ff1989a599
gnu: qt-4: Use a more standard directory layout.
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* gnu/packages/qt.scm (qt-4)[arguments]: Pass -datadir, -importdir,
-plugindir, and -translationdir.
2015-07-03 15:28:07 +02:00
cba632c4a8
gnu: qt-4: Use 'modify-phases'.
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* gnu/packages/qt.scm (qt-4)[arguments]: Use 'modify-phases' instead of
'alist-replace'.
2015-07-03 15:28:07 +02:00
ef2f51a445
gnu: cups-filter: Install backends and filters under lib/cups.
...
This ensures that they are stripped during the 'strip' phase, thereby removing
references to GCC and linux-libre-headers that would otherwise be found in
debugging symbols.
* gnu/packages/cups.scm (cups-filters)[source]: Change pkgbackenddir and
pkgfilterdir to $(PREFIX)/lib/cups/{filter,backend}.
(cups)[arguments]: Adjust accordingly.
2015-07-03 15:28:07 +02:00
6a52df505a
gnu: mysql: Remove unnecessary binaries.
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This saves ~42 MiB on x86_64.
* gnu/packages/databases.scm (mysql)[arguments]: Add 'remove-extra-binaries'
phase.
2015-07-03 15:28:06 +02:00
3f289db69d
gnu: mysql: Strip references and GCC and other build-time dependencies.
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* gnu/packages/databases.scm (mysql)[arguments]: Add 'strip-extra-references'
phase.
2015-07-03 15:28:06 +02:00
b5b08878b6
gnu: mutt: Don't retain reference to GCC.
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* gnu/packages/patches/mutt-store-references.patch: New file.
* gnu/packages/mail.scm (mutt)[source]: Use it.
* gnu-system.am (dist_patch_DATA): Add it.
2015-07-03 15:28:06 +02:00
9161ba818d
gnu: ghostscript: Add "doc" output.
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* gnu/packages/ghostscript.scm (ghostscript)[source](snippet): New field.
[outputs]: New field.
[arguments]: Add 'remove-doc-reference' phase.
2015-07-03 15:28:06 +02:00
08fa45b190
gnu: gnupg: Enable TLS support.
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* gnu/packages/gnupg.scm (gnupg)[native-inputs]: Add pkg-config.
[inputs]: Add gnutls.
(gnupg-2.0, gnupg-1)[native-inputs]: Override inherited value to be '().
2015-07-02 12:35:12 -04:00
5e5fa28e76
gnu: gnupg: Update to 2.1.6.
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* gnu/packages/gnupg.scm (gnupg): Update to 2.1.6.
2015-07-02 12:35:12 -04:00
c61fe02cc0
gnu: Add WarpedLMM.
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* gnu/packages/bioinformatics.scm (python2-warpedlmm): New variable.
2015-07-02 11:16:46 +02:00
f4f4ced8dc
gnu: r: Set default pager.
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* gnu/packages/statistics.scm (r)[arguments]: Add phase "set-default-pager" to
avoid "false" as a default pager.
2015-07-02 10:50:55 +02:00
28de8d258b
environment: Define 'GUIX_ENVIRONMENT'.
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* guix/scripts/environment.scm (create-environment): Define 'GUIX_ENVIRONMENT'.
* doc/guix.texi (Invoking guix environment): Document it.
* gnu/system/shadow.scm (default-skeletons): Adjust 'PS1' depending on whether
'GUIX_ENVIRONMENT' is defined.
2015-07-01 23:29:49 +02:00
d6902798d1
gnu: powertabeditor: Replace "gcc" with "libiberty".
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* gnu/packages/music.scm (powertabeditor)[inputs]: Replace "gcc" with
"libiberty".
2015-07-01 21:52:08 +02:00
d231bb3575
gnu: Add Hydrogen.
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* gnu/packages/music.scm (hydrogen): New variable.
2015-07-01 21:52:08 +02:00
5135aed92b
gnu: linux-libre: Update to 4.1.1.
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* gnu/packages/linux.scm (linux-libre): Update to 4.1.1.
2015-07-01 00:12:39 -04:00
58c1806908
gnu: git: Add inputs for send-email.
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* gnu/packages/version-control.scm (package-transitive-propagated-labels*)
(package-propagated-input-refs): New procedures.
(git)[inputs]: Add perl-authen-sasl, perl-net-smtp-ssl, and perl-io-socket-ssl.
[outputs]: Add send-email output.
[arguments]: Add #:modules argument with srfi-1. In 'split phase, wrap
git-send-email.
2015-06-30 05:01:42 -05:00
c6ee18abb6
gnu: Add perl-authen-sasl.
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* gnu/packages/web.scm (perl-authen-sasl): New variable.
2015-06-30 05:01:42 -05:00
9fe938c19f
gnu: Add perl-gssapi.
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* gnu/packages/web.scm (perl-gssapi): New variable.
2015-06-30 05:01:42 -05:00
b1096f3dbb
gnu: Add perl-net-smtp-ssl.
...
* gnu/packages/web.scm (perl-net-smtp-ssl): New variable.
2015-06-30 05:01:42 -05:00
d2e3caba5d
gnu: curl: Disable test that fails on Hydra.
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* gnu/packages/curl.scm (arguments): Disable test 1510.
2015-06-30 00:17:00 -04:00
4617c2e383
gnu: curl: Update to 7.43.0.
...
* gnu/packages/curl.scm (curl): Update to 7.43.0.
2015-06-30 00:17:00 -04:00
a17d45641b
gnu: Add deal.II.
...
* gnu/packages/maths.scm (dealii, dealii-openmpi): New variables.
* gnu/packages/patches/dealii-p4est-interface.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-29 15:34:36 -05:00
a7f0141452
gnu: Add SLEPc.
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* gnu/packages/maths.scm (slepc, slepc-complex, slepc-openmpi)
(slepc-complex-openmpi): New variables.
2015-06-29 15:34:36 -05:00
8c94c886f6
gnu: Add arpack-ng-openmpi.
...
* gnu/packages/maths.scm (arpack-ng-openmpi): New variable.
2015-06-29 15:34:36 -05:00
9a899cceab
gnu: petsc: Upgrade to 3.6.0.
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* gnu/packages/maths.scm (petsc): Upgrade to 3.6.0.
* gnu/packages/patches/petsc-fix-threadcomm.patch: Delete patch.
* gnu-system.am (dist_patch_DATA): Remove it.
2015-06-29 15:34:36 -05:00
cec86422b7
gnu: Add MUMPS.
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* gnu/packages/maths.scm (mumps, mumps-metis, mumps-openmpi)
(mumps-metis-openmpi): New variables.
* gnu/packages/patches/mumps-build-parallelism.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-29 15:34:36 -05:00
aa75ad0097
gnu: Add METIS.
...
* gnu/packages/maths.scm (metis): New variable.
2015-06-29 15:34:36 -05:00
700ff22219
gnu: Add p4est.
...
* gnu/packages/maths.scm (p4est, p4est-openmpi): New variables.
2015-06-29 15:34:36 -05:00
e1ff597a64
gnu: Add ScaLAPACK.
...
* gnu/packages/maths.scm (scalapack): New variable.
2015-06-29 15:34:36 -05:00
cf0ec6c46e
gnu: scotch, pt-scotch: Build esmumps libraries.
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* gnu/packages/maths.scm (scotch)[arguments]: Add 'build-esmumps
phase. Install esmumps libraries and headers in 'install phase.
(pt-scotch)[arguments]: Build ptesmumps in 'build phase. Add
make parallelism.
2015-06-29 15:34:36 -05:00
d6602ee9d4
gnu: scotch, pt-scotch: Use modify-phases.
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* gnu/packages/maths.scm (scotch, pt-scotch)[arguments]: Use modify-phases.
2015-06-29 15:34:36 -05:00
6c7985408f
gnu: Update scotch to 6.0.4.
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* gnu/packages/maths.scm (scotch): Update to 6.0.4.
[arguments]: Add -fPIC to CFLAGS.
* gnu/packages/patches/scotch-test-threading.patch: Adjust patch for a
new set of test fixes.
* gnu/packages/patches/pt-scotch-build-parallelism.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-29 15:34:36 -05:00
38f0a2bade
gnu: openmpi: Upgrade to 1.8.5.
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* gnu/packages/mpi.scm (openmpi): Upgrade to 1.8.5.
[native-inputs]: Add perl.
[arguments]: Add configure flags for thread support.
2015-06-29 15:34:36 -05:00
579f5c8a58
gnu: hwloc: Move numactl to inputs.
...
* gnu/packages/mpi.scm (hwloc)[propagated-inputs]: Move numactl from here...
[inputs]: ...to here.
[arguments]: New 'refine-libnuma' phase.
2015-06-29 15:34:36 -05:00
ce7d9c989d
gnu: hwloc: Upgrade to 1.10.1.
...
* gnu/packages/patches/hwloc-gather-topology-lstopo.patch: New patch.
* gnu/packages/mpi.scm (hwloc): Upgrade to 1.10.1.
[source]: Use patch.
[propagated-inputs]: Remove libpci.
[inputs]: Add libpciaccess.
* gnu-system.am (dist_patch_DATA): Add patch.
2015-06-29 15:34:36 -05:00
7362371da5
gnu: python-mccabe: Fix license field.
...
* gnu/packages/python.scm (python-mccabe)[license]: 'expat' ->
'license:expat'.
2015-06-29 15:34:35 -05:00
e8df8f476e
gnu: Add python-flake8.
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* gnu/packages/python.scm (python-flake8, python2-flake8): New variables.
2015-06-30 00:07:56 +02:00
a59e017cb1
gnu: Add python-mccabe.
...
* gnu/packages/python.scm (python-mccabe, python2-mccabe): New variables.
2015-06-30 00:07:56 +02:00
e31d7f4420
gnu: Add python-pyflakes.
...
* gnu/packages/python.scm (python-pyflakes, python2-pyflakes): New variables.
2015-06-30 00:07:55 +02:00
d889e6c4d9
gnu: Add python-pep8.
...
* gnu/packages/python.scm (python-pep8, python2-pep8): New variables.
2015-06-30 00:07:55 +02:00
2573410865
gnu: withershins: Use new "libiberty" package.
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* gnu/packages/code.scm (withershins)[inputs]: Replace "gcc" with "libiberty".
[arguments]: Simplify "find-libiberty" phase.
2015-06-29 21:01:13 +02:00
2b6b6d13e7
gnu: Add libiberty.
...
* gnu/packages/gcc.scm (make-libiberty, libiberty): New variables.
2015-06-29 21:01:13 +02:00
74e03fccd3
gnu: r: Update to 3.2.1.
...
* gnu/packages/statistics.scm (r): Update to 3.2.1.
* gnu/packages/patches/r-fix-15899.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
2015-06-29 16:13:28 +02:00
82c370dea1
gnu: Add Blast+.
...
* gnu/packages/bioinformatics.scm (blast+): New variable.
2015-06-29 16:13:28 +02:00
11906b2c38
gnu: global: Update to 6.5.
...
* gnu/packages/code.scm (global): Update to 6.5.
2015-06-29 14:42:10 +02:00
622a616e33
gnu: help2man: Update to 1.47.1.
...
* gnu/packages/man.scm (help2man): Update to 1.47.1.
2015-06-29 14:42:10 +02:00
b1f5fe0eb7
gnu: parallel: Update to 20150622.
...
* gnu/packages/parallel.scm (parallel): Update to 20150622.
2015-06-29 14:42:10 +02:00
dd138fc856
gnu: screen: Update to 4.3.1.
...
* gnu/packages/screen.scm (screen): Update to 4.3.1.
2015-06-29 14:42:10 +02:00
ce1e4bd58d
gnu: texinfo: Add version 6.0.
...
* gnu/packages/texinfo.scm (texinfo-6): New variable.
2015-06-29 14:42:10 +02:00
ab5f49cf6a
gnu: gcc-4.8: Update to 4.8.5.
...
* gnu/packages/gcc.scm (gcc-4.8): Update to 4.8.5.
2015-06-29 14:42:10 +02:00
Ludovic Courtès