Commit Graph

1202 Commits

Author SHA1 Message Date
Marius Bakke d8fa1890c7
Merge branch 'master' into staging 2018-03-08 21:21:05 +01:00
Marius Bakke 5de561a796
gnu: gnome-todo: Fix compatibility with libical >= 3.0.
* gnu/packages/patches/gnome-todo-libical-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnome.scm (gnome-todo)[source](patches): Use it.
2018-03-07 15:06:22 +01:00
Julien Lepiller 41125eaff8
gnu: Add maven-resolver-api.
* gnu/packages/maven.scm: New file.
(maven-resolver-api): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-06 23:05:34 +01:00
Leo Famulari 613ef763a5
Merge branch 'master' into staging 2018-03-06 13:39:12 -05:00
Marius Bakke 5b0b520e22
gnu: ceph: Update to 12.2.4.
* gnu/packages/patches/ceph-disable-cpu-optimizations.patch: Adjust to
upstream changes.
* gnu/packages/patches/ceph-disable-unittest-throttle.patch: Delete file.
* gnu/packages/patches/ceph-rocksdb-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/storage.scm (ceph): Update to 12.2.4.
[source](patches): Adjust.
[arguments]: Add "-DWITH_BABELTRACE=OFF" in #:configure-flags.  Build with
CMAKE-3.11.  Adjust file substitutions.  Wrap 'ceph' executable.
[native-inputs]: Add GPERF.
[inputs]: Replace BOOST with BOOST-1.66.  Add PYTHON2-PRETTYTABLE.
2018-03-04 17:54:40 +01:00
Gábor Boskovits 48c8622010
gnu: antlr3-3.3: Fix java8 issue.
* gnu/packages/java.scm (antlr3-3.3)[source]: Add patch.
* gnu/packages/patches/antlr3-3_3-fix-java8-compilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2018-03-04 14:16:37 +01:00
Gábor Boskovits 4c763b4d67
gnu: antlr3-3.1: Fix java8 issue.
* gnu/packages/java.scm (antlr3-3.1)[source]: Add patch.
* gnu/packages/patches/antlr3-3_1-fix-java8-compilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2018-03-04 14:13:47 +01:00
Ricardo Wurmus fa5965990d
gnu: Add r-hpar.
* gnu/packages/bioconductor.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-02 23:24:57 +01:00
Mark H Weaver 8863f2f051
gnu: icecat: Update to 52.6.0-gnu1.
* gnu/packages/gnuzilla.scm (icecat): Update to 52.6.0-gnu1.
[source]: Remove patches that are no longer needed.
* gnu/packages/patches/icecat-bug-1348660-pt5.patch,
gnu/packages/patches/icecat-bug-1414945.patch,
gnu/packages/patches/icecat-bug-1415133.patch,
gnu/packages/patches/icecat-bug-1424373-pt2.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-03-02 01:31:19 -05:00
Julien Lepiller 8147d7c675
gnu: php: Fix test failure.
* gnu/packages/php.scm (php)[inputs]: Use gd-for-php.
(gd-for-php): New private variable.
* gnu/packages/patches/gd-CVE-2018-5711.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-03-01 22:25:28 +01:00
Ricardo Wurmus b672a81607
gnu: Graft glibc to allow execution on Linux 2.6.32.
* gnu/packages/patches/glibc-allow-kernel-2.6.32.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (glibc/linux)[replacement]: New field.
(glibc-2.26-patched): New variable.
2018-03-01 21:32:36 +01:00
Marius Bakke 86990eeda2
Merge branch 'master' into staging 2018-03-01 18:04:12 +01:00
Tobias Geerinckx-Rice 9d43579f2d
gnu: dovecot: Update to 2.3.0.1 [fixes CVE-2017-14461].
* gnu/packages/mail.scm (dovecot): Update to 2.3.0.1.
[source]: Remove upstreamed patch.
* gnu/packages/patches/dovecot-CVE-2017-15132.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-28 22:58:23 +01:00
Marius Bakke 53453d7acc
gnu: wavpack: Fix CVE-2018-6767.
* gnu/packages/patches/wavpack-CVE-2018-6767.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/audio.scm (wavpack)[source](patches): Add it.
2018-02-28 20:29:46 +01:00
Marius Bakke b39667cdcb
gnu: python-mox3: Update to 0.24.0.
* gnu/packages/openstack.scm (python-mox3): Update to 0.24.0.
[source](patches): New field.
[arguments]: Remove.
[native-inputs]: Add PYTHON-OPENSTACKDOCSTHEME and PYTHON-SUBUNIT.  Replace
PYTHON-SPHINX with PYTHON-SPHINX-1.6.  Move PYTHON-PBR and PYTHON-FIXTURES ...
[propagated-inputs]: ... here.  New field.
[description]: Don't mention explicit Python versions.
* gnu/packages/patches/python-mox3-python3.6-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-02-28 13:59:00 +01:00
Tobias Geerinckx-Rice 1143450c14
gnu: dblatex: Update to 0.3.10.
* gnu/packages/docbook.scm (dblatex): Update to 0.3.10.
[source]: Remove patch.
* gnu/packages/patches/dblatex-remove-multirow.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-28 04:13:19 +01:00
Oleg Pykhalov e1cf4fd2d2
services: cgit: Add more configuration fields.
* gnu/services/version-control.scm (cgit-service-type): Move to separate file.
* gnu/services/cgit.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add this.
* gnu/tests/version-control.scm: Add this.
* doc/guix.texi (Cgit Service): Document this.
2018-02-28 04:40:56 +03:00
Tobias Geerinckx-Rice d5d7d26df7
gnu: perl-gd: Update to 2.68.
* gnu/packages/gd.scm (perl-gd): Update to 2.68.
[source]: Remove obsolete patch.
[native-inputs]: Remove perl-module-build.
[inputs]: Use canonical package names and order alphabetically.
[arguments]: Replace #:module-build-flags with fewer #:make-maker-flags,
enable #:tests?, and remove ‘clear-autogenerated-files’ phase.
* gnu/packages/patches/perl-gd-options-passthrough-and-fontconfig.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-27 16:49:58 +01:00
Marius Bakke 2115bde302
gnu: python-parse: Update to 1.8.2.
* gnu/packages/patches/python-parse-too-many-fields.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/python.scm (python-parse): Update to 1.8.2.
[source](patches): Remove.
[arguments]: Use INVOKE instead of SYSTEM*.
2018-02-26 02:39:15 +01:00
Alex ter Weele f61682e7ea
gnu: Add agda.
* gnu/packages/agda.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add adga.scm.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-02-26 01:42:35 +01:00
Marius Bakke 5697897537
gnu: json-glib: Fix 32-bit test failures.
* gnu/packages/patches/json-glib-fix-tests-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnome.scm (json-glib)[source](patches): New field.
2018-02-25 04:28:21 +01:00
Kei Kebreau 0181df537f
gnu: wxmaxima: Update to 18.02.0.
* gnu/packages/maths.scm (wxmaxima): Update to 18.02.0.
[source]: Add patch.
[build-system]: Use the cmake-build-system.
[native-inputs]: Remove autoconf and automake.
[arguments]: Disable tests, remove 'autoconf' phase.
* gnu/packages/patches/wxmaxima-do-not-use-old-gnuplot-parameters.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-24 18:05:52 -05:00
Marius Bakke 5f9b018aa8
Merge branch 'master' into staging 2018-02-24 19:04:13 +01:00
Oleg Pykhalov d5ee4342c0
gnu: Add perl-regexp-pattern-license.
* gnu/packages/license.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add this.
2018-02-24 20:01:29 +03:00
Clément Lassieur 60628f5452
gnu: password-store: Fix compatibility with GnuPG 2.2.5.
* gnu/packages/patches/password-store-gnupg-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/password-utils.scm (password-store)[source]: Use it.
2018-02-24 12:57:39 +01:00
Marius Bakke 65f704f373
gnu: wavpack: Fix CVE-2018-7253 and CVE-2018-7254.
* gnu/packages/patches/wavpack-CVE-2018-7253.patch,
gnu/packages/patches/wavpack-CVE-2018-7254.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
* gnu/packages/audio.scm (wavpack)[source](patches): Use them.
2018-02-23 20:40:51 +01:00
Tobias Geerinckx-Rice bbf8832f16
gnu: optipng: Update to 0.7.7 [security fixes].
This release claims to fix 2 vulnerabilities:
- ‘an integer overflow vulnerability in the TIFF decoder’
  (CVE-2017-1000229, previously patched in Guix), and
- ‘a buffer overflow vulnerability in the GIF decoder’.

* gnu/packages/image.scm (optipng): Update to 0.7.7.
[source]: Remove patch.
[arguments]: Substitute INVOKE for SYSTEM* and end phase with #t.
* gnu/packages/patches/optipng-CVE-2017-1000229.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-23 16:00:04 +01:00
Rutger Helling 6352e99437
gnu/local.mk: Add emulators.scm.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add emulators.scm.
2018-02-22 09:16:19 +01:00
Tobias Geerinckx-Rice 79f0561f43
gnu: htop: Fix tree view.
* gnu/packages/patches/htop-fix-process-tree.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (htop)[source]: Use it.
2018-02-21 15:02:49 +01:00
Pjotr Prins 1b541c3e93
gnu: ldc: Update to 1.7.0.
Fixes recent bootstrap and updates ldc and package manager to match.

* gnu/packages/ldc.scm (ldc-bootstrap): Update to 0.17.4.
[properties]: Add max-slient-time.
[arguments]<#:phases>[patch-phobos]: Update patches (see below).
(ldc): Update to 1.7.0.
(ldc-beta): Delete variable.
[arguments]<#:phases>[patch-phobos]: Update patches (see below).
[arguments]<#:phases>[check]: Use invoke.
(rdmd): Update to 2.077.1.
(dub): Update to 1.7.2.
* gnu/local.mk (dist_patch_DATA): Remove "ldc-disable-tests.patch".
Add "ldc-bootstrap-disable-tests.patch".
Remove "ldc-1.1.0-disable-phobos-tests.patch".
Add "ldc-1.7.0-disable-phobos-tests.patch".
Remove "ldc-1.1.0-disable-dmd-tests.patch".

Co-Authored-By: Danny Milosavljevic <dannym@scratchpost.org>
2018-02-20 19:36:34 +01:00
Marius Bakke 5fa6b52a54
gnu: qemu: Update to 2.11.1.
* gnu/packages/patches/qemu-CVE-2017-15038.patch,
gnu/packages/patches/qemu-CVE-2017-15289.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/virtualization.scm (qemu): Update to 2.11.1
[source](patches): Remove.
2018-02-20 17:44:43 +01:00
Marius Bakke 7f69459aca
Merge branch 'master' into staging 2018-02-20 17:36:56 +01:00
Marius Bakke b1989c1250
gnu: freetype: Fix CVE-2018-6942.
* gnu/packages/patches/freetype-CVE-2018-6942.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/fontutils.scm (freetype)[replacement]: New field.
(freetype/fixed): New variable.
2018-02-20 16:26:20 +01:00
Marius Bakke f55ef78b5c
gnu: gtk+@2: Update to 2.24.32.
* gnu/packages/patches/gtk2-fix-failing-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gtk.scm (gtk+-2): Update to 2.24.32.
[source]: Remove 'gtk2-fix-failing-test.patch'.
2018-02-20 14:55:58 +01:00
okapi 2922852e86
gnu: Add gzdoom.
* gnu/packages/games.scm (gzdoom): New variable.
* gnu/packages/patches/gzdoom-search-in-installed-share.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-02-19 00:33:34 +01:00
Hartmut Goebel 431ff8bea3
gnu: kde-frameworks: Update to 5.42.0 resp. 5.42.1
Beside simple updating:
- Change all todo-comments for test-cases into "fixme" comments to make them
  easier to find.
- breeze-icons: Blacklist a test failing at build.kde.org, too.
- extra-cmake-modules: Patch out a vanised test-case.
- kfilemetadata: Can now run the test-suite uninstalled. Blacklist a failing
  test-case.
- kimageformats: No longer symlink plugins into ./bin for testing.
- ktexteditor: Remove now unused patch.
- plasma-framework: Add input kirigami
- sonnet: For testing set QT_QPA_PLATFORM=offscreen.

* gnu/packages/kde-frameworks.scm (attica, baloo, bluez-qt, kactivities,
  kactivities-stats, kapidox, karchive, kauth, kbookmarks, kcmutils, kcodecs,
  kcompletion, kconfig, kconfigwidgets, kcoreaddons, kcrash, kdbusaddons,
  kde-frameworkintegration, kdeclarative, kded, kdelibs4support,
  kdesignerplugin, kdesu, kdewebkit, kdnssd, kdoctools, kemoticons,
  kglobalaccel, kguiaddons, khtml, ki18n, kiconthemes, kidletime, kinit, kio,
  kirigami, kitemmodels, kitemviews, kjobwidgets, kjs, kjsembed, kmediaplayer,
  knewstuff, knotifications, knotifyconfig, kpackage, kparts, kpeople,
  kplotting, kpty, kross, krunner, kservice, ksyntaxhighlighting,
  ktextwidgets, kunitconversion, kwallet, kwayland, kwindowsystem, kxmlgui,
  kxmlrpcclient, modemmanager-qt, networkmanager-qt, oxygen-icons,
  prison, solid, threadweaver): Update to 5.42.0.
  (kwidgetsaddons): Update to 5.42.1.
  (breeze-icons): Update to 5.42.0. [#:phases]<disable-failing-test> New
  phase.
  (extra-cmake-modules): Update to 5.42.0.
  [#:phases]<post-5.42.0-release-fix>: New phase.
  (kfilemetadata): Update to 5.42.0. [#:phases]: No longer move check behind
  install. [#:phases]<check-setup> Remove. [#:phase]<disable-failing-test> New
  phase.
  (kimageformats): Update to 5.42.0. [#:phases]<check-setup>: No longer
  symlink plugins into ./bin.
  (ktesteditor)[source]: Remove patch.
  (plasma-framework)[inputs]: Add  kirigami
  (sonnet): Update to 5.42.0. [#:phases]<check-setup> New phase.
* gnu/packages/patches/ktexteditor-5.39.0-autotests-dependencies.patch:
  Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-18 19:21:35 +01:00
Hartmut Goebel 64f390a409
gnu: qtbase: Use the store paths for other packages and dynamically loaded libs.
Transfer the applicable NixOS patches as of 2018-01-19:

- Not adopted: We don't change the .cmake.in and .prf, but use config
  mechanisms provided by th Qt build system.

- src/corelib/tools/qtimezoneprivate_tz.cpp: Adopted patch: Use $TZDIR to
  search for time-zone data. Thus avoid depending on package "tzdata", which
  often introduces changes with near-immediate effects, so it's important to
  be able to update it fast.

- src/corelib/kernel/qcoreapplication.cpp: Not adopted: NixOS adds plugin
  paths derived from PATH. We do not need this, since we already have
  native-search-path QT_PLUGIN_PATH.

- src/network/kernel/qdnslookup_unix.cpp,
  src/network/kernel/qhostinfo_unix.cpp: Transferred: Use hard-coded path to
  libresolv.

- src/network/ssl/qsslcontext_openssl.cpp: Not adopted: NixOS changes a
  conditional compilation for Qt 5.9 (but leaves it unchanged for Qt 5.10) to
  fix compilation with libressl.  But Qt does not support libressl anway, see
  config.tests/openssl/openssl.cpp in qtbase 5.9.4.

- src/plugins/platforminputcontexts/compose/generator/qtablegenerator.cpp:
  Transferred: Use hard-coded path to libx11.

- src/plugins/platforms/xcb/gl_integrations/xcb_glx/qglxintegration.cpp:
  Transferred: Use hard-coded path to mess's libGL, no need for a fall-back.

- src/plugins/platforms/xcb/qxcbcursor.cpp: Transferred: Use hard-coded path
  to Xcursor.

- src/plugins/platformthemes/gtk3/main.cpp: Not adopted: NixOS changes
  $XDG_DATA_DIRS and $GIO_EXTRA_MODULES in the code. We already have a
  search-path-specification for this.

- src/testlib/qtestassert.h: Decided not to adopt this for guix.

* gnu/packages/patches/qtbase-use-TZDIR.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qt.scm (qtbase): Add comment. [source]: Use new patch.
  [arguments]<#:phases>'patch-paths': New phase.
2018-02-18 18:39:18 +01:00
Ludovic Courtès 3f3c0ab434
gnu: mailutils: Fix uninitialized memory bug.
This was causing segfaults in the MH test suite when building with
glibc 2.26 on x86_64.

* gnu/packages/patches/mailutils-uninitialized-memory.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mail.scm (mailutils)[source](patches, snippet): New
fields.
[native-inputs]: New field.
2018-02-18 00:48:17 +01:00
Ludovic Courtès d65930708f
gnu: gcc@4.9: Fix libsanitizer compilation with glibc 2.26.
* gnu/packages/patches/gcc-4.9-libsanitizer-fix.patch: New file.
* gnu/packages/gcc.scm (gcc-4.9)[source](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-18 00:48:16 +01:00
Ricardo Wurmus ff9d1a2f0c
Merge branch 'master' into core-updates 2018-02-18 00:39:25 +01:00
Marius Bakke 26176bee23
gnu: python-waitress: Update to 1.1.0.
* gnu/packages/patches/python-waitress-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-waitress): Update to 1.1.0.
[source](patches): New field.
2018-02-17 20:49:39 +01:00
Ben Woodcroft bb3359ab8e
gnu: ruby-2.4.3: Update rubygems to 2.7.6.
This fixes the security issues described at
https://www.ruby-lang.org/en/news/2018/02/17/multiple-vulnerabilities-in-
rubygems/

* gnu/packages/patches/ruby-rubygems-276-for-ruby24.patch: New file.
* gnu/packages/ruby.scm (ruby-2.4.3)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-18 00:48:50 +10:00
Mark H Weaver 150062f190
Merge branch 'master' into core-updates 2018-02-16 13:14:26 -05:00
Danny Milosavljevic f6cccefed5
gnu: ghc: Make memory allocator decommit memory on Linux < 4.5.
* gnu/packages/patches/ghc-8.0-fall-back-to-madv_dontneed.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/haskell.scm (ghc-8): Use it.
2018-02-16 12:41:01 -05:00
Danny Milosavljevic a124e4258a
gnu: ghc: Make memory allocator decommit memory on Linux < 4.5.
* gnu/packages/patches/ghc-8.0-fall-back-to-madv_dontneed.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/haskell.scm (ghc-8): Use it.
2018-02-15 17:27:50 +01:00
Pierre Langlois 6ca15c9ef6
gnu: crypto++: Update to 6.0.0.
* gnu/packages/crypto.scm (crypto++): Update to 6.0.0.
* gnu/packages/patches/crypto++-fix-dos-in-asn.1-decoders.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-02-15 10:23:42 +01:00
Mark H Weaver 02843215d8
gnu: shepherd: 'herd status' now sorts the result.
Add a patch by Ludovic Courtès <ludo@gnu.org> from the upstream
shepherd repository to partially fix <https://bugs.gnu.org/30299>.

* gnu/packages/patches/shepherd-herd-status-sorted.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (shepherd)[source]: Add patch.
2018-02-14 03:42:02 -05:00
Mark H Weaver 288b8fd5e9
Merge branch 'master' into core-updates 2018-02-13 13:17:15 -05:00
Rutger Helling 6963305ce5
gnu: local.mk: Remove mpv patch lines.
* gnu/local.mk: Remove mpv CVE-2018-6360 patch lines.
2018-02-13 10:35:00 +01:00
Mark H Weaver a7fb298665
Merge branch 'master' into core-updates 2018-02-11 04:05:07 -05:00