Commit Graph

30664 Commits

Author SHA1 Message Date
Ricardo Wurmus 50e33c3a8c
gnu: python-screed: Update to 1.0.
* gnu/packages/bioinformatics.scm (python-screed): Update to 1.0.
[arguments]: Run tests after installation.
[native-inputs]: Add python-pytest, python-pytest-cov, and
python-pytest-runner; remove python-nose.
2018-10-21 23:06:47 +02:00
Ricardo Wurmus 0db75f7a79
gnu: fasttree: Use INVOKE.
* gnu/packages/bioinformatics.scm (fasttree)[arguments]: Use INVOKE; simplify
install phase.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 38622ccd14
gnu: express-beta-diversity: Update to 1.0.8.
* gnu/packages/bioinformatics.scm (express-beta-diversity): Update to 1.0.8.
[source]: Fetch from git.
[arguments]: Use INVOKE; remove "exit-source" build phase; simplify.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus c96ca68f31
gnu: edirect: Update to 10.2.20181018.
* gnu/packages/bioinformatics.scm (edirect): Update to 10.2.20181018.
[arguments]: Add simple check phase; simplify other phases.
[inputs]: Add perl-xml-simple.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 949fa34b84
gnu: eigensoft: Update to 7.2.1.
* gnu/packages/bioinformatics.scm (eigensoft): Update to 7.2.1.
[arguments]: Remove Makefile modification.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 5748fe5fcc
gnu: discrover: Fetch from git.
* gnu/packages/bioinformatics.scm (discrover)[source]: Fetch from git.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 4348a059e5
gnu: Add texlive-latex-examplep.
* gnu/packages/tex.scm (texlive-latex-examplep): New variable.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus f50f343e0d
gnu: Add texlive-latex-verbatimbox.
* gnu/packages/tex.scm (texlive-latex-verbatimbox): New variable.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 1d0669f4b4
gnu: Add texlive-latex-readarray.
* gnu/packages/tex.scm (texlive-latex-readarray): New variable.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 893fbf1285
gnu: Add texlive-generic-listofitems.
* gnu/packages/tex.scm (texlive-generic-listofitems): New variable.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 49b2e86adf
gnu: Add texlive-latex-doi.
* gnu/packages/tex.scm (texlive-latex-doi): New variable.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 1c06399358
gnu: diamond: Fetch from git.
* gnu/packages/bioinformatics.scm (diamond)[source]: Fetch from git.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 7a1e62ca67
gnu: delly: Update to 0.7.9.
* gnu/packages/bioinformatics.scm (delly): Update to 0.7.9.
[source]: Fetch from git.
[arguments]: Add phase install-templates; use default install phase.
[native-inputs]: Remove python-2.
[home-page]: Use new home page.
* gnu/packages/patches/delly-use-system-libraries.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 4d494a4fa3
gnu: deeptools: Update to 3.1.3.
* gnu/packages/bioinformatics.scm (deeptools): Update to 3.1.3.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus e6b65bd219
gnu: eolie: Update to 0.9.45.
* gnu/packages/gnome.scm (eolie): Update to 0.9.45.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 42643fc24d
gnu: python-dendropy: Fetch from git.
* gnu/packages/bioinformatics.scm (python-dendropy)[source]: Fetch from git.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 6b31040ae6
gnu: python-py2bit: Update to 0.3.0.
* gnu/packages/bioinformatics.scm (python-py2bit): Update to 0.3.0.
2018-10-21 23:06:45 +02:00
Ricardo Wurmus 6b7260bad1
gnu: cutadapt: Update to 1.18.
* gnu/packages/bioinformatics.scm (cutadapt): Update to 1.18.
[inputs]: Add python-dnaio.
2018-10-21 23:06:45 +02:00
Ricardo Wurmus a5b0038cbd
gnu: Add python-dnaio.
* gnu/packages/bioinformatics.scm (python-dnaio): New variable.
2018-10-21 23:06:45 +02:00
Ricardo Wurmus 7321920cd3
gnu: crossmap: Update to 0.2.9.
* gnu/packages/bioinformatics.scm (crossmap): Update to 0.2.9.
* gnu/packages/patches/crossmap-allow-system-pysam.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
2018-10-21 23:06:45 +02:00
Ricardo Wurmus 8640f9ec91
gnu: python-twobitreader: Update to 3.1.6.
* gnu/packages/bioinformatics.scm (python-twobitreader): Update to 3.1.6.
[source]: Fetch from git.
2018-10-21 23:06:45 +02:00
Ricardo Wurmus f5cec0068a
gnu: Add python-bx-python.
* gnu/packages/bioinformatics.scm (python-bx-python): New variable.
(python2-bx-python): Define in terms of python-bx-python.
2018-10-21 23:06:45 +02:00
Ricardo Wurmus 2ba2d62c69
gnu: python2-bx-python: Update to 0.8.2.
* gnu/packages/bioinformatics.scm (python2-bx-python): Update to 0.8.2.
[source]: Remove obsolete snippet.
[inputs]: Move python2-numpy from here...
[propagated-inputs]: ...to here; add python2-six.
[native-inputs]: Add python2-lzo and python2-cython.
[home-page]: Update to new home at Github.
2018-10-21 23:06:45 +02:00
Ricardo Wurmus 1d18ee6dfd
gnu: bwa-pssm: Fetch from git.
* gnu/packages/bioinformatics.scm (bwa-pssm)[source]: Fetch from git.
2018-10-21 23:06:45 +02:00
Ricardo Wurmus 9a6808e0c0
gnu: tophat: Update to 2.1.1.
* gnu/packages/bioinformatics.scm (tophat): Update to 2.1.1.
* gnu/packages/patches/tophat-build-with-later-seqan.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
2018-10-21 23:06:45 +02:00
Mark H Weaver f7618bf18e
gnu: linux-libre: Update to 4.18.16.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.16.
(%linux-libre-hash): Update hash.
2018-10-21 14:59:30 -04:00
Mark H Weaver 668834cae0
gnu: linux-libre@4.14: Update to 4.14.78.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.78.
(%linux-libre-4.14-hash): Update hash.
2018-10-21 14:58:03 -04:00
Mark H Weaver c4a7a51292
gnu: linux-libre@4.9: Update to 4.9.135.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.135.
2018-10-21 14:57:24 -04:00
Mark H Weaver 9ab6c680ba
gnu: linux-libre@4.4: Update to 4.4.162.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.162.
2018-10-21 14:56:44 -04:00
Pierre Neidhardt 673364cd3a
gnu: Add emacs-slime-repl-ansi-color.
* gnu/packages/emacs.scm (emacs-slime-repl-ansi-color): New variable.
2018-10-21 19:49:10 +02:00
Marius Bakke 3a69b59332
gnu: rng-tools: Update to 6.6.
* gnu/packages/linux.scm (rng-tools): Update to 6.6.
2018-10-21 17:57:01 +02:00
Marius Bakke 9b6dc31b6d
gnu: fluidsynth: Update to 2.0.1.
* gnu/packages/audio.scm (fluidsynth): Update to 2.0.1.
(fluidsynth-1): New public variable.
* gnu/packages/games.scm (gzdoom)[inputs]: Change FLUIDSYNTH to FLUIDSYNTH-1.
* gnu/packages/music.scm (lmms)[inputs]: Likewise.
2018-10-21 17:57:01 +02:00
Marius Bakke b6b3e5120a
gnu: libgxps: Update to 0.3.0.
* gnu/packages/gnome.scm (libgxps): Update to 0.3.0.
[source](patches): Remove.
[build-system]: Switch to MESON-BUILD-SYSTEM.
[inputs]: Change LIBJPEG to LIBJPEG-TURBO.
* gnu/packages/patches/libgxps-CVE-2017-11590.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2018-10-21 17:57:01 +02:00
Marius Bakke c8d62d936e
gnu: libgxps: Propagate required inputs.
* gnu/packages/gnome.scm (libgxps)[inputs]: Move CAIRO, GLIB and LIBARCHIVE ...
[propagated-inputs]: ... here.  New field.
2018-10-21 17:57:01 +02:00
Marius Bakke 920de4286a
gnu: re2: Update to 2018-10-01.
* gnu/packages/regex.scm (re2): Update to 2018-10-01.
2018-10-21 17:57:01 +02:00
Marius Bakke ab5e4be647
gnu: libgphoto2: Update to 2.5.19.
* gnu/packages/photo.scm (libgphoto2): Update to 2.5.19.
2018-10-21 17:57:01 +02:00
Marius Bakke 8941b4ab3d
gnu: appstream-glib: Update to 0.7.14.
* gnu/packages/glib.scm (appstream-glib): Update to 0.7.14.
2018-10-21 17:57:00 +02:00
Marius Bakke 8eadc55202
gnu: openal: Update to 1.19.1.
* gnu/packages/audio.scm (openal): Update to 1.19.1.
2018-10-21 17:57:00 +02:00
Efraim Flashner 2c17bd7b29
gnu: kodi: Disable version checker.
Fixes bug#32997.

* gnu/packages/kodi.scm (kodi)[arguments]: Add substitution to remove
the version checking configuration option.
2018-10-21 16:39:26 +03:00
Ben Woodcroft 617c478506
gnu: python2-dendropy: Disable failing test.
* gnu/packages/bioinformatics.scm (python2-dendropy)[arguments]: Disable
failing test.
2018-10-21 22:31:56 +10:00
Ricardo Wurmus 21c837405a
gnu: bowtie: Update to 2.3.4.3.
* gnu/packages/bioinformatics.scm (bowtie): Update to 2.3.4.3.
[source]: Fetch from git.
[inputs]: Replace python-2 with python-wrapper; move perl, perl-clone,
perl-test-deep, and perl-test-simple from here...
[native-inputs]: ...to here.
[arguments]: Simplify check phase.
2018-10-20 23:37:34 +02:00
Ricardo Wurmus f45093429c
gnu: blast+: Use INVOKE and return #T unconditionally.
* gnu/packages/bioinformatics.scm (blast+)[arguments]: Use INVOKE and
return #T unconditionally.
2018-10-20 23:37:34 +02:00
Ricardo Wurmus f8b697a385
gnu: bedops: Update to 2.4.35.
* gnu/packages/bioinformatics.scm (bedops): Update to 2.4.35.
[source]: Fetch from git.
2018-10-20 23:37:34 +02:00
Ricardo Wurmus 337d72fb44
gnu: bedops: Use INVOKE.
* gnu/packages/bioinformatics.scm (bedops)[arguments]: Use INVOKE.
2018-10-20 23:37:34 +02:00
Ricardo Wurmus c793f4d8fb
gnu: bamm: Fetch from git and use INVOKE.
* gnu/packages/bioinformatics.scm (bamm)[source]: Fetch from git.
[arguments]: Use INVOKE and return #T unconditionally.
2018-10-20 23:37:34 +02:00
Ricardo Wurmus 95758e2faf
gnu: aragorn: Use invoke and simplify.
* gnu/packages/bioinformatics.scm (aragorn)[arguments]: Use INVOKE in build
phase; simplify install phase.
2018-10-20 23:37:33 +02:00
Ricardo Wurmus 8b4102b903
gnu: clipper: Update to 1.2.1.
* gnu/packages/bioinformatics.scm (clipper): Update to 1.2.1.
[source]: Fetch from git.
[arguments]: Add fix-typo phase.
2018-10-20 23:37:33 +02:00
Ricardo Wurmus 895cf8278a
gnu: python-pybedtools: Update to 0.7.10.
* gnu/packages/bioinformatics.scm (python2-pybedtools): Update to 0.7.10.
[arguments]: Disable broken tests.
[propagated-inputs]: Replace bedtools with bedtools-2.26; add
python-matplotlib, python-pysam, and python-pyyaml.
[native-inputs]: Remove python-pyyaml; add kentutils, python-numpy,
python-pandas, and python-six.
(python-pybedtools): New variable.
2018-10-20 23:37:33 +02:00
Ricardo Wurmus 129363b762
gnu: Add bedtools-2.26.
* gnu/packages/bioinformatics.scm (bedtools-2.26): New variable.
2018-10-20 23:37:28 +02:00
Kei Kebreau bfa47f14b1
gnu: cataclysm-dda: Update snapshot.
* gnu/packages/games.scm (cataclysm-dda): Update snapshot to 0b2c194e5.
2018-10-20 14:38:45 -04:00
Kei Kebreau 82cbe4e046
gnu: maxima: Update to 5.42.0.
* gnu/packages/maths.scm (maxima): Update to 5.42.0.
2018-10-20 14:38:45 -04:00
Oleg Pykhalov 227da3a4c5
gnu: python-glances: Update to 3.0.2.
* gnu/packages/python.scm (python-glances): Update to 3.0.2.
2018-10-20 18:24:23 +03:00
Oleg Pykhalov 67fd64a490
gnu: emacs-hy-mode: Update to 1.0.3.
* gnu/packages/emacs.scm (emacs-hy-mode): Update to 1.0.3.
2018-10-20 17:48:58 +03:00
Oleg Pykhalov e661dca879
gnu: emacs-erc-hl-nicks: Update to 1.3.3.
* gnu/packages/emacs.scm (emacs-erc-hl-nicks): Update to 1.3.3.
2018-10-20 17:48:49 +03:00
Oleg Pykhalov 91c5e6a69d
gnu: emacs-yasnippet: Update to 0.13.0.
* gnu/packages/emacs.scm (emacs-yasnippet): Update to 0.13.0.
2018-10-20 17:48:36 +03:00
Oleg Pykhalov 292d637b9e
gnu: emacs-nginx-mode: Update to 1.1.9.
* gnu/packages/emacs.scm (emacs-nginx-mode): Update to 1.1.9.
2018-10-20 17:48:28 +03:00
Oleg Pykhalov 2f1dacc281
gnu: emacs-rainbow-mode: Update to 1.0.1.
* gnu/packages/emacs.scm (emacs-rainbow-mode): Update to 1.0.1.
2018-10-20 17:48:07 +03:00
Oleg Pykhalov 45dcdf5349
gnu: emacs-smart-mode-line: Update to 2.12.0.
* gnu/packages/emacs.scm (emacs-smart-mode-line): Update to 2.12.0.
2018-10-20 17:47:46 +03:00
Oleg Pykhalov 9137596179
gnu: emacs-fill-column-indicator: Update to 1.89.
* gnu/packages/emacs.scm (emacs-fill-column-indicator): Update to 1.89.
2018-10-20 17:47:13 +03:00
Oleg Pykhalov 83246854f3
gnu: emacs-ggtags: Update to 0.8.13.
* gnu/packages/emacs.scm (emacs-ggtags): Update to 0.8.13.
2018-10-20 17:46:43 +03:00
Oleg Pykhalov 42f9ebdc77
gnu: emacs-which-key: Update to 3.3.0.
* gnu/packages/emacs.scm (emacs-which-key): Update to 3.3.0.
2018-10-20 17:37:32 +03:00
Christopher Baines 0d3f170864
gnu: Add soundconverter.
* gnu/packages/gnome.scm (soundconverter): New variable.
* gnu/packages/patches/soundconverter-remove-gconf-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-10-20 12:24:50 +01:00
nixo b5a927b3ba
gnu: Add enchive.
* gnu/packages/crypto.scm (enchive): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-19 23:39:41 +02:00
Ludovic Courtès 64791eb7e1
services: ntp: Document 'ntp-service-type' and 'ntp-configuration'.
* gnu/services/networking.scm (<ntp-configuration>)[servers]: Add
default value.
(ntp-service-type)[default-value]: New field.
(ntp-service): Mark as deprecated.
* gnu/services/desktop.scm (%desktop-services): Use (service
ntp-service-type) instead of calling 'ntp-service'.
* doc/guix.texi (Networking Services): Document 'ntp-service-type' and
'ntp-configuration'.
2018-10-19 23:39:41 +02:00
Meiyo Peng bc83b2e22f
gnu: Add i3blocks.
* gnu/packages/wm.scm (i3blocks): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-19 23:39:37 +02:00
Ricardo Wurmus cdb84eb0e6
gnu: qsynth: Update to 0.5.3.
* gnu/packages/audio.scm (qsynth): Update to 0.5.3.
2018-10-19 21:59:28 +02:00
Ludovic Courtès 0ee6692a63
gnu: sbcl-slime-swank: Remove reference to unbound variable.
Fixes a regression introduced in commit
c4d4ae1e16.

* gnu/packages/lisp.scm (sbcl-slime-swank)[license]: Remove extra 'license'.
2018-10-19 18:34:07 +02:00
Amirouche b1e6b93805
gnu: guile-wiredtiger: Update to 0.7.0.
* gnu/packages/databases.scm (guile-wiredtiger): Update to 0.7.0.
[inputs]: Replace wiredtiger with wiredtiger-3
[propagated-inputs]: Remove guile-lib, add guile-bytestructures
[description]: Update it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-19 18:28:57 +02:00
Amirouche 4680fef705
gnu: Add wiredtiger 3.1.0
* gnu/packages/databases.scm (wiredtiger-3): New variable that inherits from
  wiredtiger

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-19 18:28:57 +02:00
Pierre Neidhardt 3bd45f5c80
gnu: emacs-slime: License is a mix of GPL2+ and public domain.
* gnu/packages/emacs.scm (emacs-slime)[license]: Update to (gpl2+ public-domain)
2018-10-19 18:00:14 +02:00
Pierre Neidhardt e2e5004f6e
gnu: Add lparallel.
* gnu/packages/lisp.scm (cl-lparallel, ecl-lparallel, sbcl-lparallel): New variables.
2018-10-19 17:56:38 +02:00
Pierre Neidhardt 24fd7586a4
gnu: Add sbcl-cl-webkit.
* gnu/packages/lisp.scm (sbcl-cl-webkit): New variable.
2018-10-19 17:56:38 +02:00
Pierre Neidhardt c80dfee9f1
gnu: Add sbcl-cl-cffi-gtk.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk): New variable.
2018-10-19 17:56:38 +02:00
Pierre Neidhardt 7b5b8c4405
gnu: Add sbcl-cl-cffi-gtk-gdk.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-gdk): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt a3bdddc359
gnu: Add sbcl-cl-cffi-gtk-gdk-pixbuf.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-gdk-pixbuf): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt 9ecc457b52
gnu: Add sbcl-cl-cffi-gtk-pango.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-pango): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt 7176fe7c32
gnu: Add sbcl-cl-cffi-gtk-cairo.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-cairo): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt 867b3f4780
gnu: Add sbcl-cl-cffi-gtk-gio.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-gio): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt 77a5461c31
gnu: Add sbcl-cl-cffi-gtk-gobject.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-gobject): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt 64dcf7d99b
gnu: Add sbcl-cl-cffi-gtk-glib.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk-glib): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt c88985d9b0
gnu: Add sbcl-cl-cffi-gtk.
* gnu/packages/lisp.scm (sbcl-cl-cffi-gtk): New variable.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt 85be9191ee
gnu: Add closer-mop.
* gnu/packages/lisp.scm (cl-closer-mop, ecl-closer-mop, sbcl-closer-mop): New variables.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt 4aa2342008
gnu: Add trivial-garbage.
* gnu/packages/lisp.scm (cl-trivial-garbage, ecl-trivial-garbage, sbcl-trivial-garbage): New variables.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt 2cc931db44
gnu: Add cl-unix-opts.
* gnu/packages/lisp.scm (cl-unix-opts, ecl-unix-opts, sbcl-unix-opts): New variables.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt dedbf37e5d
gnu: Add cl-json.
* gnu/packages/lisp.scm (cl-json, ecl-cl-json, sbcl-cl-json): New variables.
2018-10-19 17:56:37 +02:00
Pierre Neidhardt 4624d2e2b4
gnu: Add parenscript.
* gnu/packages/lisp.scm (cl-parenscript, ecl-parenscript, sbcl-parenscript): New variables.
2018-10-19 17:56:36 +02:00
Pierre Neidhardt 8f065b47c7
gnu: Add sbcl-cl-sqlite.
* gnu/packages/lisp.scm (sbcl-cl-sqlite): New variable.
2018-10-19 17:56:36 +02:00
Pierre Neidhardt 4112307268
gnu: Add sbcl-cffi.
* gnu/packages/lisp.scm (sbcl-cffi): New variable.
2018-10-19 17:56:36 +02:00
Pierre Neidhardt d3142f2ffb
gnu: Add sbcl-cffi-grovel.
* gnu/packages/lisp.scm (sbcl-cffi-grovel): New variable.
2018-10-19 17:56:36 +02:00
Pierre Neidhardt 9eea4e0302
gnu: Add sbcl-cffi-libffi.
* gnu/packages/lisp.scm (sbcl-cffi-libffi): New variable.
2018-10-19 17:56:36 +02:00
Pierre Neidhardt 99b3d203fb
gnu: Add sbcl-cffi-toolchain.
* gnu/packages/lisp.scm (sbcl-cffi-toolchain): New variable.
2018-10-19 17:56:35 +02:00
Pierre Neidhardt 5d9bf76235
gnu: Add sbcl-cffi-bootstrap.
* gnu/packages/lisp.scm (sbcl-cffi-bootstrap): New variable.
2018-10-19 17:56:06 +02:00
Pierre Neidhardt 92b1d09b68
gnu: Add queues.priority-cqueue.
* gnu/packages/lisp.scm (cl-queues.priority-cqueue, ecl-queues.priority-cqueue, sbcl-queues.priority-cqueue): New variables.
2018-10-19 17:54:13 +02:00
Pierre Neidhardt 144085cd69
gnu: Add queues.priority-queue.
* gnu/packages/lisp.scm (cl-queues.priority-queue, ecl-queues.priority-queue, sbcl-queues.priority-queue): New variables.
2018-10-19 17:54:13 +02:00
Pierre Neidhardt a889ba99c1
gnu: Add queues.simple-cqueue.
* gnu/packages/lisp.scm (cl-queues.simple-cqueue, ecl-queues.simple-cqueue, sbcl-queues.simple-cqueue): New variables.
2018-10-19 17:54:13 +02:00
Pierre Neidhardt 6fef7c0ec8
gnu: Add queues.simple-queue.
* gnu/packages/lisp.scm (cl-queues.simple-queue, ecl-queues.simple-queue, sbcl-queues.simple-queue): New variables.
2018-10-19 17:54:13 +02:00
Pierre Neidhardt eb766dfed0
gnu: Add queues.
* gnu/packages/lisp.scm (cl-queues, ecl-queues, sbcl-queues): New variables.
2018-10-19 17:54:13 +02:00
Pierre Neidhardt 3f4c21c53e
gnu: Add puri.
* gnu/packages/lisp.scm (cl-puri, ecl-puri, sbcl-puri): New variables.
2018-10-19 17:54:13 +02:00
Pierre Neidhardt 1de50cb73e
gnu: Add ptester.
* gnu/packages/lisp.scm (cl-ptester, ecl-ptester, sbcl-ptester): New variables.
2018-10-19 17:54:13 +02:00
Pierre Neidhardt a28d00d999
gnu: Add simple-scanf.
* gnu/packages/lisp.scm (cl-simple-scanf, ecl-simple-scanf, sbcl-simple-scanf): New variables.
2018-10-19 17:54:13 +02:00
Pierre Neidhardt 28b52970ba
gnu: Add parse-float.
* gnu/packages/lisp.scm (cl-parse-float, ecl-parse-float, sbcl-parse-float): New variables.
2018-10-19 17:54:13 +02:00
Pierre Neidhardt 41b3b866ce
gnu: Add proc-parse.
* gnu/packages/lisp.scm (cl-proc-parse, ecl-proc-parse, sbcl-proc-parse): New variables.
2018-10-19 17:54:12 +02:00
Pierre Neidhardt 86afb0a272
gnu: Add prove.
* gnu/packages/lisp.scm (cl-prove, ecl-prove, sbcl-prove): New variables.
2018-10-19 17:54:12 +02:00
Pierre Neidhardt 1a42bb80cb
gnu: Add prove-asdf.
* gnu/packages/lisp.scm (cl-prove-asdf, ecl-prove-asdf, sbcl-prove-asdf): New variables.
2018-10-19 17:54:12 +02:00
Pierre Neidhardt 68a7b929f3
gnu: Add cl-ansi-text.
* gnu/packages/lisp.scm (cl-ansi-text, ecl-cl-ansi-text, sbcl-cl-ansi-text): New variables.
2018-10-19 17:54:12 +02:00
Pierre Neidhardt 8caa928dd4
gnu: Add cl-colors.
* gnu/packages/lisp.scm (cl-colors, ecl-cl-colors, sbcl-cl-colors): New variables.
2018-10-19 17:54:12 +02:00
Pierre Neidhardt d414223205
gnu: Add let-plus.
* gnu/packages/lisp.scm (cl-let-plus, ecl-let-plus, sbcl-let-plus): New variables.
2018-10-19 17:54:12 +02:00
Pierre Neidhardt 5b8a801d16
gnu: Add lift.
* gnu/packages/lisp.scm (cl-lift, ecl-lift, sbcl-lift): New variables.
2018-10-19 17:54:12 +02:00
Pierre Neidhardt 9f3000cc11
gnu: Add anaphora.
* gnu/packages/lisp.scm (cl-anaphora, ecl-anaphora, sbcl-anaphora): New variables.
2018-10-19 17:54:12 +02:00
Pierre Neidhardt 19a1c3be97
gnu: Add lisp-unit.
* gnu/packages/lisp.scm (cl-lisp-unit, ecl-lisp-unit, sbcl-lisp-unit): New variables.
2018-10-19 17:54:12 +02:00
Pierre Neidhardt c4d4ae1e16
gnu: Add sbcl-slime-swank.
* gnu/packages/lisp.scm (sbcl-slime-swank): New variable.
2018-10-19 17:54:12 +02:00
Pierre Neidhardt 109ce303f4
gnu: Add cl-string-match.
* gnu/packages/lisp.scm (cl-string-match, ecl-cl-string-match, sbcl-cl-string-match): New variables.
2018-10-19 17:54:11 +02:00
Pierre Neidhardt a927eb3653
gnu: Add ascii-strings.
* gnu/packages/lisp.scm (cl-ascii-strings, ecl-ascii-strings, sbcl-ascii-strings): New variables.
2018-10-19 17:54:11 +02:00
Pierre Neidhardt 8d8d1c8d6c
gnu: Add mgl-pax.
* gnu/packages/lisp.scm (cl-mgl-pax, ecl-mgl-pax, sbcl-mgl-pax): New variables.
2018-10-19 17:54:11 +02:00
Pierre Neidhardt f07efbf1e6
gnu: Add pythonic-string-reader.
* gnu/packages/lisp.scm (cl-pythonic-string-reader, ecl-pythonic-string-reader, sbcl-pythonic-string-reader): New variables.
2018-10-19 17:54:11 +02:00
Pierre Neidhardt fb8c4bc6ba
gnu: Add named-readtables.
* gnu/packages/lisp.scm (cl-named-readtables, ecl-named-readtables, sbcl-named-readtables): New variables.

FIX named-readtables
2018-10-19 17:54:11 +02:00
Pierre Neidhardt e549ba0598
gnu: Add ironclad.
* gnu/packages/lisp.scm (cl-ironclad, ecl-ironclad, sbcl-ironclad): New variables.
2018-10-19 17:54:11 +02:00
Pierre Neidhardt fbdd9b2c8b
gnu: Add nibbles.
* gnu/packages/lisp.scm (cl-nibbles, ecl-nibbles, sbcl-nibbles): New variables.
2018-10-19 17:54:11 +02:00
Pierre Neidhardt 5800c538a1
gnu: Add rt.
* gnu/packages/lisp.scm (cl-rt, ecl-rt, sbcl-rt): New variables.
2018-10-19 17:54:11 +02:00
Pierre Neidhardt 1855496813
gnu: Add cl-fad.
* gnu/packages/lisp.scm (cl-fad, ecl-cl-fad, sbcl-cl-fad): New variables.
2018-10-19 17:54:11 +02:00
Pierre Neidhardt 1a3d39c446
gnu: Add 3bmd-ext-code-blocks.
* gnu/packages/lisp.scm (cl-3bmd-ext-code-blocks, ecl-3bmd-ext-code-blocks, sbcl-3bmd-ext-code-blocks): New variables.
2018-10-19 17:54:11 +02:00
Pierre Neidhardt ef0c3e1429
gnu: Add 3bmd.
* gnu/packages/lisp.scm (cl-3bmd, ecl-3bmd, sbcl-3bmd): New variables.
2018-10-19 17:54:10 +02:00
Pierre Neidhardt b4ba1c0a38
gnu: Add colorize.
* gnu/packages/lisp.scm (cl-colorize, ecl-colorize, sbcl-colorize): New variables.
2018-10-19 17:54:10 +02:00
Pierre Neidhardt 6a1761cbf6
gnu: Add html-encode.
* gnu/packages/lisp.scm (cl-html-encode, ecl-html-encode, sbcl-html-encode): New variables.
2018-10-19 17:54:10 +02:00
Pierre Neidhardt 141001597d
gnu: Add split-sequence.
* gnu/packages/lisp.scm (cl-split-sequence, ecl-split-sequence, sbcl-split-sequence): New variables.
2018-10-19 17:54:10 +02:00
Pierre Neidhardt bdf83297a8
gnu: Add esrap.
* gnu/packages/lisp.scm (cl-esrap, ecl-esrap, sbcl-esrap): New variables.
2018-10-19 17:54:10 +02:00
Pierre Neidhardt 989cd79b5c
gnu: Add eos.
* gnu/packages/lisp.scm (cl-eos, ecl-eos, sbcl-eos): New variables.
2018-10-19 17:54:10 +02:00
Pierre Neidhardt 8f41fa066e
gnu: Add jpl-queues.
* gnu/packages/lisp.scm (cl-jpl-queues, ecl-jpl-queues, sbcl-jpl-queues): New variables.
2018-10-19 17:54:10 +02:00
Pierre Neidhardt 232e1abce7
gnu: Add jpl-util.
* gnu/packages/lisp.scm (cl-jpl-util, ecl-jpl-util, sbcl-jpl-util): New variables.
2018-10-19 17:54:10 +02:00
Pierre Neidhardt ef091e9155
gnu: Add cl-yacc.
* gnu/packages/lisp.scm (cl-cl-yacc, ecl-cl-yacc, sbcl-cl-yacc): New variables.
2018-10-19 17:54:10 +02:00
Pierre Neidhardt 2d418bfa39
gnu: Add babel.
* gnu/packages/lisp.scm (cl-babel, ecl-babel, sbcl-babel): New variables.
2018-10-19 17:54:09 +02:00
Pierre Neidhardt 4ef9ddbdae
gnu: Add hu.dwim.stefil.
* gnu/packages/lisp.scm (cl-hu.dwim.stefil, ecl-hu.dwim.stefil, sbcl-hu.dwim.stefil): New variables.
2018-10-19 17:54:09 +02:00
Pierre Neidhardt 0cd6fb4970
gnu: Add hu.dwim.asdf.
* gnu/packages/lisp.scm (cl-hu.dwim.asdf, ecl-hu.dwim.asdf, sbcl-hu.dwim.asdf): New variables.
2018-10-19 17:54:09 +02:00
Pierre Neidhardt 8c661ff1ef
gnu: Add trivial-features.
* gnu/packages/lisp.scm (cl-trivial-features, ecl-trivial-features, sbcl-trivial-features): New variables.
2018-10-19 17:54:09 +02:00
Pierre Neidhardt 99c6124229
gnu: Add cl-strings.
* gnu/packages/lisp.scm (cl-strings, sbcl-cl-strings, ecl-cl-strings): New variables.
2018-10-19 17:25:40 +02:00
Pierre Neidhardt e7b2937d19
gnu: Add texlive-latex-koma-script.
* gnu/packages/tex.scm (texlive-latex-koma-script): New variable.
2018-10-19 15:17:55 +02:00
Pierre Neidhardt 17ef5f1ff9
gnu: Add texlive-latex-pgf.
* gnu/packages/tex.scm (texlive-latex-pgf): New variable.
2018-10-19 15:16:40 +02:00
Pierre Neidhardt 910d67fb95
gnu: Add texlive-generic-ulem.
* gnu/packages/tex.scm (texlive-generic-ulem): New variable.
2018-10-19 15:11:52 +02:00
Pierre Neidhardt 0e73c11bb2
gnu: Add texlive-latex-eukdate.
* gnu/packages/tex.scm (texlive-latex-eukdate): New variable.
2018-10-19 15:10:18 +02:00
Pierre Neidhardt 707babdde4
gnu: Add texlive-latex-needspace.
* gnu/packages/tex.scm (texlive-latex-needspace): New variable.
2018-10-19 15:10:02 +02:00
Pierre Neidhardt b718793e2a
gnu: Add texlive-latex-ms.
* gnu/packages/tex.scm (texlive-latex-ms): New variable.
2018-10-19 15:08:45 +02:00
Rutger Helling 0fd874ebd1
gnu: youtube-dl: Update to 2018.10.05.
* gnu/packages/video.scm (youtube-dl): Update to 2018.10.05.
2018-10-19 11:43:35 +02:00
Chris Marusich 2f4d43584c
system: Rename .zlogin to .zprofile.
Reported by Meiyo Peng <meiyo.peng@gmail.com>.

* gnu/system/shadow.scm (default-skeletons): Rename zlogin to zprofile.
2018-10-19 00:45:20 -07:00
Rutger Helling 7d1f21c69a
gnu: vulkan-headers: Update to 1.1.85.0.
* gnu/packages/vulkan.scm (vulkan-headers): Update to 1.1.85.0.
* gnu/packages/vulkan.scm (vulkan-loader): Update hash.
* gnu/packages/vulkan.scm (vulkan-tools): Update hash.
2018-10-19 08:43:29 +02:00
Leo Famulari eed00f93e8
gnu: libssh: Update to 0.7.6 [fixes CVE-2018-10933].
* gnu/packages/ssh.scm (libssh): Update to 0.7.6.
* gnu/packages/patches/libssh-hostname-parser-bug.patch: Adjust patch.
2018-10-18 23:08:45 -04:00
Mark H Weaver 75b2afd953
gnu: linux-libre: Update to 4.18.15.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.15.
(%linux-libre-hash): Update hash.
2018-10-18 22:53:00 -04:00
Mark H Weaver ef8e7e3298
gnu: linux-libre@4.14: Update to 4.14.77.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.77.
(%linux-libre-4.14-hash): Update hash.
2018-10-18 22:52:58 -04:00
Mark H Weaver 1e672a01be
gnu: linux-libre@4.9: Update to 4.9.134.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.134.
2018-10-18 22:52:56 -04:00
Marius Bakke 29f40ee547
gnu: libgit2: Update to 0.26.7.
* gnu/packages/version-control.scm (libgit2): Update to 0.26.7.
2018-10-19 03:18:57 +02:00
Marius Bakke 2c0a3ed1f9
gnu: tmux: Update to 2.8.
* gnu/packages/tmux.scm (tmux): Update to 2.8.
2018-10-19 03:18:57 +02:00
Marius Bakke a908ffd1ab
gnu: notmuch: Update to 0.28.
* gnu/packages/mail.scm (notmuch): Update to 0.28.
2018-10-19 03:18:57 +02:00
Marius Bakke 3d472b5ee1
services: WPA Supplicant: Fix syntax error.
This is a followup to commit acce0a474c.  No
idea how these disappeared.. :-/

* gnu/services/networking.scm (wpa-supplicant-shepherd-service): Add missing
parens.
2018-10-19 03:18:22 +02:00
Mark H Weaver 402e60859d
gnu: linux-libre: Enable SHPC PCI Hotplug driver on ARM64.
Fixes <https://bugs.gnu.org/32840> on ARM64.

* gnu/packages/aux-files/linux-libre/4.18-arm64.conf: Add
CONFIG_HOTPLUG_PCI_SHPC=y.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-19 00:11:42 +02:00
Ludovic Courtès d36cd88873
gnu: grub-efi: Fix an uninitialized variable issue.
* gnu/packages/patches/grub-check-error-efibootmgr.patch: Add hunk to
correct uninitialized variable.
2018-10-19 00:11:42 +02:00
Alex Vong 33428d1267
gnu: javacc: Bootstrap from javacc-4 instead of bootstrap binary.
* gnu/packages/java.scm (javacc)[source](snippet): Delete bootstrap binary.
[arguments]: Set 'bootstrap-jar' path.
[native-inputs]: Add 'javacc-4'.
2018-10-18 14:59:55 +02:00
Alex Vong 6662d65f96
gnu: javacc: Use snippet to delete bundled jars.
* gnu/packages/java.scm (javacc-4)[source](snippet, modules): New fields.
[arguments]: Remove 'delete-bundled-libs' phase and add 'delete-tests'
phase.
* gnu/packages/java.scm (javacc)[source](snippet, modules): New fields.
[arguments]: Remove 'delete-bundled-libs' phase.
2018-10-18 14:59:52 +02:00
Alex Vong 53fb0476ec
gnu: javacc: 'javacc' now inherits from 'javacc-4'.
* gnu/packages/java.scm (javacc, javacc-4): 'javacc' now inherits from
'javacc-4' instead of the opposite around.
2018-10-18 14:59:44 +02:00
Ludovic Courtès 39d7fdce45
services: dhcp-client: Deprecate 'dhcp-client-service' procedure.
* gnu/services/networking.scm (dhcp-client-service-type): Add default
value.
* gnu/system/examples/bare-bones.tmpl: Use (service
dhcp-client-service-type) instead of (dhcp-client-service).
* gnu/system/examples/beaglebone-black.tmpl: Likewise.
* gnu/tests/base.scm (%avahi-os): Likewise.
* gnu/tests/databases.scm (%memcached-os): Likewise.
(%mongodb-os): Likewise.
* gnu/tests/dict.scm (%dicod-os): Likewise.
* gnu/tests/mail.scm (%opensmtpd-os): Likewise.
(%exim-os): Likewise.
(%dovecot-os): Likewise.
* gnu/tests/messaging.scm (run-xmpp-test): Likewise.
(run-bitlbee-test): Likewise.
* gnu/tests/monitoring.scm (%prometheus-node-exporter-os): Likewise.
* gnu/tests/networking.scm (%inetd-os): Likewise.
(run-iptables-test): Likewise.
* gnu/tests/nfs.scm (%base-os): Likewise.
* gnu/tests/rsync.scm (%rsync-os): Likewise.
* gnu/tests/ssh.scm (run-ssh-test): Likewise.
* gnu/tests/version-control.scm (%cgit-os): Likewise.
(%git-http-os): Likewise.
(%gitolite-os): Likewise.
* gnu/tests/virtualization.scm (%libvirt-os): Likewise.
* gnu/tests/web.scm (%httpd-os): Likewise.
(%nginx-os): Likewise.
(%varnish-os): Likewise.
(%php-fpm-os): Likewise.
(%hpcguix-web-os): Likewise.
(%tailon-os): Likewise.
* tests/guix-system.sh: Likewise.
* doc/guix.texi (Networking Services): Document
'dhcp-client-service-type' and remove 'dhcp-client-service'.
2018-10-18 01:12:22 +02:00
Kei Kebreau b286e3b368
gnu: retux: Update to 1.3.6.
* gnu/packages/games.scm (retux): Update to 1.3.6.
2018-10-17 17:04:27 -04:00
Kei Kebreau 0592db2873
gnu: wesnoth: Update to 1.14.5.
* gnu/packages/games.scm (wesnoth): Update to 1.14.5.
2018-10-17 16:27:38 -04:00
Marius Bakke acce0a474c
services: wpa-supplicant: Extend to support configuration parameters.
This allows using WPA Supplicant "standalone" without an additional
network manager.  The default configuration is unchanged.

* gnu/services/networking.scm (<wpa-supplicant-configuration>): New record type.
(wpa-supplicant-shepherd-service): Pass configuration records to the daemon.
(wpa-supplicant-service-type): Adjust accordingly.
* doc/guix.texi (Networking Services): Document the new service type.
2018-10-17 20:34:37 +02:00
Marius Bakke a55ebe2e3a
gnu: python2: Add upstream security fixes.
This addresses CVE-2018-{1060,1061,14647,1000802}.

* gnu/packages/patches/python2-CVE-2018-1000802.patch,
gnu/packages/patches/python2-CVE-2018-1060.patch,
gnu/packages/patches/python2-CVE-2018-1061.patch,
gnu/packages/patches/python2-CVE-2018-14647.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-2/fixed): New variable.
(python-2.7)[replacement]: New field.
(python2-minimal): Use PACKAGE/INHERIT.
2018-10-17 20:34:37 +02:00
Marius Bakke 90aeaee861
gnu: python: Fix CVE-2018-14647.
* gnu/packages/patches/python-CVE-2018-14647.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-3/fixed): New variable.
(python-3.6)[replacement]: New field.
(python-minimal, python-debug, wrap-python3): Use PACKAGE/INHERIT instead of
standard inheritance.
2018-10-17 20:34:37 +02:00
Efraim Flashner 1d43756107
gnu: strace: Check before enabling personalities.
* gnu/packages/linux.scm (strace)[arguments]: Add configure flag to
check for personality support.
2018-10-17 21:28:05 +03:00
Kei Kebreau 82402f76be
gnu: hyperrogue: Update to 10.4t.
* gnu/packages/games.scm (hyperrogue): Update to 10.4t.
[arguments]: Modify 'make-flags'. Modify 'configure' and 'install' phases.
2018-10-17 13:47:41 -04:00
Pierre Neidhardt 05f8943f04
gnu: emacs-helm-system-packages: Add recutils to inputs.
* gnu/packages/emacs.scm (emacs-helm-system-packages)[inputs]: Use recutils.
2018-10-17 10:37:35 +02:00
Efraim Flashner 15b283e712
gnu: streamlink: Update to 0.14.2.
* gnu/packages/video.scm (streamlink): Update to 0.14.2.
[source]: Download from pypi.
2018-10-17 11:24:18 +03:00
Maxim Cournoyer 24220e0f09
gnu: emacs-nodejs-repl: Update to 0.2.0.
* gnu/packages/emacs.scm (emacs-nodejs-repl): Update to 0.2.0.
2018-10-16 23:02:50 -04:00
Eric Bavier 6f1ce09d79
gnu: Add guix-minimal.
* gnu/packages/guile.scm (guile-2.0.13): New variable.
* gnu/packages/package-management.scm (guix)[arguments]: Adjust 'wrap-program'
phase to handle "missing" inputs.
(guix-minimal): New variable.
2018-10-16 17:09:15 -05:00
Eric Bavier c8e3651a82
gnu: guile2.0-guix: Fix build.
* gnu/packages/gnupg.scm (guile2.0-gcrypt): New variable.
* gnu/packages/guile.scm (guile2.0-sqlite3): New variable.
* gnu/packages/package-management.scm (guile2.0-guix)[propagated-inputs]: Use
them.
2018-10-16 17:09:15 -05:00
Leo Famulari 02d5ed4a27
gnu: GStreamer plugins: Update MP3 features for GStreamer 1.14.
GStreamer moved all MPEG-1 audio (mp1, mp2, and mp3) decoders and encoders to
the group of "good" plugins in GStreamer 1.14.0. See the 'NEWS' file for more
information.

* gnu/packages/gstreamer.scm (gst-plugins-ugly)[inputs]: Remove lame, mpg123,
and twolame.
(gst-plugins-bad): Remove mpg123.
(gst-plugins-good): Add lame, mpg123, and twolame.
2018-10-16 13:40:14 -04:00
Rutger Helling 2d4a753a7c
gnu: xpra: Update to 2.4.
* gnu/packages/xorg.scm (xpra): Update to 2.4.
2018-10-16 14:27:28 +02:00
Clément Lassieur f1376bfabe
gnu: emacs-exwm: Update to 0.20.
* gnu/packages/emacs.scm (emacs-exwm): Update to 0.20.
[source]: Remove emacs-exwm-fix-fullscreen-issue.patch.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/patches/emacs-exwm-fix-fullscreen-issue.patch: Remove patch.
2018-10-16 11:10:04 +02:00
Clément Lassieur 503fe87098
gnu: emacs-xelb: Update to 0.16.
* gnu/packages/emacs.scm (emacs-xelb): Update to 0.16.
2018-10-16 10:57:53 +02:00
Ludovic Courtès 532f92c8f3
gnu: guix: Update to f9a8fce.
* gnu/packages/package-management.scm (guix): Update to f9a8fce.
2018-10-15 23:54:20 +02:00
Efraim Flashner 2ab321ca37
gnu: go@1.4: Add support for aarch64-linux.
* gnu/packages/golang.scm (go@1.4)[arguments]: Build for armhf-linux
when building for aarch64-linux.
[supported-systems]: Add aarch64-linux.
2018-10-15 14:21:07 +03:00
Rutger Helling 2c89b4b550
gnu: wine-staging: Update to 3.18.
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 3.18.
* gnu/packages/wine.scm (wine-staging): Update to 3.18.
2018-10-15 10:50:48 +02:00
Efraim Flashner b7028a16e6
gnu: x265: Fix building on armhf-linux and aarch64-linux.
* gnu/packages/video.scm (x265)[source]: Update list of patches.
[arguments]: Change configure flag to ensure PIC for all architectures.
* gnu/packages/patches/x265-arm-asm-primitives.patch: Remove file.
* gnu/packages/patches/x265-detect512-all-arches.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update patch registry.
2018-10-15 11:40:34 +03:00
Tobias Geerinckx-Rice 2d5fa80e83
gnu: audacity: Update home page.
* gnu/packages/audio.scm (audacity)[home-page]: Update.
2018-10-15 06:19:38 +02:00
Tobias Geerinckx-Rice e02013b7de
gnu: hexchat: Use HTTPS home page.
* gnu/packages/messaging.scm (hexchat)[home-page]: Use HTTPS.
2018-10-15 06:19:38 +02:00
Tobias Geerinckx-Rice 4a147986a0
gnu: haveged: Teach the controversy.
* gnu/packages/linux.scm (haveged)[description]: Suggest adding
additional entropy sources.
2018-10-15 06:19:38 +02:00
Tobias Geerinckx-Rice dfe05297f3
gnu: x265: Update to 2.9.
* gnu/packages/video.scm (x265): Update to 2.9.
[source]: Remove x265-fix-ppc64le-build.patch.
* gnu/packages/patches/x265-fix-ppc64le-build.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-10-15 06:19:37 +02:00
Tobias Geerinckx-Rice 4702d45280
gnu: opensm: Update to 3.3.21.
* gnu/packages/fabric-management.scm (opensm): Update to 3.3.21.
[source]: Update tarball URI.
[native-inputs]: Add autoconf, automake, and libtool.
[arguments]: Rename 'doc' phase to 'install-doc'.
Omit AUTHORS and ChangeLog files. They are more than a decade old.
2018-10-15 06:19:37 +02:00
Tobias Geerinckx-Rice 9cac043cc0
gnu: restic: Update to 0.9.3.
* gnu/packages/backup.scm (restic): Update to 0.9.3.
[arguments]: Disable 'restic self-update'.
2018-10-15 06:19:37 +02:00
Tobias Geerinckx-Rice 3a6e1fe8c8
gnu: perl-xml-feed: Update to 0.55.
* gnu/packages/xml.scm (perl-xml-feed): Update to 0.55.
2018-10-15 06:19:36 +02:00
Maxim Cournoyer 66a9f08bb9
gnu: Add python-falcon-cors.
* gnu/packages/python-web.scm (python-falcon-cors): New variable.
2018-10-14 22:50:27 -04:00
Maxim Cournoyer bb840999c8
gnu: Add python-falcon.
* gnu/packages/python-web.scm (python-falcon): New variable.
2018-10-14 22:02:40 -04:00
Maxim Cournoyer 0731fc1ce7
gnu: python-mimeparse: Update to 1.6.0.
* gnu/packages/python.scm (python-mimeparse): Update to 1.6.0.
[phases]: Enable tests with a custom check phase.
2018-10-14 22:02:40 -04:00
Mark H Weaver 614f49c49a
gnu: linux-libre: Update to 4.18.14.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.14.
(%linux-libre-hash): Update hash.
2018-10-14 19:27:46 -04:00
Mark H Weaver b0fe6b5785
gnu: linux-libre@4.14: Update to 4.14.76.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.76.
(%linux-libre-4.14-hash): Update hash.
2018-10-14 19:13:56 -04:00
Mark H Weaver f266e82ad2
gnu: linux-libre@4.9: Update to 4.9.133.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.133.
2018-10-14 19:09:24 -04:00
Mark H Weaver 2dd1bfcb58
gnu: linux-libre@4.4: Update to 4.4.161.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.161.
2018-10-14 19:07:35 -04:00
Efraim Flashner 89f9df6cfd
gnu: icecat: Build with rust-1.24.
* gnu/packages/gnuzilla.scm (icecat)[native-inputs]: Use the oldest
compatable rust over newer releases when building icecat.
2018-10-14 09:42:54 +03:00
Brett Gilio 40f856fae8
gnu: csound: Update to 6.11.0.
* gnu/packages/audio.scm (csound): Update to 6.11.0.
[home-page]: Change to "https://csound.com/".

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-14 10:52:12 +08:00
Leo Famulari d7814696b8
gnu: python-configargparse: Use pypi-uri.
* gnu/packages/python.scm (python-configargparse,
python2-configargparse)[source]: Use pypi-uri.
2018-10-12 23:42:43 -04:00
Leo Famulari f1be3735db
gnu: khal: Update to 0.9.10.
* gnu/packages/calendar.scm (khal): Update to 0.9.10.
2018-10-12 23:42:43 -04:00
Leo Famulari 3c4d307e86
gnu: python-icalendar: Update to 4.0.2.
* gnu/packages/python.scm (python-icalendar: Update to 4.0.2.
2018-10-12 23:42:43 -04:00
Leo Famulari 3584eeb9a1
gnu: ImageMagick: Update to 6.9.10-12.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.10-12.
2018-10-12 23:42:39 -04:00
Leo Famulari a60e868629
gnu: Wireshark: Update to 2.6.4 [fixes CVE-2018-{12086,18225,18226,18227}].
* gnu/packages/networking.scm (wireshark): Update to 2.6.4.
2018-10-12 22:18:22 -04:00
宋文武 6826f1e1ed
gnu: Add libpd.
* gnu/packages/music.scm (libpd): New variable.
2018-10-12 22:23:58 +08:00
Christopher Baines 50135ff896
gnu: Remove duplicate ruby-yard package definition.
* gnu/packages/ruby.scm (ruby-yard): Remove one of the two package
definitions, and update the other to the latest release.
2018-10-12 08:23:17 +01:00
Christopher Baines e9ab649e1e
gnu: Remove duplicate ruby-concurrent package definition.
* gnu/packages/ruby.scm (ruby-concurrent): Remove one of the two definitions
for this variable.
2018-10-12 08:23:15 +01:00
Vagrant Cascadian e1d1ec1435
gnu: u-boot: Update to 2018.09.
* gnu/packages/bootloaders.scm (u-boot): Update to 2018.09.
(u-boot-tools)[arguments]: Substitute "coverage" for "python-coverage". Update
workaround for only 99% test coverage.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-10-11 17:28:53 -04:00
Brett Gilio fc346e30a0
gnu: godot: Update to 3.0.6.
* gnu/packages/game-development.scm (godot): Update to 3.0.6.
2018-10-11 16:42:04 -04:00
Leo Famulari 3bee949b03
gnu: Krita: Update to 4.1.5.
* gnu/packages/kde.scm (krita): Update to 4.1.5.
2018-10-11 13:10:50 -04:00
Ludovic Courtès ed9d7cb4d9
gnu: guix-daemon: Run 'guix' from /var/guix/profiles/per-user/root.
Fixes <https://bugs.gnu.org/32183>.
Reported by Pjotr Prins <pjotr.public12@thebird.nl>
and Konrad Hinsen <konrad.hinsen@fastmail.net>.

* gnu/packages/package-management.scm (guix-daemon)[arguments]: Execute
/var/guix/profiles/per-user/root/current-guix/bin/guix instead of ~root/….
2018-10-11 18:29:11 +02:00
Ricardo Wurmus e8a7eab169
gnu: kallisto: Update to 0.44.0.
* gnu/packages/bioinformatics.scm (kallisto): Update to 0.44.0.
[source]: Fetch from git.
[arguments]: Add build phase to use htslib from Guix.
[inputs]: Add htslib.
2018-10-11 16:12:11 +02:00
Ricardo Wurmus a8fa86c477
gnu: Add python-cvxopt.
* gnu/packages/maths.scm (python-cvxopt, python2-cvxopt): New variables.
2018-10-11 10:30:30 +02:00
Mark H Weaver 2faf2edf58
gnu: linux-libre: Update to 4.18.13.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.18.13.
(%linux-libre-hash): Update hash.
2018-10-10 23:19:36 -04:00
Mark H Weaver 4f1d7e386b
gnu: linux-libre@4.14: Update to 4.14.75.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.75.
(%linux-libre-4.14-hash): Update hash.
2018-10-10 23:18:28 -04:00
Mark H Weaver 0e8f0803b5
gnu: linux-libre@4.9: Update to 4.9.132.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.132.
2018-10-10 23:17:53 -04:00
Mark H Weaver e05fe1f917
gnu: linux-libre@4.4: Update to 4.4.160.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.160.
2018-10-10 23:17:14 -04:00
Tobias Geerinckx-Rice dc5282f9ea
gnu: hexchat: Update to 2.14.2.
* gnu/packages/messaging.scm (hexchat): Update to 2.14.2.
2018-10-11 00:01:44 +02:00
Tobias Geerinckx-Rice 272fc9dca3
gnu: tlp: Return #t from phases.
* gnu/packages/linux.scm (tlp)[argument]: Return #t all from phases.
2018-10-11 00:01:44 +02:00
Tobias Geerinckx-Rice 43abffa1a3
gnu: hdparm: Update to 9.56.
* gnu/packages/linux.scm (hdparm): Update to 9.56.
2018-10-10 23:49:14 +02:00
Tobias Geerinckx-Rice 50298d4a81
gnu: perftest: Update to 4.4-0.4.
* gnu/packages/linux.scm (perftest): Update to 4.4-0.4.
2018-10-10 23:49:14 +02:00
Tobias Geerinckx-Rice b71a34887b
gnu: haveged: Mark up description.
* gnu/packages/linux.scm (haveged)[description]: Use @dfn{} and
split into two paragraphs.
2018-10-10 23:49:13 +02:00
Tobias Geerinckx-Rice 893c340c3a
gnu: haveged: Update to 1.9.4.
* gnu/packages/linux.scm (haveged): Update to 1.9.4.
[source]: Use GIT-FETCH and GIT-FILE-NAME from new (development) home.
2018-10-10 23:49:13 +02:00
Tobias Geerinckx-Rice f825faa502
gnu: python-pickleshare: Update to 0.7.5.
* gnu/packages/databases.scm (python-pickleshare): Update to 0.7.5.
2018-10-10 23:49:13 +02:00
Tobias Geerinckx-Rice 43c97cceae
gnu: ranger: More test tweaks.
There's no functional difference between 'make test_pytest' and running
'py.test' directly, but there may be in future.

This follows up on commit 14173b3c6765bd8fcb2b12ea28fc27226645c7e1.

* gnu/packages/disk.scm (ranger)[arguments]: Use #:test-target to run
the (same) tests through 'make'.
[native-inputs]: Remove left-over python-flake8 and python-pylint.
2018-10-10 23:49:13 +02:00
Danny Milosavljevic 47f9fb18a3
gnu: Add kicad-symbols.
* gnu/packages/engineering.scm (kicad-symbols): New variable.
2018-10-10 23:04:18 +02:00
Tobias Geerinckx-Rice 3d0fdb34a2
gnu: ranger: Update to 1.9.2.
* gnu/packages/disk.scm (ranger): Update to 1.9.2.
[native-inputs]: Order alphabetically.
[arguments]: Actually run tests and remove useless #:test-target.
2018-10-10 22:12:03 +02:00
Tobias Geerinckx-Rice 3820d51bec
Order (gnu packages disk) module imports alphabetically.
* gnu/packages/disk.scm (define-module): Order module imports
alphabetically.
2018-10-10 22:12:02 +02:00
Tobias Geerinckx-Rice 1f033795e2
gnu: ndctl: Update to 63.
* gnu/packages/disk.scm (ndctl): Update to 63.
[source]: Use GIT-FILE-NAME.
[native-inputs]: Add bash-completion.
[arguments]: Add '--disable-asciidoctor' and '--without-systemd'
 #:configure-flags.  Don't bother patching unused ./autogen.sh in
'patch-FHS-file-names' phase.
2018-10-10 22:12:02 +02:00
Tobias Geerinckx-Rice 4273a7ef65
gnu: libblockdev: Update to 2.20.
* gnu/packages/disk.scm (libblockdev): Update to 2.20.
[license]: Update to match fixed licence headers.
2018-10-10 22:12:02 +02:00
Tobias Geerinckx-Rice 8984dbd0de
gnu: volume-key: Update to 0.3.12.
* gnu/packages/disk.scm (volume-key): Update to 0.3.12.
2018-10-10 22:12:02 +02:00
Pierre Neidhardt 8f3dc810b1
gnu: emacs-slime: Update to 2.22.
* gnu/packages/emacs.scm (emacs-slime): Update to 2.22.
2018-10-10 17:45:07 +02:00
Pierre Neidhardt 3e70c3a06e
gnu: emacs-evil-collection: Update to 0.0.1.
* gnu/packages/emacs.scm (emacs-evil-collection): Update to 0.0.1.
2018-10-10 17:43:51 +02:00
Pierre Neidhardt 903378910e
gnu: Add numlockx.
* gnu/packages/xdisorg.scm (numlockx): New variable.
2018-10-10 17:32:53 +02:00
Ludovic Courtès 121f32a104
gnu: guile-next: Update to 2.9.1.
* gnu/packages/guile.scm (guile-next): Update to 2.9.1.
[native-inputs, arguments]: Remove.
[properties]: New field.
2018-10-10 14:48:46 +02:00
Ludovic Courtès 6b009dbfea
gnu: openal: Update source and home page URLs.
Fixes <https://bugs.gnu.org/33000>.
Reported by Nam Nguyen <namn@berkeley.edu>.

* gnu/packages/audio.scm (openal)[source, home-page]: Update URLs.
2018-10-10 14:30:39 +02:00
Ludovic Courtès 296ad59216
gnu: haunt: Make sure Guile-CommonMark and Guile-Reader are always visible.
* gnu/packages/guile.scm (haunt)[arguments]: In 'wrap-haunt' phase, add
Guile-Reader and Guile-CommonMark to the search paths.
2018-10-10 13:48:21 +02:00
Mark Meyer a50f5258c7
gnu: Add kdenlive.
* gnu/packages/kde.scm (kdenlive): New variable.

Co-authored-by: Gábor Boskovits <boskovits@gmail.com>
Signed-off-by: Gábor Boskovits <boskovits@gmail.com>
2018-10-10 11:11:14 +02:00
Mark Meyer e7cdd311ae
gnu: mlt: Prepare for kdenlive.
* gnu/packages/video.scm (mlt): Update to 6.10.0.
[inputs]: Add frei0r-plugins, gdk-pixbuf, gtk+-2, qtbase,qtsvg.
[make-flags]: Add "CXX=g++ -std=gnu++11".

Co-authored-by: Gábor Boskovits <boskovits@gmail.com>
Signed-off-by: Gábor Boskovits <boskovits@gmail.com>
2018-10-10 11:10:46 +02:00
Efraim Flashner 5ff15b86fc
gnu: lisp.scm: Arrange imported modules alphabetically.
* gnu/packages/lisp.scm: Arrange imported modules alphabetically.
2018-10-10 10:41:39 +03:00
Efraim Flashner e4c399fe15
gnu: clisp: Update to 2.49.92.
* gnu/packages/lisp.scm (clisp): Update to 2.49.92.
[source]: Switch to git-fetch. Remove unneeded patch.
[arguments]: Remove '--enable-portability' flag, add CFLAGS for
armhf-linux. Update list of files needing substitutions in custom
'patch-sh-and-pwd phase.
[home-page]: Update to new home-page.
* gnu/packages/patches/clisp-glibc-2.26.patch: Remove file.
& gnu/local.mk (dist_patch_DATA): Remove it.
2018-10-10 10:41:37 +03:00
Rutger Helling 006a1d59ba
gnu: vkd3d: Update to 1.1.
* gnu/packages/vulkan.scm (vkd3d): Update to 1.1.
2018-10-10 09:34:09 +02:00
Danny Milosavljevic 9096c00629
gnu: java-w3c-svg: Update synopsis and description.
* gnu/packages/batik.scm (java-w3c-svg-1.0)[synopsis]: Modify.
[description]: Modify.
(java-w3c-svg)[synopsis]: Modify.
[description]: Modify.
2018-10-09 21:44:11 +02:00
Danny Milosavljevic b2eda4a55e
gnu: java-w3c-svg: Fix build.
Reported-by: Björn Höfling <bjoern.hoefling@bjoernhoefling.de>

* gnu/packages/batik.scm (java-w3c-svg)[arguments]<#:phases>: Delete
"patch-interface" phase.
2018-10-09 21:44:09 +02:00
Ludovic Courtès 64965a068d
gnu: Add ttf2pt1.
* gnu/packages/fontutils.scm (ttf2pt1): New variable.
2018-10-09 18:54:12 +02:00
Efraim Flashner 1fe57b3746
gnu: bs1770gain: Update to 0.5.0.
* gnu/packages/audio.scm (bs1770gain): Update to 0.5.0.
2018-10-09 12:04:34 +03:00
Efraim Flashner 8658b81b1a
gnu: augeas: Update to 1.11.0.
* gnu/packages/augeas.scm (augeas): Update to 1.11.0.
[source]: Remove snippet.
2018-10-09 11:01:53 +03:00
Efraim Flashner 8d18edde75
* gnu: agg: Replace bootstrap phase.
* gnu/packages/graphics.scm (agg)[arguments]: Remove custom 'autoreconf
phase and replace default 'bootstrap phase. Use INVOKE.
[native-inputs]: Remove bash.
2018-10-09 10:33:07 +03:00
Efraim Flashner 31f45cf7be
gnu: agg: Don't build examples.
* gnu/packages/graphics.scm (agg)[arguments]: Disable building the
examples.
2018-10-09 10:33:03 +03:00
Efraim Flashner 07b0662754
gnu: abiword: Remove wmf support.
* gnu/packages/abiword.scm (abiword)[arguments]: Remove 'wmf' from the
list of enabled plugins.
2018-10-09 09:56:35 +03:00
Tobias Geerinckx-Rice 3880537c74
gnu: zstd: Don't use unstable tarball.
* gnu/packages/compression.scm (zstd)[source]: Use release archive.
2018-10-09 05:47:16 +02:00
Tobias Geerinckx-Rice 317e80cead
gnu: unison: End all phases with #t.
* gnu/packages/ocaml.scm (unison)[arguments]: End all phases with #t.
2018-10-09 05:42:14 +02:00
Tobias Geerinckx-Rice f6ccb95a86
gnu: docx2txt: End phases with #t.
* gnu/packages/textutils.scm (docx2txt)[arguments]: End 'fix-install'
phase with #t.
2018-10-09 05:42:14 +02:00
Tobias Geerinckx-Rice de68ad095d
gnu: zstd: Update to 1.3.6.
* gnu/packages/compression.scm (zstd): Update to 1.3.6.
[source]: Remove merged patches.
* gnu/packages/patches/zstd-fix-stdin-list-test.patch,
gnu/packages/patches/zstd-fix-stdin-list-without-tty.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-10-09 05:42:14 +02:00
Thorsten Wilms 65b8d61073
gnu: Add gimp-resynthesizer.
* gnu/packages/gimp.scm (gimp-resynthesizer): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-10-08 23:19:35 +02:00