e9d60ebadb
gnu: octave: Update to 4.2.1.
...
* gnu/packages/maths.scm (octave): Update to 4.2.1.
2017-03-01 11:33:08 +02:00
a995251d68
gnu: wxmaxima: Downgrade to 16.04.2.
...
* gnu/packages/maths.scm (wxmaxima): Do it.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-02-28 11:22:13 -05:00
cbfbcb2105
gnu: coda: Update to 2.18.
...
* gnu/packages/python.scm (coda): Update to 2.18.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-02-27 14:55:25 +01:00
1f45f18abe
installer: Aris: update synopis and description.
...
* gnu/packages/maths.scm (aris): Use the synopsis and description from the
web page instead of the README file.
2017-02-17 18:52:24 +01:00
193abc8232
gnu: Add aris.
...
* gnu/packages/maths.scm(aris): New variable.
2017-02-17 18:33:24 +01:00
29da15738c
gnu: wxmaxima: Update to 16.12.2.
...
* gnu/packages/maths.scm (wxmaxima): Update to 16.12.2.
2017-02-10 11:02:10 -05:00
4554813936
gnu: gmsh: Propagate opencascade-oce.
...
* gnu/packages/maths.scm (gmsh)[propagated-inputs]: Add opencascade-oce.
[arguments]: Remove #:phases parameter for component8_in_a_box test
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-02-09 19:19:06 +01:00
182dde82ed
gnu: cddlib: Fix source URI.
...
* gnu/packages/maths.scm (cddlib)[source]: Update source URI.
2017-02-04 15:26:26 +10:00
c000b6b10f
gnu: reducelcs: Fix license.
...
* gnu/packages/maths.scm (reducelcs)[license]: Change to GPL3+.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-02-01 19:51:36 -05:00
8a4d14fa71
gnu: gmsh: Update to 2.16.0
...
* gnu/packages/maths.scm (gmsh): Update to 2.16.0
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-01-31 17:55:50 +01:00
54052a54c1
gnu: Add reducelcs.
...
* gnu/packages/maths.scm (reducelcs): New variable.
Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2017-01-30 07:46:28 -05:00
5d4bd4cce1
gnu: Add opencascade-oce.
...
* gnu/packages/maths.scm (opencascade-oce): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-01-30 10:52:45 +01:00
82110ef658
gnu: glpk: Update to 4.61.
...
* gnu/packages/maths.scm (glpk): Update to 4.61.
[home-page]: Use HTTPS.
2017-01-23 18:54:27 +01:00
7bbf2e39f7
gnu: hdf4: Update to 4.2.12.
...
* gnu/packages/maths.scm (hdf4): Update to 4.2.12.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-09 15:55:57 +01:00
a8e45b3240
gnu: r-rcpparmadillo: Update to 0.7.600.1.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.600.1.0.
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to
7.600.1.
2016-12-29 21:49:12 +01:00
b1c1f4d012
gnu: armadillo: Update to 7.600.2.
...
* gnu/packages/maths.scm (armadillo): Update to 7.600.2.
2016-12-29 21:49:12 +01:00
db82557013
gnu: netcdf: Enable HDF4 support.
...
* gnu/packages/maths.scm (netcdf)[inputs]: Add hdf4-alt and libjpeg.
[arguments]: Add "--enable-hdf4" configure flag.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-24 14:41:50 +01:00
5f80054053
gnu: gnuplot: Update to 5.0.5.
...
* gnu/packages/maths.scm (gnuplot): Update to 5.0.5.
2016-12-18 23:27:43 -05:00
5a2604bfb6
gnu: wxmaxima: Update to 16.12.0.
...
* gnu/packages/maths.scm (wxmaxima): Update to 16.12.0.
2016-12-18 14:05:40 -05:00
4a652c78d4
gnu: maxima: Update to 5.39.0.
...
* gnu/packages/maths.scm (maxima): Update to 5.39.0.
2016-12-18 12:57:09 -05:00
bea3cf4b90
gnu: gsl: Update to 2.3.
...
* gnu/packages/maths.scm (gsl): Update to 2.3.
2016-12-12 22:08:45 +01:00
f81c6a4932
gnu: gmsh: Update to 2.15.0.
...
* gnu/packages/maths.scm (gmsh): Update to 2.15.0.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-09 19:14:21 +01:00
a4b0bfb195
gnu: netcdf: Upgrade to 4.4.1.1.
...
* gnu/packages/maths.scm (netcdf, netcdf-parallel-openmpi): Upgrade to
4.4.1.1.
[source]: Adjust patch name, add netcdf-tst_h_par.patch
* gnu/packages/patches/netcdf-config.date.patch: Rename to...
* gnu/packages/patches/netcdf-date-time.patch: ...this. Adjust for
latest source.
* gnu/packages/patches/netcdf-tst_h_par.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Adjust patches.
2016-12-01 23:50:09 -06:00
dcd9d1637a
gnu: hdf5: Update to 1.8.18 [fixes CVE-2016-{4330,4331,4332,4333}].
...
* gnu/packages/maths.scm (hdf5): Update to 1.8.18.
[source]: Add alternate URL.
2016-11-30 11:16:18 -05:00
62126576fc
gnu: hdf5: Build the C++ interface.
...
* gnu/packages/maths.scm (hdf5)[arguments]: Add #:configure-flags.
2016-11-24 21:43:47 +01:00
daf72603eb
gnu: Remove redundancy where mkdir-p <dir> is followed by install-file <file> <dir>.
...
* gnu/packages/bioinformatics.scm (bwa)[arguments]: Remove redundant mkdir-p.
(eigensoft)[arguments]: Likewise.
(snap-aligner)[arguments]: Likewise.
(pardre)[arguments]: Likewise.
(piranha)[arguments]: Likewise.
* gnu/packages/maths.scm (hypre)[arguments]: Likewise.
* gnu/packages/mp3.scm (mpc123)[arguments]: Likewise.
* gnu/packages/music.scm (tuxguitar)[arguments]: Likewise.
* gnu/packages/pdf.scm (impressive)[arguments]: Likewise.
* gnu/packages/qemu.scm (qemu)[arguments]: Likewise.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-21 14:39:54 -05:00
f5a077b10f
gnu: octave: Update to 4.2.0.
...
* gnu/packages/maths.scm (octave): Update to 4.2.0.
[native-inputs]: Add lzip.
[home-page]: Use https.
2016-11-15 15:21:15 +02:00
2cab1dd58b
Merge branch 'core-updates'
2016-11-13 00:34:16 +01:00
1c79e0861a
gnu: gmsh: Update to 2.14.1
...
* gnu/packages/maths.scm (gmsh): Update to 2.14.1.
[source]: Use new uri.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-11-10 18:57:57 +02:00
8b6ad165d1
Merge branch 'master' into core-updates
2016-11-06 03:29:06 -05:00
ccbc575824
gnu: maxima: Update to 5.38.1.
...
* gnu/packages/maths.scm (maxima): Update to 5.38.1.
2016-11-03 16:14:05 -04:00
062c7e43ed
Merge branch 'master' into core-updates
2016-10-29 21:44:44 -04:00
fba78d18c2
gnu: mumps: Upgrade to 5.0.2.
...
* gnu/packages/maths.scm (mumps): Upgrade to 5.0.2.
[arguments]: Properly return boolean from install phase.
2016-10-28 15:53:32 -05:00
02c73adcdf
Merge branch 'master' into core-updates
2016-10-26 19:00:06 -04:00
062737a178
gnu: r-rcpparmadillo: Update to 0.7.500.0.0.
...
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to
7.500.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.500.0.0.
2016-10-26 16:23:25 +02:00
7397cd9e3f
gnu: armadillo: Update to 7.500.0.
...
* gnu/packages/maths.scm (armadillo): Update to 7.500.0.
2016-10-26 16:23:25 +02:00
4b12fe5cab
gnu: coda: Remove bundled libraries.
...
* gnu/packages/maths.scm (coda): Remove bundled libraries.
[source]: Add patch and snippet to remove bundled zlib, pcre and expat.
[inputs]: Add system zlib, pcre and expat.
* gnu/packages/patches/coda-use-system-libs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-10-25 14:56:37 +02:00
d91025e3d0
gnu: Add coda.
...
* gnu/packages/maths.scm (coda): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-10-24 23:14:52 +02:00
d3c4f3bb00
gnu: Add hdf-eos2.
...
* gnu/packages/maths.scm (hdf-eos2): New variable.
* gnu/packages/patches/hdf-eos2-build-shared.patch: New file.
* gnu/packages/patches/hdf-eos2-remove-gctp.patch: New file.
* gnu/packages/patches/hdf-eos2-fortrantests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patches.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-10-24 23:05:20 +02:00
d2478b4cdd
Merge branch 'master' into core-updates
2016-10-19 10:54:36 -04:00
15ca49b220
gnu: hdf4: Really fix non-x86 architectures.
...
This is a follow-up to commit 60da9fb110
2016-10-18 21:15:43 +02:00
061d7f3bd2
Merge branch 'master' into core-updates
2016-10-13 05:53:07 -04:00
becbbefc9b
gnu: Add hdf4
...
* gnu/packages/maths.scm (hdf4, hdf4-alt): New variables.
* gnu/packages/patches/hdf4-reproducibility.patch: New file.
* gnu/packages/patches/hdf4-shared-fortran.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patches.
Co-Authored-By: Jeremy Robst <jpro@bas.ac.uk>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-10-12 23:35:43 +02:00
abcf4858cd
Merge branch 'master' into core-updates
2016-10-12 09:28:14 -04:00
0f43f8354c
gnu: Add hdf-eos5.
...
* gnu/packages/maths.scm (hdf-eos5): New variable.
* gnu/packages/patches/hdf-eos5-build-shared.patch: New file.
* gnu/packages/patches/hdf-eos5-remove-gctp.patch: New file.
* gnu/packages/patches/hdf-eos5-fix-szip.patch: New file.
* gnu/packages/patches/hdf-eos5-fortrantests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patches.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-10-06 18:14:45 +02:00
b19c7989b7
Merge branch 'master' into core-updates
2016-10-05 19:15:25 -04:00
517318adf0
gnu: Add Vc.
...
* gnu/packages/maths.scm (vc): New variable.
2016-10-05 12:49:41 -04:00
ab2cc5cde1
gnu: gsl: Disable failing tests on i686.
...
* gnu/packages/patches/gsl-test-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (gsl)[source](patches): New field.
2016-10-05 15:11:08 +02:00
8c82e1c9d3
gnu: gsl: Update to 2.2.1.
...
* gnu/packages/maths.scm (gsl): Update to 2.2.1.
2016-10-04 16:37:59 +02:00
0f7cd95b81
gnu: gctp: 'license' field now has a <license> value.
...
* gnu/packages/maths.scm (gctp)[license]: Change to a <license> record.
2016-10-03 23:20:23 +02:00
79355ae3e8
Merge branch 'master' into core-updates
2016-09-30 12:05:27 +02:00
b94a6ca074
gnu: Add and use gettext-minimal.
...
* gnu/packages/gettext.scm (gnu-gettext): Rename to...
(gettext-minimal): ... this. Adjust synopsis and description.
(gnu-gettext): Inherit from it.
(po4a): Use 'gettext-minimal' instead of 'gnu-gettext'.
* gnu/packages/acl.scm: Likewise.
* gnu/packages/admin.scm: Likewise.
* gnu/packages/apl.scm: Likewise.
* gnu/packages/attr.scm: Likewise.
* gnu/packages/audio.scm: Likewise.
* gnu/packages/base.scm: Likewise.
* gnu/packages/cdrom.scm: Likewise.
* gnu/packages/commencement.scm: Likewise.
* gnu/packages/crypto.scm: Likewise.
* gnu/packages/databases.scm: Likewise.
* gnu/packages/disk.scm: Likewise.
* gnu/packages/documentation.scm: Likewise.
* gnu/packages/education.scm: Likewise.
* gnu/packages/engineering.scm: Likewise.
* gnu/packages/enlightenment.scm: Likewise.
* gnu/packages/fcitx.scm: Likewise.
* gnu/packages/fontutils.scm: Likewise.
* gnu/packages/freedesktop.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/gkrellm.scm: Likewise.
* gnu/packages/glib.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/grub.scm: Likewise.
* gnu/packages/gtk.scm: Likewise.
* gnu/packages/guile.scm: Likewise.
* gnu/packages/ibus.scm: Likewise.
* gnu/packages/irc.scm: Likewise.
* gnu/packages/iso-codes.scm: Likewise.
* gnu/packages/kde-frameworks.scm: Likewise.
* gnu/packages/kodi.scm: Likewise.
* gnu/packages/linux.scm: Likewise.
* gnu/packages/man.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/mono.scm: Likewise.
* gnu/packages/mp3.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/nano.scm: Likewise.
* gnu/packages/networking.scm: Likewise.
* gnu/packages/package-management.scm: Likewise.
* gnu/packages/pdf.scm: Likewise.
* gnu/packages/sawfish.scm: Likewise.
* gnu/packages/statistics.scm: Likewise.
* gnu/packages/terminals.scm: Likewise.
* gnu/packages/version-control.scm: Likewise.
* gnu/packages/vpn.scm: Likewise.
* gnu/packages/w3m.scm: Likewise.
* gnu/packages/webkit.scm: Likewise.
* gnu/packages/wicd.scm: Likewise.
* gnu/packages/wine.scm: Likewise.
* gnu/packages/xdisorg.scm: Likewise.
* gnu/packages/xorg.scm: Likewise.
2016-09-28 17:54:50 +03:00
32f70e1f86
gnu: Add gctp.
...
* gnu/packages/maths.scm (gctp): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-09-27 13:37:46 -04:00
538c0e3b69
gnu: openlibm: Remove support for mips.
...
* gnu/packages/maths.scm (openlibm)[supported-systems]: New field,
remove support for mips64el.
2016-09-21 22:36:52 +03:00
883d0a7d25
gnu: openblas: Update to 0.2.19.
...
* gnu/packages/maths.scm (openblas): Update to 0.2.19.
2016-09-13 00:50:13 -04:00
5e67507273
gnu: r-rcpparmadillo: Update to 0.7.400.2.0.
...
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 7.400.2.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.400.2.0.
2016-09-12 17:44:47 +02:00
ccd9b1511e
gnu: r-pracma: Update to 1.9.5.
...
* gnu/packages/maths.scm (r-pracma): Update to 1.9.5.
[propagated-inputs]: Add "r-quadprog".
2016-09-12 17:44:40 +02:00
2d047896f9
gnu: Add r-quadprog.
...
* gnu/packages/maths.scm (r-quadprog): New variable.
2016-09-12 17:44:40 +02:00
bb76ef9d8b
Revert "gnu: gsl: Update to 2.2."
...
This reverts commit b16b16e6c2
2016-09-01 20:17:01 -04:00
b16b16e6c2
gnu: gsl: Update to 2.2.
...
* gnu/packages/maths.scm (gsl): Update to 2.2.
2016-08-30 08:39:09 +03:00
b3d2be945d
Merge remote-tracking branch 'origin/master' into core-updates
2016-08-29 23:46:33 +03:00
aa127019b5
gnu: octave: Update to 4.0.3.
...
* gnu/packages/maths.scm (octave): Update to 4.0.3.
[inputs]: Remove unnecessary curl, cyrus-sasl and openssl dependencies.
2016-08-27 08:04:21 +02:00
3c98ac0240
gnu: atlas: Update to 3.10.3.
...
* gnu/packages/maths.scm (atlas): Update to 3.10.3.
2016-08-22 10:56:03 +03:00
e5b4b96b8c
gnu: atlas: Use 'modify-phases'.
...
* gnu/packages/maths.scm (atlas)[arguments]: Use 'modify-phases'.
2016-08-19 17:41:09 +03:00
e04ae27bcf
gnu: openblas: Update to 0.2.18.
...
* gnu/packages/maths.scm (openblas): Update to 0.2.18.
2016-08-14 17:35:32 +02:00
536fc5f8cd
Merge branch 'core-updates'
2016-08-04 08:17:05 -04:00
0832787e5c
Revert "Merge branch 'core-updates'"
...
This reverts commit 455859a50f
2016-08-04 08:16:38 -04:00
b7194849ad
Rename references to (gnu packages tcsh).
...
* gnu/packages/algebra.scm, gnu/packages/boost.scm,
gnu/packages/maths.scm, gnu/packages/tex.scm, gnu/packages/vim.scm:
Change broken references to module (gnu packages tcsh) to (gnu packages
shells).
2016-08-03 16:22:31 +02:00
455859a50f
Merge branch 'core-updates'
2016-08-01 23:30:52 +02:00
3d337bbc39
Merge branch 'master' into core-updates
2016-07-31 23:27:03 -04:00
5e74529271
gnu: units: Update to 2.13.
...
* gnu/packages/maths.scm (units): Update to 2.13.
2016-08-01 01:11:57 +02:00
101e847294
gnu: dealii: Update to 8.4.1.
...
* gnu/packages/maths.scm (dealii): Update to 8.4.1.
* gnu/packages/patches/dealii-p4est-interface.patch: Remove file.
2016-07-31 15:22:41 +02:00
0bab3af078
Merge branch 'master' into core-updates
2016-07-29 14:18:07 -04:00
a3947cb1b8
gnu: Sync GNU descriptions with upstream.
...
From 'guix lint -c gnu-description'.
* gnu/packages/gnunet.scm (gnunet): Adjust description.
* gnu/packages/marst.scm (marst): Likewise.
* gnu/packages/maths.scm (c-graph): Likewise.
* gnu/packages/networking.scm (macchanger): Likewise.
2016-07-29 10:13:12 +02:00
5dbfbef729
gnu: lpsolve: Fix compilation issue.
...
Reported by Andreas Enge <andreas@enge.fr>
at <https://lists.gnu.org/archive/html/guix-devel/2016-07/msg01018.html >.
* gnu/packages/maths.scm (lpsolve)[source]: Augment 'snippet'.
2016-07-26 00:43:52 +02:00
6689d09457
gnu: lpsolve: Fail as early as possible.
...
* gnu/packages/maths.scm (lpsolve)[arguments]: In 'build' phase, check
the return value of 'system*' and honor it.
2016-07-26 00:43:52 +02:00
430e67a459
gnu: gnuplot: Update to upstream's re-release of 5.0.4.
...
* gnu/packages/maths.scm (gnuplot): Add a guix revision number to the
version scheme of gnuplot to force an update.
2016-07-22 18:24:22 +03:00
d7cff656df
gnu: muparser: Update source URL.
...
* gnu/packages/maths.scm (muparser)[source]: Update source URL to new location.
Use URL-FETCH instead of SVN-FETCH. Update hash and package revision.
2016-07-21 18:25:20 -04:00
de67e92288
gnu: Update URLs for sourceforge.net.
...
* gnu/packages/admin.scm: Update URLs pointing to sourceforge.net.
* gnu/packages/audacity.scm: Likewise.
* gnu/packages/audio.scm: Likewise.
* gnu/packages/bioinformatics.scm: Likewise.
* gnu/packages/boost.scm: Likewise.
* gnu/packages/cdrom.scm: Likewise.
* gnu/packages/code.scm: Likewise.
* gnu/packages/compression.scm: Likewise.
* gnu/packages/cups.scm: Likewise.
* gnu/packages/djvu.scm: Likewise.
* gnu/packages/docbook.scm: Likewise.
* gnu/packages/documentation.scm: Likewise.
* gnu/packages/flashing-tools.scm: Likewise.
* gnu/packages/fonts.scm: Likewise.
* gnu/packages/fontutils.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/ghostscript.scm: Likewise.
* gnu/packages/gl.scm: Likewise.
* gnu/packages/gnucash.scm: Likewise.
* gnu/packages/graphviz.scm: Likewise.
* gnu/packages/image.scm: Likewise.
* gnu/packages/libreoffice.scm: Likewise.
* gnu/packages/libusb.scm: Likewise.
* gnu/packages/linux.scm: Likewise.
* gnu/packages/lirc.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/mcrypt.scm: Likewise.
* gnu/packages/mp3.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/networking.scm: Likewise.
* gnu/packages/onc-rpc.scm: Likewise.
* gnu/packages/password-utils.scm: Likewise.
* gnu/packages/pdf.scm: Likewise.
* gnu/packages/perl.scm: Likewise.
* gnu/packages/photo.scm: Likewise.
* gnu/packages/popt.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/rdesktop.scm: Likewise.
* gnu/packages/screen.scm: Likewise.
* gnu/packages/swig.scm: Likewise.
* gnu/packages/tcl.scm: Likewise.
* gnu/packages/version-control.scm: Likewise.
* gnu/packages/video.scm: Likewise.
* gnu/packages/w3m.scm: Likewise.
* gnu/packages/web.scm: Likewise.
* gnu/packages/wm.scm: Likewise.
* gnu/packages/xdisorg.scm: Likewise.
* gnu/packages/xml.scm: Likewise.
2016-07-21 18:09:40 -04:00
a9c64810cd
gnu: gnuplot: Update to 5.0.4.
...
* gnu/packages/maths.scm (gnuplot): Update to 5.0.4.
2016-07-21 13:56:51 +03:00
2908087013
gnu: superlu-dist: Remove non-free source.
...
* gnu/packages/maths.scm (superlu-dist)[source]: Replace non-free
mc64ad.c source with stub.
2016-07-20 21:16:25 -05:00
8787c555d9
gnu: slepc: Update to 3.7.1.
...
* gnu/packages/maths.scm (slepc): Update to 3.7.1.
2016-07-20 21:16:25 -05:00
fafd623e49
gnu: petsc: Update to 3.7.2.
...
* gnu/packages/maths.scm (petsc): Update to 3.7.2.
[arguments]: Adjust scrubbed files.
2016-07-20 21:16:24 -05:00
b730b43770
gnu: petsc: Make header generation reproducible.
...
* gnu/packages/maths.scm (petsc)[arguments]: Scrub timestamp from
petscmachineinfo.h header.
2016-07-20 21:16:24 -05:00
64dcc28963
gnu: petsc: Use modify-phases.
...
* gnu/packages/maths.scm (petsc)[arguments]: Use modify-phases.
2016-07-20 21:16:24 -05:00
995a09e055
gnu: superlu: Update to 5.2.1.
...
* gnu/packages/maths.scm (superlu): Update to 5.2.1.
[source]: Remove non-free MC64 code.
[inputs]: Use openblas instead of lapack's BLAS.
[build-system]: Use cmake-build-system.
[arguments]: Remove custom phases and replace with CMake flags.
[license]: List additional licenses for some source and example files.
2016-07-20 18:31:16 -05:00
d721c83a63
gnu: Add libhilbert.
...
* gnu/packages/maths.scm (libhilbert): New variable.
2016-07-20 18:31:16 -05:00
8e9ba611cb
gnu: atlas: Use @example in description.
...
* gnu/packages/maths.scm (atlas)[description]: Use "@example".
2016-07-19 23:03:30 +02:00
d97c429a34
gnu: atlas: Use cpupower in description.
...
* gnu/packages/maths.scm (atlas)[description]: Replace 'cpufreq-selector'
with its replacement 'cpupower --governor'.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
7b569b01d3
gnu: lapack: Build the LAPACKE library.
...
* gnu/packages/maths.scm (lapack)[arguments]: Add "-DLAPACKE=ON".
2016-07-17 11:09:31 +02:00
49f54a7454
gnu: openspecfun: Update to 0.5.2.
...
* gnu/packages/maths.scm (openspecfun): Update to 0.5.2.
2016-07-03 10:14:16 +03:00
26f6e565a9
gnu: openlibm: Update to 0.5.1.
...
* gnu/packages/maths.scm (openlibm): Update to 0.5.1.
2016-07-03 10:07:17 +03:00
468e0b18d1
gnu: ceres-solver: Propagate GLOG.
...
* gnu/packages/maths.scm (ceres)[inputs]: Move GLOG to...
[propagated-inputs]: ... here. New field.
2016-06-29 16:08:46 +02:00
bc3a2e3503
gnu: ceres-solver: Depend on glog.
...
* gnu/packages/maths.scm (ceres)[arguments]: Remove -DMINIGLOG=ON.
[inputs]: Add GLOG.
2016-06-29 12:01:05 +02:00
ad1c453731
gnu: ipopt: Use libblas from LAPACK, and fix 'Libs' in 'ipopt.pc'.
...
* gnu/packages/maths.scm (ipopt)[inputs]: Remove OPENBLAS.
[arguments]: New field.
2016-06-03 14:37:26 +02:00
f9940ef1e8
gnu: Add ceres-solver.
...
* gnu/packages/maths.scm (ceres): New variable.
2016-06-03 13:54:39 +02:00
005c787d59
gnu: Add IpOpt.
...
* gnu/packages/maths.scm (ipopt): New variable.
2016-06-02 19:11:14 +02:00
de477809d7
gnu: wxmaxima: Wrap with GSETTINGS_SCHEMA_DIR and XDG_DATA_DIRS.
...
Fixes <http://bugs.gnu.org/22709 > and <http://bugs.gnu.org/23260 >.
* gnu/packages/math.scm (wxmaxima)[arguments]: Wrap with
GSETTINGS_SCHEMA_DIR and XDG_DATA_DIRS.
2016-05-28 07:29:10 +08:00
8f9ac90182
gnu: Rename texlive module to tex.
...
* gnu/local.mk (GNU_SYSTEM_MODULES): Rename texlive.scm to tex.scm.
* gnu/packages/texlive.scm: Rename file to tex.scm.
* gnu/packages/tex.scm: Renamed from texlive.scm.
* gnu/packages/algebra.scm: Adjust accordingly.
* gnu/packages/docbook.scm: Likewise.
* gnu/packages/engineering.scm: Likewise.
* gnu/packages/gettext.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/lisp.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/ocaml.scm: Likewise.
* gnu/packages/photo.scm: Likewise.
* gnu/packages/plotutils.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/scheme.scm: Likewise.
2016-05-26 10:22:05 +02:00
813efdded1
gnu: r-rcpparmadillo: Update to 0.6.700.6.0.
...
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.6.700.6.0.
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to
6.700.6.
2016-05-20 15:18:23 +02:00
945eef85c5
gnu: armadillo: Update to 6.700.7.
...
* gnu/packages/maths.scm (armadillo): Update to 6.700.7.
2016-05-20 15:18:23 +02:00
9684e30b9b
gnu: flann: Do not install .a files.
...
* gnu/packages/maths.scm (flann)[arguments]: Add #:phases.
2016-05-19 14:51:21 +02:00
39b3033731
gnu: flann: Strip .mex file.
...
* gnu/packages/maths.scm (flann)[arguments]: Add #:strip-directories.
2016-05-19 14:51:21 +02:00
b7b27a8f28
gnu: octave: Update to 4.0.2.
...
* gnu/packages/maths.scm (octave): Update to 4.0.2.
[inputs]: Added cyrus-sasl, openssl.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-05-19 04:32:23 +03:00
66395a6157
gnu: gmsh: Add missing inputs.
...
* gnu/packages/maths.scm (gmsh)[inputs]: Add fontconfig, libxft.
2016-05-16 10:18:43 +03:00
e6a905070a
gnu: wxmaxima: Update to 16.04.2.
...
* gnu/packages/maths.scm (wxmaxima): Update to 16.04.2.
2016-05-15 15:49:35 +08:00
889187a464
gnu: Add NetCDF.
...
* gnu/packages/maths.scm (netcdf, netcdf-parallel-openmpi): New variables.
2016-05-12 19:59:53 +00:00
6c90e183cf
gnu: Add Matio.
...
* gnu/packages/maths.scm (matio): New variable.
2016-05-12 19:59:52 +00:00
00775104ee
gnu: Add h5check.
...
* gnu/packages/maths.scm (h5check): New variable.
2016-05-12 19:59:52 +00:00
c8378eea10
gnu: Add hdf5-openmpi.
...
* gnu/packages/maths.scm (hdf5-openmpi): New variable.
2016-05-12 19:59:52 +00:00
b8d9c93bde
gnu: hdf5: Have configure honor SOURCE_DATE_EPOCH.
...
* gnu/packages/patches/hdf5-config-date.patch: New patch.
* gnu/packages/maths.scm (hdf5)[source]: Use it.
* gnu-system.am (dist_patch_DATA): Add it.
2016-05-12 19:59:52 +00:00
f622e2123b
gnu: hdf5: Patch output references to zlib.
...
* gnu/packages/maths.scm (hdf5)[arguments]: Use modify-phases. Add
'patch-references' phase.
2016-05-12 19:59:52 +00:00
04b7a7cd10
gnu: hdf5: Update to 1.8.17.
...
* gnu/packages/maths.scm (hdf5): Update to 1.8.17.
2016-05-12 19:59:52 +00:00
528bb46436
gnu: Add HYPRE.
...
* gnu/packages/maths.scm (hypre, hypre-openmpi): New variables.
* gnu/packages/patches/hypre-doc-tables.patch,
gnu/packages/patches/hypre-ldflags.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
2016-05-12 19:59:52 +00:00
1b39a196f8
gnu: Add nlopt.
...
* gnu/packages/maths.scm (nlopt): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-05-03 21:57:05 +02:00
c5ad883b16
gnu: r-rcpparmadillo: Update to 0.6.700.3.0.
...
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to 6.700.3.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.6.700.3.0.
2016-04-26 17:06:18 +02:00
458b47e31b
gnu: armadillo: Update to 6.700.4.
...
* gnu/packages/maths.scm (armadillo): Update to 6.700.4.
2016-04-20 14:21:30 +02:00
fc1adab148
gnu: packages: Use 'search-patches' everywhere.
...
* gnu/packages/abiword.scm: Use 'search-patches' for 'patches' field.
* gnu/packages/acl.scm: Likewise.
* gnu/packages/admin.scm: Likewise.
* gnu/packages/algebra.scm: Likewise.
* gnu/packages/animation.scm: Likewise.
* gnu/packages/apr.scm: Likewise.
* gnu/packages/audacity.scm: Likewise.
* gnu/packages/audio.scm: Likewise.
* gnu/packages/autotools.scm: Likewise.
* gnu/packages/avahi.scm: Likewise.
* gnu/packages/backup.scm: Likewise.
* gnu/packages/base.scm: Likewise.
* gnu/packages/bash.scm: Likewise.
* gnu/packages/bioinformatics.scm: Likewise.
* gnu/packages/cdrom.scm: Likewise.
* gnu/packages/ci.scm: Likewise.
* gnu/packages/cmake.scm: Likewise.
* gnu/packages/cpio.scm: Likewise.
* gnu/packages/cross-base.scm: Likewise.
* gnu/packages/dico.scm: Likewise.
* gnu/packages/doxygen.scm: Likewise.
* gnu/packages/ebook.scm: Likewise.
* gnu/packages/elf.scm: Likewise.
* gnu/packages/emacs.scm: Likewise.
* gnu/packages/engineering.scm: Likewise.
* gnu/packages/firmware.scm: Likewise.
* gnu/packages/flashing-tools.scm: Likewise.
* gnu/packages/fltk.scm: Likewise.
* gnu/packages/ftp.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/gawk.scm: Likewise.
* gnu/packages/gcc.scm: Likewise.
* gnu/packages/gd.scm: Likewise.
* gnu/packages/ghostscript.scm: Likewise.
* gnu/packages/glib.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/gnucash.scm: Likewise.
* gnu/packages/gnunet.scm: Likewise.
* gnu/packages/gnupg.scm: Likewise.
* gnu/packages/gnuzilla.scm: Likewise.
* gnu/packages/graphics.scm: Likewise.
* gnu/packages/grub.scm: Likewise.
* gnu/packages/gtk.scm: Likewise.
* gnu/packages/guile.scm: Likewise.
* gnu/packages/icu4c.scm: Likewise.
* gnu/packages/idutils.scm: Likewise.
* gnu/packages/image.scm: Likewise.
* gnu/packages/imagemagick.scm: Likewise.
* gnu/packages/irc.scm: Likewise.
* gnu/packages/ldc.scm: Likewise.
* gnu/packages/libcanberra.scm: Likewise.
* gnu/packages/libevent.scm: Likewise.
* gnu/packages/libreoffice.scm: Likewise.
* gnu/packages/libunwind.scm: Likewise.
* gnu/packages/libusb.scm: Likewise.
* gnu/packages/linux.scm: Likewise.
* gnu/packages/lirc.scm: Likewise.
* gnu/packages/llvm.scm: Likewise.
* gnu/packages/lsh.scm: Likewise.
* gnu/packages/lua.scm: Likewise.
* gnu/packages/lxqt.scm: Likewise.
* gnu/packages/mail.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/mcrypt.scm: Likewise.
* gnu/packages/messaging.scm: Likewise.
* gnu/packages/mit-krb5.scm: Likewise.
* gnu/packages/mp3.scm: Likewise.
* gnu/packages/multiprecision.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/ninja.scm: Likewise.
* gnu/packages/nvi.scm: Likewise.
* gnu/packages/ocaml.scm: Likewise.
* gnu/packages/orpheus.scm: Likewise.
* gnu/packages/ots.scm: Likewise.
* gnu/packages/parallel.scm: Likewise.
* gnu/packages/patchutils.scm: Likewise.
* gnu/packages/pcre.scm: Likewise.
* gnu/packages/pdf.scm: Likewise.
* gnu/packages/perl.scm: Likewise.
* gnu/packages/plotutils.scm: Likewise.
* gnu/packages/polkit.scm: Likewise.
* gnu/packages/pulseaudio.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/qemu.scm: Likewise.
* gnu/packages/qt.scm: Likewise.
* gnu/packages/ratpoison.scm: Likewise.
* gnu/packages/rdf.scm: Likewise.
* gnu/packages/readline.scm: Likewise.
* gnu/packages/rush.scm: Likewise.
* gnu/packages/scheme.scm: Likewise.
* gnu/packages/screen.scm: Likewise.
* gnu/packages/sdl.scm: Likewise.
* gnu/packages/slim.scm: Likewise.
* gnu/packages/ssh.scm: Likewise.
* gnu/packages/tcl.scm: Likewise.
* gnu/packages/tcsh.scm: Likewise.
* gnu/packages/texinfo.scm: Likewise.
* gnu/packages/tls.scm: Likewise.
* gnu/packages/tor.scm: Likewise.
* gnu/packages/tv.scm: Likewise.
* gnu/packages/valgrind.scm: Likewise.
* gnu/packages/version-control.scm: Likewise.
* gnu/packages/video.scm: Likewise.
* gnu/packages/vpn.scm: Likewise.
* gnu/packages/vtk.scm: Likewise.
* gnu/packages/w3m.scm: Likewise.
* gnu/packages/web.scm: Likewise.
* gnu/packages/wicd.scm: Likewise.
* gnu/packages/wm.scm: Likewise.
* gnu/packages/xdisorg.scm: Likewise.
* gnu/packages/xfce.scm: Likewise.
* gnu/packages/xiph.scm: Likewise.
* gnu/packages/xml.scm: Likewise.
* gnu/packages/xorg.scm: Likewise.
* gnu/packages/zip.scm: Likewise.
2016-04-14 10:38:21 +03:00
ec8c7e4734
gnu: Add r-pracma.
...
* gnu/packages/maths.scm (r-pracma): New variable.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-04-12 14:55:10 -04:00
9c45c51992
gnu: Add c-graph.
...
* gnu/packages/maths.scm (c-graph): New variable.
2016-04-09 09:16:48 +02:00
53696f10c1
gnu: Add cddlib.
...
* gnu/packages/maths.scm (cddlib): New variable.
2016-04-05 19:22:36 +02:00
b146763a86
gnu: Add 4ti2.
...
* gnu/packages/maths.scm (4ti2): New variable.
2016-04-05 18:48:02 +02:00
0b65f1a013
gnu: Move pspp from maths.scm to statistics.scm
...
* gnu/packages/maths.scm (pspp): Deleted.
* gnu/packages/statistics.scm (pspp): New variable.
2016-04-04 07:15:14 +02:00
fd7575d479
gnu: pspp: Update to 0.10.1.
...
* gnu/packages/maths.scm (pspp): Update to 0.10.1.
2016-04-03 08:47:35 +03:00
f04433773d
gnu: glpk: Update to 4.60.
...
* gnu/packages/maths.scm (glpk): Update to 4.60.
2016-04-01 16:52:54 +03:00
e12f047f75
gnu: pspp: Update to 0.10.0.
...
* gnu/packages/maths.scm (pspp): Update to 0.10.0.
[inputs]: Switch gtk+-2 to gtk+, gtksourceview-2 to gtksourceview.
2016-03-26 22:39:29 +03:00
dfdf571688
gnu: petsc: Fix compiler configuration references.
...
* gnu/packages/maths.scm (petsc)[arguments]: When patching compiler
driver paths, do not assume they come from fortran input.
2016-03-16 18:32:25 -05:00
d588422e13
gnu: slepc: Set origin file-name.
...
* gnu/packages/maths.scm (slepc)[source]: Add file-name.
2016-03-16 18:32:25 -05:00
eb4f2cd7e3
gnu: glpk: Update to 4.59.
...
* gnu/packages/maths.scm (glpk): Update to 4.59.
2016-03-12 23:07:09 +02:00
289adba7a3
gnu: gnuplot: Use texlive-minimal instead of texlive-bin.
...
* gnu/packages/maths.scm (gnuplot)[inputs]: Replace texlive-bin by
texlive-minimal.
2016-03-09 22:36:45 +01:00
723a6910ca
gnu: glpk: Update to 4.58.
...
* gnu/packages/maths.scm (glpk): Update to 4.58.
2016-02-18 15:35:28 +02:00
ec4130b7e7
gnu: gnuplot: Update to 5.0.2.
...
* gnu/packages/maths.scm (gnuplot): Update to 5.0.2.
2016-02-13 13:37:49 +01:00
c7b08410de
gnu: gmsh: Update to 2.11.0.
...
* gnu/packages/maths.scm (gmsh): Update to 2.11.0.
[arguments]: Replace 'check phase.
2016-01-06 10:49:23 -06:00
45147b0caa
gnu: Add xaos.
...
* gnu/packages/maths.scm (xaos): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
2015-12-31 11:29:43 +03:00
e22d4ca4c4
gnu: Add r-rcpparmadillo.
...
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): New variable.
* gnu/packages/statistics.scm (r-rcpparmadillo): New variable.
2015-12-21 16:05:37 +01:00
b15e47f9e6
gnu: Add armadillo.
...
* gnu/packages/maths.scm (armadillo): New variable.
2015-12-21 15:47:40 +01:00
97003b5ccc
gnu: gnuplot: Update to 5.0.1.
...
* gnu/packages/maths.scm (gnuplot): Update to 5.0.1.
(native-inputs): 'texlive' -> 'texlive-bin'.
2015-11-24 11:41:46 -06:00
9cf5245497
gnu: slepc: Update to 3.6.2.
...
* gnu/packages/maths.scm (slepc): Update to 3.6.2.
[arguments]: Append "/lib" to arpack configure flag. Use 'inputs'
rather than '%build-inputs' in 'configure phase.
2015-11-20 11:58:40 -06:00
32187d99bb
gnu: petsc: Update to 3.6.2.
...
* gnu/packages/maths.scm (petsc): Update to 3.6.2.
2015-11-20 11:58:40 -06:00
c69fa4380a
gnu: mumps: Update to 5.0.1.
...
* gnu/packages/maths.scm (mumps): Update to 5.0.1.
2015-11-20 11:58:40 -06:00
a124bbd2f4
gnu: Adjust formatting as recommended by 'guix lint'.
...
* gnu/packages/aidc.scm (barcode, qrencode),
gnu/packages/bash.scm (bash, bash-completion),
gnu/packages/busybox.scm (busybox),
gnu/packages/cdrom.scm (cdparanoia),
gnu/packages/cmake.scm (cmake),
gnu/packages/conkeror.scm (conkeror),
gnu/packages/cook.scm (cook),
gnu/packages/curl.scm (curl),
gnu/packages/docbook.scm (docbook-xsl),
gnu/packages/enlightenment.scm (enlightenment),
gnu/packages/games.scm (abbaye),
gnu/packages/geeqie.scm (exiv2),
gnu/packages/gimp.scm (gegl),
gnu/packages/gl.scm (glu, freeglut, ftgl),
gnu/packages/glib.scm (glib),
gnu/packages/gnome.scm (orbit2, gconf, geocode-glib),
gnu/packages/gstreamer.scm (gstreamer, gst-plugins-base),
gnu/packages/linux.scm (util-linux),
gnu/packages/lisp.scm (gcl, ecl),
gnu/packages/maths.scm (gnuplot, hdf5),
gnu/packages/ssh.scm (dropbear),
gnu/packages/web.scm (json-c): Remove tabulations and trailing
white spaces or reformat to fit within 80 columns.
* gnu/packages/audio.scm (aubio),
gnu/packages/emacs.scm (emacs-s),
gnu/packages/engineering.scm (geda-gaf),
gnu/packages/games.scm (dosbox),
gnu/packages/gnome.scm (gusb),
gnu/packages/gtk.scm (gtk+),
gnu/packages/guile.scm (guile-wisp),
gnu/packages/hurd.scm (hurd-headers),
gnu/packages/wm.scm (i3-wm): Adjust synopsis or description.
2015-11-13 23:45:55 +08:00
0534dd93ce
gnu: gsl: Update to 2.1.
...
* gnu/packages/maths.scm (gsl): Update to 2.1.
2015-11-12 16:53:43 +02:00
295fc0829b
gnu: pspp: Use gtksourceview-2.
...
* gnu/packages/maths.scm (pspp)[inputs]: Use gtksourceview-2.
2015-11-10 13:58:25 +02:00
d8c97beb06
gnu: Add wcalc.
...
* gnu/packages/maths.scm (wcalc): New variable.
2015-11-08 23:01:50 +02:00
19659accef
gnu: octave: Upgrade to 4.0.0.
...
* gnu/packages/maths.scm (octave): Update to 4.0.0.
2015-11-08 18:44:06 +02:00
552cb93c0a
gnu: glpk: Update to 4.57.
...
* gnu/packages/maths.scm (glpk): Update to 4.57.
2015-11-08 16:27:39 +02:00
5adbe65fec
gnu: gsl: Enable tests.
...
* gnu/packages/maths.scm (gsl)[arguments]: Enable tests for i686-linux.
2015-11-02 21:04:18 +02:00
f133955122
gnu: gsl: Update to 2.0.
...
* gnu/packages/maths.scm (gsl): Update to 2.0.
[source]: Remove patches.
* gnu/packages/patches/gsl-poly-test-fix-pt1.patch,
gnu/packages/patches/gsl-poly-test-fix-pt2.patch: Remove files.
* gnu-system.am (dist_patch_DATA): Remove patches.
2015-11-02 21:04:18 +02:00
bd0b4379b2
gnu: openblas: Make substitutable on MIPS.
...
* gnu/packages/maths.scm (openblas)[arguments]: Make package
substitutable when the system is MIPS.
2015-10-30 17:47:54 +01:00
8a637e79ed
gnu: openblas: Set TARGET to SICORTEX on MIPS.
...
* gnu/packages/maths.scm (openblas)[arguments]: Add "TARGET=SICORTEX" to
make-flags when building for MIPS.
2015-10-30 17:47:54 +01:00
69851c59c7
gnu: openblas: Update to 0.2.15.
...
* gnu/packages/maths.scm (openblas): Update to 0.2.15.
2015-10-29 15:44:31 +01:00
cbe9505778
gnu: units: Update to 2.12.
...
* gnu/packages/maths.scm (units): Update to 2.12.
2015-10-20 09:41:54 +03:00
127cbd85c0
gnu: glpk: Update to 4.56.
...
* gnu/packages/maths.scm (glpk): Update to 4.56.
2015-10-02 20:07:17 +02:00
71923a91b1
gnu: openblas: Fix configure flags on armhf and take target system into account for cross building.
...
* gnu/packages/maths.scm (openblas)[arguments]: Make package substitutable
and enable runtime cpu detection only on x86 systems. Take the target
system into account when cross compiling.
2015-10-01 19:35:16 +02:00
75710da667
Merge branch 'master' into core-updates
2015-09-13 21:28:01 +02:00
194c7f95f1
gnu: Add FLANN.
...
* gnu/packages/maths.scm (flann): New variable.
2015-09-06 19:34:09 +02:00
96c4621056
gnu: Use 'install-file' instead of 'mkdir-p' and 'copy-file' in obvious cases.
...
* gnu/packages/bioinformatics.scm (bedtools, bowtie, bwa, hisat, samtools,
plink, star): Use 'install-file' instead of 'mkdir-p' + 'copy-file'.
* gnu/packages/check.scm (catch-framework): Likewise.
* gnu/packages/code.scm (global): Likewise.
* gnu/packages/emacs.scm (magit-svn, haskell-mode, emacs-pdf-tools):
Likewise.
* gnu/packages/engineering.scm (fastcap, fasthenry): Likewise.
* gnu/packages/gnuzilla.scm (nss): Likewise.
* gnu/packages/guile.scm (guile-minikanren): Likewise.
* gnu/packages/java.scm (swt): Likewise.
* gnu/packages/make-bootstrap.scm (%static-binaries): Likewise.
* gnu/packages/maths.scm (lpsolve): Likewise.
* gnu/packages/mp3.scm (mpc123): Likewise.
* gnu/packages/ninja.scm (ninja): Likewise.
* gnu/packages/python.scm (python-numpy, python-pyparsing): Likewise.
* gnu/packages/screen.scm (dtach): Likewise.
* gnu/packages/synergy.scm (synergy): Likewise.
* gnu/packages/textutils.scm (utf8proc): Likewise.
* gnu/packages/version-control.scm (git-test-sequence): Likewise.
* gnu/packages/wicd.scm (wicd): Likewise.
2015-08-29 01:25:08 +02:00
c01876b1af
gnu: pspp: Update to 0.8.5.
...
* gnu/packages/maths.scm (pspp)[source]: Update to 0.8.5.
[native-inputs]: Add TEXINFO.
2015-07-21 01:12:34 +02:00
e881752c39
gnu packages: Clean up synopses and descriptions.
...
* gnu/packages/admin.scm, gnu/packages/algebra.scm, gnu/packages/audio.scm,
gnu/packages/backup.scm, gnu/packages/base.scm, gnu/packages/bittorrent.scm,
gnu/packages/code.scm, gnu/packages/compression.scm,
gnu/packages/databases.scm, gnu/packages/enchant.scm,
gnu/packages/firmware.scm, gnu/packages/fonts.scm,
gnu/packages/freedesktop.scm, gnu/packages/games.scm, gnu/packages/gd.scm,
gnu/packages/gl.scm, gnu/packages/gnome.scm, gnu/packages/gsasl.scm,
gnu/packages/gstreamer.scm, gnu/packages/gtk.scm, gnu/packages/guile.scm,
gnu/packages/haskell.scm, gnu/packages/language.scm,
gnu/packages/lesstif.scm, gnu/packages/libreoffice.scm,
gnu/packages/linux.scm, gnu/packages/llvm.scm, gnu/packages/maths.scm,
gnu/packages/mcrypt.scm, gnu/packages/mit-krb5.scm, gnu/packages/mp3.scm,
gnu/packages/ncdu.scm, gnu/packages/networking.scm, gnu/packages/ntp.scm,
gnu/packages/ocaml.scm, gnu/packages/openbox.scm, gnu/packages/pdf.scm,
gnu/packages/perl.scm, gnu/packages/pretty-print.scm,
gnu/packages/pulseaudio.scm, gnu/packages/python.scm,
gnu/packages/rdesktop.scm, gnu/packages/rdf.scm, gnu/packages/ruby.scm,
gnu/packages/slang.scm, gnu/packages/slim.scm, gnu/packages/telephony.scm,
gnu/packages/tls.scm, gnu/packages/tmux.scm, gnu/packages/tre.scm,
gnu/packages/unrtf.scm, gnu/packages/version-control.scm,
gnu/packages/vpn.scm, gnu/packages/web.scm, gnu/packages/wget.scm,
gnu/packages/xdisorg.scm, gnu/packages/xfce.scm, gnu/packages/xiph.scm:
Fix typos. Trim long lines. Add missing periods in the end of sentences.
Use double spaces between sentences. Remove trailing whitespaces.
2015-07-18 13:05:01 +03:00
7c125ce023
gnu packages: Avoid description lines with leading "(".
...
* gnu/packages/curl.scm (curl): Reformat description to avoid a line
beginning with "(" because such lines break font-lock highlighting
in Emacs.
* gnu/packages/flashing-tools.scm (dfu-programmer): Likewise.
* gnu/packages/games.scm (gnugo): Likewise.
* gnu/packages/gnome.scm (json-glib): Likewise.
* gnu/packages/image.scm (jbig2dec): Likewise.
* gnu/packages/maths.scm (units): Likewise.
* gnu/packages/pdf.scm (mupdf): Likewise.
* gnu/packages/web.scm (perl-encode-locale): Likewise.
* gnu/packages/wordnet.scm (wordnet): Likewise.
* gnu/packages/xml.scm (libxml2):Likewise.
2015-07-18 13:05:01 +03:00
a17d45641b
gnu: Add deal.II.
...
* gnu/packages/maths.scm (dealii, dealii-openmpi): New variables.
* gnu/packages/patches/dealii-p4est-interface.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-29 15:34:36 -05:00
a7f0141452
gnu: Add SLEPc.
...
* gnu/packages/maths.scm (slepc, slepc-complex, slepc-openmpi)
(slepc-complex-openmpi): New variables.
2015-06-29 15:34:36 -05:00
8c94c886f6
gnu: Add arpack-ng-openmpi.
...
* gnu/packages/maths.scm (arpack-ng-openmpi): New variable.
2015-06-29 15:34:36 -05:00
9a899cceab
gnu: petsc: Upgrade to 3.6.0.
...
* gnu/packages/maths.scm (petsc): Upgrade to 3.6.0.
* gnu/packages/patches/petsc-fix-threadcomm.patch: Delete patch.
* gnu-system.am (dist_patch_DATA): Remove it.
2015-06-29 15:34:36 -05:00
cec86422b7
gnu: Add MUMPS.
...
* gnu/packages/maths.scm (mumps, mumps-metis, mumps-openmpi)
(mumps-metis-openmpi): New variables.
* gnu/packages/patches/mumps-build-parallelism.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-29 15:34:36 -05:00
aa75ad0097
gnu: Add METIS.
...
* gnu/packages/maths.scm (metis): New variable.
2015-06-29 15:34:36 -05:00
700ff22219
gnu: Add p4est.
...
* gnu/packages/maths.scm (p4est, p4est-openmpi): New variables.
2015-06-29 15:34:36 -05:00
e1ff597a64
gnu: Add ScaLAPACK.
...
* gnu/packages/maths.scm (scalapack): New variable.
2015-06-29 15:34:36 -05:00
cf0ec6c46e
gnu: scotch, pt-scotch: Build esmumps libraries.
...
* gnu/packages/maths.scm (scotch)[arguments]: Add 'build-esmumps
phase. Install esmumps libraries and headers in 'install phase.
(pt-scotch)[arguments]: Build ptesmumps in 'build phase. Add
make parallelism.
2015-06-29 15:34:36 -05:00
d6602ee9d4
gnu: scotch, pt-scotch: Use modify-phases.
...
* gnu/packages/maths.scm (scotch, pt-scotch)[arguments]: Use modify-phases.
2015-06-29 15:34:36 -05:00
6c7985408f
gnu: Update scotch to 6.0.4.
...
* gnu/packages/maths.scm (scotch): Update to 6.0.4.
[arguments]: Add -fPIC to CFLAGS.
* gnu/packages/patches/scotch-test-threading.patch: Adjust patch for a
new set of test fixes.
* gnu/packages/patches/pt-scotch-build-parallelism.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
2015-06-29 15:34:36 -05:00
19afbea136
gnu: Replace versioned gfortran inputs with just "gfortran".
...
* gnu/packages/julia.scm (julia)[inputs]: Replace "gfortran-4.8" with
"gfortran".
* gnu/packages/machine-learning.scm (randomjungle)[native-inputs]: Likewise.
* gnu/packages/maths.scm (arpack-ng, lapack, petsc, superlu)
(superlu-dist, openblas, openspecfun, atlas)[inputs]: Likewise.
(octave)[native-inputs]: Likewise.
(gmsh)[propagated-inputs]: Likewise.
* gnu/packages/mpi.scm (openmpi)[inputs]: Likewise.
* gnu/packages/python.scm (python-numpy-bootstrap)[native-inputs]: Likewise.
* gnu/packages/python.scm (python-scipy)[native-inputs]: Likewise.
* gnu/packages/statistics.scm (r)[inputs]: Replace "gfortran-4.9" with
"gfortran".
2015-06-25 18:28:54 +02:00
180a93c72a
gnu: gsl: Fix poly test on i686.
...
* gnu/packages/patches/gsl-poly-test-fix-pt1.patch,
gnu/packages/patches/gsl-poly-test-fix-pt2.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/maths.scm (gsl)[source]: Add patches.
2015-06-20 01:38:56 -04:00
0004c5904c
packages: Make 'location' field innate.
...
* guix/packages.scm (<package>)[location]: Add 'innate' property.
* guix/build-system/gnu.scm (static-package): Remove 'loc' parameter and
'location' field.
* gnu/packages/autotools.scm (autoconf-wrapper): Remove 'location' field.
* gnu/packages/commencement.scm (gnu-make-boot0, diffutils-boot0, gcc-final):
Likewise.
* gnu/packages/cross-base.scm (cross): Likewise.
* gnu/packages/emacs.scm (emacs-no-x, emacs-no-x-toolkit): Likewise.
* gnu/packages/make-bootstrap.scm (tarball-package): Likewise.
* gnu/packages/maths.scm (petsc-complex): Likewise.
2015-06-11 23:33:32 +02:00
9aafbc0c13
gnu: Add wxmaxima.
...
* gnu/packages/maths.scm (wxmaxima): New variable.
2015-05-26 10:24:11 -04:00
77af7b2407
gnu: maxima: Update to 5.36.1.
...
* gnu/packages/patches/maxima-defsystem-mkdir.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (maxima): Update to 5.36.1. Add patch.
2015-05-26 10:23:38 -04:00
7f18257bea
gnu: Add lpsolve.
...
* gnu/packages/maths.scm (lpsolve): New variable.
2015-05-20 23:21:50 +02:00
5b5ea159ac
gnu: openblas: Disable DYNAMIC_ARCH on MIPS.
...
* gnu/packages/maths.scm (openblas)[arguments]: Do not pass DYNAMIC_ARCH when
building for MIPS. Also make non-substitutable for MIPS.
2015-05-20 13:30:24 +02:00
ecf28847b2
gnu: openblas: Update to 0.2.14.
...
* gnu/packages/maths.scm (openblas): Update to 0.2.14.
2015-05-15 13:53:30 +02:00
1ec78e9d71
gnu: octave: Add fftw, arpack, and glu inputs.
...
* gnu/packages/maths.scm (octave)[inputs]: Add fftw, fftwf, arpack,
and glu.
[description]: Wrap to 80 columns.
2015-05-11 10:10:00 -05:00
af5b817ea9
gnu: openblas: build for all supported CPUs.
...
* gnu/packages/maths.scm (openblas)[arguments]: Add "DYNAMIC_ARCH=1" to
make flags. Remove "#:substitutable? #f".
2015-03-26 07:54:55 +01:00
87db65507e
Remove unused patchelf inputs.
...
* gnu/packages/maths.scm (lapack, gmsh), gnu/packages/ssh.scm (libssh): Remove
unused patchelf from native-inputs.
2015-03-23 13:30:06 -04:00
61a529b421
gnu: Add double-conversion.
...
* gnu/packages/maths.scm (double-conversion): New variable.
2015-03-23 10:38:06 +01:00
2742f87e17
gnu: Add SuiteSparse.
...
* gnu/packages/maths.scm (suitesparse): New variable.
2015-03-23 10:19:45 +01:00
e73b49fbd6
gnu: Add openblas.
...
* gnu/packages/maths.scm (openblas): New variable.
2015-03-23 10:08:28 +01:00
166191b377
gnu: Update packages to use 'non-copyleft' instead of 'bsd-style'.
...
* gnu/packages/avr.scm, gnu/packages/compression.scm,
gnu/packages/curl.scm, gnu/packages/cyrus-sasl.scm,
gnu/packages/databases.scm, gnu/packages/firmware.scm,
gnu/packages/flex.scm, gnu/packages/fontutils.scm,
gnu/packages/gd.scm, gnu/packages/ghostscript.scm,
gnu/packages/gnunet.scm, gnu/packages/graphics.scm,
gnu/packages/hugs.scm, gnu/packages/image.scm,
gnu/packages/linux.scm, gnu/packages/mail.scm,
gnu/packages/maths.scm, gnu/packages/mit-krb5.scm,
gnu/packages/python.scm, gnu/packages/rdf.scm,
gnu/packages/ssh.scm, gnu/packages/tcl.scm,
gnu/packages/xdisorg.scm, gnu/packages/xiph.scm,
gnu/packages/yasm.scm, gnu/packages/zip.scm: Use 'non-copyleft'
instead of 'bsd-style'.
2015-03-14 19:27:14 +01:00
c12efc72cf
gnu: Add glm.
...
* gnu/packages/maths.scm (glm): New variable.
Co-authored-by: John Darrington <john@darrington.wattle.id.au>
2015-03-14 17:39:58 +01:00
12ed1216de
gnu: hdf5: Add input zlib.
...
* gnu/packages/maths.scm (hdf5): Add input zlib.
2015-03-13 00:15:47 +01:00
40029cbe30
gnu: hdf5: Combine all outputs into one.
...
* gnu/packages/maths.scm (hdf5): Combine the outputs "out", "bin", "lib" and
"include" into "out".
(gmsh, octave): Adapt list of inputs.
2015-03-12 23:59:49 +01:00
e62be58fc3
gnu: Add openspecfun.
...
* gnu/packages/maths.scm (openspecfun): New variable.
2015-03-10 23:39:12 +01:00
e1605e36a8
gnu: Add openlibm.
...
* gnu/packages/maths.scm (openlibm): New variable.
2015-03-10 23:38:55 +01:00
279663efa5
gnu: Add muparser.
...
* gnu/packages/maths.scm (muparser): New variable.
2015-03-05 08:01:15 +01:00
1289062522
Merge branch 'core-updates'.
2015-03-04 14:07:23 +01:00
32158110b0
gnu: octave: Update to 3.8.2.
...
* gnu/packages/maths.scm (octave): Update to 3.8.2.
2015-03-04 16:45:23 +08:00
f586c87705
gnu: Add 'file-name' fields for github source tarballs without a name.
...
* gnu/packages/aarddict.scm (aarddict), gnu/packages/algebra.scm (arb),
gnu/packages/audio.scm (jack-2, lvtk),
gnu/packages/bioinformatics.scm (bedops, bedtools, bowtie),
gnu/packages/game-development.scm (tiled),
gnu/packages/games.scm (minetest-data, minetest, retroarch),
gnu/packages/jrnl.scm (jrnl), gnu/packages/kde.scm (qjson),
gnu/packages/libevent.scm (libuv), gnu/packages/linux.scm (pflask),
gnu/packages/mail.scm (offlineimap, libetpan),
gnu/packages/maths.scm (arpack-ng), gnu/packages/ninja.scm (ninja),
gnu/packages/nutrition.scm (gourmet),
gnu/packages/python.scm (python-cairocffi), gnu/packages/rdf.scm (lrdf),
gnu/packages/ruby.scm (ruby-i18n), gnu/packages/sxiv.scm (sxiv): Add
'file-name' field to origin.
2015-02-28 09:49:01 -05:00
865a69ddc8
gnu: Add arpack-ng.
...
* gnu/packages/maths.scm (arpack-ng): New variable.
2015-02-20 14:26:48 +01:00
85f4190221
gnu: gmsh: Add glu to inputs.
...
* gnu/packages/maths.scm (gmsh): Add glu to inputs.
2014-12-27 11:18:29 -05:00
01480b9e1c
gnu: atlas: Remove MIPS from 'supported-systems'.
...
* gnu/packages/maths.scm (atlas): Drop support for "mips64el-linux".
2014-12-08 09:54:34 +01:00
af89a66735
gnu: atlas: Try to fix build on MIPS.
...
* gnu/packages/maths.scm (atlas): Add MIPS specific configure flags.
2014-11-23 15:37:29 +01:00
f15615b119
gnu: atlas: Make it non-substitutable.
...
Suggested by Federico Beffa <beffa@ieee.org>.
* gnu/packages/maths.scm (atlas)[arguments]: Pass #:substitutable? #f.
[description]: Adjust accordingly.
2014-10-28 10:17:55 +01:00
Efraim Flashner