Commit Graph

48011 Commits

Author SHA1 Message Date
Efraim Flashner 230e59da1b
gnu: education.scm: Import (gnu packages curl).
This is a follow-up to 3f19b268ea.

* gnu/packages/education.scm.scm: Import (gnu packages curl) module.
2019-09-16 16:16:18 +03:00
Rutger Helling 489f540b4e
gnu: linux-libre: Update to 5.2.15.
* gnu/packages/linux.scm (linux-libre): Update to 5.2.15.
2019-09-16 14:07:37 +02:00
Rutger Helling 30ba3d8593
gnu: wireguard: Update to 0.0.20190913.
* gnu/packages/vpn.scm (wireguard): Update to 0.0.20190913.
2019-09-16 14:07:37 +02:00
Efraim Flashner d2c0a7a22f
gnu: Add ktouch.
* gnu/packages/education.scm (ktouch): New variable.
2019-09-16 15:04:30 +03:00
Efraim Flashner dece34332b
gnu: Add kqtquickcharts.
* gnu/packages/kde.scm (kqtquickcharts): New variable.
2019-09-16 15:04:26 +03:00
Efraim Flashner 3f19b268ea
gnu: Add klavaro.
* gnu/packages/education.scm (klavaro): New variable.
2019-09-16 15:01:03 +03:00
Efraim Flashner 74e7465c9b
Revert "build-system/r: Use %bioconductor-version."
This reverts commit 41ca406fa5.

This commit breaks 'guix pull', as reported by Hao Chen.
2019-09-16 14:34:15 +03:00
Ricardo Wurmus 518fd3b659
gnu: neovim: Update to 0.4.2.
* gnu/packages/vim.scm (neovim): Update to 0.4.2.
[arguments]: Remove "patch-tic" phase; add "lua-luv" to "set-lua-paths" phase.
[inputs]: Add lua5.1-luv.
2019-09-16 12:26:26 +02:00
Ricardo Wurmus 9ad3d67981
gnu: Add lua-luv.
* gnu/packages/lua.scm (lua-luv, lua5.1-luv, lua5.2-luv): New variables.
(make-lua-luv): New procedure.
2019-09-16 12:26:25 +02:00
Ricardo Wurmus 456da45c1b
gnu: libvterm: Update to 0.1.
* gnu/packages/terminals.scm (libvterm): Update to 0.1.
2019-09-16 12:26:25 +02:00
Ricardo Wurmus 41ca406fa5
build-system/r: Use %bioconductor-version.
* guix/build-system/r.scm (bioconductor-uri): Use %bioconductor-version
instead of hard-coding the version string.
2019-09-16 12:26:25 +02:00
Ricardo Wurmus 76c0b60821
import/cran: Export %bioconductor-version.
* guix/import/cran.scm (%bioconductor-version): Export it.
2019-09-16 12:26:25 +02:00
Martin Becze ad6e168b3f
gnu: evolution: Wrap with required path variables.
Fixes <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=36896>.

* gnu/packages/gnome.scm (evolution)[arguments]: Add a ‘wrap-program’
phase.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2019-09-16 12:17:48 +02:00
Pierre Neidhardt eb2e9ef4d9
gnu: Add cl-prevalence.
* gnu/packages/lisp.scm (cl-prevalence, sbcl-cl-prevalence, ecl-cl-prevalence): New variables.
2019-09-16 11:58:40 +02:00
Pierre Neidhardt 5216632a95
gnu: Add s-sysdeps.
* gnu/packages/lisp.scm (sbcl-s-sysdeps, cl-s-sysdeps, ecl-s-sysdeps): New variables.
2019-09-16 11:58:21 +02:00
Kyle Andrews 1d25447e8b
gnu: Add herbstluftwm.
* gnu/packages/wm.scm (herbstluftwm): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-09-16 10:57:58 +02:00
Brian Leung a1a4a40715
gnu: emacs-dumb-jump: Update to 0.5.3.
* gnu/packages/emacs-xyz.scm (emacs-dumb-jump): Update to 0.5.3.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-16 10:30:16 +02:00
Kyle Meyer 1ece099d5c
gnu: git-annex: Update to 7.20190912.
* gnu/packages/haskell-apps.scm (git-annex): Update 7.20190912.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-16 10:27:36 +02:00
Kyle Meyer f2a3ff8591
gnu: git-annex: Build with MagicMime support.
git-annex has a mechanism for configuring whether a file is added to the annex
or stored in git.  Building with MagicMime support makes it possible to
condition the behavior on a file's MIME type.

* gnu/packages/haskell-apps.scm (git-annex)[inputs]: Add ghc-magic.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-16 10:27:32 +02:00
Kyle Meyer e405912c20
gnu: Add ghc-magic.
* gnu/packages/haskell-xyz.scm (ghc-magic): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-16 10:27:27 +02:00
Kyle Meyer 7e772cb66d
gnu: git-annex: Update license.
* gnu/packages/haskell-apps.scm (git-annex)[license]: Update main license to
AGPLv3+ and include other licenses mentioned in the package's COPYRIGHT file.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-16 10:27:10 +02:00
Ludovic Courtès 0074844366
pack: Provide a meaningful "repository name" for Docker.
Previously, images produced by 'guix pack -f docker' would always show
up as "profile" in the output of 'docker images'.  With this change,
'docker images' shows a name constructed from the packages found in the
image--e.g., "bash-coreutils-grep-sed".

* guix/docker.scm (canonicalize-repository-name): New procedure.
(generate-tag): Remove.
(manifest): Add optional 'tag' parameter and honor it.
(repositories): Likewise.
(build-docker-image): Add #:repository parameter and pass it to
'manifest' and 'repositories'.
* guix/scripts/pack.scm (docker-image)[build]: Compute 'tag' and pass it
as #:repository to 'build-docker-image'.
2019-09-16 10:25:31 +02:00
Ludovic Courtès 9bbaf2ae72
pack: Add packages in the order in which they appear on the command line.
* guix/scripts/pack.scm (guix-pack)[manifest-from-args](packages):
Reverse order of packages taken from OPTS.
2019-09-16 10:25:16 +02:00
Carlo Zancanaro ec36339dfd
services: certbot: Add --manual-public-ip-logging-ok for manual challenges
* gnu/services/certbot.scm (certbot-command): Add
  --manual-public-ip-logging-ok flag to the certbot command when doing a
  manual challenge.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-09-16 10:22:35 +02:00
Rutger Helling fb6e550d6b
gnu: retroarch: Update to 1.7.8.4.
* gnu/packages/emulators.scm (retroarch): Update to 1.7.8.4.
2019-09-16 08:25:04 +02:00
Rutger Helling eca0f3d070
gnu: mgba: Update to 0.7.3.
* gnu/packages/emulators.scm (mgba): Update to 0.7.3.
2019-09-16 08:25:04 +02:00
Ricardo Wurmus d80a15696b
gnu: Add r-variancepartition.
* gnu/packages/bioconductor.scm (r-variancepartition): New variable.
2019-09-15 22:57:47 +02:00
Ricardo Wurmus 2a360cf6ac
gnu: Add r-wavetiling.
* gnu/packages/bioconductor.scm (r-wavetiling): New variable.
2019-09-15 22:54:21 +02:00
Ricardo Wurmus f5349b4d5a
gnu: Add r-genomegraphs.
* gnu/packages/bioconductor.scm (r-genomegraphs): New variable.
2019-09-15 22:51:52 +02:00
Ricardo Wurmus 4c63eeb8a4
gnu: Add r-oligo.
* gnu/packages/bioconductor.scm (r-oligo): New variable.
2019-09-15 22:50:31 +02:00
Ricardo Wurmus d6a5d9b24f
gnu: Add r-affxparser.
* gnu/packages/bioconductor.scm (r-affxparser): New variable.
2019-09-15 22:50:25 +02:00
Ricardo Wurmus df8576e5c9
gnu: Add r-variantfiltering.
* gnu/packages/bioconductor.scm (r-variantfiltering): New variable.
2019-09-15 22:41:03 +02:00
Ricardo Wurmus fc3719cc0f
gnu: Add r-shinythemes.
* gnu/packages/cran.scm (r-shinythemes): New variable.
2019-09-15 22:40:25 +02:00
Ricardo Wurmus 41b8b05c9e
gnu: Add r-shinytree.
* gnu/packages/cran.scm (r-shinytree): New variable.
2019-09-15 22:33:50 +02:00
Ricardo Wurmus 4112ff7e74
gnu: Add js-requirejs.
* gnu/packages/javascript.scm (js-requirejs): New variable.
2019-09-15 21:19:53 +02:00
Ricardo Wurmus bb0024dc69
gnu: Add r-reqon.
* gnu/packages/bioconductor.scm (r-reqon): New variable.
2019-09-15 21:07:57 +02:00
Ricardo Wurmus e5dfcd8e26
gnu: Add r-seqbias.
* gnu/packages/bioconductor.scm (r-seqbias): New variable.
2019-09-15 21:07:56 +02:00
Ricardo Wurmus 12105c6c3a
gnu: Add r-affycoretools.
* gnu/packages/bioconductor.scm (r-affycoretools): New variable.
2019-09-15 20:58:26 +02:00
Ricardo Wurmus 01c7ba9982
gnu: Add r-oligoclasses.
* gnu/packages/bioconductor.scm (r-oligoclasses): New variable.
2019-09-15 20:58:26 +02:00
Ricardo Wurmus 15184fb386
gnu: Add r-reportingtools.
* gnu/packages/bioconductor.scm (r-reportingtools): New variable.
2019-09-15 20:58:25 +02:00
Ricardo Wurmus 83b4209122
gnu: Add r-pfam-db.
* gnu/packages/bioconductor.scm (r-pfam-db): New variable.
2019-09-15 20:57:26 +02:00
Ricardo Wurmus 4ca2d6c1a6
gnu: Add r-affycontam.
* gnu/packages/bioconductor.scm (r-affycontam): New variable.
2019-09-15 20:53:27 +02:00
Ricardo Wurmus 5094aa9472
gnu: Add r-affycompatible.
* gnu/packages/bioconductor.scm (r-affycompatible): New variable.
2019-09-15 20:53:21 +02:00
Ricardo Wurmus 5cf940de21
gnu: Add r-affycomp.
* gnu/packages/bioconductor.scm (r-affycomp): New variable.
2019-09-15 20:53:14 +02:00
Ricardo Wurmus 53b1e10f23
gnu: Add r-affydata.
* gnu/packages/bioconductor.scm (r-affydata): New variable.
2019-09-15 20:53:01 +02:00
Ricardo Wurmus 853211a51b
gnu: Add r-timeseriesexperiment.
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): New variable.
2019-09-15 20:42:41 +02:00
Ricardo Wurmus 739b2d10f0
gnu: Add r-wavcluster.
* gnu/packages/bioconductor.scm (r-wavcluster): New variable.
2019-09-15 20:41:01 +02:00
Ricardo Wurmus d77e69e9e1
gnu: r-spam: Update to 2.3-0.
* gnu/packages/cran.scm (r-spam): Update to 2.3-0.
2019-09-15 16:15:37 +02:00
Ricardo Wurmus e48e476f41
gnu: r-feather: Update to 0.3.5.
* gnu/packages/cran.scm (r-feather): Update to 0.3.5.
2019-09-15 16:15:37 +02:00
Giacomo Leidi 21fc601295
gnu: emacs-zerodark-theme: Update to 4.6.
* gnu/packages/emacs-xyz.scm (emacs-zerodark-theme): Update to 4.6.
[source]: Update to new source uri.
2019-09-15 15:29:18 +03:00