Commit Graph

35278 Commits

Author SHA1 Message Date
Leo Famulari 767579d18b
gnu: go-github-com-sasha-s-go-deadlock: Update to 0.2.0.
* gnu/packages/syncthing.scm (go-github-com-sasha-s-go-deadlock): Update
to 0.2.0.
2019-03-14 15:34:27 -04:00
Leo Famulari c36177c698
gnu: go-github-com-pkg-errors: Update to 0.8.1.
* gnu/packages/syncthing.scm (go-github-com-pkg-errors): Update to 0.8.1.
2019-03-14 15:34:27 -04:00
Leo Famulari 061387ea32
gnu: go-github-com-syncthing-notify: Update to 0.0.0-4.4e389ea.
* gnu/packages/syncthing.scm (go-github-com-syncthing-notify): Update to
0.0.0-4.4e389ea.
2019-03-14 15:34:27 -04:00
Leo Famulari edda279fda
gnu: go-github-com-d4l3k-messagediff: Update to 1.2.1.
* gnu/packages/syncthing.scm (go-github-com-d4l3k-messagediff): Update to 1.2.1.
2019-03-14 15:34:27 -04:00
Leo Famulari 2fcd1c84af
gnu: go-github-com-chmduquesne-rollinghash-adler32: Update to 4.0.0-0.a60f8e7.
* gnu/packages/syncthing.scm (go-github-com-chmduquesne-rollinghash-adler32):
Update to 4.0.0-0.a60f8e7.
2019-03-14 15:34:27 -04:00
Leo Famulari 9c359ff445
gnu: Remove the various Go union meta-packages.
* gnu/packages/golang.scm (go-github-com-gogo-protobuf-union,
go-golang-org-x-crypto-union): Remove variables.
(go-golang-org-x-crypto-bcrypt, go-golang-org-x-crypto-blowfish,
go-golang-org-x-crypto-pbkdf2, go-golang-org-x-crypto-tea,
go-golang-org-x-crypto-xtea, go-golang-org-x-crypto-salsa20,
go-golang-org-x-crypto-twofish,)[arguments]: Remove obsolete
'make-gzip-archive-writable' phase.
(go-golang-org-x-crypto-ed25519)[arguments]: The phase
'make-gzip-archive-writable' belongs here now.
(go-github-com-multiformats-go-multihash)[native-inputs]: Remove
go-golang-org-x-crypto-union. Add go-golang-org-x-crypto-blake2s and
go-golang-org-x-crypto-sha3.
(go-github-com-libp2p-go-libp2p-peer)[native-inputs]: Remove
go-golang-org-x-crypto-union. Add go-golang-org-x-crypto-blake2s,
go-golang-org-x-crypto-ed25519, and go-golang-org-x-crypto-sha3.
(go-github-com-libp2p-go-libp2p-metrics)[native-inputs]: Remove
go-golang-org-x-crypto-union. Add go-golang-org-x-crypto-sha3,
go-golang-org-x-crypto-ed25519, and go-golang-org-x-crypto-blake2s.
(go-github-com-multiformats-go-multiaddr)[native-inputs]: Remove
go-golang-org-x-crypto-union. Add go-golang-org-x-crypto-sha3 and
go-golang-org-x-crypto-blake2s.
(go-github-com-multiformats-go-multiaddr-net)[native-inputs]: Remove
go-golang-org-x-crypto-union. Add go-golang-org-x-crypto-sha3 and
go-golang-org-x-crypto-blake2s.
* gnu/packages/ipfs.scm (go-github-com-ipfs-go-ipfs-api)[native-inputs]: Remove
go-golang-org-x-crypto-union. Add go-golang-org-x-crypto-blake2s,
go-golang-org-x-crypto-ed25519, and go-golang-org-x-crypto-sha3.
(gx)[native-inputs]: Remove go-golang-org-x-crypto-union. Add
go-golang-org-x-crypto-blake2s, go-golang-org-x-crypto-ed25519, and
go-golang-org-x-crypto-sha3.
(gx-go)[native-inputs]: Remove go-golang-org-x-crypto-union. Add
go-golang-org-x-crypto-blake2s, go-golang-org-x-crypto-ed25519, and
go-golang-org-x-crypto-sha3.
* gnu/packages/syncthing.scm: Remove go-golang-org-x-text-union,
go-golang-org-x-net-union, and go-github-com-vitrun-qart-union.
2019-03-14 15:34:26 -04:00
Leo Famulari e3900a4d64
build-system/go: Build with a filesystem union of Go dependencies.
This basically changes (guix build-system go) so that instead of looking
up its dependencies in a list of directories in $GOPATH, all the
Go dependencies are symlinked into a single directory.

Fixes <https://bugs.gnu.org/33620>.

* guix/build/go-build-system.scm (setup-go-environment): New variable.
(setup-environment, install-source): Remove variables.
(unpack): Unpack the source relative to $GOPATH.
(install): Do not install the compiled objects in the 'pkg' directory.
Install the source code in this phase, and only install the source of
the package named by IMPORT-PATH.
* doc/guix.texi (Build Systems): Adjust accordingly.
* gnu/packages/docker.scm (docker): Import (guix build union) on the build side
and adjust to build phase name changes in (guix build-system go).
* gnu/packages/shellutils.scm (direnv): Likewise.
* gnu/packages/databases.scm (mongo-tools)[arguments]:
Set '#:install-source #f'.
* gnu/packages/music.scm (demlo)[arguments]: Move the 'install-scripts'
phase after the 'install' phase.
2019-03-14 15:34:26 -04:00
Leo Famulari 5a14b913ad
gnu: Remove Go 1.9.
* gnu/packages/golang.scm (go-1.9): Remove variable.
(go-1.11): Inherit from go-1.4 and consolidate the inherited build
phases from go-1.9.

Go 1.11 should be essentially unchanged with this commit, although the
derivation is different.
2019-03-14 15:34:26 -04:00
Tobias Geerinckx-Rice a503071797
gnu: python-flexmock: Update to 0.10.3.
* gnu/packages/check.scm (python-flexmock): Update to 0.10.3.
2019-03-14 19:47:30 +01:00
Tobias Geerinckx-Rice fbec363e55
gnu: python-freezegun: Update to 0.3.11.
* gnu/packages/check.scm (python-freezegun): Update to 0.3.11.
2019-03-14 19:47:30 +01:00
Tobias Geerinckx-Rice bca0b66424
gnu: python-nose-timer: Update to 0.7.4.
* gnu/packages/check.scm (python-nose-timer): Update to 0.7.4.
2019-03-14 19:47:30 +01:00
Tobias Geerinckx-Rice 4a17211ad0
gnu: aubio: Update to 0.4.9.
* gnu/packages/audio.scm (aubio): Update to 0.4.9.
2019-03-14 19:47:29 +01:00
Tobias Geerinckx-Rice 0b75db34d4
gnu: qjackctl: Update to 0.5.6.
* gnu/packages/audio.scm (qjackctl): Update to 0.5.6.
2019-03-14 19:47:29 +01:00
Tobias Geerinckx-Rice 9d4e42dcfb
gnu: qsynth: Update to 0.5.5.
* gnu/packages/audio.scm (qsynth): Update to 0.5.5.
2019-03-14 19:47:29 +01:00
Tobias Geerinckx-Rice 205df73940
gnu: Move libconfuse to (gnu packages textutils).
* gnu/packages/wm.scm (libconfuse): Move…
* gnu/packages/textutils.scm (libconfuse): …to here.
Adjust all imports.
2019-03-14 19:47:28 +01:00
Tobias Geerinckx-Rice 2fe29c8490
gnu: sslh: Update to 1.20.
* gnu/packages/networking.scm (sslh): Update to 1.20.
[native-inputs]: Add perl-conf-libconfig. Remove valgrind.
[arguments]: Re-indent.
2019-03-14 19:47:28 +01:00
Tobias Geerinckx-Rice 98580bd93a
gnu: Add perl-conf-libconfig.
* gnu/packages/perl.scm (perl-conf-libconfig): New public variable.
2019-03-14 19:47:27 +01:00
Tobias Geerinckx-Rice 925926bab1
gnu: sslh: Don't use unstable tarball.
* gnu/packages/networking.scm (sslh)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-14 19:47:27 +01:00
Danny Milosavljevic 625697ea60
gnu: lxqt-about: Make it more reproducible.
* gnu/packages/lxqt.scm (lxqt-about)[arguments]<#:phases>[setenv]: New phase.
2019-03-14 16:47:19 +01:00
Meiyo Peng 50bc1d0125
gnu: screengrab: Update to 1.101.
* gnu/packages/lxqt.scm (screengrab): Update to 1.101.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:19 +01:00
Meiyo Peng d30cd1a552
gnu: qterminal: Update to 0.14.1.
* gnu/packages/lxqt.scm (qterminal): Update to 0.14.1.
[arguments]: Remove #:configure-flags.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:19 +01:00
Meiyo Peng 238e42a3e5
gnu: qtermwidget: Update to 0.14.1.
* gnu/packages/lxqt.scm (qtermwidget): Update to 0.14.1.
[arguments]: Remove #:configure-flags.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng 6d3a2dbef1
gnu: qps: Update to 1.10.20.
* gnu/packages/lxqt.scm (qps): Update to 1.10.20.
[native-inputs]: Add lxqt-build-tools.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng f376b3254c
gnu: pavucontrol-qt: Update to 0.14.1.
* gnu/packages/lxqt.scm (pavucontrol-qt): Update to 0.14.1.
[arguments]: Remove #:configure-flags.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng b42bd22ebd
gnu: obconf-qt: Update to 0.14.1.
* gnu/packages/lxqt.scm (obconf-qt): Update to 0.14.1.
[arguments]: Remove #:configure-flags.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng f2a8c02c9a
gnu: lximage-qt: Update to 0.14.1.
* gnu/packages/lxqt.scm (lximage-qt): Update to 0.14.1.
[arguments]: Remove #:configure-flags.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng 3f0294c196
gnu: compton-conf: Update to 0.14.1.
* gnu/packages/lxqt.scm (compton-conf): Update to 0.14.1.
[arguments]: Remove #:configure-flags.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng cd7248bb42
gnu: pcmanfm-qt: Update to 0.14.1.
* gnu/packages/lxqt.scm (pcmanfm-qt): Update to 0.14.1.
[arguments]: Remove #:configure-flags.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng b3f562921e
gnu: libfm-qt: Update to 0.14.1.
* gnu/packages/lxqt.scm (libfm-qt): Update to 0.14.1.
[arguments]: Remove #:configure-flags.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng 3cc904ab7c
gnu: lxqt-themes: Update to 0.14.0.
* gnu/packages/lxqt.scm (lxqt-themes): Update to 0.14.0.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng 3b7348c4dc
gnu: lxqt-sudo: Update to 0.14.1.
* gnu/packages/lxqt.scm (lxqt-sudo): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng 536afd9bf2
gnu: lxqt-session: Update to 0.14.1.
* gnu/packages/lxqt.scm (lxqt-session): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng 1b8daca27b
gnu: lxqt-runner: Update to 0.14.1.
* gnu/packages/lxqt.scm (lxqt-runner): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng 63c80bd7a9
gnu: lxqt-qtplugin: Update to 0.14.0.
* gnu/packages/lxqt.scm (lxqt-qtplugin): Update to 0.14.0.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng 84dea9bb71
gnu: lxqt-powermanagement: Update to 0.14.1.
* gnu/packages/lxqt.scm (lxqt-powermanagement): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng 45ef5374a7
gnu: lxqt-policykit: Update to 0.14.1.
* gnu/packages/lxqt.scm (lxqt-policykit): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng c4a17525b9
gnu: lxqt-panel: Update to 0.14.1.
* gnu/packages/lxqt.scm (lxqt-panel): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng a728afb63b
gnu: lxqt-openssh-askpass: Update to 0.14.1.
* gnu/packages/lxqt.scm (lxqt-openssh-askpass): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng 4625cc66bf
gnu: lxqt-notificationd: Update to 0.14.1.
* gnu/packages/lxqt.scm (lxqt-notificationd): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng 39387425fd
gnu: lxqt-globalkeys: Update to 0.14.1.
* gnu/packages/lxqt.scm (lxqt-globalkeys): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng 2493df4404
gnu: lxqt-config: Update to 0.14.1.
* gnu/packages/lxqt.scm (lxqt-config): Update to 0.14.1.
[inputs]: Add eudev, libxi, xf86-input-libinput.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng 6a75a1a561
gnu: lxqt-admin: Update to 0.14.1.
* gnu/packages/lxqt.scm (lxqt-admin): Update to 0.14.1.
[arguments]: Remove #:configure-flags
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng f42b4080c3
gnu: lxqt-about: Update to 0.14.1.
* gnu/packages/lxqt.scm (lxqt-about): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng 4c3553ab41
gnu: libsysstat: Update to 0.4.2.
* gnu/packages/lxqt.scm (libsysstat): Update to 0.4.2.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng 9f87e52fbb
gnu: liblxqt: Update to 0.14.1.
* gnu/packages/lxqt.scm (liblxqt): Update to 0.14.1.
[arguments]: Remove #:configure-flags.  Add 'patch-translations-dir' phase.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng c1105c4bcf
gnu: libqtxdg: Update to 3.3.1.
* gnu/packages/lxqt.scm (libqtxdg): Update to 3.3.1.
[native-inputs]: Add lxqt-build-tools.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng 5b7a354d72
gnu: lxqt-build-tools: Update to 0.6.0.
* gnu/packages/lxqt.scm (lxqt-build-tools): Update to 0.6.0.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng d1d8235e45
gnu: libfm: Update to 1.3.1.
* gnu/packages/lxde.scm (libfm): Update to 1.3.1.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng a436a4919b
gnu: menu-cache: Update to 1.1.0.
* gnu/packages/lxde.scm (menu-cache): Update to 1.1.0.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:14 +01:00
Marius Bakke 8cc3983a4d
gnu: jasper: Update to 2.0.16.
* gnu/packages/image.scm (jasper): Update to 2.0.16.
2019-03-14 14:44:01 +01:00
Marius Bakke 22656b24d8
gnu: rapidjson: Update home page.
* gnu/packages/web.scm (rapidjson)[source, home-page]: Follow redirected URL.
2019-03-14 14:44:01 +01:00
Marius Bakke 84ff7821ff
gnu: samba: Update to 4.9.5.
* gnu/packages/samba.scm (samba): Update to 4.9.5.
2019-03-14 14:44:01 +01:00
Marius Bakke dd10c0adad
gnu: libzip: Update to 1.5.2.
* gnu/packages/compression.scm (libzip): Update to 1.5.2.
2019-03-14 14:44:00 +01:00
Marius Bakke 66fea0c4d9
gnu: libzip: Don't use NAME in source URI.
* gnu/packages/compression.scm (libzip)[source](uri): Hard-code NAME.
2019-03-14 14:44:00 +01:00
Marius Bakke 72663b4822
gnu: WebKitGTK: Update to 2.24.0.
* gnu/packages/webkit.scm (webkitgtk-2.22): Rename to ...
(webkitgtk-2.24): ... this.  Update to 2.24.0.
[inputs]: Add OPENJPEG.
* gnu/packages/gnome.scm (eolie, epiphany)[inputs]: Adjust accordingly.
* gnu/packages/web-browsers.scm (next-gtk-webkit)[inputs]: Likewise.
2019-03-14 14:44:00 +01:00
Marius Bakke eccaa8bf8d
gnu: libsoup: Update to 2.66.0.
* gnu/packages/gnome.scm (libsoup): Update to 2.66.0.
[build-system]: Change to MESON-BUILD-SYSTEM.
[arguments]: Adjust accordingly.
[native-inputs]: Add GTK-DOC.
[inputs]: Add MIT-KRB5.  Move SQLITE and LIBPSL ...
[propagated-inputs]: ... here.
2019-03-14 14:44:00 +01:00
Marius Bakke b165fe61dc
gnu: Kodi: Add Wayland variant.
* gnu/packages/kodi.scm (kodi/wayland): New public variable.
2019-03-14 14:44:00 +01:00
Marius Bakke 1f2e060148
gnu: Add waylandpp.
* gnu/packages/freedesktop.scm (waylandpp): New public variable.
2019-03-14 14:43:59 +01:00
Brett Gilio 209393a003
gnu: Add emacs-lsp-ui.
* gnu/packages/emacs-xyz.scm (emacs-lsp-ui): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-14 11:42:06 +01:00
Brett Gilio 60adaae0cf
gnu: Add emacs-lsp-mode.
* gnu/packages/emacs-xyz.scm (emacs-lsp-mode): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-14 11:40:07 +01:00
Brett Gilio 3490212a41
gnu: emacs-dash: Update to 2.15.0.
* gnu/packages/emacs-xyz.scm (emacs-dash): Update to 2.15.0.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-14 11:37:35 +01:00
Vagrant Cascadian 8cd10b22f9
gnu: Update dtc to 1.5.0.
* gnu/packages/bootloaders (dtc): Update to 1.5.0.
[native-inputs]: Add libyaml and pkg-config.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-14 11:02:40 +01:00
Meiyo Peng bb2f114de9
gnu: fish: Update to 3.0.2.
* gnu/packages/shells.scm (fish): Update to 3.0.2.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-14 11:01:11 +01:00
Nicolò Balzarotti 100f56024e
gnu: Add r-rematch2.
* gnu/packages/cran.scm (r-rematch2): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-14 10:54:49 +01:00
Leo Famulari 8a55c38915
gnu: w3m: Update to 0.5.3+git20190105.
* gnu/packages/w3m.scm (w3m): Update to 0.5.3+git20190105.
2019-03-13 20:06:15 -04:00
Ludovic Courtès b94c80ff5d
linux-container: 'containerized-operating-system' removes "useless" services.
Fixes <https://bugs.gnu.org/34211>.
Reported by Efraim Flashner <efraim@flashner.co.il>.

* gnu/system/linux-container.scm (containerized-operating-system)
[useless-services]: New variable.
Add 'services' field.
2019-03-13 23:12:44 +01:00
Ludovic Courtès 82f29e5b4f
installer: network: Adjust wording.
* gnu/installer/newt/network.scm (wait-service-online): Adjust wording
of the messages.
2019-03-13 23:12:43 +01:00
Ludovic Courtès 4cd386afae
linux-modules: Factorize 'missing-modules'.
* gnu/build/linux-modules.scm (missing-modules): New procedure.
* gnu/system/mapped-devices.scm (check-device-initrd-modules): Use it.
2019-03-13 23:12:43 +01:00
Ludovic Courtès 59e8044588
Remove traces of "GuixSD".
* gnu/bootloader/extlinux.scm (extlinux-configuration-file): Remove
mentions of "GuixSD".
* gnu/bootloader/grub.scm (install-grub-efi): Likewise.
* gnu/build/vm.scm (make-iso9660-image): Change default #:volume-id to
"Guix_image".
(initialize-hard-disk): Search for the "Guix_image" label.
* gnu/ci.scm (system-test-jobs, tarball-jobs): Remove "GuixSD".
* gnu/installer/newt/welcome.scm (run-welcome-page): Likewise.
* gnu/packages/audio.scm (supercollider)[description]: Likewise.
* gnu/packages/curl.scm (curl): Likewise.
* gnu/packages/emacs.scm (emacs): Likewise.
* gnu/packages/gnome.scm (network-manager): Likewise.
* gnu/packages/julia.scm (julia): Likewise.
* gnu/packages/linux.scm (alsa-plugins): Likewise.
(powertop, wireless-regdb): Likewise.
* gnu/packages/package-management.scm (guix): Likewise.
* gnu/packages/polkit.scm (polkit): Likewise.
* gnu/packages/tex.scm (texlive-bin): Likewise.
* gnu/services/base.scm (file-systems->fstab): Likewise.
* gnu/services/cups.scm (%cups-activation): Likewise.
* gnu/services/mail.scm (%dovecot-activation): Likewise.
* gnu/services/messaging.scm (prosody-configuration)[log]: Likewise.
* gnu/system/examples/vm-image.tmpl (vm-image-motd): Likewise.
* gnu/system/install.scm (installation-os)[file-systems]: Change root
file system label to "Guix_image".
* gnu/system/mapped-devices.scm (check-device-initrd-modules):
Remove "GuixSD".
* gnu/system/vm.scm (system-docker-image): Likewise.
(system-disk-image)[root-label]: Change to "Guix_image".
* gnu/tests/install.scm (run-install): Remove "GuixSD".
* guix/modules.scm (guix-module-name?): Likewise.
* nix/libstore/optimise-store.cc: Likewise.
2019-03-13 23:12:43 +01:00
Ricardo Wurmus fd4c7a098a
gnu: Add python-velocyto.
* gnu/packages/bioinformatics.scm (python-velocyto): New variable.
2019-03-13 22:48:53 +01:00
Ricardo Wurmus 55a0a3c853
gnu: python-loompy: Update to 2.0.17.
* gnu/packages/bioinformatics.scm (python-loompy): Update to 2.0.17.
[source]: Fetch via git.
[arguments]: Enable tests, replace "check" phase.
[propagated-inputs]: Add python-pandas.
[native-inputs]: Add python-pytest.
2019-03-13 22:48:52 +01:00
Oleg Pykhalov 1f058eced3
gnu: Add emacs-dockerfile-mode.
* gnu/packages/emacs-xyz.scm (emacs-dockerfile-mode): New variable.
2019-03-13 23:23:49 +03:00
Oleg Pykhalov 18964a6029
gnu: Add emacs-docker.
* gnu/packages/emacs-xyz.scm (emacs-docker): New variable.
2019-03-13 23:23:49 +03:00
Oleg Pykhalov 3899ae891c
gnu: Add emacs-docker-tramp.
* gnu/packages/emacs-xyz.scm (emacs-docker-tramp): New variable.
2019-03-13 23:23:49 +03:00
Ricardo Wurmus 7757e6d8b9
gnu: python-numba: Update to 0.42.0.
* gnu/packages/python-xyz.scm (python-numba): Update to 0.42.0.
2019-03-13 20:44:25 +01:00
Ricardo Wurmus f932540773
gnu: python-llvmlite: Update to 0.27.1.
* gnu/packages/llvm.scm (python-llvmlite): Update to 0.27.1.
[inputs]: Update patch for custom LLVM variant.
2019-03-13 20:43:55 +01:00
Ricardo Wurmus 6d37301bd5
gnu: Add python-on-guile.
* gnu/packages/guile-xyz.scm (python-on-guile): New variable.
2019-03-13 20:43:35 +01:00
Ricardo Wurmus 8f05252862
gnu: guile-persist: Install go files to canonical directory.
* gnu/packages/guile-xyz.scm (guile-persist)[arguments]: Patch target
directory for go files in build phase "patch-prefix".
2019-03-13 20:42:23 +01:00
Ricardo Wurmus 8318b3ed8c
gnu: guile-stis-parser: Install go files to canonical directory.
* gnu/packages/guile-xyz.scm (guile-stis-parser)[arguments]: Add build phase
"use-canonical-directory-for-go-files".
2019-03-13 20:41:41 +01:00
Ricardo Wurmus b9445d0b76
gnu: Add kaldi.
* gnu/packages/machine-learning.scm (kaldi): New variable.
2019-03-13 19:30:19 +01:00
Ricardo Wurmus a97796cd53
gnu: Add r-valr.
* gnu/packages/cran.scm (r-valr): New variable.
2019-03-13 17:19:58 +01:00
Ricardo Wurmus 4291f36a22
gnu: Add r-linnorm.
* gnu/packages/bioconductor.scm (r-linnorm): New variable.
2019-03-13 17:13:21 +01:00
Ricardo Wurmus 70daf82f28
gnu: Add python2-argparse.
* gnu/packages/python-xyz.scm (python2-argparse): New variable.
2019-03-13 17:11:09 +01:00
Ricardo Wurmus 3942bf5e4c
gnu: Add r-apcluster.
* gnu/packages/cran.scm (r-apcluster): New variable.
2019-03-13 17:10:53 +01:00
Ricardo Wurmus 51df43408b
gnu: Add r-gmodels.
* gnu/packages/cran.scm (r-gmodels): New variable.
2019-03-13 17:10:41 +01:00
Ricardo Wurmus 0b5d12ccdf
gnu: Add tetoolkit.
* gnu/packages/bioinformatics.scm (tetoolkit): New variable.
2019-03-13 15:14:10 +01:00
Ricardo Wurmus 984a8aa644
gnu: Add r-irkernel.
* gnu/packages/cran.scm (r-irkernel): New variable.
2019-03-13 14:26:45 +01:00
Ricardo Wurmus 664dedd524
gnu: Add r-irdisplay.
* gnu/packages/cran.scm (r-irdisplay): New variable.
2019-03-13 14:26:34 +01:00
Ricardo Wurmus d17186d626
gnu: Add r-repr.
* gnu/packages/cran.scm (r-repr): New variable.
2019-03-13 14:26:25 +01:00
Ricardo Wurmus f313baf0c8
gnu: Add r-pbdzmq.
* gnu/packages/cran.scm (r-pbdzmq): New variable.
2019-03-13 14:26:08 +01:00
Ricardo Wurmus 9475a248fc
gnu: Add r-illuminahumanmethylationepicmanifest.
* gnu/packages/bioconductor.scm (r-illuminahumanmethylationepicmanifest):
New variable.
2019-03-13 13:49:20 +01:00
Ricardo Wurmus 09605cb2d1
gnu: Add r-lumi.
* gnu/packages/bioconductor.scm (r-lumi): New variable.
2019-03-13 13:35:40 +01:00
Ricardo Wurmus 5ec5ba0272
gnu: Add r-methylumi.
* gnu/packages/bioconductor.scm (r-methylumi): New variable.
2019-03-13 13:35:33 +01:00
Ricardo Wurmus 0f5c9cec50
gnu: Add r-fdb-infiniummethylation-hg19.
* gnu/packages/bioconductor.scm (r-fdb-infiniummethylation-hg19): New variable.
2019-03-13 13:35:18 +01:00
Ricardo Wurmus 86fded86c2
gnu: portaudio: Build position independent code and install more headers.
* gnu/packages/audio.scm (portaudio)[arguments]: Pass "--with-pic" and
initialize libtool in new build phase "build-only-position-independent-code";
install extra header in new build phase "install-missing-headers".
2019-03-13 13:19:06 +01:00
Ricardo Wurmus 0fbaf1956b
gnu: Add r-minfi.
* gnu/packages/bioconductor.scm (r-minfi): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus 34a24f95ec
gnu: Add r-bumphunter.
* gnu/packages/bioconductor.scm (r-bumphunter): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus f4eac09653
gnu: Add r-siggenes.
* gnu/packages/bioconductor.scm (r-siggenes): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus eed6ff0358
gnu: Add r-illuminaio.
* gnu/packages/bioconductor.scm (r-illuminaio): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus f9201d6704
gnu: Add r-geoquery.
* gnu/packages/bioconductor.scm (r-geoquery): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus f088775799
gnu: Add r-scone.
* gnu/packages/bioconductor.scm (r-scone): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus b409c3570f
gnu: Add r-scdd.
* gnu/packages/bioconductor.scm (r-scdd): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus 6213e44185
gnu: Add r-noiseq.
* gnu/packages/bioconductor.scm (r-noiseq): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus 2d7627cfff
gnu: Add r-monocle.
* gnu/packages/bioconductor.scm (r-monocle): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus 925fcdbb79
gnu: Add r-mast.
* gnu/packages/bioconductor.scm (r-mast): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus 251e08301a
gnu: Add r-icobra.
* gnu/packages/bioconductor.scm (r-icobra): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus 648dbd2702
gnu: Add r-beanplot.
* gnu/packages/cran.scm (r-beanplot): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus 026dd77c63
gnu: Add r-nor1mix.
* gnu/packages/cran.scm (r-nor1mix): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus 30f53ec86d
gnu: Add r-ggextra.
* gnu/packages/cran.scm (r-ggextra): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus c27927dbf5
gnu: Add r-colourpicker.
* gnu/packages/cran.scm (r-colourpicker): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus 5146a24ece
gnu: Add r-shinyjs.
* gnu/packages/cran.scm (r-shinyjs): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus 849350fbce
gnu: Add r-shinybs.
* gnu/packages/cran.scm (r-shinybs): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus 704de8f5ee
gnu: Add r-ihw.
* gnu/packages/bioconductor.scm (r-ihw): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus 2cb71d81a4
gnu: Add r-lpsymphony.
* gnu/packages/bioconductor.scm (r-lpsymphony): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus 3087a2f37b
gnu: Add r-ebseq.
* gnu/packages/bioconductor.scm (r-ebseq): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus 7ed869f796
gnu: Add r-nbpseq.
* gnu/packages/bioconductor.scm (r-nbpseq): New variable.
2019-03-13 13:17:51 +01:00
Nicolas Goaziou 2b6ab17f7d
gnu: wireshark: Update to 3.0.0.
* gnu/packages/networking.scm (wireshark): Update to 3.0.0.
2019-03-13 12:31:13 +01:00
Tomáš Čech 77f3d30364
gnu: python-py3status: Update to 3.16.
* gnu/packages/python-xyz.scm (python-py3status): Update to 3.16.
2019-03-13 10:06:19 +01:00
Jack Hill 2f041a4cef
gnu: r-minpack-lm: Fix typo in description.
* gnu/packages/cran.scm (r-minpack-lm)[description]: Fix typo.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-03-13 00:37:11 -04:00
Nicolas Goaziou 0d5101c3a3
gnu: rosegarden: Update to 18.12.
* gnu/packages/music.scm (rosegarden): Update to 18.12.
[arguments]: Remove unused flag.
2019-03-12 23:58:52 +01:00
Nicolas Goaziou a269c89457
gnu: musescore: Update to 3.0.5.
* gnu/packages/music.scm (musescore): Update to 3.0.5.
2019-03-12 23:58:52 +01:00
Ludovic Courtès c9c51ac39a
Revert "packages: 'package-input-rewriting' can take a promise."
This reverts commit 7d2be1277b, which
turned out to be unhelpful for the problem at hand:

  https://lists.gnu.org/archive/html/guix-devel/2019-01/msg00486.html
2019-03-12 23:51:32 +01:00
Ricardo Wurmus 29e76f0722
gnu: guile-stis-parser: Override source file name.
* gnu/packages/guile-xyz.scm (guile-stis-parser)[source]: Provide file name
for git checkout.
2019-03-12 22:48:40 +01:00
Ricardo Wurmus 173c99601a
gnu: Add r-deds.
* gnu/packages/bioconductor.scm (r-deds): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus 5570804a69
gnu: Add r-zim.
* gnu/packages/cran.scm (r-zim): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus be0777ba86
gnu: Add r-penalized.
* gnu/packages/cran.scm (r-penalized): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus 4d1f19e02c
gnu: Add r-nonnest2.
* gnu/packages/cran.scm (r-nonnest2): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus ca3f13704a
gnu: Add r-lavaan.
* gnu/packages/cran.scm (r-lavaan): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus e8be5a0098
gnu: Add r-pbivnorm.
* gnu/packages/cran.scm (r-pbivnorm): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus 9e2ff342aa
gnu: Add r-msir.
* gnu/packages/cran.scm (r-msir): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus 01fe44cbdc
gnu: Add r-moments.
* gnu/packages/cran.scm (r-moments): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus 4fd994432f
gnu: Add r-minpack-lm.
* gnu/packages/cran.scm (r-minpack-lm): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus 061a4b6850
gnu: Add r-gamlss-dist.
* gnu/packages/cran.scm (r-gamlss-dist): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus c60e3e10f3
gnu: Add r-drimpute.
* gnu/packages/cran.scm (r-drimpute): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 5f673e2c1c
gnu: Add r-cobs.
* gnu/packages/cran.scm (r-cobs): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 5fde35b385
gnu: Add r-compositions.
* gnu/packages/cran.scm (r-compositions): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 7d779142ab
gnu: Add r-rarpack.
* gnu/packages/cran.scm (r-rarpack): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 262ab4b17c
gnu: Add r-tensora.
* gnu/packages/cran.scm (r-tensora): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 8cd3f49d46
gnu: Add r-bayesm.
* gnu/packages/cran.scm (r-bayesm): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 1901a53241
gnu: Add r-outliers.
* gnu/packages/cran.scm (r-outliers): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 4af186a963
gnu: Add r-upsetr.
* gnu/packages/cran.scm (r-upsetr): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus f3233beec5
gnu: Add r-blockmodeling.
* gnu/packages/cran.scm (r-blockmodeling): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus c691c607d7
gnu: Add r-dorng.
* gnu/packages/cran.scm (r-dorng): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 4dc2ecc279
gnu: r-qvalue: Move to (gnu packages bioconductor).
* gnu/packages/bioinformatics.scm (r-qvalue): Move from here...
* gnu/packages/bioconductor.scm (r-qvalue): ...to here.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 557a1089c6
gnu: Add r-hsmmsinglecell.
* gnu/packages/bioconductor.scm (r-hsmmsinglecell): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus 12d73f9c3c
gnu: Add guile-persist.
* gnu/packages/guile-xyz.scm (guile-persist): New variable.
2019-03-12 22:47:56 +01:00
Oleg Pykhalov e80a809f1f
gnu: Add tmux-xpanes.
* gnu/packages/tmux.scm (tmux-xpanes): New variable.
2019-03-12 22:41:31 +03:00
Brian Leung 94a33ab899
gnu: Add emacs-eshell-bookmark.
* gnu/packages/emacs-xyz.scm (emacs-eshell-bookmark): New variable.

Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-03-12 21:56:09 +03:00
Julien Lepiller 2ffec22eeb
gnu: python-pygit2: Update to 0.27.4.
* gnu/packages/python-xyz.scm (python-pygit2): Update to 0.27.4.
(python-pygit2)[arguments]: Disable tests.
2019-03-12 18:56:34 +01:00
Efraim Flashner 7458ceaca8
gnu: inxi-minimal: Declare source-file-name.
* gnu/packages/admin.scm (inxi-minimal)[source]: Add missing field.
2019-03-12 17:29:19 +02:00