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Author SHA1 Message Date
Ludovic Courtès e2aace769c gnu: glibc-locales: Update to glibc 2.22. 
* gnu/packages/base.scm (glibc-locales)[arguments]: Remove
  'delete-file-recursively' call from 'build' phase.
* gnu/packages/patches/glibc-locales.patch: Adjust to glibc 2.22.
 2015-09-25 17:02:13 +02:00
Mark H Weaver bd90127ad4 Merge branch 'master' into core-updates 2015-09-22 16:38:48 -04:00
Ludovic Courtès 1def6f6b2c gnu: pixman: Work around pointer arithmetic bug. 
* gnu/packages/patches/pixman-pointer-arithmetic.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/xdisorg.scm (pixman)[source]: Use it.
 2015-09-21 16:01:45 +02:00
Mark H Weaver 65d54af49f gnu: icu4c: Add fixes for CVE-2014-6585 and CVE-2015-1270. 
* gnu/packages/patches/icu4c-CVE-2014-6585.patch,
  gnu/packages/patches/icu4c-CVE-2015-1270.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/icu4c.scm (icu4c)[source]: Add patches.
 2015-09-19 21:35:18 -04:00
Andreas Enge e49b339608 gnu: libmtp: Add additional MTP devices. 
* gnu/packages/patches/libmtp-devices.patch: New file.
* gnu-system.am (dist_patch_DATA): Register patch.
* gnu/packages/patches/libmtp-devices.patch (libmtp)[source]: Add patch.
 2015-09-19 23:38:51 +02:00
Ludovic Courtès 2ed74cea5c gnu: imagemagick: Update to 6.9.2-1. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.2-1.
  [source]: Add imagemagick-test-segv.patch.
  [inputs]: Replace LIBJPEG-8 with LIBJPEG.
 2015-09-16 17:59:16 +02:00
Mark H Weaver 1d6c8db57c gnu: valgrind: Adapt to glibc-2.22 and linux-libre-4.x. 
* gnu/packages/patches/valgrind-glibc-2.21.patch: Rename to ...
  gnu/packages/patches/valgrind-glibc-2.22.patch: ... this, and add a case for
  glibc-2.22.
* gnu/packages/patches/valgrind-linux-libre-4.x.patch: New file.
* gnu-system.am (dist_patch_DATA): Add the new file, and rename the other one.
* gnu/packages/valgrind.scm (valgrind)[source]: Add new patch.
 2015-09-15 18:21:16 -04:00
Mark H Weaver 40f4817846 gnu: util-linux: Adapt util-linux-tests.patch to version 2.27. 
This is a followup to commit 57a66c2729.

* gnu/packages/patches/util-linux-tests.patch: Adapt to util-linux 2.27.
 2015-09-15 01:41:57 -04:00
Ludovic Courtès 75710da667 Merge branch 'master' into core-updates 2015-09-13 21:28:01 +02:00
Ludovic Courtès 92d0fcb6dc gnu: cpio: Upgrade to 2.12. 
* gnu/packages/cpio.scm (cpio): Update to 2.12.
  [source]: Remove 'patches' field.
* gnu/packages/patches/cpio-CVE-2014-9112-pt1.patch,
  gnu/packages/patches/cpio-CVE-2014-9112-pt2.patch,
  gnu/packages/patches/cpio-CVE-2014-9112-pt3.patch,
  gnu/packages/patches/cpio-CVE-2014-9112-pt4.patch,
  gnu/packages/patches/cpio-CVE-2014-9112-pt5.patch,
  gnu/packages/patches/cpio-fix-symlink-bad-length-test.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove.
 2015-09-13 21:14:23 +02:00
Ludovic Courtès 895067ff49 gnu: coreutils: Skip racy 'tail' tests. 
This works around <http://bugs.gnu.org/21460>.

* gnu/packages/patches/coreutils-racy-tail-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/base.scm (coreutils): Use it.
 2015-09-11 23:16:37 +02:00
Eric Bavier c6a3635d54 gnu: perl: Fix autosplitting of 0-time source. 
* gnu/packages/patches/perl-autosplit-default-time.patch: New patch.
* gnu/packages/perl.scm (perl): Use it.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-09-10 03:40:34 -05:00
Eric Bavier 8b94dffde8 gnu: gnucash: Add Finance::Quote support. 
* gnu/packages/patches/gnucash-price-quotes-perl.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnucash.scm (gnucash)[source]: Use it.
  [inputs]: Add perl-date-manip and perl-finance-quote.
  [arguments]: Add 'wrap-programs' phase.  Move below inputs.
 2015-09-10 03:21:55 -05:00
Eric Bavier 8b45993235 gnu: Add perl-finance-quote. 
* gnu/packages/web.scm (perl-finance-quote): New variable.
* gnu/packages/patches/perl-finance-quote-unuse-mozilla-ca.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-09-10 03:21:55 -05:00
Ludovic Courtès 784d6e9115 gnu: openssl: Remove run-time dependency on Perl. 
This shrinks the closure of OpenSSL from 154 MiB to 73 MiB.

* gnu/packages/patches/openssl-c-rehash.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (openssl)[source]: Use it.
  [arguments]: Add 'remove-miscellany' phase.
* gnu/packages/certs.scm (nss-certs)[native-inputs]: Add PERL.
 2015-09-09 19:01:48 +02:00
宋文武 363ccf9fe2 gnu: xfce4-settings: Set the default icon theme to "gnome". 
Fixes <http://bugs.gnu.org/21217>.

* gnu/packages/patches/xfce4-settings-defaults.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/xfce.scm (xfce4-settings)[source]: Add patch.
 2015-09-09 21:06:30 +08:00
Ludovic Courtès c5d8e688dc gnu: glibc: Patch 'openat64', which was buggy on 32-bit platforms. 
* gnu/packages/patches/glibc-o-largefile.patch: New file.
* gnu/packages/base.scm (glibc)[source]: Add it to 'patches'.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-09-08 15:53:05 +02:00
Andreas Enge 45468e3649 gnu: libtiff: Update to 4.0.5. 
* gnu/packages/patches/libtiff-CVE-2012-4564.patch,
  gnu/packages/patches/libtiff-CVE-2013-1960.patch,
  gnu/packages/patches/libtiff-CVE-2013-1961.patch,
  gnu/packages/patches/libtiff-CVE-2013-4231.patch,
  gnu/packages/patches/libtiff-CVE-2013-4232.patch,
  gnu/packages/patches/libtiff-CVE-2013-4243.patch,
  gnu/packages/patches/libtiff-CVE-2013-4244.patch,
  gnu/packages/patches/libtiff-CVE-2014-8127-pt1.patch,
  gnu/packages/patches/libtiff-CVE-2014-8127-pt2.patch,
  gnu/packages/patches/libtiff-CVE-2014-8127-pt3.patch,
  gnu/packages/patches/libtiff-CVE-2014-8127-pt4.patch,
  gnu/packages/patches/libtiff-CVE-2014-8128-pt1.patch,
  gnu/packages/patches/libtiff-CVE-2014-8128-pt2.patch,
  gnu/packages/patches/libtiff-CVE-2014-8128-pt3.patch,
  gnu/packages/patches/libtiff-CVE-2014-8128-pt4.patch,
  gnu/packages/patches/libtiff-CVE-2014-8128-pt5.patch,
  gnu/packages/patches/libtiff-CVE-2014-8129.patch,
  gnu/packages/patches/libtiff-CVE-2014-9330.patch,
  gnu/packages/patches/libtiff-CVE-2014-9655.patch: Delete files.
* gnu-system.am (dist_patch_DATA): Unregister the patches.
* gnu/packages/image.scm (libtiff): Update to 4.0.5 and drop the patches.
 2015-09-05 17:58:45 +02:00
Manolis Ragkousis 21a8fe1bf5 gnu: base: Add glibc-hurd and hurd-minimal. 
* gnu/packages/base.scm (glibc/hurd, glibc/hurd-headers): New variables.
* gnu/packages/hurd.scm (hurd-minimal): New variable.
* gnu/packages/patches/glibc-hurd-extern-inline.patch: New file.
* gnu/packages/patches/libpthread-glibc-preparation.patch: New file.
* gnu-system.am (dist_patch_DATA): Add them.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
Co-authored-by: Mark H Weaver <mhw@netris.org>
 2015-09-04 13:50:38 +02:00
Manolis Ragkousis 561840b4aa gnu: acl: Fix i686-gnu build. 
* gnu/packages/patches/acl-hurd-path-max.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-09-04 13:50:38 +02:00
Ludovic Courtès 26ecc2a780 gnu: Add missing patch for Guile-Present. 
This patch should have been added in cdd383e.

* gnu/packages/patches/guile-present-coding.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-09-02 09:50:25 +02:00
Ludovic Courtès 1a51fe2768 gnu: Add Guile-RSVG. 
* gnu/packages/gtk.scm (guile-rsvg): New variable.
* gnu/packages/patches/guile-rsvg-pkgconfig.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-08-31 23:02:29 +02:00
Siniša Biđin 6edb5b7765 gnu: lua: Add patch to generate pkg-config file. 
* gnu/packages/patches/lua-pkgconfig.patch: New file.
* gnu/packages/lua.scm (lua)[source]: Add patch.
* gnu-system.am (dist_patch_DATA): Register patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2015-08-27 23:34:24 +02:00
Mark H Weaver 0058239ed3 gnu: subversion: Update to 1.8.14. 
* gnu/packages/patches/subversion-sqlite-3.8.9-fix.patch: Delete file.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/version-control.scm (subversion): Update to 1.8.14.  Remove
  patch.
 2015-08-21 12:02:22 -04:00
Mark H Weaver 9cdce047d0 gnu: gnutls: Update to 3.4.4.1. 
* gnu/packages/patches/gnutls-doc-fix.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (gnutls): Update to 3.4.4.1.  Add patch.
  [arguments]: Add 'delete-prebuilt-unfixed-info-file' phase.
  In 'move-doc' phase, copy man pages to the correct directory.
  [native-inputs]: Add 'texinfo'.
 2015-08-21 12:02:20 -04:00
Jeff Mickey 08cc159a70 gnu: pavucontrol: Update to 3.0. 
* gnu/packages/pulseaudio.scm (pavucontrol): Update to 3.0.
* gnu/packages/patches/pavucontrol-sigsegv.patch: Remove.
* gnu-system.am (dist_patch_DATA): Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2015-08-20 17:52:29 +02:00
Mark H Weaver 7cb6f648b2 gnu: qemu: Update to 2.3.1. Add fix for CVE-2015-5745. 
* gnu/packages/patches/qemu-CVE-2015-5745.patch: New file.
* gnu/packages/patches/qemu-CVE-2015-3456.patch,
  gnu/packages/patches/qemu-CVE-2015-5154-pt1.patch,
  gnu/packages/patches/qemu-CVE-2015-5154-pt2.patch,
  gnu/packages/patches/qemu-CVE-2015-5154-pt3.patch,
  gnu/packages/patches/qemu-CVE-2015-5158.patch: Delete files.
* gnu-system.am (dist_patch_DATA): Add new file and remove the deleted ones.
* gnu/packages/qemu.scm (qemu): Update to 2.3.1.  Add new patch and remove the
  deleted ones.
 2015-08-18 23:57:25 -04:00
Mark H Weaver 7f1b865819 Revert "PRELIMINARY: gnu: Add network-manager." 
This reverts commit 0f402e4cf8.
 2015-08-18 23:56:10 -04:00
Mark H Weaver 0f402e4cf8 PRELIMINARY: gnu: Add network-manager. 
* gnu/packages/patches/network-manager-platform-managed.patch,
  gnu/packages/network-manager.scm: New files.
* gnu-system.am (GNU_SYSTEM_MODULES): Add network-manager.scm.
  (dist_patch_DATA): Add network-manager-platform-managed.patch.
 2015-08-18 23:52:57 -04:00
宋文武 907f939b9b gnu: glib-networking: Prefer 'SSL_CERT_FILE' as TLS CA file. 
This is an improvement over commit af6100f.

* gnu/packages/gnome.scm (glib-networking)[source](patches): New field.
  [arguments]: Pass '/etc/ssl/certs/ca-certificates.crt' to configure.
  Set 'SSL_CERT_FILE' to '/dev/null' in 'use-empty-ssl-cert-file' phase.
  (libsoup)[arguments]: Set 'SSL_CERT_FILE' to '/dev/null' in
  'pre-check' phase.
* gnu/packages/patches/glib-networking-ssl-cert-file.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-08-14 17:58:48 -04:00
Andreas Enge 6c591c8ed7 gnu: flint: Update to 2.5.2. 
* gnu/packages/algebra.scm (flint): Update to 2.5.2.
* gnu/packages/patches/flint-ldconfig.patch: New file.
* gnu-system.am (dist_patch_DATA): Register the patch.
 2015-08-14 18:14:33 +02:00
Mark H Weaver c037a0f7ce gnu: icecat: Add fixes for CVE-2015-{4473,4482,4488,4489,4491,4492}. 
WARNING: CVE-2015-4473 may not be fully addressed here, because I was unable
to backport some of the patches (for upstream bugs 1182711 and 1146213).  I
was also unable to backport CVE-2015-4484 (upstream bug 1171540) and
CVE-2015-4487 (upstream bug 1171603).  I was unable to find any commit in the
upstream repository that claims to address bug 1105914 (CVE-2015-4478).

* gnu/packages/patches/icecat-CVE-2015-4473-partial.patch,
  gnu/packages/patches/icecat-CVE-2015-4482.patch,
  gnu/packages/patches/icecat-CVE-2015-4488.patch,
  gnu/packages/patches/icecat-CVE-2015-4489.patch,
  gnu/packages/patches/icecat-CVE-2015-4491.patch,
  gnu/packages/patches/icecat-CVE-2015-4492.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.
 2015-08-12 20:37:44 -04:00
Mathieu Lirzin 8cba71c7a0 gnu: ratpoison: Update to 1.4.8. 
* gnu/packages/ratpoison.scm (ratpoison): Update to 1.4.8.
* gnu/packages/patches/ratpoison-shell.patch: Adapt to it.
 2015-08-12 15:30:04 +02:00
Mark H Weaver ae4784af54 gnu: wicd: Fix bugs in curses interface program. 
* gnu/packages/patches/wicd-bitrate-none-fix.patch,
  gnu/packages/patches/wicd-get-selected-profile-fix.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/wicd.scm (wicd)[source]: Add patches.
 2015-08-12 00:22:02 -04:00
Mark H Weaver a5e55dfbb7 gnu: icecat: Add fix for CVE-2015-4495. 
* gnu/packages/patches/icecat-CVE-2015-4495.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.  Move the 'patches'
  field above the snippet.
 2015-08-07 23:08:41 -04:00
Eric Dvorsak ff6f33cf80 gnu: python-2: Update to 2.7.10. 
* gnu/packages/patches/python2-sqlite-3.8.4-test-fix.patch,
  gnu/packages/patches/python-libffi-mips-n32-fix.patch: Remove files.
* gnu-system.am (dist_patch_DATA): Remove them.
* gnu/packages/python.scm (python-2): Update to 2.7.10.  Remove patches.
  Update comment showing test failures.
 2015-08-06 16:33:54 -04:00
Mark H Weaver b1a2bc895a gnu: Add pidgin. 
* gnu/packages/patches/pidgin-add-search-path.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/messaging.scm (pidgin): New variable.
 2015-08-04 16:21:17 -04:00
Mark H Weaver d2892f3a2d gnu: icu4c: Add fix for CVE-2015-4760. 
* gnu/packages/patches/icu4c-CVE-2015-4760.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/icu4c.scm (icu4c)[source]: Add patch.
 2015-08-03 02:10:14 -04:00
Federico Beffa 23bae7bb86 gnu: Add fasthenry. 
* gnu/packages/engineering.scm (fasthenry): New variable.
* gnu/packages/patches/fasthenry-spAllocate.patch,
  gnu/packages/patches/fasthenry-spBuild.patch,
  gnu/packages/patches/fasthenry-spFactor.patch,
  gnu/packages/patches/fasthenry-spSolve.patch,
  gnu/packages/patches/fasthenry-spUtils.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
 2015-08-01 12:29:37 +02:00
Federico Beffa 930945015c gnu: Add fastcap. 
* gnu/packages/engineering.scm (fastcap): New variable.
  (broken-tarball-fetch): New function.  Suggested by Ludovic Courtès
  <ludo@gnu.org>.
* gnu/packages/patches/fastcap-mulGlobal.patch,
  gnu/packages/patches/fastcap-mulSetup.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
 2015-08-01 12:29:37 +02:00
Mark H Weaver 99e29da156 gnu: expat: Add fix for CVE-2015-1283. 
* gnu/packages/patches/expat-CVE-2015-1283.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/xml.scm (expat)[source]: Add patch.
 2015-07-30 08:21:28 -04:00
Mark H Weaver 7ef4119f0a gnu: qemu: Add fixes for CVE-2015-5154 and CVE-2015-5158. 
* gnu/packages/patches/qemu-CVE-2015-5154-pt1.patch,
  gnu/packages/patches/qemu-CVE-2015-5154-pt2.patch,
  gnu/packages/patches/qemu-CVE-2015-5154-pt3.patch,
  gnu/packages/patches/qemu-CVE-2015-5158.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/qemu.scm (qemu-headless)[source]: Add patches.
 2015-07-27 18:50:35 -04:00
Andreas Enge 44a477e1ac gnu: liblxqt: Fix build with Qt 5.5. 
* gnu/packages/patches/liblxqt-include.patch: New file.
* gnu-system.am (dist_patch_DATA): Register patch.
* gnu/packages/lxqt.scm (liblxqt)[source]: Use patch.
 2015-07-27 22:54:58 +02:00
Mark H Weaver 35a12b4719 gnu: ghostscript: Add fix for CVE-2015-3228. 
* gnu/packages/patches/ghostscript-CVE-2015-3228.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/ghostscript.scm (ghostscript)[source]: Add patch.
 2015-07-27 04:38:44 -04:00
Andreas Enge f7fb0ccb69 gnu: qt: Update to 5.5.0. 
* gnu/packages/qt.scm (qt): Update to 5.5.0. Update download location.
  Drop patch and snippet.
  [arguments]: Add configure flag to drop qtwebengine module bundling
  chromium.
  [native-inputs]: Drop ninja, needed only for qtwebengine.
  [inputs]: Add harfbuzz to avoid use of bundled copy.
  (qt-4)[inputs]: Remove inherited harfbuzz again.
* gnu/packages/patches/qt5-conflicting-typedefs.patch: Delete file.
* gnu-system.am (dist_patch_DATA): Unregister patch.
* gnu/packages/patches/qt5-runpath.patch: Adapt patch.
 2015-07-27 09:41:16 +02:00
Andreas Enge a060ca3201 gnu: avidemux: Install libraries to lib. 
* gnu/packages/video.scm (avidemux)[source]: Add patch to install to lib
  directory instead of lib64 or lib32 depending on the architecture.
  [arguments]: Use the lib instead of the lib64 directory for flags in the
  build phase, so that these flags should now also work on i686.
* gnu/packages/patches/avidemux-install-to-lib.patch: New file.
* gnu-system.am (dist_patch_DATA): Register it.
 2015-07-26 15:24:20 +02:00
Ben Woodcroft b81cb1f2f3 gnu: bedtools: Add patch to fix compilation on 32 bit systems. 
* gnu/packages/patches/bedtools-32bit-compilation.patch: New file.
* gnu/packages/bioinformatics.scm (bedtools)[source]: Add patch.
* gnu-system.am (dist_patch_DATA): Register patch.

Signed-off-by: Andreas Enge <andreas@enge.fr>
 2015-07-25 19:16:49 +02:00
Andreas Enge d0dfc06683 gnu: ripperX: Update to 2.8.0. 
* gnu/packages/mp3.scm (ripperx): Update to 2.8.0. Drop one patch and
  add another one.
* gnu/packages/patches/ripperx-libm.patch: Remove file.
* gnu/packages/patches/ripperx-missing-file.patch: New file.
* gnu-system.am (dist_patch_DATA): Register one patch and unregister the
  other.
 2015-07-24 21:16:29 +02:00
Ludovic Courtès 47e0ba8fe5 gnu: clang: Disable distro detection and remove FHS assumptions. 
* gnu/packages/patches/clang-libc-search-path.patch: Disable distro detection
  and remove hard-coded FHS file names, both of which would lead to breakage
  on non-GuixSD systems.
 2015-07-24 17:29:37 +02:00
Ludovic Courtès 7e96eb1a08 gnu: guile-static: Add 'umount' procedure. 
* gnu/packages/patches/guile-linux-syscalls.patch: Add 'umount' subr.
 2015-07-24 01:19:57 +02:00
Andreas Enge 1436c5c7e8 gnu: teckit: Update to 2.5.4. 
* gnu/packages/fontutils.scm (teckit): Update to 2.5.4. Drop patch.
  Use svn-fetch for download.
  [arguments]: Add phase to call autogen.
  [native-inputs]: New field.
* gnu/packages/patches/teckit-cstdio.patch: Delete file.
* gnu-system.am (dist_patch_DATA): Unregister patch.
 2015-07-22 19:29:17 +02:00
Ricardo Wurmus 5ff0edaee6 gnu: julia: Update to 0.3.10. 
* gnu/packages/julia.scm (julia): Update to 0.3.10.
* gnu/packages/patches/julia-0.3.10-fix-empty-array.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-07-21 10:33:59 +02:00
Mark H Weaver c0eac5a862 gnu: libmad: Apply fixes for ARMv7 Thumb, etc. 
* gnu/packages/patches/libmad-armv7-thumb-pt1.patch,
  gnu/packages/patches/libmad-armv7-thumb-pt2.patch,
  gnu/packages/patches/libmad-frame-length.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/mp3.scm (libmad)[source]: Add patches.
 2015-07-21 02:05:20 -04:00
Mark H Weaver 4d85391059 gnu: tidy: Add fixes for CVE-2015-5522 and CVE-2015-5523. 
* gnu/packages/patches/tidy-CVE-2015-5522+5523.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/web.scm (tidy)[source]: Add patch.
 2015-07-20 23:33:41 -04:00
Mark H Weaver 1b4e48d498 Merge branch 'master' into core-updates 2015-07-19 18:12:34 -04:00
Ludovic Courtès 2e839545c7 gnu: ninja: Do not report files with mtime = 0 as missing. 
This is a followup to 47f315a.

* gnu/packages/patches/ninja-zero-mtime.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/ninja.scm (ninja)[source]: Reinstate 'patches' field and add
  this patch.
  [arguments]: Remove 'apply-ninja-tests.patch' phase.
 2015-07-18 23:27:18 +02:00
Ludovic Courtès 82700f0fb3 gnu: crda: Add forgotten patch. 
This file should have been added as part of commit cc205da.

* gnu/packages/patches/crda-optional-gcrypt.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-07-18 17:15:03 +02:00
Mark H Weaver 2fdc682742 gnu: icecat: Add patch to adapt to freetype 2.6. 
* gnu/packages/patches/icecat-freetype-2.6.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.
 2015-07-17 01:42:35 -04:00
Ludovic Courtès 81e558fdb1 gnu: subversion: Skip the faulty test. 
The added patch from upstream didn't help, nor did downgrading to SQLite
3.8.9.  Thus, shamelessly skip the offending test.

* gnu/packages/patches/subversion-sqlite-3.8.9-fix.patch: Add one hunk to skip
  the faulty test, and another one from upstream.
 2015-07-16 23:33:15 +02:00
Mark H Weaver 385ae063c9 gnu: unzip: Fix CVE-2014-9636 and some other bugs. 
* gnu/packages/patches/unzip-CVE-2014-9636.patch,
  gnu/packages/patches/unzip-allow-greater-hostver-values.patch,
  gnu/packages/patches/unzip-increase-size-of-cfactorstr.patch,
  gnu/packages/patches/unzip-initialize-symlink-flag.patch,
  gnu/packages/patches/unzip-remove-build-date.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/zip.scm (unzip)[source]: Add patches.
  [arguments]: Use 'modify-phases'.  Remove custom 'configure' phase; pass
  additional make-flags instead.  Add custom 'build' phase that builds
  "generic_gcc" target; remove "generic_gcc" from make-flags.
 2015-07-15 23:02:27 -04:00
Mark H Weaver 368474150b Merge branch 'master' into core-updates 2015-07-15 16:11:13 -04:00
Mark H Weaver b76c415253 gnu: icecat: Update to 31.8.0-gnu1. 
* gnu/packages/patches/icecat-enable-acceleration-and-webgl.patch: New file.
* gnu/packages/patches/icecat-CVE-2015-2722-pt1.patch,
  gnu/packages/patches/icecat-CVE-2015-2722-pt2.patch,
  gnu/packages/patches/icecat-CVE-2015-2724-pt1.patch,
  gnu/packages/patches/icecat-CVE-2015-2724-pt2.patch,
  gnu/packages/patches/icecat-CVE-2015-2724-pt3.patch,
  gnu/packages/patches/icecat-CVE-2015-2724-pt4.patch,
  gnu/packages/patches/icecat-CVE-2015-2728-pt1.patch,
  gnu/packages/patches/icecat-CVE-2015-2728-pt2.patch,
  gnu/packages/patches/icecat-CVE-2015-2733-pt1.patch,
  gnu/packages/patches/icecat-CVE-2015-2733-pt2.patch,
  gnu/packages/patches/icecat-CVE-2015-2735.patch,
  gnu/packages/patches/icecat-CVE-2015-2736.patch,
  gnu/packages/patches/icecat-CVE-2015-2738.patch,
  gnu/packages/patches/icecat-CVE-2015-2739.patch,
  gnu/packages/patches/icecat-CVE-2015-2740.patch,
  gnu/packages/patches/icecat-CVE-2015-2743.patch: Remove files.
* gnu-system.am (dist_patch_DATA): Remove them, and add the new file.
* gnu/packages/gnuzilla.scm (icecat): Update to 31.8.0-gnu1.  Remove the
  outdated patches and add the new one.
 2015-07-15 15:43:23 -04:00
Mark H Weaver 35995769b5 Merge branch 'master' into core-updates 2015-07-15 15:10:32 -04:00
Andreas Enge 8d662672fc gnu: boost: Patch to avoid -m32 flag on mips. 
* gnu/packages/patches/boost-mips-avoid-m32.patch: New file.
* gnu-system.am (dist_patch_DATA): Register patch.
* gnu/packages/boost.scm (boost): Use it.
 2015-07-13 14:53:38 -04:00
Mark H Weaver 79e09ef2fd gnu: gettext: Update to 0.19.5. 
* gnu/packages/patches/gettext-msgunfmt.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/gettext.scm (gnu-gettext): Update to 0.19.5.  Remove patch.
 2015-07-10 23:47:07 -04:00
Mark H Weaver c2ba49ef8e gnu: coreutils: Update to 8.24. 
* gnu/packages/patches/coreutils-dummy-man.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/base.scm (coreutils): Update to 8.24.  Remove patch.
 2015-07-10 23:47:07 -04:00
Mark H Weaver 9fb00f383d gnu: wpa-supplicant: Fix WPS and P2P NFC NDEF record payload length validation. 
* gnu/packages/patches/wpa-supplicant-2015-5-fix.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (wpa-supplicant-light)[source]: Add patch.
 2015-07-08 18:27:37 -04:00
Ricardo Wurmus 56e373ef75 gnu: Add preseq. 
* gnu/packages/bioinformatics.scm (preseq): New variable.
* gnu/packages/patches/preseq-1.0.2-install-to-PREFIX.patch: New file.
* gnu/packages/patches/preseq-1.0.2-link-with-libbam.patch: New file.
* gnu-system.am (dist_patch_DATA): Add them.
 2015-07-08 17:05:00 +02:00
Mark H Weaver 23da88f61e gnu: liba52: Build shared library. 
* gnu/packages/patches/liba52-enable-pic.patch,
  gnu/packages/patches/liba52-link-with-libm.patch,
  gnu/packages/patches/liba52-set-soname.patch,
  gnu/packages/patches/liba52-use-mtune-not-mcpu.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/video.scm (liba52)[source]: Add patches.
  [native-inputs]: Add autoconf, automake, and libtool.
  [arguments]: Add "--enable-shared" to configure-flags.
  Add 'bootstrap' phase.
 2015-07-07 10:52:04 -04:00
Mark H Weaver 48cfe294b0 gnu: icecat: Apply more libvpx-1.4 fixes. 
This is a followup to commit c803ffcb3a.

* gnu/packages/patches/icecat-libvpx-1.4.patch: Augment existing patch to
  include fixes for content/media/encoder/VP8TrackEncoder.cpp.
 2015-07-07 02:59:59 -04:00
Mark H Weaver c803ffcb3a gnu: icecat: Fix build against libvpx 1.4. 
* gnu/packages/patches/icecat-libvpx-1.4.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.
 2015-07-06 23:01:56 -04:00
Mark H Weaver 723e886656 gnu: libvpx: Update to 1.4.0. 
* gnu/packages/patches/libvpx-fix-armhf-link.patch,
  gnu/packages/patches/libvpx-fix-ssse3-quantize.patch,
  gnu/packages/patches/libvpx-vp9-out-of-bounds-access.patch: Remove files.
* gnu-system.am (dist_patch_DATA): Remove them.
* gnu/packages/video.scm (libvpx): Update to 1.4.0.  Remove patches.  Update
  source URI.
 2015-07-06 21:17:05 -04:00
Mark H Weaver 9ed5486439 gnu: libwmf: Fix CVE-2006-3376, CVE-2009-1364, CVE-2015-{0848,4588,4695,4696}. 
* gnu/packages/patches/libwmf-CVE-2006-3376.patch,
  gnu/packages/patches/libwmf-CVE-2009-1364.patch,
  gnu/packages/patches/libwmf-CVE-2015-0848+4588+4695+4696.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libwmf)[source]: Add patches.
 2015-07-06 20:04:50 -04:00
Mark H Weaver 4463c0d216 gnu: icecat: Fix CVE-2015-{2722,2724,2728,2733,2735,2736,2738,2739,2740,2743}. 
* gnu/packages/patches/icecat-CVE-2015-2722-pt1.patch,
  gnu/packages/patches/icecat-CVE-2015-2722-pt2.patch,
  gnu/packages/patches/icecat-CVE-2015-2724-pt1.patch,
  gnu/packages/patches/icecat-CVE-2015-2724-pt2.patch,
  gnu/packages/patches/icecat-CVE-2015-2724-pt3.patch,
  gnu/packages/patches/icecat-CVE-2015-2724-pt4.patch,
  gnu/packages/patches/icecat-CVE-2015-2728-pt1.patch,
  gnu/packages/patches/icecat-CVE-2015-2728-pt2.patch,
  gnu/packages/patches/icecat-CVE-2015-2733-pt1.patch,
  gnu/packages/patches/icecat-CVE-2015-2733-pt2.patch,
  gnu/packages/patches/icecat-CVE-2015-2735.patch,
  gnu/packages/patches/icecat-CVE-2015-2736.patch,
  gnu/packages/patches/icecat-CVE-2015-2738.patch,
  gnu/packages/patches/icecat-CVE-2015-2739.patch,
  gnu/packages/patches/icecat-CVE-2015-2740.patch,
  gnu/packages/patches/icecat-CVE-2015-2743.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.
 2015-07-04 05:44:10 -04:00
Ludovic Courtès b5b08878b6 gnu: mutt: Don't retain reference to GCC. 
* gnu/packages/patches/mutt-store-references.patch: New file.
* gnu/packages/mail.scm (mutt)[source]: Use it.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-07-03 15:28:06 +02:00
Eric Bavier a17d45641b gnu: Add deal.II. 
* gnu/packages/maths.scm (dealii, dealii-openmpi): New variables.
* gnu/packages/patches/dealii-p4est-interface.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-06-29 15:34:36 -05:00
Eric Bavier 9a899cceab gnu: petsc: Upgrade to 3.6.0. 
* gnu/packages/maths.scm (petsc): Upgrade to 3.6.0.
* gnu/packages/patches/petsc-fix-threadcomm.patch: Delete patch.
* gnu-system.am (dist_patch_DATA): Remove it.
 2015-06-29 15:34:36 -05:00
Eric Bavier cec86422b7 gnu: Add MUMPS. 
* gnu/packages/maths.scm (mumps, mumps-metis, mumps-openmpi)
  (mumps-metis-openmpi): New variables.
* gnu/packages/patches/mumps-build-parallelism.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-06-29 15:34:36 -05:00
Eric Bavier 6c7985408f gnu: Update scotch to 6.0.4. 
* gnu/packages/maths.scm (scotch): Update to 6.0.4.
  [arguments]: Add -fPIC to CFLAGS.
* gnu/packages/patches/scotch-test-threading.patch: Adjust patch for a
  new set of test fixes.
* gnu/packages/patches/pt-scotch-build-parallelism.patch: New patch.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-06-29 15:34:36 -05:00
Eric Bavier ce7d9c989d gnu: hwloc: Upgrade to 1.10.1. 
* gnu/packages/patches/hwloc-gather-topology-lstopo.patch: New patch.
* gnu/packages/mpi.scm (hwloc): Upgrade to 1.10.1.
  [source]: Use patch.
  [propagated-inputs]: Remove libpci.
  [inputs]: Add libpciaccess.
* gnu-system.am (dist_patch_DATA): Add patch.
 2015-06-29 15:34:36 -05:00
Ricardo Wurmus 74e03fccd3 gnu: r: Update to 3.2.1. 
* gnu/packages/statistics.scm (r): Update to 3.2.1.
* gnu/packages/patches/r-fix-15899.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
 2015-06-29 16:13:28 +02:00
Ricardo Wurmus cc6ed47737 gnu: Add plink. 
* gnu/packages/bioinformatics.scm (plink): New variable.
* gnu/packages/patches/plink-1.07-unclobber-i.patch: New file.
 2015-06-29 12:54:48 +02:00
Mark H Weaver bf76d98789 Merge branch 'master' into core-updates 2015-06-21 14:30:22 -04:00
Mark H Weaver 180a93c72a gnu: gsl: Fix poly test on i686. 
* gnu/packages/patches/gsl-poly-test-fix-pt1.patch,
  gnu/packages/patches/gsl-poly-test-fix-pt2.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/maths.scm (gsl)[source]: Add patches.
 2015-06-20 01:38:56 -04:00
Mark H Weaver 9a6953d28a gnu: mdadm: Add compilation fix for gcc-4.9. 
* gnu/packages/patches/mdadm-gcc-4.9-fix.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (mdadm): Add patch.
 2015-06-19 22:42:12 -04:00
Ludovic Courtès fd6ae1b983 gnu: clang: Allow 'clang' to link executables. 
* gnu/packages/patches/clang-libc-search-path.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/llvm.scm (clang-from-llvm)[source]: Use it.
  [inputs]: Add "gcc-lib".
  [arguments]. Add -DGCC_INSTALL_PREFIX and -DC_INCLUDE_DIRS to
  #:configure-flags.  Add #:phases argument.
 2015-06-19 17:23:48 +02:00
David Thompson 5fd77f3f43 gnu: Make 'mount' interface in static Guile consistent with Guix API. 
Rather than expecting a pointer, the version of 'mount' in
guile-static-stripped now takes a string for the 'options' argument, just like
the 'mount' procedure in (guix build syscalls).

* gnu/packages/patches/guile-linux-syscalls.patch (mount): Expect a string or
  #f for 'options' argument.
* gnu/build/file-systems.scm (mount-file-system): Use new 'mount' interface.
 2015-06-19 07:49:18 -04:00
Mark H Weaver 9ae1e92071 gnu: cpio: Fix symlink-bad-length test. 
* gnu/packages/patches/cpio-fix-symlink-bad-length-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/cpio.scm (cpio): Add patch.
 2015-06-17 23:19:02 -04:00
Mark H Weaver 8e28d22c91 gnu: libtiff: Add fixes for several CVEs. 
* gnu/packages/patches/libtiff-CVE-2012-4564.patch,
  gnu/packages/patches/libtiff-CVE-2013-1960.patch,
  gnu/packages/patches/libtiff-CVE-2013-1961.patch,
  gnu/packages/patches/libtiff-CVE-2013-4231.patch,
  gnu/packages/patches/libtiff-CVE-2013-4232.patch,
  gnu/packages/patches/libtiff-CVE-2013-4243.patch,
  gnu/packages/patches/libtiff-CVE-2013-4244.patch,
  gnu/packages/patches/libtiff-CVE-2014-8127-pt1.patch,
  gnu/packages/patches/libtiff-CVE-2014-8127-pt2.patch,
  gnu/packages/patches/libtiff-CVE-2014-8127-pt3.patch,
  gnu/packages/patches/libtiff-CVE-2014-8127-pt4.patch,
  gnu/packages/patches/libtiff-CVE-2014-8128-pt1.patch,
  gnu/packages/patches/libtiff-CVE-2014-8128-pt2.patch,
  gnu/packages/patches/libtiff-CVE-2014-8128-pt3.patch,
  gnu/packages/patches/libtiff-CVE-2014-8128-pt4.patch,
  gnu/packages/patches/libtiff-CVE-2014-8128-pt5.patch,
  gnu/packages/patches/libtiff-CVE-2014-8129.patch,
  gnu/packages/patches/libtiff-CVE-2014-9330.patch,
  gnu/packages/patches/libtiff-CVE-2014-9655.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff)[source]: Add patches.
 2015-06-16 01:02:01 -04:00
Mark H Weaver 7d02724b7b Merge branch 'master' into core-updates 2015-06-16 01:01:54 -04:00
Mark H Weaver fef3cfaaab gnu: qemu: Add fixes for CVE-2015-{4037,4103,4104,4105,4106}. 
* gnu/packages/patches/qemu-CVE-2015-4037.patch,
  gnu/packages/patches/qemu-CVE-2015-4103.patch,
  gnu/packages/patches/qemu-CVE-2015-4104.patch,
  gnu/packages/patches/qemu-CVE-2015-4105.patch,
  gnu/packages/patches/qemu-CVE-2015-4106-pt1.patch,
  gnu/packages/patches/qemu-CVE-2015-4106-pt2.patch,
  gnu/packages/patches/qemu-CVE-2015-4106-pt3.patch,
  gnu/packages/patches/qemu-CVE-2015-4106-pt4.patch,
  gnu/packages/patches/qemu-CVE-2015-4106-pt5.patch,
  gnu/packages/patches/qemu-CVE-2015-4106-pt6.patch,
  gnu/packages/patches/qemu-CVE-2015-4106-pt7.patch,
  gnu/packages/patches/qemu-CVE-2015-4106-pt8.patch: New files.
* gnu-system.am (dist_patch_DATA): Add them.
* gnu/packages/qemu.scm (qemu-headless)[source]: Add patches.
 2015-06-16 00:29:28 -04:00
Ludovic Courtès d3b4c1358c gnu: tar: Skip tests that rely on undefined unlinkat(2) behavior. 
Fixes <http://bugs.gnu.org/20597>.
Reported by Andrew Patterson <ajpatter@uwaterloo.ca>.

* gnu/packages/patches/tar-skip-unreliable-tests.patch: New file.
* gnu/packages/base.scm (tar)[source](patches): Add it.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-06-16 00:27:27 +02:00
Ludovic Courtès 25cc3fe703 gnu: gettext: Fix non-deterministic msgunfmt behavior. 
Suggested by Alírio Eyng <alirioeyng@gmail.com>.

* gnu/packages/patches/gettext-msgunfmt.patch: New file.
* gnu/packages/gettext.scm (gnu-gettext)[source]: Use it.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-06-15 23:34:01 +02:00
Mark H Weaver bcf2971f6e Merge branch 'master' into core-updates 
Conflicts:
	gnu/packages/commencement.scm
	gnu/packages/xml.scm
 2015-06-14 08:49:42 -04:00
Mark H Weaver 0ad8f76f7f gnu: perl-net-ssleay: Disable test that fails with openssl-1.0.2b. 
* gnu/packages/patches/perl-net-ssleay-disable-ede-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/openssl.scm (perl-net-ssleay): Add patch.
 2015-06-13 23:01:07 -04:00
Mark H Weaver 4c50e5ab3a gnu: python: Disable ssl test that fails with openssl-1.0.2b. 
* gnu/packages/patches/python-disable-ssl-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python): Add patch.
 2015-06-13 23:01:07 -04:00
Eric Bavier 0061079a19 gnu: Add hydra. 
* gnu/packages/ci.scm: New file.
* gnu/packages/patches/hydra-automake-1.15.patch,
  gnu/packages/patches/hydra-disable-darcs-test.patch: New files.
* gnu-system.am (GNU_SYSTEM_MODULES): Add file.
  (dist_patch_DATA): Add patches.
 2015-06-13 08:05:01 -05:00
Manolis Ragkousis 16cae799db gnu: patch: Set PATH_MAX for Hurd systems. 
* gnu/packages/patches/patch-hurd-path-max.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
 2015-06-12 15:46:25 +03:00
Mark H Weaver 1492801655 Merge branch 'master' into core-updates 2015-06-10 17:50:27 -04:00
Mark H Weaver 3dbb0e5f8b gnu: qemu: Add fix for CVE-2015-3209. 
* gnu/packages/patches/qemu-CVE-2015-3209.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/qemu.scm (qemu): Add patch.
 2015-06-10 15:42:16 -04:00