification->location):
New procedures.
* guix/scripts/edit.scm (package->location-specification): Rename to...
(location->location-specification): ... this.  Expect a location object
instead of a package.
(guix-edit): Use 'specification->location' instead of
'specification->package'.
* tests/packages.scm ("find-package-locations")
("find-package-locations with cache")
("specification->location"): New tests.
2019-01-15 20:24:09 +01:00
Ludovic Courtès 5fbdc9a5aa
channels: Compute a package cache and use it.
* gnu/packages.scm (cache-is-authoritative?, load-package-cache)
(cache-lookup, generate-package-cache): New procedures.
(%package-cache-file): New variable.
(find-packages-by-name): Rename to...
(find-packages-by-name/direct): ... this.
(find-packages-by-name): Rewrite to use the package cache when
'cache-is-authoritative?' returns true.
* tests/packages.scm ("find-packages-by-name + version, with cache")
("find-packages-by-name with cache"): New tests.
* guix/channels.scm (package-cache-file): New procedure.
(%channel-profile-hooks): New variable.
(channel-instances->derivation): Use it in #:hooks.
* guix/scripts/package.scm (build-and-use-profile): Add #:hooks and
honor it.
* guix/scripts/pull.scm (build-and-install): Pass #:hooks to
UPDATE-PROFILE.
2019-01-15 20:24:09 +01:00
Ludovic Courtès e2a903c807
packages: Remove 'find-newest-available-packages'.
Since commit 9ffc1c00e5,
'find-newest-available-packages' and 'find-packages-by-name' were both
building a vhash mapping package names to packages.  This factorizes
this bit, also reducing I/O, CPU, and memory usage.

* gnu/packages.scm (find-best-packages-by-name): Remove.
(find-best-packages-by-name): Use 'find-packages-by-name' instead of
'find-newest-available-packages'.
2019-01-15 20:24:09 +01:00
Gabriel Hondet eac7ed195b
gnu: Add gauche.
* gnu/packages/scheme.scm (gauche): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-15 20:24:08 +01:00
Ricardo Wurmus 4fec042b54
gnu: Move Python compression packages to new module.
* gnu/packages/compression.scm (python-lzo, python2-lzo, python-lz4,
python2-lz4, python-lzstring, python2-lzstring, bitshuffle,
bitshuffle-for-snappy): Move variables from here...
* gnu/packages/python-compression.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/bioinformatics.scm,
gnu/packages/java-compression.scm,
gnu/packages/xorg.scm: Adjust module references.
2019-01-15 17:45:33 +01:00
Ricardo Wurmus 22e623aef0
gnu: Add python-grpcio.
* gnu/packages/python-xyz.scm (python-grpcio): New variable.
2019-01-15 17:27:34 +01:00
Ricardo Wurmus 2884aac071
gnu: Add python-gast.
* gnu/packages/python-xyz.scm (python-gast): New variable.
2019-01-15 17:27:34 +01:00
Ricardo Wurmus 79869f8064
gnu: Add python-astunparse.
* gnu/packages/python-xyz.scm (python-astunparse): New variable.
2019-01-15 17:27:34 +01:00
Ricardo Wurmus 81bed4e92b
gnu: Add python-astor.
* gnu/packages/python-xyz.scm (python-astor): New variable.
2019-01-15 17:27:34 +01:00
Ricardo Wurmus d0446c4b55
gnu: Add python-absl-py.
* gnu/packages/python-xyz.scm (python-absl-py): New variable.
2019-01-15 17:27:34 +01:00
Ricardo Wurmus c22c803efc
gnu: Add protobuf-next.
* gnu/packages/protobuf.scm (protobuf-next): New variable.
2019-01-15 17:27:34 +01:00
Ricardo Wurmus e2931e9979
gnu: Add c-ares-next.
* gnu/packages/adns.scm (c-ares-next): New variable.
2019-01-15 17:27:34 +01:00
Danny Milosavljevic 9210a6c082
gnu: yosys: Update to 0.8.
* gnu/packages/fpga.scm (yosys): Update to 0.8.
2019-01-15 16:46:45 +01:00
Danny Milosavljevic eccd3f6d2e
gnu: arachne-pnr: Fix tests.
* gnu/packages/fpga.scm (arachne-pnr)[arguments]: Add #:make-flags.
<#:phases>[configure]: Remove Makefile substitution.
2019-01-15 16:46:45 +01:00
Danny Milosavljevic 72dd271cee
gnu: icestorm: Update to 0.0-2-c0cbae88a.
* gnu/packages/fpga.scm (icestorm): Update to 0.0-2-c0cbae88a.
2019-01-15 16:46:45 +01:00
Amin Bandali e82baf69f1
gnu: arachne-pnr: Update to 840bdfdeb.
* gnu/packages/fpga.scm (arachne-pnr): Update to 840bdfdeb.
2019-01-15 16:46:43 +01:00
swedebugia 357b9f9d71
gnu: Rename sshfs-fuse to sshfs.
* gnu/packages/linux.scm (sshfs): New variable.
(sshfs-fuse): Mark as superseded.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-01-15 10:45:45 -05:00
Ricardo Wurmus 5327e912a8
gnu: Add missing module reference.
This is a follow-up to commit 44d10b1f72.

* gnu/packages/tex.scm: Add missing reference to python-xyz.
2019-01-15 14:58:13 +01:00
Ricardo Wurmus 44d10b1f72
gnu: Separate Python core packages from the rest.
* gnu/packages/python.scm: Move hundreds of package definitions from here...
* gnu/packages/python-xyz.scm: ...to this new module.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/ada.scm,
gnu/packages/admin.scm,
gnu/packages/android.scm,
gnu/packages/audio.scm,
gnu/packages/backup.scm,
gnu/packages/benchmark.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/bittorrent.scm,
gnu/packages/calendar.scm,
gnu/packages/check.scm,
gnu/packages/chemistry.scm,
gnu/packages/cluster.scm,
gnu/packages/compression.scm,
gnu/packages/connman.scm,
gnu/packages/crypto.scm,
gnu/packages/cups.scm,
gnu/packages/databases.scm,
gnu/packages/dav.scm,
gnu/packages/direct-connect.scm,
gnu/packages/disk.scm,
gnu/packages/django.scm,
gnu/packages/dlang.scm,
gnu/packages/docker.scm,
gnu/packages/ebook.scm,
gnu/packages/elf.scm,
gnu/packages/emacs.scm,
gnu/packages/emulators.scm,
gnu/packages/engineering.scm,
gnu/packages/enlightenment.scm,
gnu/packages/finance.scm,
gnu/packages/fltk.scm,
gnu/packages/fontutils.scm,
gnu/packages/freedesktop.scm,
gnu/packages/game-development.scm,
gnu/packages/games.scm,
gnu/packages/geo.scm,
gnu/packages/gl.scm,
gnu/packages/glib.scm,
gnu/packages/gnome.scm,
gnu/packages/gnupg.scm,
gnu/packages/gnuzilla.scm,
gnu/packages/graph.scm,
gnu/packages/graphics.scm,
gnu/packages/graphviz.scm,
gnu/packages/gtk.scm,
gnu/packages/ham-radio.scm,
gnu/packages/image-processing.scm,
gnu/packages/image-viewers.scm,
gnu/packages/image.scm,
gnu/packages/irc.scm,
gnu/packages/jrnl.scm,
gnu/packages/julia.scm,
gnu/packages/kde-frameworks.scm,
gnu/packages/key-mon.scm,
gnu/packages/libffi.scm,
gnu/packages/libreoffice.scm,
gnu/packages/libusb.scm,
gnu/packages/lirc.scm,
gnu/packages/logging.scm,
gnu/packages/machine-learning.scm,
gnu/packages/mail.scm,
gnu/packages/mate.scm,
gnu/packages/maths.scm,
gnu/packages/medical.scm,
gnu/packages/messaging.scm,
gnu/packages/monitoring.scm,
gnu/packages/mp3.scm,
gnu/packages/mpd.scm,
gnu/packages/music.scm,
gnu/packages/networking.scm,
gnu/packages/nutrition.scm,
gnu/packages/openldap.scm,
gnu/packages/openstack.scm,
gnu/packages/package-management.scm,
gnu/packages/password-utils.scm,
gnu/packages/patchutils.scm,
gnu/packages/pdf.scm,
gnu/packages/photo.scm,
gnu/packages/polkit.scm,
gnu/packages/protobuf.scm,
gnu/packages/python-crypto.scm,
gnu/packages/python-web.scm,
gnu/packages/qt.scm,
gnu/packages/rdf.scm,
gnu/packages/ruby.scm,
gnu/packages/search.scm,
gnu/packages/selinux.scm,
gnu/packages/serialization.scm,
gnu/packages/shells.scm,
gnu/packages/simulation.scm,
gnu/packages/ssh.scm,
gnu/packages/statistics.scm,
gnu/packages/storage.scm,
gnu/packages/sync.scm,
gnu/packages/terminals.scm,
gnu/packages/textutils.scm,
gnu/packages/time.scm,
gnu/packages/tls.scm,
gnu/packages/tor.scm,
gnu/packages/tryton.scm,
gnu/packages/version-control.scm,
gnu/packages/video.scm,
gnu/packages/virtualization.scm,
gnu/packages/vpn.scm,
gnu/packages/web-browsers.scm,
gnu/packages/web.scm,
gnu/packages/wicd.scm,
gnu/packages/xdisorg.scm,
gnu/packages/xorg.scm: Update module references.
2019-01-15 14:46:44 +01:00
Danny Milosavljevic f370509096
gnu: docker-cli: Don't install the same executable twice.
Reported by Meiyo Peng <meiyo.peng@gmail.com>.

* gnu/packages/docker.scm (docker-cli)[arguments]<#:phases>[install]:
Don't install the same executable twice.
2019-01-15 13:32:09 +01:00
Ricardo Wurmus c4153008f7
gnu: python-numpy-documentation: Add missing packages to texlive-union.
* gnu/packages/python.scm (python-numpy-documentation)[native-inputs]: Add
texlive-fonts-cm-super and texlive-latex-needspace to texlive-union.
2019-01-15 13:05:22 +01:00
Ricardo Wurmus 24d0c4d0eb
gnu: texlive-fonts-amsfonts: Install type1 fonts.
* gnu/packages/tex.scm (texlive-fonts-amsfonts)[native-inputs]: Fetch type1
font files.
[arguments]: Install them.
2019-01-15 13:05:22 +01:00
Ricardo Wurmus 1574932deb
gnu: texlive-bin: Do not truncate output lines.
* gnu/packages/tex.scm (texlive-bin)[arguments]: Change default line limits in
build phase.
2019-01-15 13:05:22 +01:00
Ricardo Wurmus 769bb5e56b
gnu: Add texlive-luatex-luaotfload.
* gnu/packages/tex.scm (texlive-luatex-luaotfload): New variable.
2019-01-15 13:05:22 +01:00
Ricardo Wurmus c2a1fe4ad2
gnu: Add texlive-fonts-lm.
* gnu/packages/tex.scm (texlive-fonts-lm): New variable.
2019-01-15 13:05:22 +01:00
Ricardo Wurmus 4e9242aaeb
gnu: Add texlive-fonts-cm-super.
* gnu/packages/tex.scm (texlive-fonts-cm-super): New variable.
2019-01-15 13:05:22 +01:00
Ricardo Wurmus d7da23721a
gnu: texlive-union: Implement in terms of texlive-base.
* gnu/packages/tex.scm (texlive-union): Inherit from texlive-base.
2019-01-15 13:05:22 +01:00
Ricardo Wurmus bfcb9d4dbf
gnu: Add texlive-base.
* gnu/packages/tex.scm (texlive-base): New variable.
2019-01-15 13:05:22 +01:00
Ricardo Wurmus a1b4d62cda
gnu: texlive-bin: Add native search paths.
* gnu/packages/tex.scm (texlive-bin)[native-search-paths]: Add specifications
for TEXMF and TEXMFCNF.
2019-01-15 13:05:22 +01:00
Ricardo Wurmus 476f7fceb7
gnu: texlive-union: Wrap programs weakly.
* gnu/packages/tex.scm (texlive-union)[arguments]: Wrap programs with TEXMFCNF
and TEXMF so that environment variables take precedence.
2019-01-15 13:05:22 +01:00
Ricardo Wurmus 9c45beb4cc
gnu: texlive-latex-fontspec: Install default fontspec.cfg.
* gnu/packages/tex.scm (texlive-latex-fontspec)[arguments]: Add build phase to
install fontspec.cfg.
2019-01-15 13:05:22 +01:00
Efraim Flashner ebe0271aa0
gnu: opencv: Update configure flags.
* gnu/packages/image-processing.scm (opencv)[arguments]: Change the
configure-flags on a per-architecture basis.
2019-01-15 13:20:14 +02:00
Danny Milosavljevic 49ec5d88c5
tests: docker: Run a guest guile inside the docker container.
* gnu/tests/docker.scm (run-docker-test): Add parameters.  Load and run
docker container.  Check response of guest guile.
(build-tarball&run-docker-test): New procedure.
(%test-docker): Use it.
[description]: Modify.
2019-01-15 12:16:46 +01:00
Ludovic Courtès 74a8b2cca1
gnu: guile-commonmark: Install .scm files in the right place.
Previously they'd be installed in PREFIX/share/share/guile/site.

* gnu/packages/guile.scm (guile-commonmark)[modules, snippet]: New
fields.
2019-01-15 12:05:21 +01:00
Arun Isaac 6aa4f09eb6
gnu: font-dosis: Switch to font-build-system.
* gnu/packages/fonts.scm (font-dosis): Switch to font-build-system.
[source]: Use url-fetch/zipbomb.
[native-inputs]: Remove unzip.
2019-01-15 15:27:54 +05:30
Jonathan Brielmaier 4deeb1ed06
gnu: Add missing patch to local.mk.
This was forgotten in ab533c613e.

* gnu/local.mk (dist_patch_DATA): Add
"allegro-fix-compilation-mesa-18.2.5-and-later.patch".

Signed-off-by: Jonathan Brielmaier <jbrielmaier@suse.de>
2019-01-15 11:50:27 +02:00
Clément Lassieur 67c05f587a
gnu: python-git-review: Update to 1.27.0.
* gnu/packages/openstack.scm (python-git-review): Update to 1.27.0.
[arguments]: Get the 'wrap-program' phase to return #t.
2019-01-15 10:49:18 +01:00
Clément Lassieur 104e1d55c7
gnu: prosody: Update to 0.11.2.
* gnu/packages/messaging.scm (prosody): Update to 0.11.2.
2019-01-15 10:49:18 +01:00
Efraim Flashner 38f18309e1
gnu: youtube-dl: Update to 2019.01.10.
* gnu/packages/video.scm (youtube-dl): Update to 2019.01.10.
[source]: Update uri.
2019-01-15 09:42:17 +02:00
Ludovic Courtès e98c354d1a
gnu: guile-ssh: Use 'git-fetch'.
* gnu/packages/ssh.scm (guile-ssh)[source]: Change to 'git-fetch'.
2019-01-14 23:43:49 +01:00
Ludovic Courtès a8b0556ea1
gnu: libssh: Update to 0.8.6.
* gnu/packages/patches/libssh-hostname-parser-bug.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/ssh.scm (libssh): Update to 0.8.6.
[source](patches): Remove.
[arguments]: Add #:phases.
(guile-ssh)[source](modules, snippet]: New fields.
2019-01-14 23:43:49 +01:00
Ludovic Courtès 152d4076a4
gnu: guile-json: Add 3.1.0.
* gnu/packages/guile.scm (guile-json-3): New variable.
2019-01-14 23:43:49 +01:00
Ricardo Wurmus 21b41a79fe
gnu: Move Perl compression packages to new module.
* gnu/packages/compression.scm (perl-compress-raw-bzip2,
perl-compress-raw-zlib, perl-io-compress, perl-archive-zip,
perl-archive-extract): Move from here...
* gnu/packages/perl-compression.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/ci.scm, gnu/packages/libreoffice.scm, gnu/packages/perl.scm:
Adjust references.
2019-01-14 18:12:54 +01:00
Ricardo Wurmus b80ecc5a63
gnu: texlive-latex-fontspec: Propagate l3packages.
* gnu/packages/tex.scm (texlive-latex-fontspec)[inputs]: Remove
texlive-latex-l3kernel.
[propagated-inputs]: Add texlive-latex-l3packages.
2019-01-14 15:42:32 +01:00
Ricardo Wurmus 2fea7041a3
gnu: texlive-latex-l3packages: Propagate l3kernel.
* gnu/packages/tex.scm (texlive-latex-l3packages)[inputs]: Move
texlive-latex-l3kernel from here...
[propagated-inputs]: ...to here.
2019-01-14 15:39:22 +01:00
Ricardo Wurmus 73635e3f69
gnu: Add texlive-latex-changepage.
* gnu/packages/tex.scm (texlive-latex-changepage): New variable.
2019-01-14 14:13:21 +01:00
Ricardo Wurmus 6309d21579
gnu: Add texlive-generic-babel-german.
* gnu/packages/tex.scm (texlive-generic-babel-german): New variable.
2019-01-14 14:13:21 +01:00
Ricardo Wurmus d68c8017f1
gnu: texlive-latex-base: Install configuration files.
* gnu/packages/tex.scm (texlive-latex-base)[arguments]: Install all
configuration files.
[native-inputs]: Move texlive-generic-hyph-utf8 from here...
[propagated-inputs]: ...to here.
2019-01-14 14:13:21 +01:00
Efraim Flashner 6c56e9c493
gnu: opencv: Use 'git-fetch'.
* gnu/packages/image-processing.scm (opencv)[source]: Use 'git-fetch'.
[native-inputs]: Use 'git-fetch' for opencv_extras and opencv_contrib.
Remove unzip.
[arguments]: Update custom 'unpack-submodule-sources accordingly. Update
paths in configure-flags, 'diable-broken-tests phase.
2019-01-14 15:07:42 +02:00
Efraim Flashner 7b28210531
gnu: python-django-filter: Use 'invoke'.
* gnu/packages/django.scm (python-django-filter)[arguments]: Use
'invoke'.
2019-01-14 15:07:42 +02:00
Efraim Flashner 8e21fa0bd3
gnu: opencv: Loosen test suite failures.
* gnu/packages/image-processing.scm (opencv)[native-inputs]: Add patch
to opencv-contrib.
[arguments]: Update 'unpack-submodule-sources phase.
* gnu/packages/patches/opencv-rgbd-aarch64-test-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2019-01-14 15:07:42 +02:00
Efraim Flashner fdeb2def6a
gnu: opencv: Update configure flags.
* gnu/packages/image-processing.scm (opencv)[arguments]: Don't use
precompiled headers. Enable all available CPU optimizations.
2019-01-14 15:07:42 +02:00
Efraim Flashner b5baf9529e
gnu: opencv: Don't hardcode build directories.
* gnu/packages/image-processing.scm (opencv)[arguments]: Change
OPENCV_EXTRA_MODULES_PATH and OPENCV_TEST_DATA_PATH to use 'getcwd'
instead of hardcoding the build path.
2019-01-14 15:07:41 +02:00
Efraim Flashner 6949f45c10
gnu: opencv: Fix building on non-x86_64 systems.
* gnu/packages/image-processing.scm (opencv)[arguments]: Add
configure-flag to disable carotene. Don't require x86_64 CPU
except on x86_64. Fix typo.
2019-01-14 15:07:41 +02:00
Efraim Flashner c5c42f0a9c
gnu: gnurl: Update to 7.63.0.
* gnu/packages/gnunet.scm (gnurl): Update to 7.63.0.
2019-01-14 13:57:49 +02:00
Clément Lassieur 6e46be066a
gnu: emacs-pass: Update to 1.8.
* gnu/packages/emacs.scm (emacs-pass): Update to 1.8.
2019-01-14 12:33:46 +01:00
Rutger Helling 478040d4fb
gnu: dosbox: Update to 0.74-2.
* gnu/packages/emulators.scm (dosbox): Update to 0.74-2.
[arguments]: Use invoke in 'autogen.sh phase.
2019-01-14 09:08:04 +01:00
Mark H Weaver 72b308364f
gnu: linux-libre: Update to 4.20.2.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.20.2.
(%linux-libre-hash): Update hash.
2019-01-14 01:29:47 -05:00
Mark H Weaver 8fa75a2266
gnu: linux-libre@4.19: Update to 4.19.15.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.15.
(%linux-libre-4.19-hash): Update hash.
2019-01-14 01:28:02 -05:00
Mark H Weaver 8b2aabd9d9
gnu: linux-libre@4.14: Update to 4.14.93.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.93.
(%linux-libre-4.14-hash): Update hash.
2019-01-14 01:26:21 -05:00
Mark H Weaver e724e1543a
gnu: linux-libre@4.9: Update to 4.9.150.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.150.
2019-01-14 01:25:28 -05:00
Mark H Weaver 0dd2a4f324
gnu: linux-libre@4.4: Update to 4.4.170.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.170.
2019-01-14 01:24:40 -05:00
Gabriel Hondet 64d25f0be2
gnu: Add ocaml-merlin.
* gnu/packages/ocaml.scm (ocaml-merlin): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-13 23:30:15 +01:00
Gabriel Hondet cc353cc067
gnu: Add emacs-tldr.
* gnu/packages/emacs.scm (emacs-tldr): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-13 23:30:15 +01:00
Meiyo Peng 5144df2c6c
system: Add sudoedit to %setuid-programs.
* gnu/system.scm (%setuid-programs): Add sudoedit.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-13 23:30:15 +01:00
Christopher Baines 24a23bea20
gnu: Add python-miniboa.
python2-miniboa is required for the linkchecker testsuite.

* gnu/packages/python.scm (python-miniboa, python2-miniboa): New variable.
2019-01-13 20:47:40 +00:00
Christopher Baines c4aa1ebc81
gnu: python-pillow: Update to 5.4.1.
I'm looking at this, as this release fixes an issue with the Django testsuite:

https://github.com/python-pillow/Pillow/pull/3525

* gnu/packages/python.scm (python-pillow): Update to 5.4.1.
2019-01-13 17:09:52 +00:00
Ricardo Wurmus 14bba460ab
gnu: r-biocgenerics: Move to bioconductor.
* gnu/packages/bioinformatics.scm (r-biocgenerics): Move from here...
* gnu/packages/bioconductor.scm (r-biocgenerics): ...to here.
2019-01-13 13:04:18 +01:00
Ricardo Wurmus 7097c7009d
gnu: r-annotate: Move to bioconductor.
* gnu/packages/bioinformatics.scm (r-annotate): Move from here...
* gnu/packages/bioconductor.scm (r-annotate): ...to here.
2019-01-13 13:04:18 +01:00
Ricardo Wurmus c80fb90f4a
gnu: r-vegan: Move from bioinformatics to cran.
* gnu/packages/bioinformatics.scm (r-vegan): Move from here...
* gnu/packages/cran.scm (r-vegan): ...to here.
2019-01-13 13:04:18 +01:00
Efraim Flashner d691e96657
gnu: conda: Use 'invoke'.
* gnu/packages/package-management.scm (conda)[arguments]: Use 'invoke'.
2019-01-13 12:44:03 +02:00
Efraim Flashner 675e7bba3e
gnu: python-conda: All phases return #t.
* gnu/packages/package-management.scm (python-conda)[arguments]: Use
'invoke'.
2019-01-13 12:44:03 +02:00
Efraim Flashner e227f248a6
gnu: python-conda: Fix test suite.
* gnu/packages/package-management.scm (python-conda)[native-inputs]: Add
python-cytoolz.
2019-01-13 12:44:00 +02:00
Ricardo Wurmus 82acd43cbd
gnu: Add r-raster.
* gnu/packages/cran.scm (r-raster): New variable.
2019-01-13 11:14:44 +01:00
Ricardo Wurmus 104e7c3c92
gnu: r-ggformula: Update to 0.9.1.
* gnu/packages/cran.scm (r-ggformula): Update to 0.9.1.
2019-01-13 11:14:43 +01:00
Ricardo Wurmus 3fe45dda0a
gnu: r-tibble: Update to 2.0.1.
* gnu/packages/statistics.scm (r-tibble): Update to 2.0.1.
2019-01-13 11:14:43 +01:00
Ricardo Wurmus 523762e332
gnu: r-psych: Update to 1.8.12.
* gnu/packages/cran.scm (r-psych): Update to 1.8.12.
2019-01-13 11:14:43 +01:00
Efraim Flashner d5fa25a5a0
gnu: bitshuffle: Fix build on armhf-linux.
* gnu/packages/compression.scm (bitshuffle)[arguments]: Add custom phase
to only use NEON on aarch64.
2019-01-13 11:31:04 +02:00
Rutger Helling 15d2cebf45
gnu: wine-staging: Update to 4.0-rc6.
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 4.0-rc6.
* gnu/packages/wine.scm (wine-staging): Update to 4.0-rc6.
2019-01-13 10:14:49 +01:00
Ricardo Wurmus c8d8925647
gnu: Sort package module references in (gnu packages graphviz).
* gnu/packages/graphviz.scm: Sort package module references; delete
duplicates.
2019-01-13 10:07:06 +01:00
Ricardo Wurmus 8b1c0dab45
gnu: Add python-pygraphviz.
* gnu/packages/graphviz.scm (python-pygraphviz): New variable.
2019-01-13 10:07:06 +01:00
Ricardo Wurmus 9e7f55de45
gnu: Add python-doctest-ignore-unicode.
* gnu/packages/python.scm (python-doctest-ignore-unicode): New variable.
2019-01-13 10:07:06 +01:00
Ricardo Wurmus c016e390bf
gnu: Add graphviz-2.38.
* gnu/packages/graphviz.scm (graphviz-2.38): New variable.
2019-01-13 10:07:06 +01:00
Marius Bakke 1710ffa4c7
gnu: sudo: Update to 1.8.27.
* gnu/packages/admin.scm (sudo): Update to 1.8.27.
2019-01-13 01:25:18 +01:00
Marius Bakke cb3e055f86
gnu: libassuan: Update to 2.5.2.
* gnu/packages/gnupg.scm (libassuan): Update to 2.5.2.
2019-01-13 01:25:17 +01:00
Marius Bakke 66470a5ad0
gnu: libgxps: Update to 0.3.1.
* gnu/packages/gnome.scm (libgxps): Update to 0.3.1.
2019-01-13 01:25:17 +01:00
Marius Bakke ad55c19211
gnu: libqmi: Update to 1.22.0.
* gnu/packages/freedesktop.scm (libqmi): Update to 1.22.0.
2019-01-13 01:25:17 +01:00
Marius Bakke de261ace27
gnu: libmbim: Update to 1.18.0.
* gnu/packages/freedesktop.scm (libmbim): Update to 1.18.0.
2019-01-13 01:25:17 +01:00
Marius Bakke 8bcae1e60c
gnu: libsodium: Update to 1.0.17.
* gnu/packages/crypto.scm (libsodium): Update to 1.0.17.
2019-01-13 01:25:17 +01:00
Marius Bakke 0b014776c9
gnu: exempi: Update to 2.5.0.
* gnu/packages/freedesktop.scm (exempi): Update to 2.5.0.
2019-01-13 01:25:17 +01:00
Marius Bakke 00262db23a
gnu: seabios: Update to 1.12.0.
* gnu/packages/firmware.scm (seabios): Update to 1.12.0.
2019-01-13 01:25:17 +01:00
Marius Bakke b2e765de4c
gnu: httpd: Update to 2.4.37.
* gnu/packages/web.scm (httpd): Update to 2.4.37.
2019-01-13 01:25:17 +01:00
Marius Bakke 1d7fbe0947
gnu: nasm: Update license.
* gnu/packages/assembly.scm (nasm)[license]: Change to BSD-2.
2019-01-13 01:25:16 +01:00
Marius Bakke 80459f5a21
gnu: nasm: Update home page.
* gnu/packages/assembly.scm (nasm)[home-page]: Use HTTPS.
2019-01-13 01:25:16 +01:00
Marius Bakke 9f1448b74a
gnu: libgphoto2: Update to 2.5.22.
* gnu/packages/photo.scm (libgphoto2): Update to 2.5.22.
2019-01-13 01:25:16 +01:00
Marius Bakke ef61969c52
gnu: re2: Update to 2019-01-01.
* gnu/packages/regex.scm (re2): Update to 2019-01-01.
2019-01-13 01:25:16 +01:00
Marius Bakke c06ef010e3
gnu: libsecret: Update to 0.18.7.
* gnu/packages/gnome.scm (libsecret): Update to 0.18.7.
[native-inputs]: Remove INTLTOOL.  Add GETTEXT-MINIMAL.
2019-01-13 01:25:16 +01:00
Marius Bakke 48d5818a0e
gnu: fluidsynth: Update to 2.0.3.
* gnu/packages/audio.scm (fluidsynth): Update to 2.0.3.
2019-01-13 01:25:16 +01:00
Marius Bakke bf135622bd
gnu: rofi: Update to 1.5.2.
* gnu/packages/xdisorg.scm (rofi): Update to 1.5.2.
2019-01-13 01:25:16 +01:00
Marius Bakke 2bb187c484
gnu: xscreensaver: Update to 5.42.
* gnu/packages/xdisorg.scm (xscreensaver): Update to 5.42.
[arguments]: Add "CFLAGS=-std=c99" to #:make-flags.
2019-01-13 01:25:16 +01:00
Marius Bakke 0c4cee13b2
gnu: libcmis: Update to 0.5.2.
* gnu/packages/libreoffice.scm (libcmis): Update to 0.5.2.
[source](uri): Use XZ-compressed tarball.
[arguments]: Remove #:phases.  Don't pass "--disable-werror" in #:configure-flags.
2019-01-13 01:25:15 +01:00
Marius Bakke 48a51af9d2
gnu: http-parser: Update to 2.9.0.
* gnu/packages/web.scm (http-parser): Update to 2.9.0.
2019-01-13 01:25:15 +01:00
Marius Bakke 304db09257
gnu: http-parser: Download from git.
* gnu/packages/web.scm (http-parser)[source]: Change to GIT-FETCH.
2019-01-13 01:25:15 +01:00
Marius Bakke 9c2094785d
gnu: libetonyek: Adjust inputs.
* gnu/packages/libreoffice.scm (libetonyek)[native-inputs]: Remove LIBLANGTAG.
Move GLM and MDDS to ...
[inputs]: ... here.
[propagated-inputs]: Add LIBLANGTAG and ZLIB.
2019-01-13 01:25:15 +01:00
Marius Bakke 7c3acfcb69
gnu: libetonyek: Update to 0.1.9.
* gnu/packages/libreoffice.scm (libetonyek): Update to 0.1.9.
[arguments]: Remove #:phases.
2019-01-13 01:25:15 +01:00
Marius Bakke b1d2e0b4e0
gnu: libcdr: Update to 0.1.5.
* gnu/packages/libreoffice.scm (libcdr): Update to 0.1.5.
[source](uri): Download over HTTPS.
[arguments]: Remove.
2019-01-13 01:25:15 +01:00
Kei Kebreau 5b9c2690af
gnu: tintin++: Update to 2.01.5.
* gnu/packages/games.scm (tintin++): Update to 2.01.5.
2019-01-12 18:37:38 -05:00
Ricardo Wurmus c6e9b494e8
gnu: r-ruvseq: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.16.1.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus c86fc96987
gnu: r-inspect: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.12.1.
[propagated-inputs]: Add r-deseq2, r-plgem, r-shiny, r-summarizedexperiment,
and r-txdb-mmusculus-ucsc-mm9-knowngene.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus d220babf34
gnu: Add r-txdb-mmusculus-ucsc-mm9-knowngene.
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm9-knowngene): New
variable.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus cad6fb2dec
gnu: Add r-plgem.
* gnu/packages/bioconductor.scm (r-plgem): New variable.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus 45dcd7dcfd
gnu: r-rots: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-rots): Update to 1.10.1.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus 0b469ee225
gnu: r-glimma: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-glimma): Update to 1.10.1.
2019-01-12 23:35:19 +01:00
Ricardo Wurmus 7f2b1c4af0
gnu: r-goseq: Update to 1.34.1.
* gnu/packages/bioconductor.scm (r-goseq): Update to 1.34.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus add2b19561
gnu: r-chippeakanno: Update to 3.16.1.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.16.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus c476edc2cd
gnu: r-rtracklayer: Update to 1.42.1.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.42.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus 1e107b0960
gnu: r-scater: Update to 1.10.1.
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.10.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus 0f268bb275
gnu: r-singlecellexperiment: Update to 1.4.1.
* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Update to 1.4.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus a0224bd4f6
gnu: r-rhdf5lib: Update to 1.4.2.
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.4.2.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus 40561d0249
gnu: r-hdf5array: Update to 1.10.1.
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.10.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus ad10b3979d
gnu: r-qvalue: Update to 2.14.1.
* gnu/packages/bioinformatics.scm (r-qvalue): Update to 2.14.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus 19cacb5a2d
gnu: r-gviz: Update to 1.26.4.
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.26.4.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus c80595935d
gnu: r-biovizbase: Update to 1.30.1.
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.30.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus 27194effd7
gnu: r-ensembldb: Update to 2.6.3.
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.3.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus 43931ff72f
gnu: r-dirichletmultinomial: Update to 1.24.1.
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.24.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus 15d89fe9f8
gnu: r-gage: Update to 2.32.1.
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.32.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus 4615cf9f1a
gnu: r-annotationhub: Update to 2.14.2.
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.14.2.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus ab4a862ab8
gnu: r-edaseq: Update to 2.16.3.
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.16.3.
[propagated-inputs]: Add r-biocmanager.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus 3bdc41b352
gnu: r-deseq: Update to 1.34.1.
* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.34.1.
2019-01-12 23:35:18 +01:00
Ricardo Wurmus 9abf344f8b
gnu: r-msnid: Update to 1.16.1.
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.16.1.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus 880ed11e9f
gnu: r-msnbase: Update to 2.8.3.
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.8.3.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus 6451af78e1
gnu: r-mzid: Update to 1.20.1.
* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.20.1.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus a4f038dc97
gnu: r-mzr: Update to 2.16.1.
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.16.1.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus 46508c3a92
gnu: r-sva: Update to 3.30.1.
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.30.1.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus c20426ec5c
gnu: r-methylkit: Update to 1.8.1.
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.8.1.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus 5c72ebafeb
gnu: r-copywriter: Update to 2.14.1.
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.14.1.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus 86162c767e
gnu: r-rhdf5: Update to 2.26.2.
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.26.2.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus 4c7b9222dd
gnu: r-tximport: Update to 1.10.1.
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.10.1.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus 4bfde52178
gnu: r-genomicalignments: Update to 1.18.1.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.18.1.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus 1fa12b2f06
gnu: r-biostrings: Update to 2.50.2.
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.50.2.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus d4fc834cf7
gnu: r-biocparallel: Update to 1.16.5.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.16.5.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus 52c977a05b
gnu: r-limma: Update to 3.38.3.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.38.3.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus 3fd48846eb
gnu: r-variantannotation: Update to 1.28.8.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.8.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus a619850930
gnu: r-edger: Update to 3.24.3.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.24.3.
2019-01-12 23:35:17 +01:00
Ricardo Wurmus 00f105fe20
gnu: r-biocviews: Update to 1.50.10.
* gnu/packages/bioinformatics.scm (r-biocviews): Update to 1.50.10.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus 9c1b2b2ae0
gnu: r-systempiper: Update to 1.16.1.
* gnu/packages/bioinformatics.scm (r-systempiper): Update to 1.16.1.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus 3b8c884285
gnu: r-rbgl: Update to 1.58.1.
* gnu/packages/bioinformatics.scm (r-rbgl): Update to 1.58.1.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus ffe16ef33c
gnu: r-dexseq: Update to 1.28.1.
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.28.1.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus f7e95c50b8
gnu: r-deseq2: Update to 1.22.2.
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.22.2.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus feb561f721
gnu: r-scran: Update to 1.10.2.
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.10.2.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus fd7301676e
gnu: r-sjplot: Update to 2.6.2.
* gnu/packages/cran.scm (r-sjplot): Update to 2.6.2.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus e45f4a4dab
gnu: r-sjmisc: Update to 2.7.7.
* gnu/packages/cran.scm (r-sjmisc): Update to 2.7.7.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus 5e8282a4a0
gnu: r-rmpi: Update to 0.6-9.
* gnu/packages/cran.scm (r-rmpi): Update to 0.6-9.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus 80c4e75b87
gnu: r-seqminer: Update to 7.1.
* gnu/packages/bioinformatics.scm (r-seqminer): Update to 7.1.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus 3bc0667f3c
gnu: r-bookdown: Update to 0.9.
* gnu/packages/bioinformatics.scm (r-bookdown): Update to 0.9.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus c3e5b456be
gnu: r-protviz: Update to 0.4.0.
* gnu/packages/cran.scm (r-protviz): Update to 0.4.0.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus 209e504bb1
gnu: r-ontologyindex: Update to 2.5.
* gnu/packages/cran.scm (r-ontologyindex): Update to 2.5.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus e041740289
gnu: r-chemometricswithr: Update to 0.1.13.
* gnu/packages/cran.scm (r-chemometricswithr): Update to 0.1.13.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus 9ad5f4ba19
gnu: r-grimport: Update to 0.9-1.1.
* gnu/packages/cran.scm (r-grimport): Update to 0.9-1.1.
2019-01-12 23:35:16 +01:00
Ricardo Wurmus 16d296bbd1
gnu: r-shades: Update to 1.3.1.
* gnu/packages/cran.scm (r-shades): Update to 1.3.1.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus 6eab52e0dd
gnu: r-ggeffects: Update to 0.8.0.
* gnu/packages/cran.scm (r-ggeffects): Update to 0.8.0.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus de7631b278
gnu: r-slam: Update to 0.1-44.
* gnu/packages/cran.scm (r-slam): Update to 0.1-44.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus 2652e2534f
gnu: r-refgenome: Update to 1.7.3.1.
* gnu/packages/cran.scm (r-refgenome): Update to 1.7.3.1.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus f0867a0e8b
gnu: r-findpython: Update to 1.0.4.
* gnu/packages/cran.scm (r-findpython): Update to 1.0.4.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus 12502bf4e8
gnu: r-prediction: Update to 0.3.6.1.
* gnu/packages/cran.scm (r-prediction): Update to 0.3.6.1.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus fbd263cd4a
gnu: r-abn: Update to 1.3.
* gnu/packages/cran.scm (r-abn): Update to 1.3.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus 1b1444012b
gnu: r-sjstats: Update to 0.17.3.
* gnu/packages/cran.scm (r-sjstats): Update to 0.17.3.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus 9df469a1d4
gnu: r-emmeans: Update to 1.3.1.
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.1.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus 1afe56444e
gnu: r-glmmtmb: Update to 0.2.3.
* gnu/packages/cran.scm (r-glmmtmb): Update to 0.2.3.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus 1417d5f1d5
gnu: r-rio: Update to 0.5.16.
* gnu/packages/cran.scm (r-rio): Update to 0.5.16.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus 962304c31c
gnu: r-arules: Update to 1.6-2.
* gnu/packages/cran.scm (r-arules): Update to 1.6-2.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus f2fc34f241
gnu: r-fnn: Update to 1.1.2.2.
* gnu/packages/cran.scm (r-fnn): Update to 1.1.2.2.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus f0fe1a5a45
gnu: r-shinyace: Update to 0.3.3.
* gnu/packages/cran.scm (r-shinyace): Update to 0.3.3.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus 5f1f11049f
gnu: r-cubature: Update to 2.0.3.
* gnu/packages/cran.scm (r-cubature): Update to 2.0.3.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus 7abb15f2bb
gnu: r-tseries: Update to 0.10-46.
* gnu/packages/cran.scm (r-tseries): Update to 0.10-46.
2019-01-12 23:35:15 +01:00
Ricardo Wurmus 9d83132757
gnu: r-statnet-common: Update to 4.2.0.
* gnu/packages/cran.scm (r-statnet-common): Update to 4.2.0.
2019-01-12 23:35:14 +01:00
Ricardo Wurmus 7e9e9c9c46
gnu: r-tinytex: Update to 0.10.
* gnu/packages/cran.scm (r-tinytex): Update to 0.10.
2019-01-12 23:35:14 +01:00
Ricardo Wurmus fc00a1f0fc
gnu: r-pillar: Update to 1.3.1.
* gnu/packages/cran.scm (r-pillar): Update to 1.3.1.
2019-01-12 23:35:14 +01:00
Ricardo Wurmus 111516f9d6
gnu: r-gclus: Update to 1.3.2.
* gnu/packages/cran.scm (r-gclus): Update to 1.3.2.
2019-01-12 23:35:14 +01:00
Ricardo Wurmus ed46a05c75
gnu: r-laeken: Update to 0.5.0.
* gnu/packages/cran.scm (r-laeken): Update to 0.5.0.
2019-01-12 23:35:14 +01:00
Ricardo Wurmus fc74de42da
gnu: r-ddalpha: Update to 1.3.8.
* gnu/packages/cran.scm (r-ddalpha): Update to 1.3.8.
2019-01-12 23:35:14 +01:00
Ricardo Wurmus 221b3b164d
gnu: r-rmysql: Update to 0.10.16.
* gnu/packages/cran.scm (r-rmysql): Update to 0.10.16.
2019-01-12 23:35:14 +01:00
Ricardo Wurmus 1c6d199ee8
gnu: r-mitml: Update to 0.3-7.
* gnu/packages/cran.scm (r-mitml): Update to 0.3-7.
2019-01-12 23:35:14 +01:00
Ricardo Wurmus 5703991841
gnu: r-recipes: Add missing input.
* gnu/packages/cran.scm (r-recipes)[propagated-inputs]: Add r-withr.
2019-01-12 23:35:14 +01:00
Ricardo Wurmus 77f97229c9
gnu: r-dimred: Add missing input.
* gnu/packages/cran.scm (r-dimred)[propagated-inputs]: Add r-magrittr.
2019-01-12 23:35:14 +01:00
Ricardo Wurmus 8f88701491
gnu: r-lava: Update to 1.6.4.
* gnu/packages/cran.scm (r-lava): Update to 1.6.4.
2019-01-12 23:35:14 +01:00