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318 Commits

Author SHA1 Message Date
Ricardo Wurmus 4e10a22168 gnu: Add samtools 
* gnu/packages/bioinformatics.scm: New file
* gnu-system.am (GNU_SYSTEM_MODULES): Add it

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2014-12-13 00:01:06 +01:00
宋文武 62ac2ed9f4 gnu: Add gtk-xfce-engine. 
* gnu/packages/xfce.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-12-12 20:01:40 +08:00
Alex Kost 4a01b30b33 gnu: Move unclutter to (gnu packages xdisorg). 
* gnu/packages/unclutter.scm: Remove.
  (unclutter) Move to...
* gnu/packages/xdisorg.scm (unclutter): ... here.  New variable.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove unclutter file name.
 2014-12-10 00:37:47 +03:00
Alex Kost 1410f342f7 gnu: Move scrot to (gnu packages xdisorg). 
* gnu/packages/scrot.scm: Remove.
  (scrot) Move to...
* gnu/packages/xdisorg.scm (scrot): ... here.  New variable.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove scrot file name.
 2014-12-10 00:37:47 +03:00
Alex Kost 2e88e089da gnu: Add wmctrl. 
* gnu/packages/xdisorg.scm (wmctrl): New variable.
* gnu/packages/patches/wmctrl-64-fix.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2014-12-10 00:37:46 +03:00
Eric Bavier 3e4249ce10 gnu: Add llvm and clang. 
* gnu/packages/llvm.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-12-09 12:02:08 -06:00
Eric Bavier 8d809faf8c gnu: Add delta. 
* gnu/packages/debug.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-12-09 12:02:08 -06:00
Ludovic Courtès 6005bd0700 build: Make sure the installed 'config.go' is newer than 'config.scm'. 
Fixes <http://bugs.gnu.org/19317>.
Reported by rekado <rekado@elephly.net>.

* gnu-system.am (install-data-hook): Rename to...
  (set-bootstrap-executable-permissions): ... this.
* Makefile.am (install-data-hook): New target.
 2014-12-09 11:44:21 +01:00
Ludovic Courtès f6d9b3ded7 gnu: Add socat. 
* gnu/packages/socat.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-12-08 23:29:23 +01:00
Ludovic Courtès 6036453fff gnu: Add libyubikey and ykclient. 
* gnu/packages/yubico.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-12-07 00:02:43 +01:00
Ludovic Courtès 36d2a3afeb gnu: glib: Work around unreliable GIO test. 
Fixes <http://bugs.gnu.org/18445>.

* gnu/packages/patches/glib-tests-gapplication.patch: New file
* gnu/packages/glib.scm (glib)[source]: Add it.
* gnu-system.am (dist_patch_DATA): Add it.
 2014-12-03 22:52:19 +01:00
John Darrington 1567bb1976 gnu: Add tre (including the agrep utility) 
* gnu/packages/tre.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-12-03 11:14:57 +01:00
Eric Bavier f4c4513d47 gnu: Add gourmet. 
* gnu/packages/nutrition.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-12-02 08:35:06 -06:00
Eric Bavier a1de06b6ab gnu: Add python-pygobject. 
* gnu/packages/patches/python2-pygobject-2-gi-info-type-error-domain.patch:
  New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/glib.scm (python-pygobject, python2-pygobject-2): New
  variables.
 2014-12-02 08:35:06 -06:00
Eric Bavier b88e1b0a62 gnu: python: Add sqlite input. 
* gnu/packages/patches/python-sqlite-3.8.4-test-fix.patch,
  gnu/packages/patches/python2-sqlite-3.8.4-test-fix.patch: New patches.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/python.scm (python-2)[source]: Add patch.
  [inputs]: Add sqlite.
  (python)[source]: Add patch.
 2014-12-02 08:33:31 -06:00
John Darrington 3c156c8a94 gnu: move xorg to xdisorg 
* gnu/packages/xorg.scm (xeyes, pixman, libdrm, libdrm-2.4.33, mtdev):
  Move to ...
* gnu/packages/xdisorg.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-12-02 15:13:10 +01:00
Taylan Ulrich B 2184ed9179 gnu: Add mg. 
* gnu/packages/mg.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add mg.scm.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2014-11-29 22:34:59 +01:00
Ludovic Courtès fcaa5f44a1 system: Add (gnu build linux-modules). 
* gnu/build/linux-modules.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-11-28 00:10:28 +01:00
Ludovic Courtès 598e19dca1 system: Build system-wide locale definitions. 
* gnu/system/locale.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
* gnu/system.scm (<operating-system>)[locale]: Change the default to
  "en_US.utf8".
  (operating-system-locale-directory): New procecure.
  (operating-system-derivation): Use it.
* doc/guix.texi (Using the Configuration System): Change example locale
  to "fr_FR.utf8".
  (operating-system Reference): Add xref to "Locales".  Document
  'locale-definitions'.
  (Locales): New section.
* po/guix/POTFILES.in: Add gnu/system.scm.
 2014-11-27 08:55:46 +01:00
Andreas Enge bc0b89bb3e gnu: xf86-video-openchrome: Patch to correct build failure. 
* gnu/packages/xorg.scm (xf86-video-openchrome): Add patch for build failure
    with glibc-2.20. Fixes bug #18740.
* gnu/packages/patches/xf86-video-openchrome-includes.patch: New file.
* gnu-system.am (dist_patch_DATA): Register patch.
 2014-11-23 15:46:06 +01:00
Manolis Ragkousis a5b60e3c6b gnu: Add AVR-Libc. 
* gnu/packages/avr.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add avr.scm.
* gnu/packages/cross-base.scm (xgcc-avr): New variable.
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add case for
  "avr".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2014-11-21 23:30:27 +01:00
Andreas Enge 8c3fc83411 gnu: icu4c: Update to 54.1. 
* gnu/packages/icu4c.scm (icu4c): Update to 54.1.
* gnu/packages/patches/icu4c-test-date-format.patch: Remove unneeded patch.
* gnu-system.am (dist_patch_DATA): Unregister dropped patch.
 2014-11-20 14:01:20 +01:00
宋文武 8f9580ca8b gnu: Add Wine. 
* gnu/packages/wine.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2014-11-18 22:30:09 +01:00
Julien Lepiller 7131ef4b4a gnu: Add Openbox. 
* gnu/packages/openbox.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2014-11-18 21:59:10 +01:00
David Thompson 6e206ac788 gnu: Add minetest. 
* gnu/packages/patches/minetest-subgame-env-var.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/games.scm (minetest): New variable.
 2014-11-16 19:02:24 -05:00
Ludovic Courtès 5dee9acf53 gnu: gnutls: Update to 3.2.20--this fixes CVE-2014-8564. 
* gnu/packages/patches/gnutls-server-name-fix.patch: Remove.
* gnu-system.am (dist_patch_DATA): Adjust accordingly.
* gnu/packages/gnutls.scm (gnutls): Update to 3.2.20.
  Remove 'patches' field.
 2014-11-12 23:56:28 +01:00
Ludovic Courtès 84dfb45821 gnu: Introduce (gnu artwork) module. 
* gnu/artwork.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
* gnu/services/xorg.scm: Use it.
  (%artwork-repository): Remove.
* gnu/system/grub.scm: Use it.
  (%artwork-repository): Remove.
 2014-11-12 14:28:36 +01:00
Ludovic Courtès 1306b0b003 gnu: cross-base: Apply Qualcomm's patches for Binutils and GCC. 
This fixes compilation of the ath9k-htc firmware.  Before that, loading
it would result in "Target is unresponsive".  The patches come from
the ath9k-htc firmware source.

* gnu/packages/patches/ath9k-htc-firmware-binutils.patch,
  gnu/packages/patches/ath9k-htc-firmware-gcc.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/cross-base.scm (package-with-patch): New procedure.
  (cross-binutils): Check whether TARGET starts with "xtensa-", and call
  'package-with-patch' when it does.
  (cross-gcc-patches): New procedure.
  (cross-gcc): Use it to add patches.
 2014-11-11 22:36:49 +01:00
Andreas Enge c4bd2aca00 gnu: Add polkit. 
* gnu/packages/polkit.scm (polkit): New variable.
* gnu/packages/patches/polkit-drop-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Register patch file.
 2014-11-09 18:55:31 +01:00
Andreas Enge cff1c5c1c6 gnu: Add mozjs (Mozilla Spidermonkey). 
* gnu/packages/polkit.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Register new file.
 2014-11-08 13:24:21 +01:00
Ludovic Courtès 342005e7e3 gnu: Add GNU adns. 
* gnu/packages/adns.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-11-04 18:59:25 +01:00
Ludovic Courtès 83aabfbcc6 gnu: Add GPSBabel. 
* gnu/packages/gps.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-10-29 14:58:31 +01:00
Ludovic Courtès 4902c3ecc6 gnu: Add ath9k-htc-firmware. 
* gnu/packages/firmware.scm: New file.
* gnu/packages/patches/ath9k-htc-firmware-objcopy.patch: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add 'firmware.scm'.
  (dist_patch_DATA): Add the patch.
 2014-10-29 00:31:23 +01:00
John Darrington eeb3703db5 gnu: Add miscfiles 
* gnu/packages/miscfiles.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-10-27 11:17:21 +01:00
Mark H Weaver 1d1efa6c6a gnu: pulseaudio: Fix CVE-2014-3970 and intermittent test failures. 
* gnu/packages/patches/pulseaudio-CVE-2014-397.patch: New file.
* gnu/packages/patches/pulseaudio-fix-mult-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/pulseaudio.scm (pulseaudio): Add patches.
 2014-10-26 02:55:38 -04:00
Mark H Weaver 388fd01b02 gnu: emacs: Update to 24.4. 
* gnu/packages/patches/emacs-configure-sh.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/emacs.scm (emacs): Update to 24.4.  Add 'acl' as input.
  Remove --with-crt-dir configure option.
  (emacs-no-x-toolkit): Add 'inotify-tools' as input.  Adjust to cope
  with the lack of configure-flags in the main 'emacs' package.
 2014-10-21 00:07:31 -04:00
Eric Bavier 1454a2ba88 gnu: ccache: Upgrade to 3.1.10. 
* gnu/packages/ccache.scm (ccache): Upgrade to 3.1.10.
  [source]: Remove patches.
* gnu/packages/patches/ccache-stdc-predef-test.patch: Delete patch.
* gnu-system.am (dist_patch_DATA): Remove it.
 2014-10-20 16:49:32 -05:00
John Darrington 45c151d9b4 gnu: Add sane-backends 
* gnu/packages/scanner.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-10-20 18:13:36 +02:00
John Darrington d99e12d247 gnu: Add ntp 
* gnu/packages/ntp.scm: New file.
* gnu-system.am (gnu/packages/ntp.scm): Add it.
 2014-10-19 10:03:34 +02:00
Ludovic Courtès 51861587c6 gnu: gnutls: Patch bug in 'set-session-server-name!'. 
* gnu/packages/patches/gnutls-server-name-fix.patch: New file.
* gnu/packages/gnutls.scm (gnutls)[source]: Use it.
* gnu-system.am (dist_patch_DATA): Add it.
 2014-10-14 23:09:07 +02:00
Mark H Weaver 1b7d5242c3 gnu: libarchive: Apply fixes including for CVE-2013-0211. 
* gnu/packages/patches/libarchive-CVE-2013-0211.patch,
  gnu/packages/patches/libarchive-fix-lzo-test-case.patch,
  gnu/packages/patches/libarchive-mtree-filename-length-fix.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/backup.scm (libarchive)[source]: Add patches.
 2014-10-11 23:21:37 -04:00
Eric Bavier b3f3fb825e gnu: Add xfig. 
* gnu/packages/xfig.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-10-11 21:11:23 -05:00
Ludovic Courtès 177088a3f3 gnu: net-tools: Allow compilation with current libc and GCC. 
* gnu/packages/patches/net-tools-bitrot.patch: New file.
* gnu/packages/linux.scm (net-tools): Use it.
* gnu-system.am (dist_patch_DATA): Add it.
 2014-10-06 23:11:41 +02:00
Ian Denhardt b0d1f10b5e gnu: Add feh. 
* gnu/packages/feh.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2014-10-06 09:57:13 +02:00
Mark H Weaver f410c11076 gnu: xpdf: Update to 3.04. 
* gnu/packages/patches/xpdf-constchar.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/pdf.scm (xpdf): Update to 3.04.  Remove patch.
  Add libpng as an input.
 2014-10-05 22:39:37 -04:00
Manolis Ragkousis 2a9a4fb8b7 gnu: Add dfu-programmer 
* gnu/packages/flashing-tools.scm (dfu-programmer): New variable.
* gnu/packages/patches/dfu-programmer-fix-libusb.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2014-10-02 10:46:29 +02:00
Manolis Ragkousis eff5f452b0 gnu: Move flashrom and avrdude to (gnu packages flashing-tools). 
* gnu/packages/admin.scm (flashrom): Move this and...
* gnu/packages/avrdude.scm (avrdude): ... this to...
* gnu/packages/flashing-tools.scm: ... this. New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2014-09-30 13:38:01 +02:00
Alex Kost e596ab0f24 gnu: Move giflib to (gnu packages image). 
* gnu/packages/giflib.scm: Remove.  Move the contents to (gnu packages image).
* gnu-system.am (GNU_SYSTEM_MODULES): Remove giflib file name.
* gnu/packages/emacs.scm: Remove giflib module name.
* gnu/packages/image.scm (giflib): New variable.
 2014-09-30 08:50:35 +04:00
Ludovic Courtès 6602576e84 gnu: guile-ncurses: Update to 1.5. 
* gnu/packages/guile.scm (guile-ncurses): Update to 1.5.  Remove patch.
* gnu/packages/patches/guile-ncurses-tests.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove it.
 2014-09-29 23:17:53 +02:00
Eric Bavier b5f4bb855d gnu: Add synergy. 
* gnu/packages/synergy.scm: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
 2014-09-29 09:40:31 -05:00