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6119 Commits

Author SHA1 Message Date
Ricardo Wurmus 9a067efdb2 gnu: pbtranscript-tofu: Update to 2.2.3. 
* gnu/packages/bioinformatics.scm (pbtranscript-tofu): Update to 2.2.3.
  [source]: Remove bundled Cython sources in a snippet.  Replace
  ".tar.gz" extension in file-name field with "-checkout".
  [arguments]: Replace "enter-directory-and-clean-up" phase with
  "enter-directory" phase, and add "patch-setuppy" phase.
  [inputs]: Add python2-h5py.  Move python2-cython ...
  [native-inputs]: ... to this field.
 2015-10-28 16:26:58 +01:00
Andreas Enge fb8d1be8e1 gnu: pari-gp: Add X11 input. 
* gnu/packages/algebra.scm (pari-gp)[inputs]: Add libx11, which enables
  plotting functions.
 2015-10-28 15:57:20 +01:00
Ludovic Courtès 35b50a7535 container: Remove unnecessary CLONE_CHILD_* flags. 
* gnu/build/linux-container.scm (namespaces->bit-mask): Remove
  CLONE_CHILD_CLEARTID and CLONE_CHILD_SETTID, which are unneeded.
  Discussed at <http://bugs.gnu.org/21694>.
 2015-10-28 15:31:44 +01:00
宋文武 c7c5c5ae8b gnu: leptonica: Disable failing tests. 
* gnu/packages/image.scm (leptonica)[arguments]: Add 'disable-failing-tests' phase.
 2015-10-28 20:48:45 +08:00
Ludovic Courtès 5c7bdc9a7f gnu: python-debian: Avoid @itemize in description. 
* gnu/packages/python.scm (python-debian): Use @enumerate instead of
  @itemize.
 2015-10-28 12:04:03 +01:00
Mark H Weaver 58301666dd gnu: grub: Install documentation. 
* gnu/packages/grub.scm (grub)[native-inputs]: Add help2man and texinfo.
 2015-10-28 12:04:03 +01:00
Mark H Weaver 04e0eac1ed gnu: grub: Use modify-phases and other minor cleanups. 
* gnu/packages/grub.scm (grub)[arguments]: Use modify-phases.  Return #t from
  'patch-stuff' phase.  Add 'patch-stuff' phase after 'unpack' instead of
  before 'patch-source-shebangs'.
  [inputs]: Add comment noting that 'fuse' would be a desirable input.
 2015-10-28 12:04:03 +01:00
Mark H Weaver 44a88ce49e gnu: linux-libre: On MIPS, the linux image name is vmlinuz, not bzImage. 
* gnu/packages/linux.scm (linux-libre)[install-phase]: Add vmlinuz to the list
  of file names to be copied.
 2015-10-28 12:04:02 +01:00
Mark H Weaver 726029b2ba gnu: linux-libre: Add case for ARCH=mips. 
* gnu/packages/linux.scm (linux-libre)[build-phase]: When setting ARCH, add a
  case for MIPS.
 2015-10-28 12:04:02 +01:00
Mark H Weaver 6c8d70b0b6 gnu: linux-libre: Add 'supported-systems' field: Intel only for now. 
* gnu/packages/linux.scm (linux-libre)[supported-systems]: New field.
 2015-10-28 12:04:02 +01:00
Mark H Weaver b1b9e5c8d2 gnu: linux-libre: Update to 4.2.5. 
* gnu/packages/linux.scm (linux-libre): Update to 4.2.5.
 2015-10-27 20:20:05 -04:00
Mark H Weaver 9f4a249611 linux-initrd: Use pata_acpi, pata_atiixp, and isci modules only on Intel. 
* gnu/system/linux-initrd.scm (base-initrd)[linux-modules]: Include
  "pata_acpi", "pata_atiixp", and "isci" on Intel systems only.
 2015-10-27 21:44:46 +01:00
Mark H Weaver 6b173ac004 system: grub: Adjust eye-candy to work on non-Intel systems. 
* gnu/system/grub.scm (eye-candy): Accept additional 'system' argument.  Add
  local 'setup-gfxterm-body' variable.  Replace the 'load_video' grub function
  with 'setup_gfxterm', which includes everything in the 'if loadfont' form on
  Intel systems, but is empty on non-Intel.
  (grub-configuration-file): Pass 'system' to 'eye-candy.
 2015-10-27 21:44:46 +01:00
Mark H Weaver c448bf7443 system: grub: On MIPS, the linux image name is vmlinuz, not bzImage. 
* gnu/system/grub.scm (grub-configuration-file): Add 'linux-image-name'
  internal procedure.  Use it from 'entry->gexp'.
 2015-10-27 21:44:46 +01:00
Ludovic Courtès 08dcff4744 gnu: Add Diffoscope. 
* gnu/packages/package-management.scm (diffoscope): New variable.
 2015-10-27 21:44:46 +01:00
Ludovic Courtès 816a653884 gnu: Add python-chardet. 
* gnu/packages/python.scm (python-chardet, python2-chardet): New
  variables.
 2015-10-27 21:44:46 +01:00
Ludovic Courtès 85d4aeacc4 gnu: Add python-debian. 
* gnu/packages/python.scm (python-debian, python2-debian): New
  variables.
 2015-10-27 21:44:46 +01:00
Andreas Enge a10d3a687d gnu: qt: Update to 5.5.1. 
* gnu/packages/qt.scm (qt): Update to 5.5.1.
 2015-10-27 21:42:55 +01:00
Ricardo Wurmus c364a287ad gnu: gcj: Run libjava tests. 
* gnu/packages/gcc.scm (gcj)[native-inputs]: Add dejagnu.
  [arguments]: Enable tests and set test target to
  "check-target-libjava".
 2015-10-27 16:03:30 +01:00
Christopher Allan Webber 9a9e143b75 gnu: guile-next: Update to 20151025.e5bccb6 
* gnu/packages/guile.scm (guile-next): Update to 20151025.e5bccb6.
 2015-10-27 09:36:23 -05:00
宋文武 bce5ae1d26 gnu: leptonica: Update to 1.72. 
* gnu/packages/image.scm (leptonica): Update to 1.72.
 2015-10-27 21:47:37 +08:00
宋文武 d8c317df26 gnu: ganv, pavucontrol, jalv: Fix build by compile with C++11. 
* gnu/packages/audio.scm (jalv)[arguments],
  gnu/packages/gtk.scm (ganv)[arguments],
  gnu/packages/music.scm (non-sequencer)[arguments],
  gnu/packages/pulseaudio.scm (pavucontrol)[arguments]: Set
  'CXXFLAGS' to '-std=c++11'.
 2015-10-27 20:32:28 +08:00
Ricardo Wurmus 104c1986ac gnu: subread: Use SSE optimizations on x86_64 only. 
* gnu/packages/bioinformatics.scm (subread)[arguments]: Override CC and
  CCFLAGS conditionally dependent on target system.
 2015-10-27 12:06:55 +01:00
Ricardo Wurmus 61d5fd03bf gnu: crossmap: Update to 0.2.1. 
* gnu/packages/bioinformatics.scm (crossmap): Update to 0.2.1.
 2015-10-27 11:14:13 +01:00
Ludovic Courtès c21317d425 gnu: mu: Adjust to new GLib version. 
* gnu/packages/mail.scm (%mu-gtester-patch): New variable.
  (mu)[source]: Use it.
 2015-10-27 10:19:46 +01:00
Ludovic Courtès ff5c33fe71 gnu: gtkmm: Add dependency on glib:bin. 
* gnu/packages/gtk.scm (gtkmm)[native-inputs]: Add glib:bin.
  (gtkmm-2)[native-inputs]: New field.
 2015-10-27 10:08:02 +01:00
Ludovic Courtès b9cbe31645 gnu: libwacom: Add dependency on libgudev. 
* gnu/packages/xdisorg.scm (libwacom)[inputs]: Add LIBGUDEV.
 2015-10-27 10:05:36 +01:00
Aljosha Papsch 7e9b07bdcb gnu: Add yapet. 
* gnu/packages/password-utils.scm (yapet): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2015-10-27 00:01:20 +01:00
Cyrill Schenkel 7dae1f4301 gnu: Add xcompmgr. 
* gnu/packages/xorg.scm (xcompmgr): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2015-10-27 00:01:20 +01:00
Ludovic Courtès 5e1c936712 gnu: Add python-file. 
* gnu/packages/python.scm (python-file, python2-file): New variables.
 2015-10-27 00:01:20 +01:00
Ludovic Courtès e3e1ecf67c gnu: Add RPM. 
* gnu/packages/package-management.scm (rpm): New variable.
* gnu/packages/backup.scm (libarchive): Add comment.
 2015-10-27 00:01:19 +01:00
Paul van der Walt 64a719203f gnu: racket: Update to 6.2.1. 
* gnu/packages/scheme.scm (racket): Update to 6.2.1.
 2015-10-26 13:28:20 +01:00
Paul van der Walt fd59d2ee65 gnu: haskell: Remove CONFIG_SHELL patches. 
A previous commit to the haskell-build-system made sure that if
necessary, the CONFIG_SHELL environment variable is set.  That obviates
the individual patches applied to some packages.  Remove them.

* gnu/packages/haskell.scm (ghc-network, ghc-old-time, ghc-sdl-image,
  ghc-sdl-mixer, ghc-sdl, ghc-unix-time, ghc-x11)[arguments]: Remove
  ‘fix-/bin/sh’ phase.
 2015-10-26 10:15:32 +01:00
Paul van der Walt 554093b7e1 gnu: ghc-async: Fix description formatting. 
* gnu/packages/haskell.scm (ghc-async): Formatting.
 2015-10-26 10:15:14 +01:00
Efraim Flashner 581176c00b gnu: youtube-dl: Upgrade to 2015.10.24. 
* gnu/packages/video.scm (youtube-dl): Upgrade to 2015.10.24.
 2015-10-25 19:07:29 +02:00
宋文武 92e4fbe215 gnu: ardour: Build with '--cxx11'. 
* gnu/packages/audio.scm (ardour, ardour-3)[arguments]: Add '--cxx11'
  as #:configure-flags.
 2015-10-25 17:40:14 +08:00
Mark H Weaver 51de92a08e gnu: unzip: Reorganize security fixes for improved clarity. 
* gnu/packages/patches/unzip-fix-overflows-and-infloop.patch: Delete
  file.  Its contents are now split into the following new files:
* gnu/packages/patches/unzip-CVE-2015-7696.patch,
  gnu/packages/patches/unzip-CVE-2015-7697.patch,
  gnu/packages/patches/unzip-overflow-on-invalid-input.patch: New files.
* gnu-system.am (dist_patch_DATA): Adjust accordingly.
* gnu/packages/zip.scm (unzip)[source]: Adjust patches accordingly.
 2015-10-23 23:12:06 -04:00
Mark H Weaver d3365d4866 Merge branch 'master' into dbus-update 2015-10-23 23:11:38 -04:00
宋文武 6e4512c470 gnu: libgnomecanvasmm: Fix build by passing '-std=c++11'. 
* gnu/packages/gnome.scm (libgnomecanvasmm)[arguments]: Pass
  '-std=c++11' as CXXFLAGS.
 2015-10-24 09:57:11 +08:00
宋文武 a2651b5477 gnu: gtk+: Remove rest from inputs. 
This broke building on mips64el.

* gnu/packages/gtk.scm (gtk+)[inputs]: Remove rest.
 2015-10-24 09:22:15 +08:00
Mark H Weaver ca9745e484 gnu: linux-libre: Update to 4.2.4. 
* gnu/packages/linux.scm (linux-libre): Update to 4.2.4.
 2015-10-23 15:34:07 -04:00
宋文武 6747de140d gnu: bluez: Update to 5.35, fix test. 
* gnu/packages/patches/bluez-tests.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (bluez): Update to 5.35.
  [source]: Add patch.
 2015-10-23 22:23:34 +08:00
Paul van der Walt aa6f39127e gnu: Add Raincat. 
* gnu/packages/games.scm (raincat): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt c783cac070 gnu: Add ghc-sdl-image. 
* gnu/packages/haskell.scm (ghc-sdl-image): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 224a0ddbd9 gnu: Add ghc-sdl-mixer. 
* gnu/packages/haskell.scm (ghc-sdl-mixer): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt b784e8c502 gnu: Add ghc-sdl. 
* gnu/packages/haskell.scm (ghc-sdl): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt bce030840d gnu: Add ghc-glut. 
* gnu/packages/haskell.scm (ghc-glut): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt fe28ba703f gnu: Add ghc-opengl. 
* gnu/packages/haskell.scm (ghc-opengl): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 74fa80ee68 gnu: Add ghc-objectname. 
* gnu/packages/haskell.scm (ghc-objectname): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 894562e314 gnu: Add ghc-gluraw. 
* gnu/packages/haskell.scm (ghc-gluraw): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt c480b85e66 gnu: Add ghc-openglraw. 
* gnu/packages/haskell.scm (ghc-openglraw): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 22db3ce71a gnu: Add ghc-half. 
* gnu/packages/haskell.scm (ghc-half): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 25d51164f7 gnu: Add ghc-regex-compat. 
* gnu/packages/haskell.scm (ghc-regex-compat): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt e422279bbc gnu: Add ghc-regex-posix. 
* gnu/packages/haskell.scm (ghc-regex-posix): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 25eb1c2227 gnu: Add ghc-xhtml. 
* gnu/packages/haskell.scm (ghc-xhtml): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt e0d17b8482 gnu: Add ghc-haskell-src. 
* gnu/packages/haskell.scm (ghc-haskell-src): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 0bc641baf8 gnu: Add ghc-html. 
* gnu/packages/haskell.scm (ghc-html): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 1f477b59c1 gnu: Add ghc-cgi. 
* gnu/packages/haskell.scm (ghc-cgi): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 5e217e4df7 gnu: Add ghc-multipart. 
* gnu/packages/haskell.scm (ghc-multipart): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt e40b25432e gnu: Add ghc-alex. 
* gnu/packages/haskell.scm (ghc-alex): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt e0492a8dd4 gnu: Add ghc-haddock. 
* gnu/packages/haskell.scm (ghc-haddock): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 735bd9c952 gnu: Add ghc-haddock-api. 
* gnu/packages/haskell.scm (ghc-haddock-api): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 56b3bc5694 gnu: Add ghc-haddock-library. 
* gnu/packages/haskell.scm (ghc-haddock-library): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 600621a182 gnu: Add Idris. 
* gnu/packages/haskell.scm (idris): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 93248cfdd0 gnu: Add ghc-trifecta. 
* gnu/packages/haskell.scm (ghc-trifecta): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt d7e67cf1a1 gnu: Add ghc-cheapskate. 
* gnu/packages/haskell.scm (ghc-cheapskate): Add variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt e1a35c39b1 gnu: Add ghc-lens. 
* gnu/packages/haskell.scm (ghc-lens): Add variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 5125f63fea gnu: Add ghc-kan-extensions. 
* gnu/packages/haskell.scm (ghc-kan-extensions): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 576cdc5ab4 gnu: Add ghc-vector-binary-instances. 
* gnu/packages/haskell.scm (ghc-vector-binary-instances): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 7588e55c73 gnu: Add ghc-wai-extra. 
* gnu/packages/haskell.scm (ghc-wai-extra): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt fc3aa91b55 gnu: Add ghc-wai-logger. 
* gnu/packages/haskell.scm (ghc-wai-logger): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 3784289667 gnu: Add ghc-wai. 
* gnu/packages/haskell.scm (ghc-wai): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 5722409b18 gnu: Add ghc-cookie. 
* gnu/packages/haskell.scm (ghc-cookie): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt e372520ec3 gnu: Add ghc-parsers. 
* gnu/packages/haskell.scm (ghc-parsers): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt d6a08d24bf gnu: Add ghc-xss-sanitize. 
* gnu/packages/haskell.scm (ghc-xss-sanitize): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt f550db48eb gnu: Add ghc-streaming-commons. 
* gnu/packages/haskell.scm (ghc-streaming-commons): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 85b2a2f541 gnu: Add ghc-resourcet. 
* gnu/packages/haskell.scm (ghc-resourcet): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 6397aef061 gnu: Add hlint. 
* gnu/packages/haskell.scm (hlint): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 6ff19687b1 gnu: Add ghc-haskell-src-exts. 
* gnu/packages/haskell.scm (ghc-haskell-src-exts): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 81da1a45e8 gnu: Add ghc-happy. 
* gnu/packages/haskell.scm (ghc-happy): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 0ba563643e gnu: Add ghc-cmdargs. 
* gnu/packages/haskell.scm (ghc-cmdargs): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 78249cc075 gnu: Add cpphs. 
* gnu/packages/haskell.scm (cpphs): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 6729152dc5 gnu: Add ghc-simple-reflect. 
* gnu/packages/haskell.scm (ghc-simple-reflect): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 52db0e1372 gnu: Add ghc-adjunctions. 
* gnu/packages/haskell.scm (ghc-adjunctions): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt dc2e8ab7ea gnu: Add ghc-free. 
* gnu/packages/haskell.scm (ghc-free): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 1e473fb8dc gnu: Add ghc-prelude-extras. 
* gnu/packages/haskell.scm (ghc-prelude-extras): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 865ac57307 gnu: Add ghc-reflection. 
* gnu/packages/haskell.scm (ghc-reflection): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt d2639cbc17 gnu: Add ghc-reducers. 
* gnu/packages/haskell.scm (ghc-reducers): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt aee9822326 gnu: Add ghc-semigroupoids. 
* gnu/packages/haskell.scm (ghc-semigroupoids): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt f221841c69 gnu: Add ghc-profunctors. 
* gnu/packages/haskell.scm (ghc-profunctors): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt fad564ec03 gnu: Add ghc-extra. 
* gnu/packages/haskell.scm (ghc-extra): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 47038762ba gnu: Add ghc-polyparse. 
* gnu/packages/haskell.scm (ghc-polyparse): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt ce78a0f50c gnu: Add HScolour. 
* gnu/packages/haskell.scm (hscolour): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 40b56b5291 gnu: Add ghc-comonad. 
* gnu/packages/haskell.scm (ghc-comonad): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt fa4f5024bc gnu: Add ghc-distributive. 
* gnu/packages/haskell.scm (ghc-distributive): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 10e614523f gnu: Add ghc-cereal. 
* gnu/packages/haskell.scm (ghc-cereal): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt ca41c155c5 gnu: Add ghc-zip-archive. 
* gnu/packages/haskell.scm (ghc-zip-archive): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 7b72df8b7a gnu: Add ghc-css-text. 
* gnu/packages/haskell.scm (ghc-css-text): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt 39505126b1 gnu: Add ghc-aeson. 
* gnu/packages/haskell.scm (ghc-aeson): New variable.
 2015-10-23 09:10:52 +02:00
Paul van der Walt bc74e0e171 gnu: Add ghc-attoparsec. 
* gnu/packages/haskell.scm (ghc-attoparsec): New variable.
 2015-10-23 09:10:52 +02:00