Commit Graph

32554 Commits

Author SHA1 Message Date
Tobias Geerinckx-Rice ff0e1eed32
gnu: plzip: Update to 1.8.
* gnu/packages/compression.scm (plzip): Update to 1.8.
2019-02-12 17:38:22 +01:00
Tobias Geerinckx-Rice 894669a787
gnu: plzip: Don't use NAME in source URI.
* gnu/packages/compression.scm (plzip)[source]: Hard-code NAME.
2019-02-12 17:38:22 +01:00
Tobias Geerinckx-Rice b099b4a75a
gnu: lziprecover: Update to 1.21.
* gnu/packages/compression.scm (lziprecover): Update to 1.21.
2019-02-12 17:38:22 +01:00
Tobias Geerinckx-Rice f6145bb652
gnu: lziprecover: Don't use NAME in source URI.
* gnu/packages/compression.scm (lziprecover)[source]: Hard-code NAME.
2019-02-12 17:38:22 +01:00
Tobias Geerinckx-Rice da93d42413
gnu: perl-dbi: Update to 1.642.
* gnu/packages/databases.scm (perl-dbi): Update to 1.642.
2019-02-12 17:38:21 +01:00
Tobias Geerinckx-Rice 245e7a68e7
gnu: kyotocabinet: Update to 1.2.77.
* gnu/packages/databases.scm (kyotocabinet): Update to 1.2.77.
2019-02-12 17:38:21 +01:00
Tobias Geerinckx-Rice e9bdef5fb4
gnu: os-prober: Update to 1.77.
* gnu/packages/bootloaders.scm (os-prober): Update to 1.77.
2019-02-12 17:38:21 +01:00
Tobias Geerinckx-Rice 51a8fc8b42
gnu: feh: Update to 3.1.2.
* gnu/packages/image-viewers.scm (feh): Update to 3.1.2.
2019-02-12 17:38:21 +01:00
Maxim Cournoyer 155194d97d
gnu: python-pybedtools: Update to 0.8.0 and fix build.
From 40db2b4eae5ca61a3134cdaf7b156ed1ae9f7415 Mon Sep 17 00:00:00 2001
From: Maxim Cournoyer <maxim.cournoyer@gmail.com>
Date: Sun, 10 Feb 2019 23:39:25 -0500
Subject: [PATCH] gnu: python-pybedtools: Update to 0.8.0 and fix build.

* gnu/packages/bioinformatics.scm (python-pybedtools): Update to 0.8.0.
[phases]{disable-broken-tests}: Do not disable "test_issue_157" and
"test_to_dataframe" tests.  Disable the "test_getting_example_beds".
{remove-cython-generated-files}: Add phase.
{generate-cython-extensions}: Add phase.
{check}: Move from python2-pybedtools to here.  Add a scripts
subdirectory of the build directory to the PATH, so that the tests can call
them.  Invoke pytest rather than nosetests.
[modules]: Move from python2-pybedtools to here.
[propagated-inputs]: Depend on the current BEDTOOLS rather than version 1.26.
[native-inputs]: Replace python-nose by python-pytest and add python-psutil.
2019-02-12 17:16:05 +01:00
Efraim Flashner b856a78c94
gnu: efilinux: Set ARCH variable on some architectures.
Even with this patch efilinux does not build for arm*.

* gnu/packages/efi.scm (efilinux)[arguments]: On armhf-linux and
aarch64-linux set the ARCH variable apropriately.
2019-02-12 18:08:19 +02:00
Ricardo Wurmus 385d7546e1
gnu: Add cnvkit.
* gnu/packages/bioinformatics.scm (cnvkit): New variable.
2019-02-12 15:41:02 +01:00
Ricardo Wurmus c18dccffa2
gnu: Add r-dnacopy.
* gnu/packages/bioconductor.scm (r-dnacopy): New variable.
2019-02-12 15:41:02 +01:00
Ricardo Wurmus ab61ce3730
gnu: python-reportlab: Update to 3.5.13.
* gnu/packages/pdf.scm (python-reportlab): Update to 3.5.13.
[inputs]: Add freetype.
2019-02-12 15:40:58 +01:00
Efraim Flashner c86b5f1b9b
gnu: glibc@2.27: fix CVE-2018-11236, CVE-2018-11237.
* gnu/packages/base.scm (glibc@2.27)[sources]: Add patches.
[properties]: New field, mark CVE-2017-18269 fixed.
* gnu/packages/patches/glibc-CVE-2018-11236.patch,
gnu/packages/patches/glibc-CVE-2018-11237.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
2019-02-12 09:08:13 +02:00
Tobias Geerinckx-Rice d4c95a237c
gnu: parallel: Update to 20190122.
* gnu/packages/parallel.scm (parallel): Update to 20190122.
2019-02-12 02:33:55 +01:00
Tobias Geerinckx-Rice a661af5c9a
gnu: maven-resolver-api: Don't use unstable tarball.
* gnu/packages/maven.scm (maven-resolver-api)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-12 02:33:55 +01:00
Tobias Geerinckx-Rice 57e3f06bbd
gnu: multipath-tools: Update to 0.7.9.
* gnu/packages/linux.scm (multipath-tools): Update to 0.7.9.
2019-02-12 02:33:55 +01:00
Tobias Geerinckx-Rice 34920d2adf
gnu: websockify: Don't use unstable tarball.
* gnu/packages/web.scm (websockify)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-12 02:33:55 +01:00
Tobias Geerinckx-Rice 2772debc74
gnu: libyajl: Don't use unstable tarball.
* gnu/packages/web.scm (libyajl)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-12 02:33:54 +01:00
Tobias Geerinckx-Rice 3e3414efd4
gnu: rapidjson: Don't use unstable tarball.
* gnu/packages/web.scm (rapidjson)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-12 02:33:54 +01:00
Tobias Geerinckx-Rice 082504addf
gnu: qjson: Don't use unstable tarball.
* gnu/packages/web.scm (qjson)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-12 02:33:54 +01:00
Tobias Geerinckx-Rice 20ab34c16f
gnu: fcgiwrap: Don't use unstable tarball.
* gnu/packages/web.scm (fcgiwrap)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-12 02:33:54 +01:00
Tobias Geerinckx-Rice bff44abb14
gnu: mod-wsgi: Don't use unstable tarball.
* gnu/packages/web.scm (mod-wsgi)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-12 02:33:53 +01:00
Leo Famulari 95c910f499
gnu: Guix: Update snapshot to 0.16.0-10.2637cfd.
Fixes <https://bugs.gnu.org/34444>.

*  gnu/packages/package-management.scm (guix): Update to 0.16.0-10.2637cfd.
2019-02-11 18:13:29 -05:00
Ricardo Wurmus 8d11b6ddb8
gnu: guile-picture-language: Update to 0-2.1ea8b78.
* gnu/packages/guile-xyz.scm (guile-picture-language): Update to 0-2.1ea8b78.
2019-02-11 23:03:35 +01:00
Vagrant Cascadian 75d12c40f7
gnu: disorderfs: Update to 0.5.6.
* gnu/packages/file-systems (disorderfs): Update to 0.5.6.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-02-11 16:54:37 -05:00
Vagrant Cascadian 295de8cc1a
gnu: diffoscope: Update to 111.
* gnu/packages/package-management (diffoscope): Update to 111.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-02-11 16:54:37 -05:00
Andreas Enge fa8ffaa0df
gnu: python-cython: Update to 0.29.5.
* gnu/packages/python-xyz.scm (python-cython): Update to 0.29.5.
2019-02-11 21:20:41 +01:00
Marius Bakke c8b69863eb
gnu: pixman: Update source URI.
* gnu/packages/xdisorg.scm (pixman)[source](uri): Use HTTPS.
2019-02-11 19:20:55 +01:00
Marius Bakke 93617188d9
gnu: python-django: Update to 1.11.20 [fixes CVE-2019-6975].
* gnu/packages/django.scm (python-django): Update to 1.11.20.
2019-02-11 19:20:55 +01:00
Marius Bakke c508c06573
gnu: ffmpeg: Update to 4.1.1.
* gnu/packages/video.scm (ffmpeg): Update to 4.1.1.
2019-02-11 19:20:55 +01:00
Marius Bakke b861fc157c
gnu: miniupnpc: Update to 2.1.20190210.
* gnu/packages/upnp.scm (miniupnpc): Update to 2.1.20190210.
2019-02-11 19:20:55 +01:00
Marius Bakke a2467954b8
gnu: lv2: Update to 1.16.0.
* gnu/packages/audio.scm (lv2): Update to 1.16.0.
[arguments]: Remove #:python.
(lv2-devel): Remove variable.
* gnu/packages/music.scm (ingen)[inputs]: Change LV2-DEVEL to LV2.
2019-02-11 19:20:55 +01:00
Danny Milosavljevic 86b2ab8f5b
gnu: vlc: Use libvpx-1.7.
Fixes <https://bugs.gnu.org/34439>.

* gnu/packages/video.scm (vlc)[inputs]: Remove libvpx.  Add libvpx-1.7.
2019-02-11 18:48:42 +01:00
Kei Kebreau df56098220
gnu: gama: Update to 2.03.
* gnu/packages/gps.scm (gama): Update to 2.03.
2019-02-11 05:49:19 -05:00
Vagrant Cascadian 4a14ee9127
gnu: gloox: Update to 1.0.22.
* gnu/packages/messaging.scm (gloox): Update to 1.0.22.
2019-02-11 11:12:27 +01:00
Vagrant Cascadian 37da5813e9
gnu: python-ecpy: Update to 0.10.0.
* gnu/packages/python-crypto.scm (python-ecpy): Update to 0.10.0.
2019-02-11 11:08:40 +01:00
Vagrant Cascadian a62887d30d
gnu: python-pycryptodome: Update to 3.7.3.
* gnu/packages/python-crypto (python-cryptodome): Update to 3.7.3.
2019-02-11 11:04:44 +01:00
Vagrant Cascadian 6e2bad000f
gnu: u-boot-novena: Allow booting from raw device offset.
* gnu/packages/bootloaders.scm (u-boot-novena): Disable loading u-boot.img
from a partition.
2019-02-11 10:59:23 +01:00
Vagrant Cascadian 8d22f7e31f
gnu: Add python-pymsgbox.
* gnu/packages/python-xyz.scm (python-pymsgbox): New variable.
2019-02-11 10:51:11 +01:00
Vagrant Cascadian a336334196
gnu: Add python-daemon.
* gnu/packages/python-xyz.scm (python-daemon): New variable.
2019-02-11 10:37:54 +01:00
Leo Famulari f5c46fa0d0
gnu: dmenu: Update to 4.9.
* gnu/packages/suckless.scm (dmenu): Update to 4.9.
2019-02-11 02:41:26 -05:00
Leo Famulari d561243917
gnu: Dropbear: Add a comment about bundled libraries.
* gnu/packages/ssh.scm (dropbear): Comment.
2019-02-10 23:03:57 -05:00
Leo Famulari 8f9c5aa3ba
gnu: curl: Update to 7.64.0 [fixes CVE-2018-16890 and CVE-2019-{3822,3823}].
* gnu/packages/curl.scm (curl)[replacement]: New field.
(curl-7.64.0): New variable.
2019-02-10 22:03:50 -05:00
Leo Famulari c03b355fa7
gnu: Dovecot: Update to 2.3.4.1 [fixes CVE-2019-3814].
* gnu/packages/mail.scm (dovecot): Update to 2.3.4.1.
2019-02-10 22:03:50 -05:00
Leo Famulari f6e64282b4
gnu: Syncthing: Update to 1.0.1.
* gnu/packages/syncthing.scm (syncthing): Update to 1.0.1.
2019-02-10 21:38:07 -05:00
Leo Famulari f52bd828ed
gnu: MPD: Update to 0.21.4.
We no longer install any systemd unit files for MPD because this is no longer
supported upstream as a matter of policy or via MPD's build system. [0]

Specifically, they don't support using MPD with systemd unless MPD was linked
with libsystemd. The unit files are only built when this is the case.

[0]
<https://github.com/MusicPlayerDaemon/MPD/issues/124#issuecomment-334930456>

* gnu/packages/mpd.scm (mpd): Update to 0.21.4.
[build-system]: Use meson-build-system.
[native-inputs]: Add gcc-8, gcc-8:lib, and python-sphinx.
[arguments]: Add a 'expand-C++-include-path' phase. Remove the
'install-service-files' phase. Make sure to build the documentation.
2019-02-10 20:21:53 -05:00
Ludovic Courtès a76d0f032b
gnu: gnome-shell: Customize the GDM log-in screen.
* gnu/packages/patches/gnome-shell-theme.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnome.scm (gnome-shell)[source](patches, modules)
(snippet): New fields.
[arguments]: Add 'rebuild-css' phase.
[native-inputs]: Add RUBY-SASS.
2019-02-10 23:25:01 +01:00
Ludovic Courtès 44a06c942c
gnu: gnome: Remove '--disable-acceleration-check' flag from 'gnome.desktop'.
With this change the GNOME session is now listed in the log-in screen of
GDM.

* gnu/packages/gnome.scm (gnome-session)[arguments]: Remove
'disable-hardware-acceleration-check' phase.  That phase was apparently
no longer needed.  Furthermore, GDM expects 'TryExec' to be a file name,
not a file name followed by arguments; thus, the option led GDM to
discard 'gnome.desktop' with "GdmSession: Command not found: TryExec".
2019-02-10 23:25:01 +01:00
Ludovic Courtès b717d0f90e
gnu: qtwebkit: Build sequentially.
Fixes <https://bugs.gnu.org/34062>.

* gnu/packages/qt.scm (qtwebkit)[arguments]: Add #:parallel-build? #f.
2019-02-10 23:25:01 +01:00
Gabriel Hondet 2356b7ab6d
gnu: Add ghc-stylish-haskell.
* gnu/packages/haskell.scm (ghc-stylish-haskell): New variable.
2019-02-10 21:47:24 +01:00
Gabriel Hondet d4ce1c5029
gnu: Add ghc-base-unicode-symbols.
* gnu/packages/haskell.scm (ghc-base-unicode-symbols): New variable.
2019-02-10 21:45:04 +01:00
Gabriel Hondet 3fc88ff0f3
gnu: Add ghc-alsa-core.
* gnu/packages/haskell.scm (ghc-alsa-core): New variable.
2019-02-10 21:30:32 +01:00
Vagrant Cascadian 8c16b8a40c
gnu: python-trezor: Update to 0.11.1.
* gnu/packages/finance.scm (python-trezor): Update to 0.11.1.
[arguments]: Remove obsolete "slow_cosi" test.
Delete "test_tx_api" test, which requires network access.
[propagated-inputs]: Add python-construct and python-typing-extensions,
Remove python-hidapi, python-protobuf and python-typing.
[native-inputs]: Remove python-mock, Add protobuf, python-black,
python-protobuf and python-isort.
2019-02-10 20:41:59 +01:00
Vagrant Cascadian f98232a39e
gnu: Add python-construct.
* gnu/packages/python-xyz.scm (python-construct): New variable.
2019-02-10 20:40:25 +01:00
Vagrant Cascadian f89d443be1
gnu: Add python-typing-extensions.
* gnu/packages/python-xyz.scm (python-typing-extensions): New variable.
2019-02-10 20:37:10 +01:00
Vagrant Cascadian 02d9e5d285
gnu: python-keepkey: Update to 6.0.2.
* gnu/packages/finance.scm (python-keepkey): Update to 6.0.2.
[propagated-inputs]: Add python-libusb1.
2019-02-10 20:30:52 +01:00
Vagrant Cascadian 4e86e9d78e
gnu: electron-cash: Update to 3.3.5.
* gnu/packages/finance.scm (electron-cash): Update to 3.3.5.
[source]: Update uri.
2019-02-10 20:30:28 +01:00
Tobias Geerinckx-Rice b05bc3c487
gnu: java-xstream: Don't use unstable tarball.
* gnu/packages/xml.scm (java-xstream)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-10 17:45:41 +01:00
Tobias Geerinckx-Rice eed5e162ad
gnu: java-xom: Don't use unstable tarball.
* gnu/packages/xml.scm (java-xom)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
[arguments]: Add 'make-git-checkout-writable' phase.
2019-02-10 17:45:41 +01:00
Tobias Geerinckx-Rice a4b96726b5
gnu: java-jettison: Don't use unstable tarball.
* gnu/packages/xml.scm (java-jettison)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-10 17:45:41 +01:00
Tobias Geerinckx-Rice 4bad4fbdf8
gnu: tinyxml2: Don't use unstable tarball.
* gnu/packages/xml.scm (tinyxml2)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-10 17:45:40 +01:00
Tobias Geerinckx-Rice 951bdf5adf
gnu: java-jdom2: Don't use unstable tarball.
* gnu/packages/xml.scm (java-jdom2)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-10 17:45:40 +01:00
Tobias Geerinckx-Rice 00fc938983
gnu: java-kxml2: Don't use unstable tarball.
* gnu/packages/xml.scm (java-kxml2)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
[arguments]: Add 'make-git-checkout-writable' phase.
2019-02-10 17:45:40 +01:00
Tobias Geerinckx-Rice 9d67052661
gnu: java-dom4j: Don't use unstable tarball.
* gnu/packages/xml.scm (java-dom4j)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-10 17:45:39 +01:00
Tobias Geerinckx-Rice ef6a5fcc30
gnu: java-groovy-bootstrap: Don't use unstable tarball.
* gnu/packages/groovy.scm (java-groovy-bootstrap)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-10 17:45:39 +01:00
Tobias Geerinckx-Rice 3047c7baae
gnu: xlsx2csv: Don't use unstable tarball.
* gnu/packages/xml.scm (xlsx2csv)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-10 17:45:39 +01:00
Tobias Geerinckx-Rice 3255fc3bfe
gnu: xlsx2csv: Update to 0.7.4.
* gnu/packages/xml.scm (xlsx2csv): Update to 0.7.4.
2019-02-10 17:45:39 +01:00
Tobias Geerinckx-Rice 99631313e2
gnu: clojure-tools-macro: Don't use unstable tarball.
* gnu/packages/clojure.scm (clojure-tools-macro)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-10 17:45:38 +01:00
Tobias Geerinckx-Rice 62dbf78b65
gnu: clojure-algo-monads: Don't use unstable tarball.
* gnu/packages/clojure.scm (clojure-algo-monads)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-10 17:45:38 +01:00
Tobias Geerinckx-Rice 85e0827d90
gnu: clojure-algo-generic: Don't use unstable tarball.
* gnu/packages/clojure.scm (clojure-algo-generic)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-10 17:45:38 +01:00
Tobias Geerinckx-Rice fba9a66095
gnu: xinetd: Don't use unstable tarball.
* gnu/packages/web.scm (xinetd)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-10 17:45:38 +01:00
Mark H Weaver 1d5be0b61c
gnu: linux-libre@4.4: Update to 4.4.174.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.174.
2019-02-09 23:01:12 -05:00
Nicolas Goaziou 2becddeb0c
gnu: emacs-pdf-tools: Update to 0.90.
* gnu/packages/emacs-xyz.scm (emacs-pdf-tools): Update to 0.90.
[source]: Remove patch.
* gnu/packages/patches/emacs-pdf-tools-poppler.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove reference to deleted file.
2019-02-09 23:30:13 +01:00
Vagrant Cascadian 81d59f4425
gnu: electrum: Update to 3.3.3.
* gnu/packages/finance.scm (electrum): Update to 3.3.3.
  [inputs]: Add python-aiohttp, python-aiohttp-socks, python-aiorpcx and
    python-certifi.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-02-09 23:27:12 +01:00
Vagrant Cascadian 93d3360ab0
gnu: Add python-aiorpcx.
* gnu/packages/python-web.scm (python-aiorpcx): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-02-09 23:27:12 +01:00
Vagrant Cascadian 20310a7e92
gnu: Add python-aiohttp-socks.
* gnu/packages/python-web.scm (python-aiohttp-socks): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-02-09 23:27:12 +01:00
Rutger Helling 64b632f861
gnu: lookingglass: Build with spice-protocol@0.12.14.
* gnu/packages/virtualization.scm (lookingglass)[inputs]: Use
spice-protocol@0.12.14 instead of spice-protocol.
2019-02-09 22:23:14 +01:00
Rutger Helling 44ad1c16e2
gnu: Add spice-protocol@0.12.14.
* gnu/packages/spice.scm (spice-protocol@0.12.14): New variable.
2019-02-09 22:23:14 +01:00
Marius Bakke aefa29123f
gnu: python-pytest: Update home page.
* gnu/packages/check.scm (python-pytest)[home-page]: Follow redirects to
https://docs.pytest.org/en/latest/.
2019-02-09 21:07:37 +01:00
Marius Bakke 809f003f15
gnu: python-configparser: Update home page.
* gnu/packages/python-xyz.scm (python-configparser)[home-page]: Set to source
repository.
2019-02-09 21:07:37 +01:00
Marius Bakke 2c7a28ecce
gnu: notmuch: Update to 0.28.1.
* gnu/packages/mail.scm (notmuch): Update to 0.28.1.
2019-02-09 20:58:16 +01:00
Marius Bakke 44ed628466
gnu: tracker: Build against the regular SQLite.
FTS5 is enabled by default in the current version.

* gnu/packages/sqlite.scm (sqlite-with-fts5): Remove variable.
* gnu/packages/gnome.scm (tracker)[inputs]: Change from that to SQLITE.
2019-02-09 20:58:16 +01:00
Marius Bakke 9d51a97809
gnu: webkitgtk: Update to 2.22.6.
* gnu/packages/webkit.scm (webkitgtk-2.22): Update to 2.22.6.
2019-02-09 20:58:15 +01:00
Marius Bakke 037d591367
gnu: libvpx: Update to 1.8.0.
* gnu/packages/patches/gst-plugins-good-libvpx-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/video.scm (libvpx): Update to 1.8.0.
[source](patches): Remove obsolete patch.
(libvpx-1.7): New public variable.
* gnu/packages/gnuzilla.scm (icecat)[inputs]: Use LIBVPX-1.7 instead of LIBVPX.
* gnu/packages/gstreamer.scm (gst-plugins-good)[source](patches): New field.
[arguments]: Add #:make-flags.
2019-02-09 20:58:15 +01:00
Marius Bakke 4a3436449b
gnu: offlineimap: Remove redundant wrapper.
* gnu/packages/mail.scm (offlineimap)[arguments]: Remove phase 'wrap-binary'.
2019-02-09 20:58:15 +01:00
Marius Bakke 0ea0452c0a
gnu: Add xbanish.
* gnu/packages/xdisorg.scm (xbanish): New public variable.
2019-02-09 20:58:15 +01:00
Ludovic Courtès 50a93adc05
Merge branch 'staging' 2019-02-09 15:14:59 +01:00
Arun Isaac 722ac64cd7
gnu: plantuml: Update to 1.2019.0.
* gnu/packages/uml.scm (plantuml): Update to 1.2019.0.
2019-02-09 13:40:12 +05:30
Eric Bavier 68a116bd56
gnu: cool-retro-term: Upgrade to 1.1.1.
* gnu/packages/terminals.scm (cool-retro-term)[source]: Upgrade to 1.1.1.
Remove patches.  Adjust filtering in snippet for added/removed fonts.
[arguments]: Return #t in 'add-alternate-name' phase.
* gnu/packages/patches/cool-retro-term-dont-check-uninit-member.patch,
  gnu/packages/patches/cool-retro-term-fix-array-size.patch,
  gnu/packages/patches/cool-retro-term-memory-leak-1.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2019-02-09 00:50:16 -06:00
Eric Bavier 41313acebf
gnu: openmpi: Upgrade to 4.0.0.
* gnu/packages/linux.scm (psm)[arguments]: Add 'patch-sysmacros phase to fix
"undefined reference to `minor'" errors while linking against
libinfinipath.so.
* gnu/packages/mpi.scm (openmpi): Upgrade to 4.0.0.
[inputs]: Add libevent.
[arguments]: Simplify configure-flags.  Use system libevent.  Adjust romio
version strings.
(%openmpi-setup): Use OMPI_MCA_rmaps_base_mapping_policy for oversubscription.
2019-02-09 00:50:16 -06:00
Tobias Geerinckx-Rice 1482531cd7
gnu: perl-io-compress: Update to 2.084.
* gnu/packages/perl-compression.scm (perl-io-compress): Update to 2.084.
2019-02-08 23:51:18 +01:00
Tobias Geerinckx-Rice b2993cb1e0
gnu: perl-compress-raw-zlib: Update to 2.084.
* gnu/packages/perl-compression.scm (perl-compress-raw-zlib): Update to 2.084.
2019-02-08 23:51:17 +01:00
Tobias Geerinckx-Rice a139501887
gnu: perl-compress-raw-bzip2: Update to 2.084.
* gnu/packages/perl-compression.scm (perl-compress-raw-bzip2): Update to 2.084.
2019-02-08 23:51:16 +01:00
Tobias Geerinckx-Rice 41eac1863a
gnu: gcab: Don't use NAME in source URI.
* gnu/packages/package-management.scm (gcab)[source]: Hard-code name.
2019-02-08 23:51:15 +01:00
Tobias Geerinckx-Rice a1785cfb6d
gnu: gcab: Update to 1.2.
* gnu/packages/package-management.scm (gcab): Update to 1.2.
[source]: Remove snippet.
2019-02-08 23:51:14 +01:00
Tobias Geerinckx-Rice 051ae68b7a
gnu: libraw: Update to 0.19.2.
* gnu/packages/photo.scm (libraw): Update to 0.19.2.
2019-02-08 23:51:14 +01:00
Tobias Geerinckx-Rice 7428d1693a
gnu: abiword: Don't use NAME in source URI.
* gnu/packages/abiword.scm (abiword)[source]: Hard-code name.
2019-02-08 23:51:13 +01:00
Tobias Geerinckx-Rice 64430c87b6
gnu: rdesktop: Don't use NAME in source URI.
* gnu/packages/rdesktop.scm (rdesktop)[source]: Hard-code name.
2019-02-08 23:51:12 +01:00
Tobias Geerinckx-Rice 9c2b56a377
gnu: compton: Don't use unstable tarball.
* gnu/packages/compton.scm (compton)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:12 +01:00
Tobias Geerinckx-Rice 782b1224ec
gnu: bspwm: Don't use unstable tarball.
* gnu/packages/wm.scm (bspwm)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:10 +01:00
Tobias Geerinckx-Rice a4880a2735
gnu: microscheme: Don't use unstable tarball.
* gnu/packages/avr.scm (microscheme)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:10 +01:00
Tobias Geerinckx-Rice 39a7b72065
gnu: python-trezor-agent: Don't use unstable tarball.
* gnu/packages/finance.scm (python-trezor-agent)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:09 +01:00
Tobias Geerinckx-Rice 1fd71120a7
gnu: geierlein: Don't use unstable tarball.
* gnu/packages/finance.scm (geierlein)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:08 +01:00
Tobias Geerinckx-Rice 8b7ac58c16
gnu: ledger: Don't use unstable tarball.
* gnu/packages/finance.scm (ledger)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:08 +01:00
Tobias Geerinckx-Rice d8d910e6e1
gnu: cbatticon: Don't use unstable tarball.
* gnu/packages/admin.scm (cbatticon)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:07 +01:00
Tobias Geerinckx-Rice 807a30999d
gnu: interrobang: Use GIT-... helpers.
* gnu/packages/admin.scm (interrobang)[version]: Use GIT-VERSION.
[source]: Use GIT-FILE-NAME.
2019-02-08 23:51:06 +01:00
Tobias Geerinckx-Rice 7d6e8fda61
gnu: sedsed: Don't use unstable tarball.
* gnu/packages/admin.scm (sedsed)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:05 +01:00
Tobias Geerinckx-Rice 9bc96d13ce
gnu: fdupes: Don't use unstable tarball.
* gnu/packages/admin.scm (fdupes)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:04 +01:00
Tobias Geerinckx-Rice aa372292b3
gnu: cpulimit: Don't use unstable tarball.
* gnu/packages/admin.scm (cpulimit)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:03 +01:00
Tobias Geerinckx-Rice 4b6456ce3b
gnu: progress: Don't use unstable tarball.
* gnu/packages/admin.scm (progress)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:02 +01:00
Tobias Geerinckx-Rice fc204d24be
gnu: dstat: Don't use unstable tarball.
* gnu/packages/admin.scm (dstat)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:02 +01:00
Tobias Geerinckx-Rice 43eb601f76
gnu: sunxi-tools: Don't use unstable tarball.
* gnu/packages/admin.scm (sunxi-tools)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:51:01 +01:00
Tobias Geerinckx-Rice ecb589227c
gnu: igt-gpu-tools: Don't use NAME in source URI.
* gnu/packages/admin.scm (igt-gpu-tools)[source]: Hard-code name.
2019-02-08 23:51:00 +01:00
Tobias Geerinckx-Rice 213114a7b1
gnu: daemontools: Don't assume sources match NAME.
* gnu/packages/admin.scm (daemontools)[source, argumenst]: Hard-code
name.
2019-02-08 23:50:59 +01:00
Tobias Geerinckx-Rice 16572d0e02
gnu: nnn: Don't use NAME in source URI.
* gnu/packages/admin.scm (nnn)[source]: Hard-code name.
2019-02-08 23:50:59 +01:00
Tobias Geerinckx-Rice a0c693e173
gnu: thefuck: Don't use unstable tarball.
* gnu/packages/admin.scm (thefuck)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:50:58 +01:00
Tobias Geerinckx-Rice e956d76ddb
gnu: masscan: Don't use unstable tarball.
* gnu/packages/admin.scm (masscan)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:50:57 +01:00
Tobias Geerinckx-Rice ab213bfd04
gnu: pam-krb5: Don't use NAME in source URI.
* gnu/packages/admin.scm (pam-krb5)[source]: Hard-code name.
2019-02-08 23:50:57 +01:00
Tobias Geerinckx-Rice fe2f01664f
gnu: audit: Don't use NAME in source URI.
* gnu/packages/admin.scm (audit)[source]: Hard-code name.
2019-02-08 23:50:56 +01:00
Tobias Geerinckx-Rice e20796dc7a
gnu: hungrycat: Don't use NAME in source URI.
* gnu/packages/admin.scm (hungrycat)[source]: Hard-code name.
2019-02-08 23:50:55 +01:00
Tobias Geerinckx-Rice 631249ddc0
gnu: avogadro: Don't use unstable tarball.
* gnu/packages/chemistry.scm (avogadro)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-08 23:50:55 +01:00
Tobias Geerinckx-Rice f44eca9468
gnu: launchmon: Don't use NAME in source URI.
* gnu/packages/admin.scm (launchmon)[source]: Hard-code name.
2019-02-08 23:50:54 +01:00
Tobias Geerinckx-Rice 1f6a970592
gnu: florence: Don't use NAME in source URI.
* gnu/packages/accessibility.scm (florence)[source]: Hard-code name.
2019-02-08 23:50:53 +01:00
Tobias Geerinckx-Rice d64e514777
gnu: i3blocks: Use GIT-FILE-NAME.
* gnu/packages/wm.scm (i3blocks)[source]: Use GIT-FILE-NAME.
2019-02-08 23:50:52 +01:00
Tobias Geerinckx-Rice 0fa63b8908
gnu: spice-protocol: Update to 0.12.15.
* gnu/packages/spice.scm (spice-protocol): Update to 0.12.15.
2019-02-08 23:50:52 +01:00
Tobias Geerinckx-Rice 15c661ec8e
gnu: torsocks: Update to 2.3.0.
* gnu/packages/tor.scm (torsocks): Update to 2.3.0.
[inputs]: Remove which.
[arguments]: Update 'absolutize' substitutions.
2019-02-08 23:50:51 +01:00
Tobias Geerinckx-Rice d77ade87fe
gnu: torsocks: Don't use NAME in source URI.
* gnu/packages/tor.scm (torsocks)[source]: Hard-code name.
2019-02-08 23:50:50 +01:00
Tobias Geerinckx-Rice c97a1c4297
gnu: sdl2-ttf: Update to 2.0.15.
* gnu/packages/sdl.scm (sdl2-ttf): Update to 2.0.15.
2019-02-08 23:50:50 +01:00
Ricardo Wurmus 307182d4f7
gnu: rcas-web: Update to 0.1.0.
* gnu/packages/bioinformatics.scm (rcas-web): Update to 0.1.0.
[inputs]: Replace guile2.2-redis with guile-redis.
2019-02-08 22:45:12 +01:00
Arun Isaac 4745f8d71d
gnu: swaks: Update to 20181104.0.
* gnu/packages/mail.scm (swaks): Update to 20181104.0.
2019-02-09 01:08:36 +05:30
Ricardo Wurmus 4714b00e7a
gnu: Add dune-pdelab.
* gnu/packages/maths.scm (dune-pdelab): New variable.
2019-02-08 19:15:03 +01:00
Ricardo Wurmus 85b9371cbe
gnu: Add dune-functions.
* gnu/packages/maths.scm (dune-functions): New variable.
2019-02-08 18:29:30 +01:00
Ricardo Wurmus 0e50630f15
gnu: Add dune-typetree.
* gnu/packages/maths.scm (dune-typetree): New variable.
2019-02-08 17:58:32 +01:00
Ricardo Wurmus ab03d899ca
gnu: Add dune-alugrid.
* gnu/packages/maths.scm (dune-alugrid): New variable.
2019-02-08 17:52:47 +01:00
Danny Milosavljevic fc80f54e29
gnu: Add usbmuxd.
* gnu/packages/libusb.scm (usbmuxd): New variable.
2019-02-08 16:44:51 +01:00
Danny Milosavljevic bc4e8d3e64
gnu: Add ifuse.
* gnu/packages/libusb.scm (ifuse): New variable.
2019-02-08 16:44:51 +01:00
Danny Milosavljevic 6d0b50f651
gnu: libimobiledevice: Propagate "libplist".
* gnu/packages/libusb.scm (libimobiledevice)[propagated-inputs]: Add
libplist.
[inputs]: Remove libplist.
2019-02-08 16:44:49 +01:00
Ricardo Wurmus f57bf15cd8
gnu: guile-redis: Update to 1.3.0.
* gnu/packages/guile-xyz.scm (guile-redis): Update to 1.3.0.
2019-02-08 16:26:20 +01:00
Ricardo Wurmus 5a70aa7d69
gnu: Add dune-localfunctions.
* gnu/packages/maths.scm (dune-localfunctions): New variable.
2019-02-08 16:26:20 +01:00
Ricardo Wurmus ea51d3578c
gnu: Add dune-istl.
* gnu/packages/maths.scm (dune-istl): New variable.
2019-02-08 16:26:20 +01:00
Ricardo Wurmus ef6e69fdec
gnu: Add dune-grid.
* gnu/packages/maths.scm (dune-grid): New variable.
2019-02-08 16:26:20 +01:00
Tobias Geerinckx-Rice 9d58e8819f
gnu: umoci: Update to 0.4.4.
* gnu/packages/virtualization.scm (umoci): Update to 0.4.4.
2019-02-08 12:09:58 +01:00
Christopher Baines 6fd72f7094
gnu: guile-squee: Fix the license.
The license originally specified in the package definition was incorrect. The
true license is the Lesser GNU General Public License.

* gnu/packages/guile-xyz.scm (guile-squee): Change license to license:lgpl3+.
2019-02-08 10:26:20 +00:00
Eric Bavier 7b84610e21
gnu: hdf5: Upgrade to 1.8.21.
* gnu/packages/maths.scm (hdf5): Upgrade to 1.8.21.
[source]: Make version manipulations more readable using match.
2019-02-07 21:20:47 -06:00
Eric Bavier 7fedc3fdfb
gnu: hdf5: Remove use of deprecated MPI1 symbols.
* gnu/packages/patches/hdf5-1.8-mpi-deprecations.patch,
  gnu/packages/patches/hdf5-mpi-deprecations.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/maths.scm (hdf5, hdf5-1.10)[source]: Use them.
2019-02-07 21:20:47 -06:00
Eric Bavier 2bdf26f1c8
gnu: superlu-dist: Remove use of deprecated MPI1 symbols.
* gnu/packages/patches/superlu-dist-fix-mpi-deprecations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (superlu-dist)[source]: Use it.
2019-02-07 21:20:23 -06:00
Pierre Neidhardt 674d180cfa
gnu: emacs-fish-completion: Update to 1.0.
* gnu/packages/emacs-xyz.scm (emacs-fish-completion): Update to 1.0.
2019-02-07 23:10:05 +01:00
Tim Stahel 6f8ade6ee6
gnu: Add gpx.
* gnu/packages/engineering.scm (gpx): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-02-07 22:36:01 +01:00
Ricardo Wurmus 242dbd8e5d
gnu: Add dune-geometry.
* gnu/packages/maths.scm (dune-geometry): New variable.
2019-02-07 22:36:01 +01:00
Ricardo Wurmus 3847d1f22f
gnu: Add dune-common.
* gnu/packages/maths.scm (dune-common): New variable.
2019-02-07 22:36:01 +01:00
Dan Frumin 7d60df330a
gnu: Add coq-autosubst
* gnu/packages/coq.scm (coq-autosubst): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-02-07 22:30:32 +01:00
Mark H Weaver d5240bc09d
gnu: linux-libre: Update to 4.20.7.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.20.7.
(%linux-libre-hash): Update hash.
2019-02-07 13:56:44 -05:00
Mark H Weaver 43194fbe3c
gnu: linux-libre@4.19: Update to 4.19.20.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.20.
(%linux-libre-4.19-hash): Update hash.
2019-02-07 13:55:42 -05:00
Mark H Weaver 848e28aab5
gnu: linux-libre@4.14: Update to 4.14.98.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.98.
(%linux-libre-4.14-hash): Update hash.
2019-02-07 13:54:19 -05:00
Mark H Weaver 4888c21543
gnu: linux-libre@4.9: Update to 4.9.155.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.155.
2019-02-07 13:53:27 -05:00
Mark H Weaver 2b06fcdcd7
gnu: linux-libre@4.4: Update to 4.4.173.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.173.
2019-02-07 13:52:01 -05:00
Pierre Neidhardt 285bf324f0
gnu: Add emacs-redshank.
* gnu/packages/emacs-xyz.scm (emacs-redshank): New variable.
2019-02-07 19:29:49 +01:00
Ludovic Courtès b07712bfb1
gnu: openmpi: Add dependency on SLURM.
This allows users to run Open MPI programs with 'srun'.

* gnu/packages/mpi.scm (openmpi)[inputs]: Add SLURM.
[arguments]: Add "--with-pmi" to #:configure-flags.
2019-02-07 15:46:45 +01:00
Rutger Helling 89ea6252b6
gnu: flatpak: Update to 1.2.0.
* gnu/packages/package-management.scm (flatpak): Update to 1.2.0.
2019-02-07 14:45:54 +01:00
Brett Gilio a9ba0a3154
gnu: python2-rope: Update to 0.11.0
From 1e6322de0c3227827176fb460a11da21a6bba08d Mon Sep 17 00:00:00 2001
From: Brett Gilio <brettg@posteo.net>
Date: Wed, 6 Feb 2019 15:23:56 -0600
Subject: [PATCH] gnu: python2-rope: Update to 0.11.0

* gnu/packages/python-xyz.scm (python2-rope): Update to 0.11.0
2019-02-07 08:51:45 +01:00
Vagrant Cascadian 86ae491f37
gnu: python-configargparse: Update to 0.14.0.
* gnu/packages/python-xyz.scm
  (python-configargparse): Update to 0.14.0.
2019-02-07 08:39:34 +01:00
Vagrant Cascadian 746c074bbe
gnu: python-wheel: Update to 0.32.2.
* gnu/packages/python-xyz.scm (python-wheel): Update to 0.32.2.
2019-02-07 08:39:34 +01:00
Marius Bakke 69fb26d4f5
gnu: mariadb: Add comments about failing tests.
* gnu/packages/databases.scm (mariadb): Add comments.
2019-02-06 23:30:34 +01:00
Kyle Meyer 3ef29c00ed
gnu: Add datefudge.
* gnu/packages/time.scm (datefudge): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-02-06 23:06:18 +01:00
Ludovic Courtès 6732171924
gnu: iproute2: Update to 4.20.0.
* gnu/packages/linux.scm (iproute): Update to 4.20.0.
2019-02-06 23:06:18 +01:00
Kei Kebreau 25945666e3
gnu: abcde: Update to 2.9.3.
* gnu/packages/cdrom.scm (abcde): Update to 2.9.3.
[source]: Update snippet.
2019-02-06 16:49:12 -05:00
Ricardo Wurmus 6df215f8c8
gnu: star: Update to 2.7.0b.
* gnu/packages/bioinformatics.scm (star): Update to 2.7.0b.
[arguments]: Add "add-missing-header" build phase.
2019-02-06 21:32:16 +01:00
Kei Kebreau d11840b43e
gnu: wxmaxima: Update to 19.01.3.
* gnu/packages/maths.scm (wxmaxima): Update to 19.01.3.
2019-02-06 12:52:27 -05:00
Kei Kebreau a4362fba0e
gnu: maxima: Update to 5.42.2.
* gnu/packages/maths.scm (maxima): Update to 5.42.2.
2019-02-06 12:52:27 -05:00
Pierre Neidhardt 808136bdb6
gnu: emacs-lispyville: Update to 20181217.
* gnu/packages/emacs-xyz.scm (emacs-lispyville): Update to 20181217.
2019-02-06 16:21:49 +01:00
Pierre Neidhardt caf810d355
gnu: emacs-lispy: Update to 20190205.
* gnu/packages/emacs-xyz.scm (emacs-lispy): Update to 20190205.
2019-02-06 16:20:32 +01:00
Pierre Neidhardt de87d70e54
gnu: emacs-evil-collection: Update to 20190206.
* gnu/packages/emacs-xyz.scm (emacs-evil-collection): Update to 20190206.
2019-02-06 16:20:23 +01:00
Pierre Neidhardt b6a7697914
gnu: emacs-evil: Update to 1.2.14.
* gnu/packages/emacs-xyz.scm (emacs-evil): Update to 1.2.14.
2019-02-06 16:18:28 +01:00
Christopher Baines 61dafdc0fe
gnu: Add guile-squee.
* gnu/packages/guile-xyz.scm (guile-squee): New variable.
2019-02-06 13:11:35 +00:00
Rutger Helling 9b43a73600
gnu: vulkan-headers: Update to 1.1.99.
* gnu/packages/vulkan.scm (vulkan-headers): Update to 1.1.99.
* gnu/packages/vulkan.scm (vulkan-loader): Update hash.
* gnu/packages/vulkan.scm (vulkan-tools): Update to 1.1.97.0.
2019-02-06 12:10:52 +01:00
Christopher Baines e88fd8beb1
gnu: ocaml-splittable-random: Change @defn to @acronym.
I see an error when running guix package -s relating to this:

  Throw to key `parser-error' with args `(#f "Unknown command" defn)'.

* gnu/packages/ocaml.scm (ocaml-splittable-random)[description]: Change @defn
to @acronym.
2019-02-06 09:18:08 +00:00
Christopher Baines 1d5d0447d3
gnu: ocaml-spawn: Add missing @end itemize to description.
As otherwise this error appears when running things like guix package -s:

  texinfo.scm:745:27: Throw to key `parser-error' with args `(#<input: string
  35ad0e0> "EOF while reading a token " "reading char data")'.

* gnu/packages/ocaml.scm (ocaml-spawn)[description]: Add @end itemize to the
end.
2019-02-06 09:16:50 +00:00
Arun Isaac f4f8c23bae
gnu: mpop: Update to 1.4.2.
* gnu/packages/mail.scm (mpop): Update to 1.4.2.
2019-02-06 13:05:45 +05:30
Nicolas Goaziou 00e18f9fa9
gnu: musescore: Update to 3.0.2.
* gnu/packages/music.scm (musescore): Update to 3.0.2.
[source]: Add patch.
* gnu/packages/patches/musescore-fix-use_webengine.patch: New file.
* gnu/local.mk (dist_patch_DATA): Reference patch.
2019-02-05 23:11:43 +01:00
Julien Lepiller 8baa5c8b7c
gnu: Add ocaml-core-kernel.
* gnu/packages/ocaml.scm (ocaml-core-kernel): New variable.
2019-02-05 22:34:31 +01:00
Julien Lepiller 514b542018
gnu: Add ocaml-core.
* gnu/packages/ocaml.scm (ocaml-core): New variable.
2019-02-05 22:34:28 +01:00
Julien Lepiller 9e81db80eb
gnu: Add ocaml-spawn.
* gnu/packages/ocaml.scm (ocaml-spawn): New variable.
2019-02-05 22:34:26 +01:00
Julien Lepiller 3e3d5ffc34
gnu: Add ocaml-configurator.
* gnu/packages/ocaml.scm (ocaml-configurator): New variable.
2019-02-05 22:34:24 +01:00
Julien Lepiller dc361a2563
gnu: Add ocaml-jane-street-headers.
* gnu/packages/ocaml.scm (ocaml-jane-street-headers): New variable.
2019-02-05 22:34:22 +01:00
Julien Lepiller 5995e6d104
gnu: Add ocaml-splittable-random.
* gnu/packages/ocaml.scm (ocaml-splittable-random): New variable.
2019-02-05 22:34:20 +01:00
Julien Lepiller 255f1cae42
gnu: Add ocaml-ppx-jane.
* gnu/packages/ocaml.scm (ocaml-ppx-jane): New variable.
2019-02-05 22:34:17 +01:00
Julien Lepiller 7bd4b85e9b
gnu: Add ocaml-ppx-bin-prot.
* gnu/packages/ocaml.scm (ocaml-ppx-bin-prot): New variable.
2019-02-05 22:34:15 +01:00
Julien Lepiller d13b9c5f67
gnu: Add ocaml-ppx-base.
* gnu/packages/ocaml.scm (ocaml-ppx-base): New variable.
2019-02-05 22:34:13 +01:00
Julien Lepiller 48ad1181d0
gnu: Add ocaml-ppx-typerep-conv.
* gnu/packages/ocaml.scm (ocaml-ppx-typerep-conv): New variable.
2019-02-05 22:34:11 +01:00
Julien Lepiller f4304c1d6c
gnu: Add ocaml-ppx-js-style.
* gnu/packages/ocaml.scm (ocaml-ppx-js-style): New variable.
2019-02-05 22:34:09 +01:00
Julien Lepiller 4e4e5fb1df
gnu: Add ocaml-ppx-expect.
* gnu/packages/ocaml.scm (ocaml-ppx-expect): New variable.
2019-02-05 22:34:07 +01:00
Julien Lepiller 7ec9a45db3
gnu: Add ocaml-ppx-assert.
* gnu/packages/ocaml.scm (ocaml-ppx-assert): New variable.
2019-02-05 22:34:04 +01:00
Julien Lepiller 6018802d9c
gnu: Add ocaml-ppx-fail.
* gnu/packages/ocaml.scm (ocaml-ppx-fail): New variable.
2019-02-05 22:34:02 +01:00
Julien Lepiller 1365ae47d1
gnu: Add ocaml-ppx-let.
* gnu/packages/ocaml.scm (ocaml-ppx-let): New variable.
2019-02-05 22:34:00 +01:00
Julien Lepiller 79967eeafc
gnu: add ocaml-ppx-optcomp.
* gnu/packages/ocaml.scm (ocaml-ppx-optcomp): New variable.
2019-02-05 22:33:58 +01:00
Julien Lepiller 3f4ecf6649
gnu: Add ocaml-ppx-optional.
* gnu/packages/ocaml.scm (ocaml-ppx-optional): New variable.
2019-02-05 22:33:56 +01:00
Julien Lepiller 6a1140012c
gnu: Add ocaml-ppx-pipebang.
* gnu/packages/ocaml.scm (ocaml-ppx-pipebang): New variable.
2019-02-05 22:33:53 +01:00
Julien Lepiller 44a2ceca19
gnu: Add ocaml-ppx-sexp-message.
* gnu/packages/ocaml.scm (ocaml-ppx-sexp-message): New variable.
2019-02-05 22:33:51 +01:00
Julien Lepiller e93281507d
gnu: Add ocaml-ppx-sexp-value.
* gnu/packages/ocaml.scm (ocaml-ppx-sexp-value): New variable.
2019-02-05 22:33:49 +01:00
Julien Lepiller a58118ca6b
gnu: Add ocaml-typerep.
* gnu/packages/ocaml.scm (ocaml-typerep): New variable.
2019-02-05 22:33:47 +01:00
Julien Lepiller 164b06daeb
gnu: Add ocaml-ppx-here.
* gnu/packages/ocaml.scm (ocaml-ppx-here): New variable.
2019-02-05 22:33:42 +01:00
Julien Lepiller b42afab2e2
gnu: Add ocaml-ppx-bench.
* gnu/packages/ocaml.scm (ocaml-ppx-bench): New variable.
2019-02-05 22:33:40 +01:00
Julien Lepiller db67f56901
gnu: Add ocaml-ppx-enumerate.
* gnu/packages/ocaml.scm (ocaml-ppx-enumerate): New variable.
2019-02-05 22:33:37 +01:00
Julien Lepiller 6692f65218
gnu: Add ocaml-ppx-hash.
* gnu/packages/ocaml.scm (ocaml-ppx-hash): New variable.
2019-02-05 22:33:35 +01:00
Julien Lepiller 49b01fa3e9
gnu: Add ocaml-octavius.
* gnu/packages/ocaml.scm (ocaml-octavius): New variable.
2019-02-05 22:33:33 +01:00
Julien Lepiller a0584d6c97
gnu: Add ocaml-bin-prot.
* gnu/packages/ocaml.scm (ocaml-bin-prot): New variable.
2019-02-05 22:33:31 +01:00
Julien Lepiller e6f08ec93a
gnu: Add ocaml-ppx-custom-printf.
* gnu/packages/ocaml.scm (ocaml-ppx-custom-printf): New variable.
2019-02-05 22:33:29 +01:00
Julien Lepiller 7523674c2b
gnu: Add ocaml-ppx-variants-conv.
* gnu/packages/ocaml.scm (ocaml-ppx-variants-conv): New variable.
2019-02-05 22:33:27 +01:00
Julien Lepiller c7cf165e38
gnu: Add ocaml-ppx-sexp-conv.
* gnu/packaes/ocaml.scm (ocaml-ppx-sexp-conv): New variable.
2019-02-05 22:33:25 +01:00
Julien Lepiller 7b685486ce
gnu: Add ocaml-ppx-fields-conv.
* gnu/packages/ocaml.scm (ocaml-ppx-fields-conv): New variable.
2019-02-05 22:33:23 +01:00
Julien Lepiller d9f8433e17
gnu: Add ocaml-variantslib.
* gnu/packages/ocaml.scm (ocaml-variantslib): New variable.
2019-02-05 22:33:21 +01:00
Julien Lepiller 143685fd1a
gnu: Add ocaml-fieldslib.
* gnu/packages/ocaml.scm (ocaml-fieldslib): New variable.
2019-02-05 22:33:19 +01:00
Julien Lepiller c16c8bb68d
gnu: Add ocaml-ppx-compare.
* gnu/packages/ocaml.scm (ocaml-ppx-compare): New variable.
2019-02-05 22:33:17 +01:00
Julien Lepiller 7e12b4c2bb
gnu: ocaml: Use propagated-inputs.
* gnu/packages/ocaml.scm (ocaml-ppxlib, ocaml-ppx-derivers, ocaml-base)
(ocaml-sexplib): Use propagated-inputs.
2019-02-05 22:33:15 +01:00
Julien Lepiller 51e52f47df
gnu: ocaml-ppx-derivers: Add upstream-name.
* gnu/packages/ocaml.scm (ocaml-ppx-derivers)[properties]: Add
upstream-name.
2019-02-05 22:33:10 +01:00
Andreas Enge 6c8666b451
gnu: unison: Update to 2.51.1.
* gnu/packages/ocaml.scm (unison): Update to 2.51.1, use source from git
instead of svn and remove a snippet, and compile with current OCaml.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-02-05 22:32:51 +01:00
Efraim Flashner 4aeb7f34c9
gnu: shflags: Don't use unstable tarball.
* gnu/packages/version-control.scm (shflow)[source]: Use 'git-fetch'.
[native-inputs]: Remove gzip, tar.
2019-02-05 22:17:14 +02:00
Tobias Geerinckx-Rice 66416c0c1c
gnu: cvs-fast-export: Update to 1.45.
* gnu/packages/version-control.scm (cvs-fast-export): Update to 1.45.
[arguments]: Remove 'fix-setpython-PATH' phase.
2019-02-05 19:48:23 +01:00
Tobias Geerinckx-Rice cfc92cd7bf
gnu: cvs-fast-export: Don't use NAME in source URI.
* gnu/packages/version-control.scm (cvs-fast-export)[source]: Hard-code name.
2019-02-05 19:48:22 +01:00
Efraim Flashner fd3638d89a
gnu: python-sh: Use custom 'check phase.
* gnu/packages/python-xyz.scm (python-sh)[arguments]: Use custom 'check
phase as suggested by upstream documentation.
[native-inputs]: Add python-coverage.
2019-02-05 19:54:10 +02:00
Tobias Geerinckx-Rice ea4b6ffd24
gnu: darcs: Update to 2.14.2.
* gnu/packages/version-control.scm (darcs): Update to 2.14.2.
2019-02-05 18:47:10 +01:00
Tobias Geerinckx-Rice ab1019f165
gnu: nyx: Update to 2.1.0.
* gnu/packages/tor.scm (nyx): Update to 2.1.0.
[source]: Remove patch.
* gnu/packages/patches/nyx-show-header-stats-with-python3.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 18:47:09 +01:00
Tobias Geerinckx-Rice cc2c5c22b5
gnu: noice: Update to 0.7.
* gnu/packages/suckless.scm (noice): Update to 0.7.
2019-02-05 18:47:09 +01:00
Christopher Baines 406ef44258
gnu: Add guile-dbd-postgresql.
Currently, there are packages for guile-dbi and guile-dbd-sqlite3, but the
PostgreSQL and MySQL parts are not packaged. As GNA which did host the release
archives for guile-dbi no longer exists, this package definition uses the
upstream Git repository.

* gnu/packages/guile-xyz.scm (guile-dbd-postgresql): New variable.
(guile-dbi)[arguments]: Add guile-dbd-postgresql to the rpath through the
[inputs]: Add guile-dbd-postgresql.
2019-02-05 15:43:19 +00:00
Tobias Geerinckx-Rice 50f28ac4dc
gnu: pscircle: Update to 1.3.0.
* gnu/packages/admin.scm (pscircle): Update to 1.3.0.
2019-02-05 16:38:25 +01:00
Tobias Geerinckx-Rice 494b702a89
gnu: pscircle: Don't use unstable tarball.
* gnu/packages/admin.scm (pscircle)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-02-05 16:38:25 +01:00
Maxim Cournoyer f9dff4f7fa
gnu: emacs-ert-runner: Fix lisp directory warning.
This fixes the warning message such as: "Warning: Lisp directory
'/tmp/guix-build-emacs-ert-runner-0.7.0-1.90b8fdd.drv-0/source': No such file
or directory" that would be printed upon running ert-runner.

* gnu/packages/emacs-xyz.scm (emacs-ert-runner)[phases]{install-executable}:
Filter out the temporary source directory from the paths composing the
EMACSLOADPATH variable used in the wrapper.
2019-02-05 10:09:11 -05:00
Andreas Enge 8cad7adb59
gnu: fdroidserver: Update to 1.1.1.
* gnu/packages/android.scm (fdroidserver): Update to 1.1.1.
[propagated-inputs]: Add python-defusedxml.
2019-02-05 15:55:58 +01:00
Maxim Cournoyer 975a953bfd
gnu: Add cqfd.
* gnu/packages/docker.scm (cqfd): New variable.
2019-02-05 09:33:39 -05:00
Tobias Geerinckx-Rice 5d941f4eda
gnu: thefuck: Update to 3.28.
* gnu/packages/admin.scm (thefuck): Update to 3.28.
2019-02-05 15:31:02 +01:00
Tobias Geerinckx-Rice 46f3e9358a
gnu: lynis: Update to 2.7.1.
* gnu/packages/admin.scm (lynis): Update to 2.7.1.
2019-02-05 15:31:01 +01:00
Rutger Helling a10050e2dd
gnu: wine-staging: Update to 4.1.
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 4.1.
* gnu/packages/wine.scm (wine-staging): Update to 4.1.
2019-02-05 12:01:13 +01:00
Rutger Helling 12a3abc6cc
gnu: retroarch: Fix wayland backend.
* gnu/packages/emulators.scm (retroarch): Fix wayland backend.
[arguments]: Hard-code wayland-protocols.
[native-inputs]: Add wayland-protocols.
2019-02-05 11:37:29 +01:00
Christopher Baines fd9a6d83c2
gnu: artanis: Make some improvements.
* gnu/packages/guile-xyz.scm (artanis): Remove a tab character by the
revision.
[arguments]: Patch the site-dir for the help command, to make it work. Wrap
the art command such that it finds guile-json and guile-redis.
2019-02-05 09:24:34 +00:00
Andrew Miloradovsky 16bb27f281
gnu: Add xmagnify.
* gnu/packages/accessibility.scm (xmagnify): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-02-05 10:07:52 +01:00
Rutger Helling 45267af1a3
gnu: retroarch: Update to 1.7.6.
* gnu/packages/emulators.scm (retroarch): Update to 1.7.6.
[inputs]: Add libxrandr.
2019-02-05 08:24:20 +01:00
Nicolas Goaziou 2dd662f48e
gnu: emacs-org, emacs-org-contrib: Update to 9.2.1.
* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.2.1.
(emacs-org-contrib): Update to 20190203, i.e., 9.2.1.
2019-02-05 07:42:30 +01:00
Leo Famulari e36d043882
gnu: Remove unused patch 'mcron-install.patch'.
This is a followup to commit cfbf6de18c.

* gnu/packages/patches/mcron-install.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:50 +01:00
Leo Famulari 484f010dd7
gnu: Remove unused patch 'ocaml-graph-honor-source-date-epoch.patch'.
This is a followup to commit 564cf93f2a.

* gnu/packages/patches/ocaml-graph-honor-source-date-epoch.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:49 +01:00
Leo Famulari 5cc3dbbccd
gnu: Remove unused patch 'ocaml-findlib-make-install.patch'.
This is a followup to commit bff6739d5e.

* gnu/packages/patches/ocaml-findlib-make-install.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:49 +01:00
Leo Famulari 5baf78999c
gnu: Remove unused patch 'python2-rdflib-drop-sparqlwrapper.patch'.
* gnu/packages/patches/python2-rdflib-drop-sparqlwrapper.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:49 +01:00
Leo Famulari 800d74dc9a
gnu: Remove unused patch 'openldap-CVE-2017-9287.patch'.
This is a followup to commit 47415332d7.

* gnu/packages/patches/openldap-CVE-2017-9287.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:49 +01:00
Leo Famulari 99ee274f0d
gnu: Remove unused patch 'glibc-memchr-overflow-i686.patch'.
This is a followup to commit 67d527e35e.

* gnu/packages/patches/glibc-memchr-overflow-i686.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:49 +01:00
Leo Famulari 1d1b0b1fb1
gnu: Remove unused patch 'net-tools-bitrot.patch'.
This is a followup to commit b5f610620b.

* gnu/packages/patches/net-tools-bitrot.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-05 00:19:49 +01:00
Leo Famulari 035542e93a
gnu: Remove unused patch 'xboing-CVE-2004-0149.patch'.
This is a followup to commit 740a335558.

* gnu/packages/patches/xboing-CVE-2004-0149.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-04 23:56:39 +01:00
Leo Famulari 6bf2201350
gnu: Remove unused patch 'ao-cad-aarch64-support.patch'.
This is a followup to commit 28f4d56dd3.

* gnu/packages/patches/ao-cad-aarch64-support.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-04 23:51:34 +01:00
Leo Famulari ee2875e57d
gnu: Remove unused patch 'blender-newer-ffmpeg.patch'.
This is a followup to commit fc51c28ae8.

* gnu/packages/patches/blender-newer-ffmpeg.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-04 23:46:26 +01:00
Leo Famulari bfa3e64d7f
gnu: Removed unused patch 'readline-7.0-mingw.patch'.
This patch was introduced in commit ae12d58627,
but it was never used.

See <https://bugs.gnu.org/26581> for more information.

* gnu/packages/patches/readline-7.0-mingw.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-02-04 23:45:25 +01:00
Gabriel Hondet 308d72bfe4
gnu: Add ocaml-ppx-inline-test.
* gnu/packages/ocaml.scm (ocaml-ppx-inline-test): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-02-04 22:03:30 +01:00
Gabriel Hondet b2c2c415c5
gnu: ocaml-migrate-parsetree: Update to 1.2.0.
* gnu/packages/ocaml.scm (ocaml-migrate-parsetree): Update to 1.2.0.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-02-04 22:03:27 +01:00
Gabriel Hondet 625a3daa12
gnu: dune: Update to 1.6.3.
* gnu/packages/ocaml.scm (dune): Update to 1.6.3.
* guix/build/dune-build-system.scm (build): Use --libdir.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-02-04 22:03:22 +01:00
Tobias Geerinckx-Rice 8c35a6dd20
gnu: gx, go-github-com-whyrusleeping-gx-util: Update to 0.14.1.
* gnu/packages/ipfs.scm (gx, go-github-com-whyrusleeping-gx-util): Update to 0.14.1.
2019-02-04 21:46:56 +01:00
Tobias Geerinckx-Rice a702285275
gnu: gambit-c: Update to 4.9.2.
* gnu/packages/scheme.scm (gambit-c): Update to 4.9.2.
2019-02-04 21:46:55 +01:00
Tobias Geerinckx-Rice d6bbb7e549
gnu: autossh: Update to 1.4g.
* gnu/packages/ssh.scm (autossh): Update to 1.4g.
2019-02-04 21:46:55 +01:00
Tobias Geerinckx-Rice 26045af93c
gnu: autossh: Use HTTPS home page.
* gnu/packages/ssh.scm (autossh)[source, home-page]: Use HTTPS.
2019-02-04 21:46:55 +01:00
Tobias Geerinckx-Rice 627c6531f0
gnu: sshuttle: Update to 0.78.5.
* gnu/packages/vpn.scm (sshuttle): Update to 0.78.5.
[native-inputs]: Add python-flake8 and python-pytest-cov.
Remove implied python-pytest.
2019-02-04 21:46:55 +01:00
Oleg Pykhalov 14a6699c17
gnu: php: Fix test failure.
* gnu/packages/php.scm (php)[arguments]: Delete
'ext/curl/tests/curl_basic_009.phpt' file.
2019-02-04 23:12:51 +03:00
Oleg Pykhalov 965ff0233e
gnu: gtk-vnc: Update to 0.9.0.
* gnu/packages/gnome.scm (gtk-vnc): Update to 0.9.0.
2019-02-04 22:44:53 +03:00
Ludovic Courtès 44cfbb6233
gnu: youtube-dl: Update to 2019.01.30.1.
* gnu/packages/video.scm (youtube-dl): Update to 2019.01.30.1.
2019-02-04 16:20:01 +01:00
Ricardo Wurmus 3869effdd5
gnu: python-sh: Remove duplicate.
* gnu/packages/python-xyz.scm (python-sh): Remove duplicate definition.
2019-02-04 12:15:09 +01:00
Ricardo Wurmus c5b806a94a
gnu: go-github-com-minio-sha256-simd: Remove duplicate.
* gnu/packages/syncthing.scm (go-github-com-minio-sha256-simd): Remove
duplicate.
* gnu/packages/golang.scm (go-github-com-minio-sha256-simd): Bump revision to
supersede the older duplicate.
2019-02-04 12:13:07 +01:00
Ricardo Wurmus e24ef3698d
gnu: ecl-cl-markup: Remove duplicate.
* gnu/packages/lisp.scm (ecl-cl-markup): Rename duplicate from this...
(ecl-cl-css): ...to this.
2019-02-04 12:07:51 +01:00
Ricardo Wurmus 39ee82ffeb
gnu: python-astor: Remove duplicate.
* gnu/packages/python-xyz.scm (python-astor): Remove duplicate.
2019-02-04 12:06:29 +01:00
Ricardo Wurmus 42f0b0c21e
gnu: Add missing module reference.
This is a follow-up to commit 05b4b3ea05.

* gnu/packages/python-xyz.scm: Add missing reference to (gnu packages
monitoring).
2019-02-04 12:05:43 +01:00
Ricardo Wurmus d9b0216b6f
gnu: python-send2trash: Remove duplicates.
* gnu/packages/python-xyz.scm (python-send2trash, python2-send2trash): Remove
duplicates.
[source]: Fetch from git.
2019-02-04 11:57:14 +01:00
Ricardo Wurmus 05b4b3ea05
gnu: python-prometheus-client: Remove duplicate.
* gnu/packages/monitoring.scm (python-prometheus-client): Update to 0.5.0.
* gnu/packages/python-xyz.scm (python-prometheus-client,
python2-prometheus-client): Remove variables.
2019-02-04 11:46:10 +01:00
Ricardo Wurmus 15218d4e18
gnu: guile-wisp: Update to 0.9.9.1.
* gnu/packages/guile-xyz.scm (guile-wisp): Update to 0.9.9.1.
[arguments]: Add phases to build and install Emacs files.
[native-inputs]: Add emacs-minimal.
2019-02-04 11:15:52 +01:00
Vagrant Cascadian 8c00379c47
gnu: 0ad: Update to 0.0.23b-alpha.
* gnu/packages/games.scm (0ad-data, 0ad): Update to 0.0.23b-alpha.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-02-04 10:49:10 +01:00
Ricardo Wurmus 1e957fabcf
gnu: borg: Make man pages reproducible.
* gnu/packages/backup.scm (borg)[arguments]: Add
"remove-documentation-timestamps" phase.
2019-02-04 10:49:10 +01:00
Tobias Geerinckx-Rice 26b7d23aa6
gnu: containerd: Update to 1.2.2.
* gnu/packages/docker.scm (containerd): Update to 1.2.2.
2019-02-04 09:39:12 +01:00
Tobias Geerinckx-Rice 17d25019fd
gnu: docker-cli: Use HTTPS home page.
* gnu/packages/docker.scm (docker-cli)[home-page]: Use HTTPS.
2019-02-04 09:39:12 +01:00
Tobias Geerinckx-Rice 3cfa236e56
gnu: freeipmi: Update to 1.6.3.
* gnu/packages/freeipmi.scm (freeipmi): Update to 1.6.3.
2019-02-04 09:39:12 +01:00
Tobias Geerinckx-Rice b29909b40e
gnu: Remove duplicate import from (gnu packages gnome).
* gnu/packages/messaging.scm (define-module): Remove duplicate module
imports.  Order the remainder alphabetically.
2019-02-04 09:39:12 +01:00
Tobias Geerinckx-Rice 7a66d8a464
gnu: gnome-mpv: Update to 0.16.
* gnu/packages/video.scm (gnome-mpv): Update to 0.16.
2019-02-04 09:39:11 +01:00
Tobias Geerinckx-Rice f0e6859310
gnu: jo: Update to 1.2.
* gnu/packages/web.scm (jo): Update to 1.2.
2019-02-04 09:39:11 +01:00
Efraim Flashner 1009e6e7ec
gnu: go@1.4: Build with binutils-gold on armhf and aarch64.
* gnu/packages/golang.scm (go@1.4)[native-inputs]: Add binutils-gold
for armhf-linux and aarch64-linux.
2019-02-04 08:07:47 +02:00
Efraim Flashner 28317d4990
gnu: Add binutils-gold.
This commit is thanks to Guix Days.

* gnu/packages/base.scm (binutils-gold): New variable.
2019-02-04 08:07:39 +02:00
Vagrant Cascadian 4da4e952dd
gnu: u-boot: Update to 2019.01.
* gnu/packages/bootloaders.scm (u-boot): Update to 2019.01.
(u-boot-tools): Disable CONFIG_SOUND in sandbox configs.
(u-boot-pinebook)[source]: Remove patches.
* gnu/packages/patches/u-boot-pinebook-a64-update-dts.patch,
gnu/packages/patches/u-boot-pinebook-dts.patch,
gnu/packages/patches/u-boot-pinebook-mmc-calibration.patch,
gnu/packages/patches/u-boot-pinebook-r_i2c-controller.patch,
gnu/packages/patches/u-boot-pinebook-syscon-node.patch,
gnu/packages/patches/u-boot-pinebook-video-bridge.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust as necessary.
2019-02-04 00:21:48 +01:00
Danny Milosavljevic c7797b75cc
gnu: efilinux: Fix indentation of source code.
Follow-up to 6adfcbeab1.

* gnu/packages/efi.scm (efilinux): Fix indentation of source code.
2019-02-04 00:16:47 +01:00
Danny Milosavljevic 6adfcbeab1
gnu: fc-host-tools: Update to 9a.
* gnu/packages/embedded.scm (fc-host-tools)[source]: Update to 9a.
[arguments]<#:phases>[patch-installation-paths]: Modify.
2019-02-04 00:14:18 +01:00
Danny Milosavljevic bb4a8f4851
gnu: Add efilinux.
* gnu/packages/efi.scm (efilinux): New variable.
2019-02-04 00:14:18 +01:00
Danny Milosavljevic 527aab6f18
gnu: Add efitools.
* gnu/packages/efi.scm (efitools): New variable.
2019-02-04 00:14:18 +01:00
Danny Milosavljevic 3da49652ad
gnu: Add sbsigntools.
* gnu/packages/efi.scm (sbsigntools): New variable.
2019-02-04 00:14:18 +01:00
Danny Milosavljevic f8ff37d6c0
gnu: Add gnu-efi.
* gnu/packages/efi.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-02-04 00:14:16 +01:00
Ludovic Courtès 765a5bf167
self: Ensure the daemon refers to the right 'guix' command.
Previously it would refer to
/var/guix/profiles/per-user/root/current-guix/bin/guix, which would fail
when that profile does not exist.  This is notably the case when using
'channel-instance->package' as done in commit
7e6d8d366a.

* gnu/packages/package-management.scm (guix-daemon)[arguments]: In
'install phase, honor environment variable 'GUIX'.
* guix/self.scm (whole-package)[wrap]: New procedure.
Use it.
2019-02-04 00:03:30 +01:00
Ricardo Wurmus 6bb5f88e1d
gnu: Add guile-picture-language.
* gnu/packages/guile-xyz.scm (guile-picture-language): New variable.
2019-02-03 01:37:38 +01:00
Nicolas Goaziou 7f055a0a37
Update copyright header. 2019-02-02 22:54:12 +01:00
Nicolas Goaziou d90fd183bd
gnu: giac-xcas: Update to 1.5.0-37.
* gnu/packages/algebra.scm (giac-xcas): Update to 1.5.0-37.
2019-02-02 22:52:05 +01:00
Marius Bakke 8576505422
gnu: libreoffice: Fix FTBFS with Boost 1.69.0.
* gnu/packages/patches/libreoffice-boost.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/libreoffice.scm (libreoffice)[source](patches): Add it.
2019-02-02 20:10:18 +01:00
Kei Kebreau ba259bad59
gnu: milkytracker: Add LHA decompression support.
* gnu/packages/music.scm (milkytracker)[inputs]: Add lhasa.
2019-02-02 09:22:17 -05:00
Nicolas Goaziou 8f4d15f1ff
Update some copyright headers 2019-02-02 13:41:46 +01:00
Nicolas Goaziou 5fc843cc63
gnu: wireshark: Update to 2.6.6.
* gnu/packages/networking.scm (wireshark): Update to 2.6.6.
2019-02-02 13:39:58 +01:00
Clément Lassieur b2cb16133f
gnu: Fix syntax error in emacs-xyz.scm.
* gnu/packages/emacs-xyz.scm (emacs-repo): Add missing parentheses and
license.
2019-02-02 12:55:13 +01:00
Mathieu Othacehe 7106671088
gnu: Add emacs-google-c-style.
* gnu/packages/emacs-xyz.scm (emacs-google-c-style): New variable.
2019-02-02 11:42:11 +01:00
Mathieu Othacehe bdccd7e101
gnu: Add emacs-alect-themes.
* gnu/packages/emacs-xyz.scm (emacs-alect-themes): New variable.
2019-02-02 11:42:11 +01:00
Nicolas Goaziou c14b3a8d7b
gnu: silkaj: Update to 0.6.5.
* gnu/packages/finance.scm (silkaj): Update to 0.6.5.
[inputs]: Add python-click, python-dunitpery.  Remove python-pyaes,
python-scrypt, and python-commandlines.
2019-02-02 11:38:28 +01:00
Nicolas Goaziou 352033f31b
gnu: python-duniterpy: Update to 0.52.0.
* gnu/packages/finance.scm (python-duniterpy): Update to 0.52.0.
[propagated-inputs]: Add python-pyaes.
2019-02-02 11:29:50 +01:00
Clément Lassieur 57b663fa8f
gnu: Add emacs-repo.
* gnu/packages/emacs-xyz.scm (emacs-repo): New variable.
2019-02-02 11:14:39 +01:00
Clément Lassieur ba25ba903d
gnu: Add emacs-dtrt-indent.
* gnu/packages/emacs-xyz.scm (emacs-dtrt-indent): New variable.
2019-02-02 11:14:39 +01:00
Arun Isaac 43af5f9d19
gnu: Add emacs-mkmcc-gnuplot-mode.
* gnu/packages/emacs-xyz.scm (emacs-mkmcc-gnuplot-mode): New variable.
2019-02-02 00:31:21 +05:30
Tobias Geerinckx-Rice 389ae5181e
gnu: znc: Update to 1.7.2.
* gnu/packages/messaging.scm (znc): Update to 1.7.2.
2019-02-01 17:39:51 +01:00
Leo Famulari 39ea311cbe
gnu: direnv: Update to 2.15.2.
* gnu/packages/shellutils.scm (direnv): Update to 2.15.2.
[inputs]: Use the default Go compiler. Add go-github-com-burntsushi-toml
and go-github-com-direnv-go-dotenv.
[arguments]: Add a 'setup-go-environment' phase.
2019-02-01 17:21:13 +01:00
Leo Famulari bc58bb9bdf
gnu: Add go-github-com-direnv-go-dotenv.
* gnu/packages/golang.scm (go-github-com-direnv-go-dotenv): New variable.
2019-02-01 17:21:10 +01:00
Pierre Neidhardt c4e4b85397
gnu: emacs-slime: Update to 2.23.
* gnu/packages/emacs-xyz.scm (emacs-slime): Update to 2.23.
2019-02-01 17:13:17 +01:00
Leo Famulari 5d5e45850a
gnu: certbot, python-acme: Update to 0.30.2.
* gnu/packages/tls.scm (certbot, python-acme): Update to 0.30.2.
2019-02-01 16:49:44 +01:00
Mark H Weaver 85ca23caba
gnu: linux-libre: Update to 4.20.6.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.20.6.
(%linux-libre-hash): Update hash.
2019-01-31 23:59:06 -05:00
Mark H Weaver 65466a2b10
gnu: linux-libre@4.19: Update to 4.19.19.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.19.
(%linux-libre-4.19-hash): Update hash.
2019-01-31 23:57:57 -05:00
Mark H Weaver 9d5414f1a4
gnu: linux-libre@4.14: Update to 4.14.97.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.97.
(%linux-libre-4.14-hash): Update hash.
2019-01-31 23:57:06 -05:00
Mark H Weaver 20d32ac279
gnu: linux-libre@4.9: Update to 4.9.154.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.154.
2019-01-31 23:56:15 -05:00
Eric Bavier 4b444fc5a5
gnu: imb: Update to 2019.1.
* gnu/packages/benchmark.scm (imb)[source]: Update to 2019.1.  Use
git-download.
[arguments]: Adjust build and install phases for new source organization.  Let
the standard 'install-license-files' phase do its thing.
2019-01-31 22:12:56 -06:00
Eric Bavier 56d447ba16
gnu: r-rmpi: Setup MPI for tests.
* gnu/packages/cran.scm (r-rmpi)[arguments]: Add 'mpi-setup phase.
2019-01-31 22:12:56 -06:00
Eric Bavier eb6785cfe7
gnu: fftw-openmpi: Setup MPI for tests.
* gnu/packages/algebra.scm (fftw-openmpi)[arguments]: Add 'mpi-setup phase.
2019-01-31 22:12:56 -06:00
Marius Bakke 0747328e31
Merge branch 'master' into staging 2019-01-31 23:32:56 +01:00
Yoshinori Arai ff75441fcf
gnu: Add xclock.
* gnu/packages/xorg.scm (xclock): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-01-31 22:34:23 +01:00
Gabriel Hondet 07c82daad4
gnu: Add python-isrcsubmit.
* gnu/packages/music.scm (python-isrcsubmit): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-01-31 22:01:43 +01:00
Gabriel Hondet 1331a6c07a
gnu: Add python-discid.
* gnu/packages/music.scm (python-discid): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-01-31 22:01:43 +01:00
Marius Bakke 84243592fe
gnu: lookingglass: Download from git.
* gnu/packages/virtualization.scm (lookingglass)[source]: Change to GIT-FETCH.
2019-01-31 20:57:22 +01:00
Marius Bakke cb85742fa8
gnu: hwloc: Update to 2.0.3.
* gnu/packages/mpi.scm (hwloc-2.0): Update to 2.0.3.
2019-01-31 20:57:22 +01:00
Marius Bakke 9dd5084589
gnu: hwloc@1: Update to 1.11.12.
* gnu/packages/mpi.scm (hwloc): Update to 1.11.12.
2019-01-31 20:57:22 +01:00
Marius Bakke 8f8bc40677
gnu: VTK: Update to 8.2.0.
* gnu/packages/image-processing.scm (vtk): Update to 8.2.0.
2019-01-31 20:57:21 +01:00
Marius Bakke f1d4f264a2
gnu: VTK: Use HTTPS URLs.
* gnu/packages/image-processing.scm (vtk)[source, home-page]: Use HTTPS.
2019-01-31 20:57:21 +01:00
Marius Bakke 3cf3255796
gnu: whois: Update to 5.4.1.
* gnu/packages/networking.scm (whois): Update to 5.4.1.
2019-01-31 20:57:21 +01:00
Marius Bakke 8f22bf9e6d
gnu: json-modern-cxx: Fetch from git.
* gnu/packages/cpp.scm (json-modern-cxx)[source]: Use GIT-FETCH.
[source](snippet): End on #t.
2019-01-31 20:57:21 +01:00
Marius Bakke 0a3849f610
gnu: httpd: Update to 2.4.38.
* gnu/packages/web.scm (httpd): Update to 2.4.38.
2019-01-31 20:57:21 +01:00
Marius Bakke 71cb7512c4
gnu: libwebp: Update to 1.0.2.
* gnu/packages/image.scm (libwebp): Update to 1.0.2.
2019-01-31 20:57:21 +01:00
Marius Bakke 39855bfef1
gnu: p11-kit: Update to 0.23.15.
* gnu/packages/patches/p11-kit-jks-timestamps.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/tls.scm (p11-kit): Update to 0.23.15.
[source](patches): New field.
2019-01-31 20:57:21 +01:00
Marius Bakke 7c56237b4c
gnu: i3-wm: Update to 4.16.1.
* gnu/packages/wm.scm (i3-wm): Update to 4.16.1.
2019-01-31 20:57:21 +01:00
Marius Bakke b8c0b9c1a3
gnu: msmtp: Update to 1.8.2.
* gnu/packages/mail.scm (msmtp): Update to 1.8.2.
2019-01-31 20:57:21 +01:00
Efraim Flashner 9117d6df87
gnu: tcc: Fix building on armhf-linux.
* gnu/packages/c.scm (tcc)[arguments]: Add 'configure-flag to set the
triplet when building for armhf-linux.
2019-01-31 18:39:19 +02:00
Efraim Flashner 0270b24b65
gnu: tcc: Mark aarch64-linux as supported.
* gnu/packages/c.scm (tcc)[supported-systems]: Remove aarch64.
2019-01-31 17:47:44 +02:00
Ricardo Wurmus 740a335558
gnu: Remove xboing.
* gnu/packages/games.scm (xboing): Remove variable.
2019-01-31 16:29:53 +01:00
Ricardo Wurmus 395a95bb75
gnu: guile-hall: Wrap with guile-config.
* gnu/packages/guile-xyz.scm (guile-hall)[arguments]: Extend
"hall-wrap-binaries" phase to include guile-config in the load path.
2019-01-31 16:26:22 +01:00
Andreas Enge adba64662c
gnu: Add python-cypari2 and python2-cypari2.
* gnu/packages/sagemath.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register new module.
2019-01-31 14:58:47 +01:00
Leo Famulari 11d19ca236
gnu: QEMU: Fix CVE-2018-16872 and CVE-2019-6778.
* gnu/packages/patches/qemu-CVE-2018-16872.patch,
gnu/packages/patches/qemu-CVE-2019-6778.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/virtualization.scm (qemu)[source]: Use them.
2019-01-31 14:35:48 +01:00
Arun Isaac a382860bd4
gnu: rss-bridge: Update to 2019-01-13.
* gnu/packages/web.scm (rss-bridge): Update to 2019-01-13.
[source]: Use git-fetch.
[native-inputs]: Remove gzip and tar.
2019-01-31 16:27:39 +05:30
Rutger Helling e1c3ffcfcd
gnu: scdoc: Update to 1.8.1.
* gnu/packages/man.scm (scdoc): Update to 1.8.1.
2019-01-31 10:09:29 +01:00
Nicolas Goaziou 2e484e78cd
gnu: mame: Update to 0.206.
* gnu/packages/emulators.scm (mame): Update to 0.206.
2019-01-30 22:59:44 +01:00
Kei Kebreau 0dcea35d9a
gnu: Add lhasa.
* gnu/packages/compression.scm (lhasa): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-01-30 21:24:01 +01:00
Ricardo Wurmus ba123b6dda
gnu: star: Update to 2.7.0a.
* gnu/packages/bioinformatics.scm (star): Update to 2.7.0a.
2019-01-30 15:44:47 +01:00
Mark H Weaver 24886c1389
gnu: icecat: Update to 60.5.0-guix1 [security-fixes].
Includes fixes for CVE-2018-18500, CVE-2018-18501, and CVE-2018-18505.

* gnu/packages/gnuzilla.scm (icecat): Update to 60.5.0-guix1.
[version]: Use %icecat-version.
[source]: Inherit from 'icecat-source'.  Remove obsolete patches.
* gnu/packages/patches/icecat-avoid-bundled-libraries.patch,
gnu/packages/patches/icecat-use-system-graphite2+harfbuzz.patch,
gnu/packages/patches/icecat-use-system-media-libs.patch: Adapt to 60.5.0.
2019-01-29 22:29:42 -05:00
Mark H Weaver 948879eeda
gnu: icecat: Add icecat-source.
* gnu/packages/gnuzilla.scm (computed-origin-method): New variable.
(%icecat-version, icecat-source): New variables.
* gnu/packages/patches/icecat-makeicecat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-01-29 22:29:40 -05:00
Ludovic Courtès 286bea0dba
gnu: clang-runtime@3.5: Fix compilation on glibc 2.28.
Reported by zimoun <zimon.toutoune@gmail.com>.

* gnu/packages/llvm.scm (clang-runtime-3.5): Add
"clang-3.5-libsanitizer-ustat-fix.patch".
2019-01-29 23:46:33 +01:00
Ludovic Courtès b552e307ed
gnu: guile-commonmark: Update to 0.1.2.
* gnu/packages/guile-xyz.scm (guile-commonmark): Update to 0.1.2.
[source](modules, snippet): Remove.
2019-01-29 23:46:33 +01:00
Ludovic Courtès db9771a9a9
gnu: guile-git: Update to 0.2.0.
* gnu/packages/guile.scm (guile-git): Update to 0.2.0.
2019-01-29 23:46:33 +01:00
Leo Famulari f5eb570c59
gnu: Mutt: Update to 1.11.2.
* gnu/packages/mail.scm (mutt): Update to 1.11.2.
2019-01-29 15:52:33 -05:00
Ricardo Wurmus 631337063e
gnu: Add texlive-latex-beamer.
* gnu/packages/tex.scm (texlive-latex-beamer): New variable.
2019-01-29 17:18:23 +01:00
Ricardo Wurmus 1d4c2dabef
gnu: texlive-latex-seminar: Copy files to output.
* gnu/packages/tex.scm (texlive-latex-seminar)[build-system]: Use
trivial-build-system.
[arguments]: Copy files to output.
2019-01-29 14:07:03 +01:00
Mathieu Lirzin 9e532ae22a
gnu: clojure: Update to 1.10.0.
* gnu/packages/clojure.scm (clojure): Update to 1.10.0.
[source]: Use 'git-fetch'.
2019-01-29 10:59:06 +01:00
Rutger Helling b412ddcb1a
gnu: kitty: Update to 0.13.3.
* gnu/packages/terminals.scm (kitty): Update to 0.13.3.
[inputs]: Replace python2-pygments with python-pygments. Add wayland.
[arguments]: Add 'hard-code-libegl phase.
2019-01-29 10:10:06 +01:00
Efraim Flashner 23c2598233
gnu: x265: Update to 3.0.
* gnu/packages/video.scm (x265): Update to 3.0.
[source]: Remove patch.
* gnu/packages/patches/x265-detect512-all-arches.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-01-29 10:07:58 +02:00
Ludovic Courtès db7c901af1
gnu: guix: Update to 4bddd12.
* gnu/packages/package-management.scm (guix): Update to 4bddd12.
2019-01-28 23:52:20 +01:00
Gábor Boskovits 95bc85b7da
gnu: Add openjdk 11.
* gnu/packages/java.scm (openjdk11): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-01-28 23:15:27 +01:00
Meiyo Peng 4bddd12ad5
gnu: fish: Use fish-foreign-env to source /etc/profile.
* gnu/packages/shells.scm (fish): Use fish-foreign-env to source /etc/profile
  when user logs in.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-28 23:13:41 +01:00
Meiyo Peng 1d962fc0a1
gnu: Add fish-foreign-env.
* gnu/packages/shells.scm (fish-foreign-env): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-28 23:13:41 +01:00
Meiyo Peng e1dba5bea0
gnu: fish: Update to 3.0.0.
* gnu/packages/shells.scm (fish): Update to 3.0.0.
  [source]: Remove dead URL.
  [inputs]: Remove bc.  Replace python-wrapper with python.
  [arguments]: Remove configure-flags.  Enable fish to source
  /etc/fish/config.fish.  Enable completions, functions and configurations
  in user's and system's guix profiles.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-01-28 23:13:41 +01:00
Ludovic Courtès f15800946d
gnu: youtube-dl: Update to 2019.01.27.
* gnu/packages/video.scm (youtube-dl): Update to 2019.01.27.
2019-01-28 23:13:40 +01:00
Ricardo Wurmus 5a23696a47
gnu: fastcap: Fix build and use INVOKE.
* gnu/packages/engineering.scm (fastcap)[native-inputs]: Replace texlive-tiny
with a texlive-union including texlive-fonts-amsfonts.
[arguments]: Use INVOKE in build phases.
2019-01-28 20:30:20 +01:00
Ricardo Wurmus ad34338d1e
gnu: scons: Update to 3.0.3.
Fixes <https://bugs.gnu.org/34236>.

* gnu/packages/python-xyz.scm (scons): Update to 3.0.3.
[arguments]: Add "bootstrap" phase.
2019-01-28 20:09:51 +01:00
Ricardo Wurmus 1d1e3676ba
gnu: r-genomicfeatures: Update to 1.34.2.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.2.
2019-01-28 16:27:35 +01:00
Ricardo Wurmus ea0eaf537a
gnu: r-variantannotation: Update to 1.28.10.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.10.
2019-01-28 16:27:35 +01:00
Ricardo Wurmus df00ca25bc
gnu: r-rmpfr: Update to 0.7-2.
* gnu/packages/cran.scm (r-rmpfr): Update to 0.7-2.
2019-01-28 16:27:35 +01:00
Ricardo Wurmus 61cb2e3133
gnu: r-waveslim: Update to 1.7.5.1.
* gnu/packages/cran.scm (r-waveslim): Update to 1.7.5.1.
2019-01-28 16:27:35 +01:00
Ricardo Wurmus 0207ad9ee8
gnu: r-activity: Update to 1.2.
* gnu/packages/cran.scm (r-activity): Update to 1.2.
[propagated-inputs]: Remove r-overlap.
2019-01-28 16:27:35 +01:00
Ricardo Wurmus 211628044e
gnu: r-emmeans: Update to 1.3.2.
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.2.
2019-01-28 16:27:35 +01:00
Ricardo Wurmus 62595ee342
gnu: r-th-data: Update to 1.0-10.
* gnu/packages/cran.scm (r-th-data): Update to 1.0-10.
2019-01-28 16:27:35 +01:00
Ricardo Wurmus ddd168ff32
gnu: r-acceptancesampling: Update to 1.0-6.
* gnu/packages/cran.scm (r-acceptancesampling): Update to 1.0-6.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus 7d4b98181a
gnu: r-vioplot: Update to 0.3.0.
* gnu/packages/cran.scm (r-vioplot): Update to 0.3.0.
[propagated-inputs]: Add r-zoo.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus b4b1a9440b
gnu: r-jomo: Update to 2.6-6.
* gnu/packages/cran.scm (r-jomo): Update to 2.6-6.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus 9e0162df85
gnu: r-fitdistrplus: Update to 1.0-14.
* gnu/packages/cran.scm (r-fitdistrplus): Update to 1.0-14.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus fe24aa2a4f
gnu: r-colorspace: Update to 1.4-0.
* gnu/packages/cran.scm (r-colorspace): Update to 1.4-0.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus b3578189aa
gnu: r-ggmap: Update to 2.6.2.
* gnu/packages/cran.scm (r-ggmap): Update to 2.6.2.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus 48246864b1
gnu: r-ranger: Update to 0.11.1.
* gnu/packages/statistics.scm (r-ranger): Update to 0.11.1.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus 56daae7b58
gnu: r-prabclus: Update to 2.2-7.
* gnu/packages/statistics.scm (r-prabclus): Update to 2.2-7.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus f308d426fd
gnu: r-gplots: Update to 3.0.1.1.
* gnu/packages/statistics.scm (r-gplots): Update to 3.0.1.1.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus 69e9899a2f
gnu: r-hmisc: Update to 4.2-0.
* gnu/packages/statistics.scm (r-hmisc): Update to 4.2-0.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus 19fdd77c07
gnu: r-purrr: Update to 0.3.0.
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.0.
[propagated-inputs]: Remove r-tibble.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus c21c5188f4
gnu: r-e1071: Update to 1.7-0.1.
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-0.1.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus 82dad63ef7
gnu: r-rcpparmadillo: Update to 0.9.200.7.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.200.7.0.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus 6d1db05086
gnu: r-openssl: Update to 1.2.1.
* gnu/packages/statistics.scm (r-openssl): Update to 1.2.1.
[native-inputs]: Add pkg-config.
[propagated-inputs]: Add r-askpass.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus 0550c2bf70
gnu: r-checkmate: Update to 1.9.1.
* gnu/packages/statistics.scm (r-checkmate): Update to 1.9.1.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus d0fb25d94a
gnu: r-data-table: Update to 1.12.0.
* gnu/packages/statistics.scm (r-data-table): Update to 1.12.0.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus 5d9b140b29
gnu: r-qtl: Update to 1.44-9.
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.44-9.
2019-01-28 16:27:34 +01:00
Ricardo Wurmus 439d821a3b
gnu: r-optparse: Update to 1.6.1.
* gnu/packages/bioinformatics.scm (r-optparse): Update to 1.6.1.
2019-01-28 16:27:33 +01:00
Ricardo Wurmus 9d3a467214
gnu: Add r-askpass.
* gnu/packages/cran.scm (r-askpass): New variable.
2019-01-28 16:27:33 +01:00
Ricardo Wurmus 2b106a8d71
gnu: Add r-sys.
* gnu/packages/cran.scm (r-sys): New variable.
2019-01-28 16:27:33 +01:00
Ludovic Courtès 7d2be1277b
packages: 'package-input-rewriting' can take a promise.
* guix/packages.scm (package-input-rewriting): Allow REPLACEMENTS to be
a promise.
* gnu/packages/guile.scm (package-for-guile-2.0): Delay the first
argument to 'package-input-rewriting'.
2019-01-28 15:45:48 +01:00
Ludovic Courtès 10b507b234
gnu: Remove now unused 'package-for-guile-2.2' procedure.
* gnu/packages/guile.scm (package-for-guile-2.2): Remove.
2019-01-28 15:45:48 +01:00
Ricardo Wurmus 40864d79fc
gnu: mumi: Update to 0.0.0-3.ea5a738.
* gnu/packages/mail.scm (mumi): Update to 0.0.0-3.ea5a738.
2019-01-28 15:27:16 +01:00
swedebugia cd81199cbd
gnu: artanis: Update to 0.3.1.
* gnu/packages/guile-xyz.scm (artanis): Update to 0.3.1.
[snippet]: Remove bundled guile-redis.
[inputs]: Add guile-redis.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-01-28 15:19:46 +01:00
Ricardo Wurmus 0791437f97
gnu: Move most packages from guile.scm to new module.
* gnu/packages/guile.scm (artanis, guildhall, guile-aspell, guile-bash,
guile-8sync, guile-daemon, guile-dsv, guile-fibers, guile-syntax-highlight,
guile-sjson, guile-colorized, guile-pfds, guile-aa-tree, guile-simple-zmq,
jupyter-guile-kernel, guile-sparql, guile-debbugs, guile-email,
guile-debbugs-next, guile-newt, guile-mastodon, guile-parted, guile-xosd,
guile-dbi, guile-dbd-sqlite3, guile-config, guile-hall, guile-ics, guile-wisp,
guile-sly, g-wrap, guile-miniadapton, guile-reader, guile2.2-reader,
guile-ncurses, guile-ncurses/gpm, guile-lib, guile2.0-lib, guile2.2-lib,
guile-minikanren, guile2.0-minikanren, guile2.2-minikanren, guile-irregex,
guile2.0-irregex, guile2.2-irregex, haunt, guile2.0-haunt, guile2.2-haunt,
guile-redis, guile2.0-redis, guile2.2-redis, guile-commonmark,
guile2.0-commonmark, guile2.2-commonmark, mcron, mcron2): Move these variables
from here...
* gnu/packages/guile-xyz.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/installer.scm,
gnu/packages/bioinformatics.scm,
gnu/packages/ci.scm,
gnu/packages/gtk.scm,
gnu/packages/guile.scm,
gnu/packages/mail.scm,
gnu/packages/package-management.scm,
gnu/packages/skribilo.scm,
gnu/packages/web.scm,
gnu/services/mcron.scm: Update module references.
2019-01-28 14:57:10 +01:00
Ricardo Wurmus 415ae33073
gnu: python-discover: Use PYPI-URI.
* gnu/packages/check.scm (python-discover)[source]: Use PYPI-URI.
2019-01-28 13:41:38 +01:00
Ricardo Wurmus cb539b7c12
gnu: python-testlib: Use PYPI-URI.
* gnu/packages/check.scm (python-testlib)[source]: Use PYPI-URI.
2019-01-28 13:41:06 +01:00
Ricardo Wurmus 9fcedf0792
gnu: python-testrepository-bootstrap: Use PYPI-URI.
* gnu/packages/check.scm (python-testrepository-bootstrap)[source]: Use
PYPI-URI.
2019-01-28 13:40:16 +01:00
Ricardo Wurmus 6571bba06b
gnu: python2-jsonrpclib: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python2-jsonrpclib)[source]: Use PYPI-URI.
2019-01-28 12:24:26 +01:00
Ricardo Wurmus 0ca1d040d7
gnu: python-pykafka: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python-pykafka)[source]: Use PYPI-URI.
2019-01-28 12:24:26 +01:00
Ricardo Wurmus b0758fbb66
gnu: python-configobj: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python-configobj)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus 9f1f22ee70
gnu: python-pretend: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python-pretend)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus 337c3a1e6c
gnu: python-prettytable: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python-prettytable)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus 8c4dffb50e
gnu: python-pyflakes-0.8.1: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python-pyflakes-0.8.1)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus f3576970e5
gnu: python-pep8-1.5.7: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python-pep8-1.5.7)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus c9671d4bb2
gnu: python-ipython-genutils: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python-ipython-genutils)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus 6c8c3980a9
gnu: python-simplegeneric: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python-simplegeneric)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus 5182927c44
gnu: python-markupsafe: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python-markupsafe)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus 786ccb87f0
gnu: python-jsonschema: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python-jsonschema)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus 89bf667caf
gnu: python-mimeparse: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python-mimeparse)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus 1cc184e6eb
gnu: python2-mechanize: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python2-mechanize)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus 8318bf0740
gnu: python-lockfile: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python-lockfile)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus 2c1f0d09c2
gnu: python2-backport-ssl-match-hostname: Use PYPI-URI.
* gnu/packages/python-xyz.scm (python2-backport-ssl-match-hostname)[source]:
Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus fc283a5e0a
gnu: python-zope-security: Use PYPI-URI.
* gnu/packages/python-web.scm (python-zope-security)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus 6e6bbc0274
gnu: python-zope-location: Use PYPI-URI.
* gnu/packages/python-web.scm (python-zope-location)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus 510cacc7ea
gnu: python-zope-proxy: Use PYPI-URI.
* gnu/packages/python-web.scm (python-zope-proxy)[source]: Use PYPI-URI.
2019-01-28 12:24:25 +01:00
Ricardo Wurmus cdf14a6745
gnu: python-zope-configuration: Use PYPI-URI.
* gnu/packages/python-web.scm (python-zope-configuration)[source]: Use
PYPI-URI.
2019-01-28 12:24:24 +01:00
Ricardo Wurmus ab9e1740bb
gnu: python-zope-schema: Use PYPI-URI.
* gnu/packages/python-web.scm (python-zope-schema)[source]: Use PYPI-URI.
2019-01-28 12:24:24 +01:00
Ricardo Wurmus 8a84d796b0
gnu: python-zope-i18nmessageid: Use PYPI-URI.
* gnu/packages/python-web.scm (python-zope-i18nmessageid)[source]: Use PYPI-URI.
2019-01-28 12:24:24 +01:00
Ricardo Wurmus d409c993a0
gnu: python-zope-testrunner: Use PYPI-URI.
* gnu/packages/python-web.scm (python-zope-testrunner)[source]: Use PYPI-URI.
2019-01-28 12:24:24 +01:00
Ricardo Wurmus 3d010466e6
gnu: python-zope-exceptions: Use PYPI-URI.
* gnu/packages/python-web.scm (python-zope-exceptions)[source]: Use PYPI-URI.
2019-01-28 12:24:24 +01:00
Ricardo Wurmus ba93e239eb
gnu: python-zope-interface: Use PYPI-URI.
* gnu/packages/python-web.scm (python-zope-interface)[source]: Use PYPI-URI.
2019-01-28 12:24:24 +01:00
Ricardo Wurmus da501c49f3
gnu: python-zope-event: Use PYPI-URI.
* gnu/packages/python-web.scm (python-zope-event)[source]: Use PYPI-URI.
2019-01-28 12:24:24 +01:00
Ricardo Wurmus 2b22186679
gnu: python-wsgi-intercept: Use PYPI-URI.
* gnu/packages/python-web.scm (python-wsgi-intercept)[source]: Use PYPI-URI.
2019-01-28 12:24:24 +01:00
Pierre Neidhardt 562d13e16a
gnu: Add xf86-video-amdgpu.
* gnu/packages/xorg.scm (xf86-video-amdgpu): New variable.
2019-01-28 11:08:24 +01:00
Björn Höfling 818f317a4d
gnu: Krita: Update to 4.1.7.101.
* gnu/packages/kde.scm (krita): Update to 4.1.7.101.
2019-01-28 09:43:53 +01:00
Rutger Helling 6ea1c6fc31
gnu: mgba: Update to 0.7.0.
* gnu/packages/emulators.scm (mgba): Update to 0.7.0.
[source]: Use git-fetch.
[arguments]: Remove "-DCMAKE_INSTALL_LIBDIR" configuration flag.
2019-01-28 09:17:39 +01:00
Ricardo Wurmus 86228e569b
gnu: python-ecdsa: Use PYPI-URI.
* gnu/packages/python-crypto.scm (python-ecdsa)[source]: Use PYPI-URI.
2019-01-27 22:39:24 +01:00
Ricardo Wurmus 27864e7c6c
gnu: python-py-bcrypt: Use PYPI-URI.
* gnu/packages/python-crypto.scm (python-py-bcrypt)[source]: Use PYPI-URI.
2019-01-27 22:39:24 +01:00
Ricardo Wurmus 6feb86f442
gnu: grantlee: Fetch sources via git.
* gnu/packages/qt.scm (grantlee)[source]: Fetch via git.
2019-01-27 22:39:24 +01:00
Efraim Flashner 4f8be6d905
gnu: python-flask-restful: Update to 0.3.7.
* gnu/packages/python-web.scm (python-flask-restful): Update to 0.3.7.
2019-01-27 14:41:04 +02:00
Efraim Flashner 2066975041
gnu: python-cryptography, python-cryptography-vectors: Update to 2.5.
* gnu/packages/python-crypto.scm (python-cryptography,
python-cryptography-vectors): Update to 2.5.
2019-01-27 12:48:41 +02:00
Efraim Flashner 92d9104d9c
gnu: python-bcrypt: Update to 3.1.6.
* gnu/packages/python-crypto.scm (python-bcrypt): Update to 3.1.6.
2019-01-27 12:48:41 +02:00
Efraim Flashner 20c5e2f4ef
gnu: python-urllib3: Update to 1.24.1.
* gnu/packages/python-web.scm (python-urllib3): Update to 1.24.1.
[native-inputs]: Remove python-nose, add python-pytest.
[propagated-inputs]: Add python-pysocks.
[home-page]: Update home-page url.
2019-01-27 12:48:41 +02:00
Efraim Flashner eba8a00d84
gnu: python-flaky: Update to 3.5.3.
* gnu/packages/check.scm (python-flaky): Update to 3.5.3.
2019-01-27 12:48:41 +02:00
Efraim Flashner 3fcaf42a1c
gnu: python-tornado: Update to 5.1.1.
* gnu/packages/python-web.scm (python-tornado): Update to 5.1.1.
[propagated-inputs]: Move python-backports-abc to python2-tornado only.
[home-page]: Use https.
2019-01-27 12:48:40 +02:00
Efraim Flashner 474039554d
gnu: python-flask: Run test suite.
* gnu/packages/python-web.scm (python-flask)[arguments]: Use custom
'check phase.
[native-inputs]: Add python-pytest.
2019-01-27 12:48:40 +02:00
Efraim Flashner 67eda45bbb
gnu: python-flask: Update to 1.0.2.
* gnu/pacakges/python-web.scm (python-flask): Update to 1.0.2.
[home-page]: Update to new home-page.
2019-01-27 12:48:40 +02:00
Efraim Flashner c5e110ce95
gnu: python-werkzeug: Update to 0.14.1.
* gnu/packages/python-web.scm (python-werkzeug): Update to 0.14.1.
[arguments]: Run tests after 'install phase. Use custom 'check phase.
[propagated-inputs]: Add python-requests.
[home-page]: Update to new home-page.
2019-01-27 12:48:40 +02:00
Efraim Flashner 8d7e7ca6a1
gnu: python-click: Enable tests.
* gnu/packages/python-xyz.scm (python-click)[arguments]: Enable tests.
Add custom 'check phase.
2019-01-27 12:48:39 +02:00
Efraim Flashner 619848558e
gnu: python-click: Update to 7.0.
* gnu/packages/python-xyz.scm (python-click): Update to 7.0.
[home-page]: Update to new home-page.
2019-01-27 12:48:39 +02:00
Efraim Flashner acfcf2ed64
gnu: python-itsdangerous: Update to 1.1.0.
* gnu/packages/python-xyz.scm (python-itsdangerous): Update to 1.1.0.
[source]: Use pypi uri.
[home-page]: Update to new home-page.
2019-01-27 12:48:39 +02:00
Efraim Flashner a7f1b7188d
gnu: python-entrypoints: Update to 0.3.
* gnu/packages/python-xyz.scm (python-entrypoints): Update to 0.3.
[source]: Use pypi uri.
2019-01-27 12:48:36 +02:00
Mark H Weaver 9f92038029
gnu: linux-libre: Update to 4.20.5.
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.20.5.
(%linux-libre-hash): Update hash.
2019-01-27 02:02:24 -05:00
Mark H Weaver 0ee0ea706f
gnu: linux-libre@4.19: Update to 4.19.18.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.18.
(%linux-libre-4.19-hash): Update hash.
2019-01-27 02:01:35 -05:00
Mark H Weaver 94711cd6db
gnu: linux-libre@4.14: Update to 4.14.96.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.96.
(%linux-libre-4.14-hash): Update hash.
2019-01-27 02:00:34 -05:00
Mark H Weaver f5e592759a
gnu: linux-libre@4.9: Update to 4.9.153.
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.153.
2019-01-27 01:59:45 -05:00
Mark H Weaver 12e97f3640
gnu: linux-libre@4.4: Update to 4.4.172.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.172.
2019-01-27 01:58:58 -05:00
Maxim Cournoyer 78f609165d
gnu: supercollider: Update to 3.10.1.
* gnu/packages/audio.scm (supercollider): Update to 3.10.1.
2019-01-26 23:48:21 -05:00
Eric Bavier c2ab3b8439
gnu: Add stoken.
* gnu/packages/crypto.scm (stoken): New variable.
2019-01-26 17:40:17 -06:00
Ludovic Courtès df09e1d6e7
gnu: telepathy-glib: Build sequentially.
* gnu/packages/glib.scm (telepathy-glib)[arguments]: Pass
 #:parallel-build? #f.
2019-01-27 00:18:46 +01:00
Efraim Flashner 770b1d65b1
gnu: python-keyring: Enable tests.
* gnu/packages/python-crypto.scm (python-keyring)[arguments]: Enable
tests.
[native-inputs]: Add python-pytest, python-pytest-runner.
2019-01-27 00:06:11 +02:00
Ricardo Wurmus 8924e3fd9a
gnu: guile-for-guile-emacs: Remove redundant build phases.
* gnu/packages/guile.scm (guile-for-guile-emacs)[arguments]: Remove build
phases "autogen" and "patch-/bin/sh".
2019-01-26 22:39:16 +01:00
Ricardo Wurmus 4aa266a0c6
gnu: stress-make: Use INVOKE.
* gnu/packages/debug.scm (stress-make)[arguments]: Use INVOKE.
2019-01-26 22:34:04 +01:00