Commit Graph

10539 Commits

Author SHA1 Message Date
Andy Patterson 932b2ea206
gnu: ecl: Use "kernel-headers" instead of "linux-headers" to designate input.
* gnu/packages/lisp.scm (ecl)[arguments]: Use "kernel-headers" as the
identifier for an input.

This is a follow-up to commit 55de892b43.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2016-07-31 20:13:16 +02:00
Andreas Enge 42bf34298e
gnu: rapicorn: Add patch to handle isnan.
* gnu/packages/patches/rapicorn-isnan.patch: New file.
* gnu/packages/graphics.scm (rapicorn)[source]: Add patch.
* gnu/local.mk (dist_patch_DATA): Register patch.
2016-07-31 18:16:25 +02:00
Andreas Enge acac969fa2
gnu: fastcap: Add input ghostscript.
* gnu/packages/engineering.scm (fastcap)[native-inputs]: Add ghostscript.

This is a follow-up to commit e83a13faa2.
2016-07-31 17:11:15 +02:00
Andreas Enge dceba1c19b
gnu: zsh: Update to 5.2.
* gnu/packages/zsh.scm (zsh): Update to 5.2.
2016-07-31 17:05:36 +02:00
Andreas Enge ce430bd637
gnu: tcc: Use "kernel-headers" instead of "linux-headers" to designate input.
* gnu/packages/c.scm (tcc)[arguments]: Use "kernel-headers" as identifier
for an input.

This is a follow-up to commit 55de892b43.
2016-07-31 16:50:12 +02:00
Andreas Enge 70a967209c
gnu: dealii: Unregister deleted patch.
* gnu/local.mk (dist_patch_DATA): Drop deleted patch.

This is a follow-up to commit 101e847294.
2016-07-31 16:37:39 +02:00
Andreas Enge 101e847294
gnu: dealii: Update to 8.4.1.
* gnu/packages/maths.scm (dealii): Update to 8.4.1.
* gnu/packages/patches/dealii-p4est-interface.patch: Remove file.
2016-07-31 15:22:41 +02:00
Andreas Enge 7b995c7bcb
gnu: wine: Update to 1.9.15.
* gnu/packages/wine.scm (wine): Update to 1.9.15.
2016-07-31 12:11:05 +02:00
Andreas Enge bb484529cc
gnu: python-alembic: Update to 0.8.7.
* gnu/packages/python.scm (python-alembic): Update to 0.8.7.
2016-07-31 11:18:53 +02:00
Andreas Enge 33906d54c1
gnu: perl-xml-libxml: Update to 2.0128.
* gnu/packages/xml.scm (perl-xml-libxml): Update to 2.0128.
2016-07-31 09:55:14 +02:00
宋文武 85860fdf82
gnu: glibc-locales: Fix build.
* gnu/packages/patches/glibc-locales.patch: Adjust to glibc-2.23.
* gnu/packages/base.scm (glibc-locales)[arguments]:
Pass 'lib_cv_complocaledir'.
2016-07-31 10:42:47 +08:00
Tomáš Čech 2fa66f451a
gnu: mutt: Update to 1.6.2.
* gnu/packages/mail.scm(mutt): Update to 1.6.2.
2016-07-30 22:37:56 +02:00
Kei Kebreau 4bc37bf0c3
gnu: Add python-pygame.
* gnu/packages/game-development.scm (python-pygame): New variable.
2016-07-30 14:32:49 -04:00
Kei Kebreau d8841cc52e
gnu: Add libsmpeg.
* gnu/packages/video.scm (libsmpeg): New variable.
2016-07-30 14:31:58 -04:00
Leo Famulari 6661db4e97
gnu: stellarium: Improve description.
Suggested by Danny Milosavljevic <dannym@scratchpost.org>.

* gnu/packages/education.scm (stellarium)[description]: Mention telescope
tracking.
2016-07-30 10:05:44 -04:00
Ludovic Courtès c2c54ebd91
gnu: Add glibc 2.22.
* gnu/packages/base.scm (glibc-2.22): New variable.
(glibc-2.21): Inherit from it; remove 'arguments' field.
2016-07-30 15:47:28 +02:00
Ludovic Courtès 716753cb97
tests: base: Correct invalid merge.
Fixes a regression introduced by merge commit
7575655212.

* gnu/tests/base.scm (run-basic-test)[test]: Fix list of 'use-modules'
and 'test-begin' call.
2016-07-30 15:47:28 +02:00
Ben Woodcroft c4382cd18f
gnu: diamond: Update to 0.8.17.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.17.
2016-07-30 23:02:57 +10:00
ng0 9b12bc7032
gnu: gnunet-gtk: Configure with gnunet path.
* gnun/packages/gnunet.scm (gnunet-gtk)[arguments]: Add '--with-gnunet'
to #:configure-flags.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-07-30 15:33:57 +08:00
Eric Bavier d25639731a
gnu: Add tuxpaint-config.
* gnu/packages/games.scm (tuxpaint-config): New variable.
2016-07-29 23:17:44 -05:00
Eric Bavier c3d850f232
gnu: Add tuxpaint-stamps.
* gnu/packages/games.scm (tuxpaint-stamps): New variable.
2016-07-29 21:50:15 -05:00
Eric Bavier 9b1ada4e81
gnu: Add Tux Paint.
* gnu/packages/games.scm (tuxpaint): New variable.
* gnu/packages/patches/tuxpaint-stamps-path.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-07-29 21:50:15 -05:00
Alex Griffin 23319ed674
gnu: beets: Update to 1.3.19.
* gnu/packages/music.scm (beets): Update to 1.3.19.
[source]: Remove patch to skip failing tests.
* gnu/packages/patches/beets-image-test-failure.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-29 19:19:49 -04:00
Leo Famulari d1c9d3bb42
gnu: python-protobuf: Update to 3.0.0.
* gnu/packages/protobuf.scm (python-protobuf, python2-protobuf):
Update to 3.0.0.
2016-07-29 19:04:31 -04:00
Leo Famulari 48b7e4a6c1
gnu: btrfs-progs: Update to 4.6.1
* gnu/packages/linux.scm (btrfs-progs): Update to 4.6.1.
[native-inputs]: Add WHICH.
2016-07-29 18:58:48 -04:00
Mark H Weaver 359aba76b6
Merge branch 'master' into core-updates 2016-07-29 18:29:58 -04:00
Mark H Weaver 9bdf56dc13
gnu: gd: Add fix for gd2_read test.
* gnu/packages/patches/gd-fix-gd2-read-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gd.scm (gd)[source]: Add patch.
2016-07-29 18:28:40 -04:00
Leo Famulari de30a6e0f0
gnu: protobuf: Update to 2.6.1.
* gnu/packages/protobuf.scm (protobuf): Update to 2.6.1.
[source]: Update to new upstream URL.
2016-07-29 16:41:06 -04:00
Mark H Weaver 31c995f8af
Revert "gnu: gd: Add fix for gd2_read test."
This reverts commit ce290354ec.
2016-07-29 16:17:35 -04:00
Mark H Weaver ce290354ec
gnu: gd: Add fix for gd2_read test.
* gnu/packages/patches/gd-fix-gd2-read-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gd.scm (gd)[source]: Add patch.
2016-07-29 16:06:43 -04:00
Leo Famulari 814572aff5
gnu: wireshark: Update to 2.0.5.
* gnu/packages/networking.scm (wireshark): Update to 2.0.5.
2016-07-29 15:08:55 -04:00
Leo Famulari d260015062
gnu: perl-dbd-mysql: Update to 4.035 [fixes CVE-2015-8949].
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.035.
2016-07-29 14:49:30 -04:00
Mark H Weaver 0bab3af078
Merge branch 'master' into core-updates 2016-07-29 14:18:07 -04:00
Mark H Weaver 682a7d2338
gnu: linux-libre@4.4: Update to 4.4.16.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.16.
2016-07-29 14:14:25 -04:00
Mark H Weaver a81445737d
gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207].
* gnu/packages/patches/gd-CVE-2016-5766.patch,
gnu/packages/patches/gd-CVE-2016-6128.patch,
gnu/packages/patches/gd-CVE-2016-6132.patch,
gnu/packages/patches/gd-CVE-2016-6214.patch,
gnu/packages/patches/gd-fix-test-on-i686.patch: Delete files.
* gnu/packages/patches/gd-fix-tests-on-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/gd.scm (gd): Update to 2.2.3.
[source]: Update patches field accordingly.
2016-07-29 13:56:39 -04:00
Leo Famulari f54510d29b
gnu: virt-viewer: Remove SPICE-PROTOCOL from inputs.
This is a followup to ba9e2ee64a.

* gnu/packages/spice.scm (virt-viewer)[inputs]: Remove SPICE-PROTOCOL.
2016-07-29 12:50:29 -04:00
Leo Famulari 3c4a8f03a2
gnu: spice-gtk: Remove LIBUSB from inputs.
This is a followup to 0d05a739d2.

* gnu/packages/spice.scm (spice-gtk)[inputs]: Remove LIBUSB.
2016-07-29 12:50:29 -04:00
David Craven efcada41e7
gnu: Order module imports in (gnu packages qemu) alphabetically.
* gnu/packages/qemu.scm: Order module imports alphabetically.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:43:55 +02:00
David Craven 6799ed7614
gnu: Add xf86-video-qxl.
* gnu/packages/xorg.scm (xf86-video-qxl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:41:30 +02:00
David Craven c38fb02e9b
gnu: Add libinput-minimal.
* gnu/packages/freedesktop.scm (libinput-minimal): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:40:24 +02:00
David Craven 66e076642c
gnu: Remove trailing periods from synopsis.
* gnu/packages/emacs.scm (emacs-smart-mode-line): Update synopsis.
* gnu/packages/gnustep.scm (wmfire): Update synopsis.
* gnu/packages/haskell.scm (ghc-socks): Update synopsis.
* gnu/packages/kde-frameworks.scm (oxygen-icons): Update synopsis.
* gnu/packages/openstack.scm (python-bandit): Update synopsis.
* gnu/packages/perl.scm (perl-test-trap): Update synopsis.
* gnu/packages/python.scm (python-backports-abc): Update synopsis.
* gnu/packages/ruby.scm (python-cryptography-vectors): Update synopsis.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:37:22 +02:00
David Craven 0160458bf8
gnu: Use define-public to export packages.
* gnu/packages/bison.scm (bison): Define public.
* gnu/packages/flex.scm (flex): Define public.
* gnu/packages/pulseaudio.scm (libsndfile, libsamplerate, pulseaudio): Define
public.
* gnu/packages/sdl.scm (sdl, sdl2, libmikmod, sdl-gfx, sdl-image, sdl-mixer,
sdl-net, sdl-ttf): Define public.
* gnu/packages/search.scm (xapian): Remove unnecessary #:export.
* gnu/packages/swig.scm (swig): Define public.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:35:20 +02:00
Ludovic Courtès 35e4b3d546
gnu: iptables: Mention "firewall".
Suggested by ng0 <ng0@we.make.ritual.n0.is>.

* gnu/packages/linux.scm (iptables)[description]: Mention "firewall".
2016-07-29 17:32:03 +02:00
Eric Le Bihan 7c6bdeec23
gnu: Add s6-networking.
* gnu/packages/skarnet.scm (s6-networking): New variable.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:29:50 +02:00
Eric Le Bihan 798b776deb
gnu: Add s6-dns.
* gnu/packages/skarnet.scm (s6-dns): New variable.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:29:50 +02:00
Eric Le Bihan 918cee467d
gnu: Add s6.
* gnu/packages/skarnet.scm (s6): New variable.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:29:50 +02:00
Eric Le Bihan 2f016ac150
gnu: execline: Update to 2.1.5.0.
* gnu/packages/skarnet.scm (execline): Update to 2.1.5.0.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:29:50 +02:00
Eric Le Bihan 892aa89477
gnu: skalibs: Update to 2.3.10.0.
* gnu/packages/skarnet.scm (skalibs): Update to 2.3.10.0.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:29:50 +02:00
Danny Milosavljevic 2614de3c5a
gnu: Add stellarium.
* gnu/local.mk: Include gnu/packages/education.scm .
* gnu/packages/education.scm: Add new file.
* gnu/packages/education.scm (stellarium): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:29:50 +02:00
Leo Famulari ba9e2ee64a
gnu: spice-gtk: Propagate SPICE-PROTOCOL.
* gnu/packages/spice.scm (spice-gtk)[inputs]: Move SPICE-PROTOCOL to...
[propagated-inputs]: ... here.
2016-07-29 11:16:23 -04:00
Leo Famulari 0d05a739d2
gnu: usbredir: Propagate LIBUSB.
* gnu/packages/spice.scm (usbredir)[inputs]: Replace field with ...
[propagated-inputs]: ... new field.
2016-07-29 11:16:23 -04:00
Ludovic Courtès 6e6ddebf48
gnu: guix: Add dependency on zlib.
* gnu/packages/package-management.scm (guix-0.10.0)[inputs]: Add ZLIB.
2016-07-29 11:39:30 +02:00
Alex Griffin 61201e46a7
gnu: password-store: Wrap PATH.
* gnu/packages/password-utils.scm (password-store)
[arguments]: Wrap PATH more thoroughly.
[native-inputs]: Move getopt to inputs.
[inputs]: Add sed.

Signed-off-by: Mathieu Lirzin <mthl@gnu.org>
2016-07-29 11:00:31 +02:00
Ludovic Courtès f33e71fca2
gnu: perl-dbd-pg: Add description.
* gnu/packages/databases.scm (perl-dbd-pg)[description]: Add non-empty
description.
2016-07-29 10:22:31 +02:00
Ludovic Courtès a3947cb1b8
gnu: Sync GNU descriptions with upstream.
From 'guix lint -c gnu-description'.

* gnu/packages/gnunet.scm (gnunet): Adjust description.
* gnu/packages/marst.scm (marst): Likewise.
* gnu/packages/maths.scm (c-graph): Likewise.
* gnu/packages/networking.scm (macchanger): Likewise.
2016-07-29 10:13:12 +02:00
Nicolas Goaziou c777570b57
gnu: Add sshpass.
* gnu/packages/ssh.scm (sshpass): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 00:04:39 +02:00
Leo Famulari cfbb3b0d00
gnu: python-beautifulsoup4: Update to 4.5.0.
* gnu/packages/python.scm (python-beautifulsoup4, python2-beautifulsoup4):
Update to 4.5.0.
2016-07-28 17:50:52 -04:00
ng0 adca268e97
gnu: perl-devel-symdump: Update to 2.17.
* gnu/packages/perl.scm (perl-devel-symdump): Update to 2.17.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:41:06 -04:00
David Craven 6144dff516
gnu: Add virt-viewer.
* gnu/packages/spice.scm (virt-viewer): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:42 -04:00
David Craven 33b0f4a4b2
gnu: Add spice-vdagent.
* gnu/packages/spice.scm (spice-vdagent): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:42 -04:00
David Craven 3cbd37e440
gnu: Add spice.
* gnu/packages/spice.scm (spice): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:42 -04:00
David Craven bb28cf90e9
gnu: Add spice-gtk.
* gnu/packages/spice.scm (spice-gtk): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:42 -04:00
David Craven 289e472f56
gnu: Add spice-protocol.
* gnu/packages/spice.scm (spice-protocol): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:41 -04:00
David Craven 2ef2654de4
gnu: Add virglrenderer.
* gnu/packages/spice.scm (virglrenderer): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:41 -04:00
David Craven 1d2c67c11e
gnu: Add usbredir.
* gnu/packages/spice.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:41 -04:00
Leo Famulari 49d725a108
Merge branch 'master' into core-updates 2016-07-28 16:46:27 -04:00
Leo Famulari a1dfa02233
Revert "gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207]."
This reverts commit ae46cd0e4c.
2016-07-28 16:45:02 -04:00
Mark H Weaver 622c22ccb4
Merge branch 'master' into core-updates 2016-07-28 14:13:26 -04:00
Mark H Weaver ae46cd0e4c
gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207].
* gnu/packages/patches/gd-CVE-2016-5766.patch,
gnu/packages/patches/gd-CVE-2016-6128.patch,
gnu/packages/patches/gd-CVE-2016-6132.patch,
gnu/packages/patches/gd-CVE-2016-6214.patch,
gnu/packages/patches/gd-fix-test-on-i686.patch: Delete files.
* gnu/packages/patches/gd-fix-tests-on-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/gd.scm (gd): Update to 2.2.3.
[source]: Update patches field accordingly.
2016-07-28 14:06:12 -04:00
Ludovic Courtès 386b71d1b9
gnu: commencement: 'guile-final' is now "hidden".
This way, we no longer have this annoying warning:

  $ guix build guile -n
  guix build: warning: ambiguous package specification `guile'
  guix build: warning: choosing guile-2.0.11 from gnu/packages/guile.scm:128:2

* gnu/packages/commencement.scm (guile-final): Use 'hidden-package'.
* tests/packages.scm ("fold-packages, hidden package"): New test.
2016-07-28 18:53:13 +02:00
Ludovic Courtès 6980511b73
packages: Add 'hidden-package'.
* guix/packages.scm (hidden-package, hidden-package?): New procedures.
* gnu/packages.scm (fold-packages): Filter out 'hidden-package?'.
* tests/packages.scm ("hidden-package"): New test.
2016-07-28 18:50:43 +02:00
Alex Griffin cb55f9c652
gnu: Add asciinema.
* gnu/packages/terminals.scm (asciinema): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-28 15:43:40 +02:00
Alex Griffin 71d9b98078
gnu: gnome: Propagate file-roller.
* gnu/packages/gnome.scm (gnome)[propagated-inputs]: Add file-roller.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-28 15:42:30 +02:00
Ludovic Courtès 212163f8d5
gnu: dico: Patch 'idxgcide' bug.
* gnu/packages/patches/dico-idxgcide-bug.patch: New file.
* gnu/packages/dico.scm (dico)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-07-28 14:18:59 +02:00
Ludovic Courtès c6b3dc69bd
gnu: vlc: Drop -ffast-math from the compilation flags.
* gnu/packages/video.scm (vlc)[arguments]: Add "ac_cv_c_fast_math=no" to
  #:configure-flags.
2016-07-28 13:56:05 +02:00
Ben Woodcroft 6547708f71
gnu: r-genomicfeatures: Update to 1.24.5.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.24.5.
2016-07-28 21:54:44 +10:00
Ben Woodcroft 2c9f6251fc
gnu: r-bsgenome: Update to 1.40.1.
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.40.1.
2016-07-28 21:45:17 +10:00
Ben Woodcroft b0f0778a7c
gnu: r-iranges: Update to 2.6.1.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.6.1.
2016-07-28 21:45:17 +10:00
Ben Woodcroft f403941f81
gnu: r-limma: Update to 3.28.17.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.28.17.
2016-07-28 21:45:16 +10:00
Ben Woodcroft 2b2ff0bd91
gnu: r-xvector: Update to 0.12.1.
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.12.1.
2016-07-28 21:45:16 +10:00
Ben Woodcroft a463055862
gnu: r-genomicranges: Update to 1.24.2.
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.24.2.
2016-07-28 21:45:16 +10:00
Ben Woodcroft bab15ccec4
gnu: r-annotationdbi: Update to 1.34.4.
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.34.4.
2016-07-28 21:45:15 +10:00
Ben Woodcroft a22999f245
gnu: r-biocparallel: Update to 1.6.3.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.6.3.
2016-07-28 21:45:15 +10:00
Ben Woodcroft d104fc607d
gnu: r-biostrings: Update to 2.40.2.
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.40.2.
2016-07-28 21:45:15 +10:00
Ben Woodcroft 1864e051c9
gnu: r-summarizedexperiment: Update to 1.2.3.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.2.3.
2016-07-28 21:45:15 +10:00
Ben Woodcroft 29b0cc8ad5
gnu: r-genomicalignments: Update to 1.8.4.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.8.4.
2016-07-28 21:45:14 +10:00
Ben Woodcroft 5131e21064
gnu: r-rtracklayer: Update to 1.32.2.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.32.2.
2016-07-28 21:45:14 +10:00
Ben Woodcroft 2a3e325f5e
gnu: r-genomeinfodb: Update to 1.8.3.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.8.3.
2016-07-28 21:45:14 +10:00
Ben Woodcroft ae32c58e28
gnu: r-bsgenome: Update to 1.40.1.
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.40.1.
2016-07-28 21:35:40 +10:00
Ben Woodcroft e426cd7421
gnu: r-iranges: Update to 2.6.1.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.6.1.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 1c4ad6076c
gnu: r-limma: Update to 3.28.17.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.28.17.
2016-07-28 21:35:40 +10:00
Ben Woodcroft bd0cc37834
gnu: r-xvector: Update to 0.12.1.
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.12.1.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 362f39d667
gnu: r-genomicranges: Update to 1.24.2.
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.24.2.
2016-07-28 21:35:40 +10:00
Ben Woodcroft ae60f3801a
gnu: r-annotationdbi: Update to 1.34.4.
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.34.4.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 7a0594fb5d
gnu: r-biocparallel: Update to 1.6.3.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.6.3.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 658f36e569
gnu: r-biostrings: Update to 2.40.2.
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.40.2.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 0d159d84e2
gnu: r-summarizedexperiment: Update to 1.2.3.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.2.3.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 722b4c919d
gnu: r-genomicalignments: Update to 1.8.4.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.8.4.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 380d3f8657
gnu: r-rtracklayer: Update to 1.32.2.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.32.2.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 303163c7b9
gnu: r-genomeinfodb: Update to 1.8.3.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.8.3.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 2d88825183
gnu: r-genomicfeatures: Update to 1.24.5.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.24.5.
2016-07-28 21:35:40 +10:00
Ben Woodcroft d6dfc39f68
gnu: r-s4vectors: Update to 0.10.2.
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.10.2.
2016-07-28 12:31:22 +02:00
Ben Woodcroft f2e791750b
gnu: r-s4vectors: Update to 0.10.2.
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.10.2.
2016-07-28 20:13:42 +10:00
Andreas Enge 4320c1c39f
gnu: asymptote: Add native input gs.
* gnu/packages/plotutils.scm (asymptote)[native-inputs]: Add gs.

This is a follow-up to commit d8eb912132.
2016-07-28 11:34:57 +02:00
Andreas Enge e309c75610
Merge remote-tracking branch 'origin/master' into core-updates 2016-07-28 11:08:55 +02:00
Leo Famulari e335b82c4e
gnu: mysql: Update to 5.7.13 [fixes CVE-2016-{3477,3521,3615,5440}].
* gnu/packages/patches/mysql-fix-failing-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/databases.scm (mysql): Update to 5.7.13.
2016-07-28 02:08:49 -04:00
Tomáš Čech 46e4e84ffc
gnu: the-silver-searcher: Update to 0.32.0.
* gnu/packages/code.scm(the-silver-searcher): Update to 0.32.0.
2016-07-28 08:05:04 +02:00
Leo Famulari 8e5d8b1880
gnu: imagemagick: Update to 6.9.5-3.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.5-3.
2016-07-27 23:25:13 -04:00
Leo Famulari ff7172feae
gnu: mariadb: Update to 10.1.16.
* gnu/packages/databases.scm (mariadb): Update to 10.1.16.
2016-07-27 23:25:08 -04:00
Ludovic Courtès 1bb163b0dd
gnu: python@2.7: Delete faulty test on mips64el only.
This amends 8b732bf6d9 and avoids a
rebuild.

* gnu/packages/python.scm (python-2.7)[arguments] <pre-check>:
When (%current-system) starts with "mips64el", delete
Lib/test/test_ctypes.py.
2016-07-28 00:58:40 +02:00
Alex Griffin b111bdb667
gnu: calibre: Update to 2.63.0.
* gnu/packages/ebook.scm (calibre): Update to 2.63.0.
[inputs]: Remove unnecessary imagemagick dependency.
[phases]: Use modify-phases.

* gnu/packages/patches/calibre-drop-unrar.patch: Update
for new version.

Signed-off-by: Roel Janssen <roel@gnu.org>
2016-07-27 23:45:16 +02:00
Carlos Sánchez de La Lama cad7e6abaf
system: Source /etc/environment before $HOME/.guix-profile/etc/profile.
* gnu/system.scm (operating-system-etc-service) <profile>: Move sourcing
of /etc/environment before that of $HOME/.guix-profile/etc/profile.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-27 23:08:20 +02:00
Andreas Enge 8b732bf6d9
gnu: python-2.7: Disable test failing on mips64el-linux.
* gnu/packages/python.scm (python-2.7)[source]: In a snippet, remove
an additional test that fails on mips64el-linux.
2016-07-27 18:24:12 +02:00
Ben Woodcroft 9712ef8d42
gnu: krona-tools: Update to 2.7.
* gnu/packages/web.scm (krona-tools): Update to 2.7.
[arguments]: Delete 'build' phase.  Install new scripts.
2016-07-27 23:39:56 +10:00
Ben Woodcroft 12c8f210ee
gnu: diamond: Update to 0.8.16.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.16.
2016-07-27 23:17:57 +10:00
Andreas Enge fd6830b3a6
gnu: guix: Update revision number in version.
This is a follow-up to commit 95af24a2f1.
Reported by Alex Kost <alezost@gmail.com>.
2016-07-27 15:16:17 +02:00
Andreas Enge 0072b3d3f2
gnu: skribilo: Add input ghostscript-gs.
* gnu/packages/engineering.scm (lout)[native-inputs]: Add ghostscript-gs.

This is a follow-up to commit d8eb912132.
2016-07-27 14:47:15 +02:00
Alex Griffin 46bd451520
gnu: magit: Fix rebase commands that require perl.
* gnu/packages/emacs.scm (magit)[inputs]: Add 'perl'.
[arguments]: Adjust 'patch-exec-paths' phase to make some rebase
commands find 'perl'.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-07-27 11:15:45 +03:00
Tobias Geerinckx-Rice 82ee141bab
gnu: Add httping.
* gnu/packages/networking.scm (httping): New variable.
2016-07-27 03:59:47 +02:00
Tobias Geerinckx-Rice 42ff54d5fa
gnu: Add missing copyright symbol.
* gnu/packages/networking.scm: Add missing "©" to header comments.
2016-07-27 03:59:47 +02:00
ng0 ae83dcf6ba
gnu: gmime: Remove 'gpg' to 'gpg2' substitution.
* gnu/packages/mail.scm (gmime)[arguments]: Remove the substitution which
previously changed 'gpg' to 'gpg2' in 'patch-paths-in-tests' phase.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-26 19:43:54 -04:00
Andreas Enge 5425269bf7
gnu: lout: Add input ghostscript.
* gnu/packages/lout.scm (lout)[native-inputs]: Add ghostscript, needed for ps2pdf.
2016-07-26 23:28:55 +02:00
Andreas Enge 02b934e2c6
gnu: lout: Make ghostscript-gs a native input.
* gnu/packages/lout.scm (lout)[inputs]: Move to native-inputs.
2016-07-26 23:09:01 +02:00
Andreas Enge 5ef469ce31
gnu: lout: Build with ghostscript-gs.
* gnu/packages/engineering.scm (lout)[inputs]: Replace GHOSTSCRIPT by
GHOSTSCRIPT-GS.

This is a follow-up to commit d8eb912132.
2016-07-26 23:08:00 +02:00
Andreas Enge d3896fc4ce
gnu: dmd: Remove package, superseded by shepherd.
* gnu/packages/admin.scm (dmd): Remove variable.
2016-07-26 22:50:26 +02:00
Danny Milosavljevic 90c2ee889b
gnu: Add perl-db-file.
* gnu/packages/databases.scm (perl-db_file): New variable.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2016-07-26 22:43:48 +02:00
Alex Griffin 88a8ce87a4
gnu: icecat: Install icons.
* gnu/packages/gnuzilla.scm (icecat)[arguments]: Add
'install-icons' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-26 14:53:16 +02:00
Tobias Geerinckx-Rice 2b76f13507
gnu: Add haveged.
* gnu/packages/linux.scm (haveged): New variable.
2016-07-26 11:20:52 +02:00
Tobias Geerinckx-Rice af7aaaebab
gnu: Add perceptualdiff.
* gnu/packages/image.scm (perceptualdiff): New variable.
2016-07-26 11:20:27 +02:00
Mark H Weaver ca80985c6c
gnu: linux-libre@4.1: Update to 4.1.28.
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.28.
2016-07-26 01:36:12 -04:00
Mark H Weaver de348a0bb7
gnu: linux-libre: Update to 4.7.
* gnu/packages/linux.scm (linux-libre): Update to 4.7.
* gnu/packages/linux-libre-4.7-x86_64.conf,
gnu/packages/linux-libre-4.7-i686.conf: New files.
* gnu/packages/linux-libre-4.6-x86_64.conf,
gnu/packages/linux-libre-4.6-i686.conf: Delete files.
* Makefile.am (KCONFIGS): Update accordingly.
2016-07-26 00:46:40 -04:00
Ludovic Courtès 5dbfbef729
gnu: lpsolve: Fix compilation issue.
Reported by Andreas Enge <andreas@enge.fr>
at <https://lists.gnu.org/archive/html/guix-devel/2016-07/msg01018.html>.

* gnu/packages/maths.scm (lpsolve)[source]: Augment 'snippet'.
2016-07-26 00:43:52 +02:00
Ludovic Courtès 6689d09457
gnu: lpsolve: Fail as early as possible.
* gnu/packages/maths.scm (lpsolve)[arguments]: In 'build' phase, check
the return value of 'system*' and honor it.
2016-07-26 00:43:52 +02:00
Andreas Enge 0e5f606159
gnu: calibre: Build with non-modular Qt.
* gnu/packages/ebook.scm (calibre)[native-inputs]: Replace QTBASE by QT.
[inputs]: Replace QTBASE by QT and PYTHON2-PYQT by PYTHON2-PYQT-5.5.

This essentially reverts commit 76806c54ed.

Reported by Roel Janssen <roel@gnu.org>.
2016-07-26 00:38:39 +02:00
Andreas Enge 4a8c35e143
gnu: pyqt: Add versions based on non-modular Qt 5.5.
* gnu/packages/qt.scm (python-pyqt-5.5, python2-pyqt-5.5): New variables.
2016-07-26 00:38:20 +02:00
Andreas Enge e83a13faa2
gnu: fastcap: Build with ghostscript-gs.
* gnu/packages/engineering.scm (fastcap)[native-inputs]: Replace GHOSTSCRIPT
by GHOST_SCRIPT-GS.

This is a follow-up to commit d8eb912132.
2016-07-25 23:59:47 +02:00
Andreas Enge 95af24a2f1
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 97c8aef.
2016-07-25 22:53:27 +02:00
Andreas Enge 97c8aef15d
system: Add mapped devices for RAID.
* gnu/system/mapped-devices.scm (raid-device-mapping, open-raid-device,
close-raid-device): New variables.
* doc/guix.texi (Mapped Devices): Add documentation for RAID devices,
reorganize documentation for LUKS devices.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-07-25 22:22:21 +02:00
Andreas Enge 14656f4495
Merge remote-tracking branch 'origin/master' into core-updates 2016-07-25 21:58:36 +02:00
Alex Kost 090bdb9e91
gnu: emacs-solarized-theme: Remove unneeded dependencies.
* gnu/packages/emacs.scm (emacs-solarized-theme)[propagated-inputs]:
Remove 'emacs-f' and 'emacs-s'.
2016-07-25 17:18:53 +03:00
Alex Kost c48899eba2
gnu: emacs: Install site-start.el in non-versioned directory.
Reported by Ricardo Wurmus on #guix.

* gnu/packages/emacs.scm (emacs)[arguments]: Put "site-start.el" in
"/share/emacs/site-lisp" instead of "/share/emacs/<version>/site-lisp"
to let inherited package with another version find it.
2016-07-25 17:18:53 +03:00
Alex Kost 07f7cc03ce
gnu: Add guile-daemon.
* gnu/packages/guile.scm (guile-daemon): New variable.
2016-07-25 17:18:53 +03:00
Alex Kost bd9af61035
gnu: Add guile-xosd.
* gnu/packages/guile.scm (guile-xosd): New variable.
2016-07-25 17:18:53 +03:00
Alex Kost 6cfd1a687a
gnu: Add xdpyprobe.
* gnu/packages/xdisorg.scm (xdpyprobe): New variable.
2016-07-25 17:18:53 +03:00
Alex Kost 84b5d9075c
gnu: mkfontdir: Do not propagate 'mkfontscale'.
* gnu/packages/xorg.scm (mkfontdir)[propagated-inputs]: Move
'mkfontscale' to ...
[inputs]: ... here.
[arguments]: Add 'wrap-mkfontdir' phase.
2016-07-25 17:18:52 +03:00
Alex Kost e48e31bcc8
gnu: Add xfd.
* gnu/packages/xorg.scm (xfd): New variable.
2016-07-25 17:18:52 +03:00
Alex Kost f225ae7544
gnu: Add xfontsel.
* gnu/packages/xorg.scm (xfontsel): New variable.
2016-07-25 17:18:52 +03:00
Andy Patterson 1925a87926
gnu: sbcl: Update to 1.3.7.
* gnu/packages/lisp.scm (sbcl): Update to 1.3.7.
[arguments]: During the patch-unix-tool-paths phase, avoid running
substitute* on a utf-16-be encoded file.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-07-25 19:50:13 +08:00
Ludovic Courtès d8eb912132
gnu: Use 'ghostscript-gs' in packages that need the 'gs' command.
Fixes a regression introduced in
eb354bdacb.

Reported by Andreas Enge <andreas@enge.fr>.

* gnu/packages/gv.scm (gv)[propagated-inputs]: Change from GHOSTSCRIPT/X
to GHOSTSCRIPT-GS/X.
* gnu/packages/music.scm (lilypond): Use GHOSTSCRIPT-GS instead of
GHOSTSCRIPT.
* gnu/packages/ocaml.scm (unison): Likewise.
* gnu/packages/plotutils.scm (asymptote): Likewise.
* gnu/packages/scheme.scm (chez-scheme): Likewise.
2016-07-25 11:37:43 +02:00
Ludovic Courtès 71eba3ebc1
gnu: Add 'ghostscript-gs' and 'ghostscript-gs-with-x'.
* gnu/packages/ghostscript.scm (ghostscript-wrapper): New procedure.
(ghostscript-gs, ghostscript-gs/x): New variables.
2016-07-25 11:36:51 +02:00
Andy Patterson 54a43ff406
gnu: ecl: Wrap with PATH, CPATH, LIBRARY_PATH, and LD_LIBRARY_PATH.
* gnu/packages/lisp.scm (ecl)[arguments]: Add 'wrap' phase.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-07-25 10:48:49 +02:00
Andy Patterson 60474cd114
gnu: ecl: Enable tests.
* gnu/packages/lisp.scm (ecl): Enable tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-25 10:48:49 +02:00
Andy Patterson e0524511ec
gnu: ecl: Update to 16.1.2.
* gnu/packages/lisp.scm (ecl): Update to 16.1.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-25 10:48:49 +02:00
Efraim Flashner 45477c6a7d
gnu: gnupg@2.1: Use 'modify-phases'.
* gnu/packages/gnupg.scm (gnupg@2.1)[arguments]: Use 'modify-phases'
syntax.
2016-07-25 00:18:15 +03:00
Efraim Flashner 35d28c6013
gnu: hdup: Update source url.
* gnu/packages/backup.scm (hdup)[source]: Update url.
2016-07-25 00:15:30 +03:00
Leo Famulari 163708a664
gnu: gnupg-2.1: Install executable as 'gpg'.
* gnu/packages/gnupg.scm (gnupg-2.1)[arguments]: Add '--enable-gpg2-is-gpg'
to #:configure-flags.
2016-07-24 17:09:40 -04:00
Ludovic Courtès bc85b127df
gnu: gnupg@2.0: Add the 'gpg' and 'gpgv' commands.
* gnu/packages/gnupg.scm (gnupg-2.0)[arguments]: Add
'rename-v2-commands' phase.
2016-07-24 22:18:45 +02:00
Efraim Flashner 80c47cf8e4
gnu: gnupg@2.0: Fix typo.
* gnu/packages/gnupg.scm (gnupg@2.0)[arguments]: Fix typo that prevented
gnupg from building.

This is a follow up to 6b547d2295.
2016-07-24 22:02:46 +03:00
Efraim Flashner 04c828c4fb
gnu: exiv2: Update source url.
* gnu/packages/geeqie.scm (exiv2)[source]: Update url.
2016-07-24 21:17:04 +03:00
Ludovic Courtès 6b547d2295
doc: gnupg@2.0: Use 'modify-phases'.
* gnu/packages/gnupg.scm (gnupg-2.0)[arguments]: Use 'modify-phases'.
2016-07-24 19:54:15 +02:00
Andreas Enge 1abdc167d3
Merge branch 'master' into core-updates 2016-07-24 18:42:56 +02:00
Andreas Enge a308c2339a
gnu: icecat: Disable parallel build.
* gnu/packages/gnuzilla.scm (icecat)[arguments]: Disable parallel build.
2016-07-24 18:40:46 +02:00
Andreas Enge 238e5642d4
gnu: icecat: Update to 38.8.0-gnu2.
* gnu/packages/gnuzilla.scm (icecat): Update to 38.8.0-gnu2.
2016-07-24 17:28:36 +02:00
Efraim Flashner d841a292b2
gnu: openssh: Fix CVE-2016-6210.
* gnu/packages/ssh.scm (openssh)[source]: Add patches
openssh-CVE-2016-6210-1.patch, openssh-CVE-2016-6210-2.patch,
openssh-CVE-2016-6210-3.patch.
* gnu/packages/patches/openssh-CVE-2016-6210-1.patch: New file.
* gnu/packages/patches/openssh-CVE-2016-6210-2.patch: New file.
* gnu/packages/patches/openssh-CVE-2016-6210-3.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register them.
2016-07-24 16:18:41 +03:00
Efraim Flashner df2c7563ff
gnu: pspp: Update to 0.10.2.
* gnu/packages/statistics.scm (pspp): Update to 0.10.2.
2016-07-24 15:43:35 +03:00
Efraim Flashner fe84bc9aba
gnu: python-iso8601: Update to 0.1.11.
* gnu/packages/python.scm (python-iso8601): Update to 0.1.11.
2016-07-24 15:43:34 +03:00
Efraim Flashner 2af56bfa1e
gnu: iniparser: Use 'modify-phases'.
* gnu/packages/samba.scm (iniparser)[arguments]: Use 'modify-phases'
syntax.
2016-07-24 15:43:34 +03:00
Efraim Flashner def8f501e6
gnu: iniparser: Update to 4.0.
* gnu/packages/samba.scm (iniparser): Update to 4.0.
[source]: Download from Github.
[arguments]: Define 'gcc' in Makefiles.
2016-07-24 15:43:33 +03:00
Efraim Flashner f0e8d85e17
gnu: python-waf: Update to 1.9.1.
* gnu/packages/python.scm (python-waf): Update to 1.9.1.
2016-07-24 15:43:33 +03:00
Efraim Flashner f0b8d83a77
gnu: mpv: Use packaged waf.
* gnu/packages/video.scm (mpv)[inputs]: Remove externally downloaded waf
package and use packaged python-waf.
2016-07-24 15:43:32 +03:00
Andreas Enge 8ebdf9afd6
gnu: wxwidgets: Update source URL.
* gnu/packages/wxwidgets.scm (wxwidgets, wxwidgets-2): Update source URL.
2016-07-24 10:36:54 +02:00
Leo Famulari d5f335eedb
gnu: git: Update to 2.9.2.
* gnu/packages/version-control.scm (git): Update to 2.9.2.
(git-manpages)[source]: Update hash.
2016-07-24 03:49:10 -04:00
Ricardo Wurmus 6af691723e
gnu: icedtea-6: Narrow file to certificate block.
* gnu/packages/java.scm (icedtea-6)[arguments]: Extract certificate
  blocks from pem files before importing.
2016-07-24 09:41:57 +02:00
ng0 578aeea6cd
gnu: perl-io-socket-ssl: Add IDN support.
* gnu/packages/web.scm (perl-io-socket-ssl)[propagated-inputs]: Add perl-uri
for IDN support.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-07-24 09:36:42 +03:00
ng0 73020459b3
gnu: perl-io-socket-ssl: Update to 2.033.
* gnu/packages/web.scm (perl-io-socket-ssl): Update to 2.033.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-07-24 09:36:42 +03:00
Efraim Flashner 763a17ba62
gnu: parallel: Update to 20160722.
* gnu/packages/parallel.scm (parallel): Update to 20160722.
2016-07-24 09:36:42 +03:00
Efraim Flashner fad51a1837
gnu: hplip: Update to 3.16.7.
* gnu/packages/cups.scm (hplip): Update to 3.16.7.
2016-07-24 09:35:58 +03:00
Efraim Flashner 7531b1fc4d
gnu: ghc-memory: Update to 0.13.
* gnu/packages/haskell.scm (ghc-memory): Update to 0.13.
2016-07-24 09:35:58 +03:00
Alex Griffin 92c2f6055d
gnu: Add trash-cli.
* gnu/packages/shellutils.scm (trash-cli): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-23 20:34:31 -04:00
Andreas Enge 2a69d4df7d
gnu: youtube-dl: Update to 2016.07.22.
* gnu/packages/video.scm (youtube-dl): Update to 2016.07.22.
2016-07-24 00:11:15 +02:00
Efraim Flashner a4ea25d347
gnu: offlineimap: Update to 7.0.0.
* gnu/packages/mail.scm (offlineimap): Update to 7.0.0.
[inputs]: Add python2-six.
[native-inputs]: Remove python2.
2016-07-24 00:30:02 +03:00
Andreas Enge a000f3c4a8
gnu: cook: Update source URL.
* gnu/packages/cook.scm (cook)[source]: Update URL.
2016-07-23 22:19:11 +02:00
Andreas Enge fe7fa35320
gnu: bitcoin-core: Build with bdb-5.3.
* gnu/packages/finance.scm (bitcoin-core)[inputs]: Replace bdb by bdb-5.3.
2016-07-23 20:19:58 +02:00
Tobias Geerinckx-Rice 6a3987b1ae
gnu: fish: Update to 2.3.1.
* gnu/packages/fish.scm (fish): Update to 2.3.1.
[home-page, source]: Use 'https' in the URL.
2016-07-23 20:18:14 +02:00
Tobias Geerinckx-Rice 389eb3fab7
gnu: Add lrzip.
* gnu/packages/compression.scm (lrzip): New variable.
2016-07-23 20:18:14 +02:00
ng0 f75f261f55
gnu: libepoxy: Update to 1.3.1.
* gnu/packages/gl.scm (libepoxy): Update to 1.3.1.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2016-07-23 12:56:08 +02:00
Ben Woodcroft e03a515304
gnu: fasttree: Update to 2.1.9.
* gnu/packages/bioinformatics.scm (fasttree): Update to 2.1.9.
2016-07-23 15:15:12 +10:00
Leo Famulari d227260d2f
Merge branch 'master' into core-updates
Resolved conflicts:
* gnu/packages/scheme.scm: Conflict in import of (guix licenses). On master,
"#:hide (openssl)" was used. On core-updates, "#:select (some licenses)" was
used. The latter won the conflict.
* gnu/packages/version-control.scm (git)[arguments]: Whitespace conflict
in 'install-shell-completion.
2016-07-22 18:58:31 -04:00
Leo Famulari d778fa5ff6
gnu: mozjs: Disable parallel build.
* gnu/packages/gnuzilla.scm (mozjs)[arguments]: Add
'#:parallel-build? #f'.
2016-07-22 17:44:31 -04:00
Alex Griffin 26ad4adb55
gnu: wesnoth: Update to 1.12.6.
* gnu/packages/games.scm (wesnoth): Update to 1.12.6.
2016-07-22 16:12:16 -04:00
Leo Famulari eddf9ae95e
gnu: opus: Update to 1.1.3.
* gnu/packages/xiph.scm (opus): Update to 1.1.3.
2016-07-22 14:02:13 -04:00
Leo Famulari 0f971a0475
gnu: Update URLs for sourceforge.net.
* gnu/packages/audio.scm: Update URLs pointing to sourceforge.net.
* gnu/packages/fonts.scm: Likewise.
* gnu/packages/gl.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/image.scm: Likewise.
* gnu/packages/lxde.scm: Likewise.
* gnu/packages/slim.scm: Likewise.
* gnu/packages/textutils.scm: Likewise.
2016-07-22 11:47:12 -04:00
Efraim Flashner 8ef843c711
gnu: aegis: Use 'modify-phases'.
* gnu/packages/version-control.scm (aegis)[arguments]: Use 'modify-phases'.
2016-07-22 18:24:22 +03:00
Efraim Flashner 2ce516d359
gnu: git: Use 'modify-phases'.
* gnu/packages/version-control.scm (git)[arguments]: Use 'modify-phases'.
2016-07-22 18:24:22 +03:00
Efraim Flashner bf3c57ff2d
gnu: cssc: Use 'modify-phases'.
* gnu/packages/version-control.scm (cssc)[arguments]: Use 'modify-phases'.
2016-07-22 18:24:22 +03:00
Efraim Flashner 7c5a145414
gnu: subversion: Use 'modify-phases'.
* gnu/packages/version-control.scm (subversion)[arguments]: Use
'modify-phases'.
2016-07-22 18:24:22 +03:00
Efraim Flashner ce84c924ac
gnu: subversion: Use https.
* gnu/packages/version-control.scm (subversion)[source]: Use https.
[home-page]: Use https.
2016-07-22 18:24:22 +03:00
Efraim Flashner aac42d7885
gnu: git-flow: Use 'modify-phases'.
* gnu/packages/version-control.scm (git-flow)[arguments]: Use
'modify-phases'.
2016-07-22 18:24:22 +03:00
Efraim Flashner 430e67a459
gnu: gnuplot: Update to upstream's re-release of 5.0.4.
* gnu/packages/maths.scm (gnuplot): Add a guix revision number to the
version scheme of gnuplot to force an update.
2016-07-22 18:24:22 +03:00
Efraim Flashner 18d4d10f34
gnu: enlightenment: Update to 0.21.1.
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.21.1.
2016-07-22 18:24:22 +03:00
Efraim Flashner 730c740e43
gnu: bazaar: Use 'modify-phases'.
* gnu/packages/version-control.scm (bazaar)[arguments]: Use
'modify-phases'.
2016-07-22 18:24:22 +03:00
Ricardo Wurmus f21403e2b6 gnu: icedtea-6: Generate keystore.
* gnu/packages/java.scm (icedtea-6)[arguments]: Add phase
"install-keystore".
[native-inputs]: Add nss-certs.
2016-07-22 17:10:25 +02:00
Ricardo Wurmus 9bc84dfea9 gnu: icedtea-6: Use modify-phases syntax.
* gnu/packages/java.scm (icedtea-6)[arguments]: Use modify-phases
  syntax.
2016-07-22 17:10:11 +02:00
Ricardo Wurmus 745ad37a78 gnu: nss-certs: Stop inheriting from nss package.
* gnu/packages/certs.scm (nss-certs): Stop inheriting from nss package.
2016-07-22 17:10:11 +02:00
Danny Milosavljevic c2f0dc6ed1
gnu: Add ptpython and ptpython2.
* gnu/packages/python.scm (ptpython, ptpython-2): New variables.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-07-22 15:06:05 +02:00
宋文武 782170c4f5
gnu: racket: Add more inputs.
* gnu/packages/scheme.scm (racket)[inputs]: Add glu, gmp, libpng, libx11,
mesa, mpfr, openssl and unixodbc.  Replace libjpeg-8 with libjpeg and
gtk+-2 with gtk+.
2016-07-22 19:09:20 +08:00
宋文武 e8c6811bf1
gnu: racket: Patch dynamically loaded libraries with absolute paths.
* gnu/packages/scheme.scm (racket)[arguments]: Patch 'ffi-lib' calls to
absolute paths in 'pre-configure' phase.  Remove 'wrap-programs' phase.
2016-07-22 19:09:11 +08:00
Daniel Pimentel 8d63dddac1
gnu: Add python-protobuf.
* gnu/packages/protobuf.scm (python-protobuf, python2-protobuf): New variables.

Co-authored-by: Leo Famulari <leo@famulari.name>
2016-07-22 02:22:49 -04:00
Leo Famulari d7cff656df
gnu: muparser: Update source URL.
* gnu/packages/maths.scm (muparser)[source]: Update source URL to new location.
Use URL-FETCH instead of SVN-FETCH. Update hash and package revision.
2016-07-21 18:25:20 -04:00
Leo Famulari de67e92288
gnu: Update URLs for sourceforge.net.
* gnu/packages/admin.scm: Update URLs pointing to sourceforge.net.
* gnu/packages/audacity.scm: Likewise.
* gnu/packages/audio.scm: Likewise.
* gnu/packages/bioinformatics.scm: Likewise.
* gnu/packages/boost.scm: Likewise.
* gnu/packages/cdrom.scm: Likewise.
* gnu/packages/code.scm: Likewise.
* gnu/packages/compression.scm: Likewise.
* gnu/packages/cups.scm: Likewise.
* gnu/packages/djvu.scm: Likewise.
* gnu/packages/docbook.scm: Likewise.
* gnu/packages/documentation.scm: Likewise.
* gnu/packages/flashing-tools.scm: Likewise.
* gnu/packages/fonts.scm: Likewise.
* gnu/packages/fontutils.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/ghostscript.scm: Likewise.
* gnu/packages/gl.scm: Likewise.
* gnu/packages/gnucash.scm: Likewise.
* gnu/packages/graphviz.scm: Likewise.
* gnu/packages/image.scm: Likewise.
* gnu/packages/libreoffice.scm: Likewise.
* gnu/packages/libusb.scm: Likewise.
* gnu/packages/linux.scm: Likewise.
* gnu/packages/lirc.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/mcrypt.scm: Likewise.
* gnu/packages/mp3.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/networking.scm: Likewise.
* gnu/packages/onc-rpc.scm: Likewise.
* gnu/packages/password-utils.scm: Likewise.
* gnu/packages/pdf.scm: Likewise.
* gnu/packages/perl.scm: Likewise.
* gnu/packages/photo.scm: Likewise.
* gnu/packages/popt.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/rdesktop.scm: Likewise.
* gnu/packages/screen.scm: Likewise.
* gnu/packages/swig.scm: Likewise.
* gnu/packages/tcl.scm: Likewise.
* gnu/packages/version-control.scm: Likewise.
* gnu/packages/video.scm: Likewise.
* gnu/packages/w3m.scm: Likewise.
* gnu/packages/web.scm: Likewise.
* gnu/packages/wm.scm: Likewise.
* gnu/packages/xdisorg.scm: Likewise.
* gnu/packages/xml.scm: Likewise.
2016-07-21 18:09:40 -04:00
Kei Kebreau a205d3f991
gnu: Add hexedit.
* gnu/packages/hexedit: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-07-21 14:06:05 -04:00
Tomáš Čech 24e964314e
services: Export *-service-type and *-configuration.
This allows users to use 'modify-services' and similar constructs for
all these service types.

* gnu/services/avahi.scm: export avahi-configuration.
* gnu/services/base.scm: export gpm-configuration and
rngd-configuration.
* gnu/services/databases.scm: export *-service-type and *-configuration.
* gnu/services/dbus.scm: export dbus-configuration.
* gnu/services/dict.scm: export dicod-service-type.
* gnu/services/lirc.scm: export lirc-configuration and
lirc-service-type.
* gnu/services/mail.scm: export dovecot-service-type.
* gnu/services/web.scm: export nginx-configuration and
nginx-service-type.
* gnu/services/xorg.scm: export screen-locker and screen-locker?.
* gnu/services/ssh.scm: export lsh-configuration and lsh-service-type.
* gnu/services/desktop.scm: export *-service, *-service-type
and *-configuration.
* gnu/services/networking.scm: export *-configuration
and *-service-type.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-07-21 18:53:27 +02:00
Efraim Flashner 427dda54f2
gnu: tesseract-ocr: Update to 3.04.01.
* gnu/packages/ocr.scm (tesseract-ocr): Update to 3.04.01.
[source]: Download from Github, add 'file-name' field, remove snippet.
[native-inputs]: Remove autoconf, automake, libtool.
[propagated-inputs]: Move leptonica ...
[inputs]: ... to here.
[arguments]: Remove 'autogen phase.
[home-page]: Move program's home-page to Github.
2016-07-21 17:18:42 +03:00
Efraim Flashner a9c64810cd
gnu: gnuplot: Update to 5.0.4.
* gnu/packages/maths.scm (gnuplot): Update to 5.0.4.
2016-07-21 13:56:51 +03:00
Efraim Flashner 873966e3e9
gnu: dovecot: Update to 2.2.25.
* gnu/packages/mail.scm (dovecot): Update to 2.2.25.
2016-07-21 13:56:13 +03:00
Efraim Flashner 132e14b4cc
gnu: texlive: Use https.
* gnu/packages/tex.scm (texlive-bin, texlive-texmf, texlive)[license]:
Use 'https' in the url.
[home-page]: Use 'https' in the url.
2016-07-21 12:56:17 +03:00
Efraim Flashner 29a56d8eaf
gnu: texlive: Update in-place source updates.
* gnu/packages/tex.scm (texlive-texmf-source, texlive-bin)[source]:
Update to 20160523b.
2016-07-21 12:46:12 +03:00
Leo Famulari d23d1ddf6e
gnu: msmtp: Update to 1.6.5.
* gnu/packages/mail.scm (msmtp): Update to 1.6.5.
[source]: Update source URL.
2016-07-21 01:43:01 -04:00
Eric Bavier 2908087013
gnu: superlu-dist: Remove non-free source.
* gnu/packages/maths.scm (superlu-dist)[source]: Replace non-free
mc64ad.c source with stub.
2016-07-20 21:16:25 -05:00
Eric Bavier 8787c555d9
gnu: slepc: Update to 3.7.1.
* gnu/packages/maths.scm (slepc): Update to 3.7.1.
2016-07-20 21:16:25 -05:00
Eric Bavier fafd623e49
gnu: petsc: Update to 3.7.2.
* gnu/packages/maths.scm (petsc): Update to 3.7.2.
[arguments]: Adjust scrubbed files.
2016-07-20 21:16:24 -05:00
Eric Bavier b730b43770
gnu: petsc: Make header generation reproducible.
* gnu/packages/maths.scm (petsc)[arguments]: Scrub timestamp from
  petscmachineinfo.h header.
2016-07-20 21:16:24 -05:00
Eric Bavier 64dcc28963
gnu: petsc: Use modify-phases.
* gnu/packages/maths.scm (petsc)[arguments]: Use modify-phases.
2016-07-20 21:16:24 -05:00
Eric Bavier 9474a4b3ec
gnu: openmpi: Make binaries reproducible.
* gnu/packages/mpi.scm (openmpi)[arguments]: Remove timestamps from
source files.  Delete installed configure logs.
2016-07-20 21:16:24 -05:00
Eric Bavier 6876590fd4
gnu: openmpi: Update to 1.10.3.
* gnu/packages/mpi.scm (openmpi): Update to 1.10.3.
[source]: Use https.
2016-07-20 21:15:37 -05:00
Eric Bavier 995a09e055
gnu: superlu: Update to 5.2.1.
* gnu/packages/maths.scm (superlu): Update to 5.2.1.
[source]: Remove non-free MC64 code.
[inputs]: Use openblas instead of lapack's BLAS.
[build-system]: Use cmake-build-system.
[arguments]: Remove custom phases and replace with CMake flags.
[license]: List additional licenses for some source and example files.
2016-07-20 18:31:16 -05:00
Eric Bavier d721c83a63
gnu: Add libhilbert.
* gnu/packages/maths.scm (libhilbert): New variable.
2016-07-20 18:31:16 -05:00
Ricardo Wurmus cdf8f39195
gnu: Add allegro-5.0.
* gnu/packages/game-development.scm (allegro-5.0): New variable.
2016-07-20 22:19:34 +02:00
Ricardo Wurmus 19d311b4f2
gnu: Add allegro.
* gnu/packages/game-development.scm (allegro): New variable.
2016-07-20 22:19:34 +02:00
Ludovic Courtès 7575655212
Merge branch 'master' into core-updates 2016-07-20 11:42:17 +02:00
Efraim Flashner 5f01078129
gnu: julia: Build with zlib.
* gnu/packages/julia.scm (julia)[inputs]: Add zlib.
2016-07-20 11:37:01 +03:00
Efraim Flashner c23c628ea7
Revert "gnu: julia: Build with zlib."
This reverts commit 95bf72eeb0.
2016-07-20 11:37:01 +03:00
Efraim Flashner 95bf72eeb0
gnu: julia: Build with zlib.
* gnu/packages/julia.scm (julia)[inputs]: Add zlib.
2016-07-20 09:11:16 +03:00
Leo Famulari 5d4c90ae02
gnu: gnutls: Update to 3.5.2.
* gnu/packages/tls.scm (gnutls): Update to 3.5.2.
[native-inputs]: Add net-tools.
2016-07-20 00:01:39 -04:00
Efraim Flashner 885fa1eec5
gnu: aria2: Update to 1.25.0.
* gnu/packages/bittorrent.scm (aria2): Update to 1.25.0.
2016-07-20 06:49:44 +03:00
Ricardo Wurmus 909147e43f
services: Add pam-limits-service.
* gnu/system/pam.scm (<pam-limits-entry>): New record type.
(pam-limits-entry, pam-limits-entry->string): New procedures.
* gnu/services/base.scm (pam-limits-service-type): New variable.
(pam-limits-service): New procedure.
* doc/guix.texi (Base Services): Document it.
2016-07-19 23:50:03 +02:00
Ludovic Courtès 8e9ba611cb
gnu: atlas: Use @example in description.
* gnu/packages/maths.scm (atlas)[description]: Use "@example".
2016-07-19 23:03:30 +02:00
Tobias Geerinckx-Rice d97c429a34
gnu: atlas: Use cpupower in description.
* gnu/packages/maths.scm (atlas)[description]: Replace 'cpufreq-selector'
with its replacement 'cpupower --governor'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
Tobias Geerinckx-Rice 58d6a1f227
gnu: Add cpupower.
* gnu/packages/linux.scm (cpupower): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
Tobias Geerinckx-Rice 592ccdd388
gnu: Add ssdeep.
* gnu/packages/datastructures.scm (ssdeep): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
David Craven 7fe3f8cf6e
gnu: mesa-utils: Update to 8.3.0.
* gnu/packages/gl.scm (mesa-utils): Update to 8.3.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
David Craven 3a92a5b36d
gnu: Order module imports in (gnu packages gl) alphabetically.
* gnu/packages/gl.scm: Order module imports alphabetically.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
David Craven 584f2e1bc1
gnu: gl: Change 'l:' prefix to 'license:'.
* gnu/packages/gl.scm: Change #:prefix l: to #:prefix license:.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
Efraim Flashner aab76e80d2
gnu: python-pyquery: Update to 1.2.13.
* gnu/packages/python.scm (python-pyquery): Update to 1.2.13.
2016-07-19 21:07:37 +03:00
Efraim Flashner d5ccd9abf6
gnu: python-cssselect: Update to 0.9.2.
* gnu/packages/python.scm (python-cssselect): Update to 0.9.2.
[source]: Use 'pypi-uri' format.
2016-07-19 21:03:31 +03:00
Efraim Flashner 58d1d816ba
gnu: python2-cssutils: Update to 1.0.1.
* gnu/packages/python.scm (python2-cssutils): Update to 1.0.1.
[source]: Use 'pypi-uri' format.
2016-07-19 21:00:52 +03:00
Efraim Flashner 31e8a074c7
gnu: calibre: Update to 2.62.0.
* gnu/packages/ebook.scm (calibre): Update to 2.62.0.
2016-07-19 20:47:25 +03:00
Efraim Flashner d58a32037e
gnu: python-lxml: Update to 3.6.0.
* gnu/packages/python.scm (python-lxml): Update to 3.6.0.
2016-07-19 20:11:32 +03:00
ng0 72fb1b24d9
gnu: Use HTTPS home-page URLs for PGP-related packages.
* gnu/packages/gnupg.scm (gnupg, gpgme, libassuan, libgcrypt, libgpg-error,
libksba, npth, pius, python-gnupg, signing-party)[home-page]: Use HTTPS URLs.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-18 23:48:42 -04:00
ng0 f04a7943f4
gnu: libassuan: Update to 2.4.3.
* gnu/packages/gnupg.scm (libassuan): Update to 2.4.3.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-18 23:46:32 -04:00
Eric Bavier 0935fb271b
gnu: llvm: Build without debugging symbols.
* gnu/packages/llvm.scm (llvm)[arguments]: Add #:build-type.
2016-07-18 20:28:21 -05:00
Eric Bavier 3b956a3392
gnu: llvm: Update to 3.8.1.
* gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 3.8.1.
(llvm-3.7, clang-runtime-3.7, clang-3.7): New variables.
(clang-runtime-from-llvm)[arguments]: Disable tests, which were not
being run for previous versions anyhow but now fail hard.
(clang-from-llvm): Add #:patches keyword argument.
* gnu/packages/patches/clang-3.8-libc-search-path.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Dennis Mungai <dmngaie@gmail.scm>
2016-07-18 20:28:21 -05:00
Eric Bavier 3ebc09057a
gnu: llvm: Update to 3.7.1.
* gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 3.7.1
(llvm-3.6, clang-runtime-3.6, clang-3.6): New variables.
2016-07-18 20:28:21 -05:00
Eric Bavier ee0774305f
gnu: llvm: Add libffi and zlib inputs.
* gnu/packages/llvm.scm (llvm)[inputs]: Add libffi and zlib.
[arguments]: Add cmake flag for libffi to #:configure-flags.

Co-authored-by: Dennis Mungai <dmngaie@gmail.com>
2016-07-18 20:28:21 -05:00
Eric Bavier ac00973cd9
gnu: llvm: Add "license:" prefix.
* gnu/packages/llvm.scm: Import (guix licenses) with "license:" prefix.
2016-07-18 20:28:21 -05:00
Eric Bavier a53c486dad
gnu: llvm: Update to 3.5.2.
* gnu/packages/llvm.scm (llvm-3.5): Update to 3.5.2.
2016-07-18 20:28:21 -05:00
Ludovic Courtès 2c2ec261a8
services: shepherd: Clarify error message about missing service.
Suggested by Tobias Geerinckx-Rice <me@tobias.gr>.

* gnu/services/shepherd.scm (assert-valid-graph)[assert-satisfied-requirements]:
Clarify error message.
2016-07-19 00:07:12 +02:00
Nicolas Goaziou a2d469afaf
gnu: giac-xcas: Update to 1.2.2-75.
* gnu/packages/algebra.scm (giac-xcas): Update to 1.2.2-75.
2016-07-18 22:39:09 +02:00
Leo Famulari 2d656a93db
Revert "gnu: gnutls: Fix test failure."
This reverts commit 1d14bf9f5f.
2016-07-18 12:47:18 -04:00
Mark H Weaver 273260646d
gnu: gd: Fix failing test on i686.
* gnu/packages/patches/gd-fix-test-on-i686.patch: New file.
* gnu/local.mk (dist_PATCH_DATA): Add it.
* gnu/packages/gd.scm (gd)[source]: Add the patch.
2016-07-18 12:36:01 -04:00
Leo Famulari 1d14bf9f5f
gnu: gnutls: Fix test failure.
* gnu/packages/patches/gnutls-fix-stale-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (gnutls)[replacement]: New field.
(gnutls/fixed): New variable.
2016-07-18 12:30:39 -04:00
Efraim Flashner 6aabc87d50
gnu: libinput: Update to 1.4.0.
* gnu/packages/freedesktop.scm (libinput): Update to 1.4.0.
2016-07-18 14:49:49 +03:00
Efraim Flashner cff826ba05
gnu: efl: Use 'modify-phases'.
* gnu/packages/enlightenment.scm (efl)[arguments]: Use 'modify-phases'.
2016-07-18 14:40:55 +03:00
Efraim Flashner ebb365ed57
gnu: efl: Remove valgrind from inputs.
* gnu/packages/enlightenment.scm (efl)[inputs]: Remove valgrind.
2016-07-18 14:29:04 +03:00
Efraim Flashner cb277904a4
gnu: python-gst: Update to 1.8.2.
* gnu/packages/gstreamer.scm (python-gst): Update to 1.8.2.
2016-07-18 14:11:21 +03:00
Efraim Flashner 443975ae8e
gnu: gst-libav: Update to 1.8.2.
* gnu/packages/gstreamer.scm (gst-libav): Update to 1.8.2.
2016-07-18 14:10:54 +03:00
Efraim Flashner 935742f38f
gnu: gst-plugins-ugly: Update to 1.8.2.
* gnu/packages/gstreamer.scm (gst-plugins-ugly): Update to 1.8.2.
2016-07-18 14:10:06 +03:00
Efraim Flashner 727a9a5bd4
gnu: gst-plugins-good: Update to 1.8.2.
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.8.2.
2016-07-18 14:09:36 +03:00
Efraim Flashner 0c19247cea
gnu: gst-plugins-base: Update to 1.8.2.
* gnu/pakcages/gstreamer.scm (gst-plugins-base): Update to 1.8.2.
2016-07-18 14:09:03 +03:00
Efraim Flashner ddaf9b1822
gnu: gstreamer: Update to 1.8.2.
* gnu/packages/gstreamer.scm (gstreamer): Update to 1.8.2.
2016-07-18 14:08:26 +03:00
Ludovic Courtès b1bf155ffd
tests: install: Generalize 'run-install'.
* gnu/tests/install.scm (%simple-installation-script): New variable.
Contains installation script formerly in 'run-install'.
(run-install): Add 'target-os', 'target-os-source', and #:script
parameters.  Honor them.
(qemu-command/writable-image): New procedure.
(%test-installed-os): Use it.
2016-07-18 01:26:03 +02:00
Ludovic Courtès 2bdd7ac17c
system: Honor the 'dependencies' field of file systems.
This allows mapped devices listed in 'dependencies' to be properly taken
into account.

Reported by Andreas Enge <andreas@enge.fr>.

* gnu/system.scm (mapped-device-user): Check whether DEVICE is a member
of the 'dependencies' of FS.
* tests/system.scm (%luks-device, %os-with-mapped-device): New variables.
("operating-system-user-mapped-devices")
("operating-system-boot-mapped-devices")
("operating-system-boot-mapped-devices, implicit dependency"): New tests.
2016-07-18 01:26:03 +02:00
Tobias Geerinckx-Rice 0b07350675
gnu: Add xdelta.
* gnu/packages/compression.scm (xdelta): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-18 01:26:03 +02:00
Ben Woodcroft 7593e50b26
gnu: diamond: Update to 0.8.15.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.15.
2016-07-18 00:06:21 +10:00
Efraim Flashner 67eb38572f
gnu: hoedown: Update to 3.0.7.
* gnu/packages/markdown.scm (hoedown): Update to 3.0.7.
2016-07-17 16:20:47 +03:00
Efraim Flashner 8400ba2125
gnu: stalonetray: Update to 0.8.3.
* gnu/packages/stalonetray.scm (stalonetray): Update to 0.8.3.
2016-07-17 16:14:46 +03:00
Efraim Flashner 988d1bad7b
gnu: python-simplejson: Update to 3.8.2.
* gnu/packages/python.scm (python-simplejson): Update to 3.8.2.
[source]: Use 'pypi-uri' format.
2016-07-17 15:16:19 +03:00
Efraim Flashner 287cfd1a08
gnu: behave: Update to 1.2.5.
* gnu/packages/python.scm (behave): Update to 1.2.5.
[source]: Use 'pypi-uri' format.
2016-07-17 15:15:03 +03:00
Efraim Flashner 4d4cf3dd99
gnu: python-coverage: Update to 4.1.
* gnu/packages/python.scm (python-coverage): Update to 4.1.
2016-07-17 15:15:03 +03:00
Ricardo Wurmus 2c0d8e0d09
gnu: eigensoft: Do not refer to "lapacke" output.
* gnu/packages/bioinformatics.scm (eigensoft)[inputs]: Remove reference
  to non-existing "lapacke" output.
2016-07-17 12:04:04 +02:00
Ricardo Wurmus 7b569b01d3
gnu: lapack: Build the LAPACKE library.
* gnu/packages/maths.scm (lapack)[arguments]: Add "-DLAPACKE=ON".
2016-07-17 11:09:31 +02:00
Ricardo Wurmus 012c8b3552
gnu: Add emacs-solarized-theme.
* gnu/packages/emacs.scm (emacs-solarized-theme): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus 480f7350d9
gnu: Add emacs-perspective.
* gnu/packages/emacs.scm (emacs-perspective): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus e203221f50
gnu: Add emacs-tagedit.
* gnu/packages/emacs.scm (emacs-tagedit): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus 3bcb304ea8
gnu: Add emacs-shell-switcher.
* gnu/packages/emacs.scm (emacs-shell-switcher): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus dbe38a3a58
gnu: Add emacs-undercover.
* gnu/packages/emacs.scm (emacs-undercover): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus 1f9a709710
gnu: Add emacs-shut-up.
* gnu/packages/emacs.scm (emacs-shut-up): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus b33f913d9c
gnu: Add emacs-smart-mode-line.
* gnu/packages/emacs.scm (emacs-smart-mode-line): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus 8d81016344
gnu: Add emacs-rich-minority.
* gnu/packages/emacs.scm (emacs-rich-minority): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus 6c04acaa6e
gnu: Add emacs-skewer-mode.
* gnu/packages/emacs.scm (emacs-skewer-mode): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus 1f8a951bf4
gnu: Add emacs-simple-httpd.
* gnu/packages/emacs.scm (emacs-simple-httpd): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus a46e3c0dc6
gnu: Add emacs-page-break-lines.
* gnu/packages/emacs.scm (emacs-page-break-lines): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus 07046e5f44
gnu: Add emacs-paren-face.
* gnu/packages/emacs.scm (emacs-paren-face): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus 7b9769b04d
gnu: Add emacs-znc.
* gnu/packages/emacs.scm (emacs-znc): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus 655684468e
gnu: Add emacs-fill-column-indicator.
* gnu/packages/emacs.scm (emacs-fill-column-indicator): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus d0e4378266
gnu: Add emacs-expand-region.
* gnu/packages/emacs.scm (emacs-expand-region): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus 0c5d837c82
gnu: Add emacs-espuds.
* gnu/packages/emacs.scm (emacs-espuds): New variable.
2016-07-17 11:04:45 +02:00
Ricardo Wurmus 1c32830b7d
gnu: Add emacs-el-mock.
* gnu/packages/emacs.scm (emacs-el-mock): New variable.
2016-07-17 11:04:45 +02:00
Efraim Flashner a228579883
gnu: Add rlwrap.
* gnu/packages/readline.scm (rlwrap): New variable.
2016-07-17 08:56:03 +03:00
Alex Griffin 334c00f2bc
gnu: Add reptyr.
* gnu/packages/screen.scm (reptyr): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-16 20:00:53 -04:00
Leo Famulari a1537ac2ba
gnu: gd: Fix CVE-2016-{5766,6128,6132,6214}.
* gnu/packages/patches/gd-CVE-2016-5766.patch,
gnu/packages/patches/gd-CVE-2016-6128.patch,
gnu/packages/patches/gd-CVE-2016-6132.patch,
gnu/packages/patches/gd-CVE-2016-6214.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gd.scm (gd): Use patches.
2016-07-16 12:49:22 -04:00
Leo Famulari b9174ff449
gnu: gd: Update to 2.2.2 [fixes CVE-2016-{5767,6161}].
* gnu/packages/gd.scm (gd): Update to 2.2.2.
2016-07-16 12:49:21 -04:00
Leo Famulari e31f05d435
gnu: pidgin: Update to 2.11.0 [security fixes].
Fixes CVE-2016-{2365,2366,2367,2368,2369,2370,2371,2372,2373,2374,2375,2376,
2377,2378,2379,2380,4323}.

* gnu/packages/messaging.scm (pidgin): Update to 2.11.0.
2016-07-16 11:54:20 -04:00
Ricardo Wurmus 12356eb8b0
gnu: geda-gaf: Update to 1.9.2.
* gnu/packages/engineering.scm (geda-gaf): Update to 1.9.2.
2016-07-16 17:19:26 +02:00
Ricardo Wurmus 2352c97df4
gnu: geda-gaf: Use modify-phases syntax.
* gnu/packages/engineering.scm (geda-gaf)[arguments]: Use modify-phases
  syntax.
2016-07-16 17:19:22 +02:00
Tobias Geerinckx-Rice fb8a5d633a
gnu: Add encfs.
* gnu/packages/crypto.scm (rlog, encfs): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-16 14:41:39 +02:00
Ludovic Courtès b9bb50c608
services: dbus: Synchronize startup using dbus-daemon's PID file.
* gnu/services/dbus.scm (dbus-shepherd-service): Pass #:pid-file to
'make-forkexec-constructor'.
2016-07-16 14:41:39 +02:00
Andreas Enge ee6a5d0e3e
gnu: lm-sensors: Add alternate source URL.
* gnu/packages/linux.scm (lm-sensors)[source]: Add URL.
2016-07-15 19:18:36 +02:00
Leo Famulari 2d74d94b17 gnu: borg: Update to 1.0.6.
* gnu/packages/backup.scm (borg): Update to 1.0.6.
[source]: Use pypi-uri.
2016-07-15 12:20:29 -04:00
David Craven 71b0601a97
services: Add 'dropbear-service'.
* gnu/services/ssh.scm (<dropbear-configuration>): New record type.
(dropbear-activation, dropbear-shepherd-service, dropbear-service): New
procedures.
(dropbear-service-type): New variable.
* doc/guix.texi (Networking Services): Document it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-07-15 17:57:28 +02:00
David Craven 2102ae2e30
gnu: lsh: Move to (gnu packages ssh)
* gnu/packages/lsh.scm: Remove.  Move 'lsh and liboop' to...
* gnu/packages/ssh.scm (liboop, lsh): ... here.  New variables.
* gnu/services/ssh.scm, gnu/services/base.scm: Adjust accordingly.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-15 17:57:28 +02:00
Leo Famulari e538a245f3
gnu: diffoscope: Update to 54.
* gnu/packages/package-management.scm (diffoscope): Update to 54.
2016-07-15 11:40:02 -04:00
Tobias Geerinckx-Rice 7fb18f578a
gnu: Import (guix licenses) with #:prefix.
* gnu/packages/crypto.scm: Add 'license:' #:prefix for (guix licenses).

Signed-off-by: Andreas Enge <andreas@enge.fr>
2016-07-15 14:31:37 +02:00
Andreas Enge e05647add7
Update e-mail address for Tobias Geerinckx-Rice.
* .mailmap: Add Tobias Geerinckx-Rice.
* gnu/packages/disk.scm: Replace "tobias.geerinckx.rice@gmail.com" with
"me@tobias.gr".
* gnu/packages/linux.scm: Likewise.
* gnu/packages/networking.scm: Likewise.

Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr>
2016-07-15 14:29:22 +02:00
Andreas Enge f0fbf2c11c
install: Add mdadm to the image.
* gnu/system/install.scm (installation-os)[packages]: Add mdadm.
2016-07-15 10:41:14 +02:00
Alex Vong 9ce2a95c30
gnu: racket: Update to 6.5.
* gnu/packages/scheme.scm (racket): Update to 6.5.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2016-07-15 10:31:02 +02:00
Leo Famulari f0344d9369
gnu: git: Update to 2.9.1.
* gnu/packages/version-control.scm (git): Update to 2.9.1.
(git-manpages)[source]: Update hash.
2016-07-14 16:58:55 -04:00
Ricardo Wurmus 6619f9c769
gnu: Add eigensoft.
* gnu/packages/bioinformatics.scm (eigensoft): New variable.
2016-07-14 08:58:35 +02:00
Efraim Flashner 42d6d0d0d6
gnu: python-setuptools-scm: Update to 1.11.1.
* gnu/packages/python.scm (python-setuptools-scm): Update to 1.11.1.
2016-07-14 05:51:03 +03:00
Ludovic Courtès 2d94702ff4
system: Change the shell of 'nobody' to 'nologin'.
Fixes <http://bugs.gnu.org/23971>.
Reported by Vincent Legoll <vincent.legoll@gmail.com>.

* gnu/system/shadow.scm (%base-user-accounts): Add 'shell' field.  Set
'home-directory' to "/nonexistent".
2016-07-13 23:42:35 +02:00
Jan Nieuwenhuizen 4c7260011e
gnu: grub: Update to 2.02~beta3.
* gnu/packages/grub.scm (grub): Update to 2.02~beta3.
[arguments]: Modify tests/grub_func_test.in in 'patch-stuff' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-13 23:26:04 +02:00
Ludovic Courtès 66f8f5f9c3
gnu: screen: Remove unneeded configure flags.
* gnu/packages/screen.scm (screen)[arguments]: Remove --infodir and
--mandir, which are no longer needed.
2016-07-13 23:26:04 +02:00
George Clemmer a7e7981c7d
gnu: screen: Support 256 colors.
* gnu/packages/screen.scm (screen)[arguments]: Pass --enable-colors256.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-13 23:26:04 +02:00
Mark H Weaver 7a7d6b2bde
gnu: linux-libre: Update to 4.6.4.
* gnu/packages/linux.scm (linux-libre): Update to 4.6.4.
2016-07-12 22:09:08 -04:00
Mark H Weaver 8f1488c639
gnu: linux-libre-4.4: Update to 4.4.15.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.15.
2016-07-12 22:08:58 -04:00
Jan Nieuwenhuizen abba1d087e
gnu: Add gptfdisk.
* gnu/packages/disk.scm (gptfdisk): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-13 00:32:21 +02:00
Leo Famulari 91f9f33a19
Revert "gnu: Add python-imagesize."
This reverts commit d8fa9cf7f4.
2016-07-12 18:21:25 -04:00
Leo Famulari ced40bd7b5
Revert "gnu: Add python-alabaster."
This reverts commit 15c36240f0b9ab3e8dc0b57702bb6a5174e4ad58.
2016-07-12 18:21:24 -04:00
Leo Famulari ce09c02c4c
Revert "gnu: Add python-snowballstemmer."
This reverts commit b3283dbaf395e024b6d88e63dbb0ccff42209f28.
2016-07-12 18:21:24 -04:00
Leo Famulari 1a27944905
Revert "gnu: python-sphinx: Update to 1.4.4."
This reverts commit efb386ca5c07c5a4571de8561fd5dcd2a4d9cec7.
2016-07-12 18:21:24 -04:00
Leo Famulari bfd77809ec
Revert "gnu: python-sphinx-rtd-theme: Update to 0.1.9."
This reverts commit e1257225e7bb211e3dd8d9373fb5a81fe83b6baf.
2016-07-12 18:21:23 -04:00
Ludovic Courtès bdff55eac3
gnu: emacs-flycheck: Add missing dependency on emacs-seq.
Fixes a regression introduced in
afb6fdaa5d.

* gnu/packages/emacs.scm (flycheck)[propagated-inputs]: Add EMACS-SEQ.
2016-07-12 22:47:08 +02:00
Ludovic Courtès c1629416d8
gnu: Remove unneeded 'imported-modules' fields for 'origin'.
* gnu/packages/engineering.scm (fastcap)[source](modules,
imported-modules): Remove.
* gnu/packages/wm.scm (awesome)[source](imported-modules): Remove.
* tests/packages.scm ("package-source-derivation, snippet"): Remove
'imported-modules' field.
2016-07-12 22:47:08 +02:00
Ludovic Courtès a91c3fc727
services: <shepherd-service> no longer has an 'imported-modules' field.
* gnu/services/shepherd.scm (<shepherd-service>)[imported-modules]:
Remove.
(%default-imported-modules): Make private.
(shepherd-service-file): Use 'with-imported-modules'.
(shepherd-configuration-file): Remove 'modules' and the calls to
'imported-modules' and 'compiled-modules'.  Use
'with-imported-modules' instead.
* doc/guix.texi (Shepherd Services): Adjust accordingly.
* gnu/services/base.scm (file-system-shepherd-service): Use
'with-imported-modules'.  Remove 'imported-modules' field.
* gnu/system/mapped-devices.scm (device-mapping-service-type): Remove
'imported-modules'.
(open-luks-device): Use 'with-imported-modules'.
* gnu/tests.scm (marionette-shepherd-service): Remove 'imported-modules'
field and use 'with-imported-modules'.
2016-07-12 22:47:08 +02:00
Ludovic Courtès fd12989398
gnu: Use 'gexp->file' in conjunction with 'with-imported-modules'.
* gnu/services.scm (activation-script): Remove code to set '%load-path'
and use 'with-imported-modules' instead.
(cleanup-gexp): Likewise.
* gnu/system/vm.scm (%vm-module-closure): New variable.
(expression->derivation-in-linux-vm): Remove #:modules.
[loader]: Remove code to set '%load-path'.
[builder]: Use %VM-MODULE-CLOSURE.
(qemu-image): Use 'with-imported-modules'.
2016-07-12 22:47:08 +02:00
Ludovic Courtès 2b4185792d
gexp: 'gexp->file' emits code to set '%load-path'.
* guix/gexp.scm (gexp->file): Add #:set-load-path? parameter and honor it.
* gnu/system.scm (operating-system-parameters-file): Pass
  #:set-load-path? #f.
* doc/guix.texi (G-Expressions): Adjust accordingly.
2016-07-12 22:47:08 +02:00
Ludovic Courtès 43dcce8674
linux-container: Fix list of imported modules.
This fixes a regression introduced in
958dd3ce68.

* gnu/system/linux-container.scm (container-script)[script]: Add (guix
combinators) to the list of imported modules.
2016-07-12 22:47:08 +02:00
Ludovic Courtès 4ee96a7912
gnu: Switch to 'with-imported-modules'.
* gnu/services.scm (directory-union): Use 'with-imported-modules'
instead of the '#:modules' argument of 'computed-file'.
* gnu/services/base.scm (udev-rules-union): Likewise.
* gnu/services/dbus.scm (system-service-directory): Likewise.
* gnu/services/desktop.scm (wrapped-dbus-service):
(polkit-directory): Likewise.
* gnu/services/networking.scm (tor-configuration->torrc): Likewise.
* gnu/services/xorg.scm (xorg-configuration-directory): Likewise.
* gnu/system/install.scm (self-contained-tarball): Likewise.
* gnu/system/linux-container.scm (container-script): Likewise.
* gnu/system/linux-initrd.scm (expression->initrd): Likewise, and
remove #:modules parameter.
(flat-linux-module-directory): Use 'with-imported-modules'.
(base-initrd): Likewise.
* gnu/system/locale.scm (locale-directory): Likewise.
* gnu/system/shadow.scm (default-skeletons): Likewise.
* gnu/system/vm.scm (expression->derivation-in-linux-vm): Likewise.
* gnu/tests/base.scm (run-basic-test): Likewise.
* gnu/tests/install.scm (run-install): Likewise.
* doc/guix.texi (Initial RAM Disk): Update 'expression->initrd'
documentation.
2016-07-12 22:47:08 +02:00
Efraim Flashner 08858812b5
gnu: obs: Remove compiler flags for non-Intel hardware.
* gnu/packages/video.scm (obs)[arguments]: If compiling for arm or mips
devices then don't add Intel specific compiler flags.
2016-07-12 18:14:22 +03:00
Ricardo Wurmus 17dc32a400
gnu: Add Ribotaper.
* gnu/packages/bioinformatics.scm (ribotaper): New variable.
2016-07-12 12:19:39 +02:00
Ricardo Wurmus 9a8f309cf1
gnu: Add bedtools-2.18.
* gnu/packages/bioinformatics.scm (bedtools-2.18): New variable.
2016-07-12 12:19:15 +02:00
Efraim Flashner 34c553b07e
gnu: xscreensaver: Update to 5.35.
* gnu/packages/xdisorg.scm (xscreensaver): Update to 5.35.
2016-07-12 10:34:43 +03:00
Efraim Flashner 46cd684e2c
gnu: sxhkd: Update to 0.5.6.
* gnu/packages/xdisorg.scm (sxhkd): Update to 0.5.6.
2016-07-12 09:59:10 +03:00
Efraim Flashner 1f1e620f88
gnu: mtdev: Update to 1.1.5.
* gnu/packages/xdisorg.scm (mtdev): Update to 1.1.5.
2016-07-12 09:45:07 +03:00
Efraim Flashner af2b0b1507
gnu: libxkbcommon: Update to 0.6.1.
* gnu/packages/xdisorg.scm (libxkbcommon): Update to 0.6.1.
2016-07-12 09:34:24 +03:00
Efraim Flashner 16d8f9beb5
gnu: arandr: Update to 0.1.9.
* gnu/packages/xdisorg.scm (arandr): Update to 0.1.9.
2016-07-12 09:29:57 +03:00
Leo Famulari 6dc4d4655e
gnu: mpd: Update to 0.19.17.
* gnu/packages/mpd.scm (mpd): Update to 0.19.17.
2016-07-12 01:54:47 -04:00
Ben Woodcroft 51d8039b4a
gnu: parallel: Update to 20160622.
* gnu/packages/parallel.scm (parallel): Update to 20160622.
2016-07-12 14:47:50 +10:00
Efraim Flashner 5edf2f0561
gnu: grue-hunter: Adapt to gzip-1.8 update.
* gnu/packages/games.scm (grue-hunter)[arguments]: Change gunzip call to
gzip call, add `-d' to the gzip command.
2016-07-11 16:52:41 +03:00
Efraim Flashner 38e9373b0d
gnu: glibc-2.21: Fix substitutes in glibc-2.21.
* gnu/packages/base.scm (glibc-2.21)[arguments]: Add back substitution
for /bin/pwd which was removed in the update of glibc to 2.23.
2016-07-11 16:52:40 +03:00
Efraim Flashner 4277313883
gnu: exim: Adjust to pcre output split.
* gnu/packages/mail.scm (exim)[native-inputs]: Add pcre:bin.
[inputs]: Remove pcre.
2016-07-11 16:52:36 +03:00
Matthew Jordan cdd8e0776e
gnu: Add Tmux Themepack.
* gnu/packages/tmux.scm (tmux-themepack): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-10 15:18:17 -04:00
Efraim Flashner 8ac012d0ca
gnu: help2man: Update to 1.47.4.
* gnu/packages/man.scm (help2man): Update to 1.47.4.
2016-07-10 21:34:37 +03:00
Efraim Flashner c635ff8369
gnu: man-pages: Update to 4.0.6.
* gnu/packages/man.scm (man-pages): Update to 4.0.6.
2016-07-10 21:34:37 +03:00
Efraim Flashner dfce38993e
gnu: man-db: Update to 2.7.5.
* gnu/packages/man.scm (man-db): Update to 2.7.5.
2016-07-10 21:34:37 +03:00
Efraim Flashner cf1dc4b7e6
gnu: obs: Update to 0.15.1.
* gnu/packages/video.scm (obs): Update to 0.15.1.
2016-07-10 21:34:37 +03:00
Efraim Flashner 5e3f68e67c
gnu: libbluray: Update to 0.9.3.
* gnu/packages/video.scm (libbluray): Update to 0.9.3.
2016-07-10 21:34:37 +03:00
Ricardo Wurmus 0e6ee10c07
gnu: libmtp: Update to 1.1.11.
* gnu/packages/patches/libmtp-devices.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/libusb.scm (libmtp): Update to 1.1.11.
2016-07-10 18:02:04 +02:00
Ben Woodcroft 7f575d3e56
gnu: diamond: Update to 0.8.12.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.12.
2016-07-10 22:32:57 +10:00
Alex Griffin 0e74bb5bd6
gnu: Add gnome-mpv.
* gnu/packages/video.scm (gnome-mpv): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-07-10 07:11:08 +03:00
Alex Griffin 6cf83e3f83
gnu: mpv: Enable shared library support.
* gnu/packages/video.scm (mpv): Enable shared library support.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-07-10 07:10:55 +03:00
Efraim Flashner 9d5448f35f
gnu: ccache: Update to 3.2.5.
* gnu/packages/ccache.scm (ccache): Update to 3.2.5.
[native-inputs]: Add which.
2016-07-10 06:48:27 +03:00
Efraim Flashner e9fd10a83b
gnu: ldb: Update to 1.1.26.
* gnu/packages/samba.scm (ldb): Update to 1.1.26.
2016-07-10 06:48:27 +03:00
Efraim Flashner ea26457dad
gnu: tevent: Update to 0.9.28.
* gnu/packages/samba.scm (tevent): Update to 0.9.28.
2016-07-10 06:48:27 +03:00
Efraim Flashner 67e7452dda
gnu: talloc: Update to 2.1.7.
* gnu/packages/samba.scm (talloc): Update to 2.1.7.
2016-07-10 06:48:27 +03:00
Efraim Flashner 8b21d22d6a
gnu: samba: Update to 4.3.11 [fixes CVE-2016-2119].
* gnu/packages/samba.scm (samba): Update to 4.3.11.
2016-07-10 06:48:27 +03:00
Leo Famulari 1a6d3d2df7
gnu: dropbear: Update to 2016.73.
* gnu/packages/ssh.scm (dropbear): Update to 2016.73.
2016-07-09 19:38:36 -04:00
Danny Milosavljevic a502dfbf4c
gnu: Add python-jedi.
* gnu/packages/python.scm (python-jedi, python2-jedi): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-09 14:12:14 -04:00
宋文武 8b5ed303dd
gnu: conky: Update to 1.10.3.
* gnu/packages/conky.scm (conky): Update to 1.10.3.
[arguments]: Add #:configure-flags.
[inputs]: Add libxinerama.
2016-07-09 20:50:38 +08:00
Ben Woodcroft ec2a67de88
gnu: Add python-dendropy.
* gnu/packages/bioinformatics.scm (python-dendropy, python2-dendropy): New
variables.
* gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-07-09 08:00:34 +10:00
Ben Woodcroft c11f79a49e
gnu: star: Restrict supported systems to 64-bit systems.
* gnu/packages/bioinformatics.scm (star)[supported-systems]: Restrict to
x86_64-linux and mips64el-linux.
2016-07-08 22:10:05 +10:00
Leo Famulari 71ca053928
gnu: rxvt-unicode: Update to 9.22.
* gnu/packages/xdisorg.scm (rxvt-unicode): Update to 9.22.
2016-07-07 20:46:29 -04:00
ng0 6c12abbdb2
services: nginx: Fix typo.
* gnu/services/web.scm (nginx-service): Fix typo.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-07 20:42:58 -04:00
John J. Foerch 614023981a
gnu: Add di.
* gnu/packages/admin.scm (di): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-07 20:38:49 -04:00
Efraim Flashner 1a5fd02a82
gnu: getmail: Update to 4.49.0.
* gnu/packages/mail.scm (getmail): Update to 4.49.0.
2016-07-07 20:02:11 +03:00
Efraim Flashner a0b15f5eef
gnu: python-pyusb: Update to 1.0.0.
* gnu/packages/libusb.scm (python-pyusb): Update to 1.0.0.
2016-07-07 19:59:25 +03:00
Efraim Flashner 6b810897a0
gnu: python-websocket-client: Update to 0.37.0.
* gnu/packages/python.scm (python-websocket-client): Update to 0.37.0.
[source]: Use pypi uri format.
2016-07-07 19:44:11 +03:00
Efraim Flashner 697e86ddca
gnu: ansible: Update to 2.1.0.0.
* gnu/packages/admin.scm (ansible): Update to 2.1.0.0.
[source]: Use pypi format.
2016-07-07 18:59:28 +03:00
Efraim Flashner 88535a4453
gnu: python-psutil: Update to 4.3.0.
* gnu/packages/python.scm (python-psutil): Update to 4.3.0.
[home-page]: Update home-page.
2016-07-07 17:38:20 +03:00
Ben Woodcroft d285657eae
gnu: bedtools: Update to 2.26.0.
* gnu/packages/bioinformatics.scm (bedtools): Update to 2.26.0.
2016-07-07 23:27:19 +10:00
Ben Woodcroft 7c7643a7f0
gnu: diamond: Update to 0.8.11.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.11.
2016-07-07 18:21:10 +08:00
Efraim Flashner 0b166a7559
gnu: quassel: Build with modular qt.
* gnu/packages/irc.scm (quassel)[inputs]: Remove qt, add qtbase,
qttools, qtscript.
[arguments]: Disable webkit.
2016-07-07 12:23:39 +03:00
Efraim Flashner 5f2074ca66
gnu: snorenotify: Build with modular qt.
* gnu/packages/kde.scm (snorenotify)[inputs]: Remove qt, add qtbase, qttools.
2016-07-07 12:23:39 +03:00
Efraim Flashner 05b9c00e59
gnu: qca: Build with qtbase.
* gnu/packages/kde.scm (qca)[inputs]: Remove qt, add qtbase.
2016-07-07 12:23:39 +03:00
Efraim Flashner 4742c4decc
gnu: Add qtscript.
* gnu/packages/qt.scm (qtscript): New variable.
2016-07-07 12:23:39 +03:00
Ricardo Wurmus 66cf0f054d
gnu: Add r-domc.
* gnu/packages/statistics.scm (r-domc): New variable.
2016-07-07 10:46:39 +02:00
Ricardo Wurmus 9003957e53
gnu: Add r-multitaper.
* gnu/packages/statistics.scm (r-multitaper): New variable.
2016-07-07 10:46:30 +02:00
Ricardo Wurmus 274da826f9
gnu: Add r-seqinr.
* gnu/packages/bioinformatics.scm (r-seqinr): New variable.
2016-07-07 10:46:17 +02:00
Ricardo Wurmus fdd0f7b2a3
gnu: Add r-ade4.
* gnu/packages/statistics.scm (r-ade4): New variable.
2016-07-07 10:46:05 +02:00
Efraim Flashner 939cf41c3f
gnu: python-oslosphinx: Update to 4.3.0.
* gnu/packages/openstack.scm (python-oslosphinx): Update to 4.3.0.
2016-07-07 06:54:06 +03:00
Efraim Flashner 8157af2e09
gnu: khmer: Limit to x86_64 systems only.
* gnu/packages/bioinformatics.scm (khmer)[supported-systems]: New field.
2016-07-07 06:33:28 +03:00
Leo Famulari 25a814ceab
gnu: httpd: Update to 2.4.23.
Fixes CVE-2016-4979.

* gnu/packages/web.scm (httpd): Update to 2.4.23.
2016-07-06 14:37:46 -04:00
Efraim Flashner 15ca556bbc
gnu: pumpa: Remove extra input.
* gnu/packages/pumpio.scm (pumpa)[inputs]: Remove qjson.
2016-07-06 21:22:36 +03:00
Roel Janssen 8f82641ac9
gnu: Add emacs-hl-todo.
* gnu/packages/emacs.scm (emacs-hl-todo): New variable.
2016-07-06 19:02:13 +02:00
Federico Beffa 2d634d9b7e gnu: texlive: Fix 'texmf-local' search path.
* gnu/packages/tex.scm (texlive, texlive-minimal): Add
  'native-search-paths'.
  (texlive-texmf): Correct 'TEXMFLOCAL' definition in 'texmf.cnf' in
  'texmf-config' phase.
2016-07-06 18:23:03 +02:00
Roel Janssen 41184943ae
gnu: Add emacs-ess.
* gnu/packages/emacs.scm (emacs-ess): New variable.
2016-07-06 13:25:50 +02:00
Ricardo Wurmus 26112c0abb
gnu: python-numexpr: Update to 2.6.0.
* gnu/packages/python.scm (python-numexpr): Update to 2.6.0.
2016-07-06 12:02:18 +02:00
Ben Woodcroft 975cd29a98
gnu: r-ggplot2: Add r-svglite to propagated-inputs.
* gnu/packages/statistics.scm (r-ggplot2)[propagated-inputs]: Add
r-svglite.
2016-07-06 15:17:29 +08:00
Ben Woodcroft 3aebedcc02
gnu: Add r-svglite.
* gnu/packages/statistics.scm (r-svglite): New variable.
2016-07-06 15:17:29 +08:00
Ben Woodcroft c5940b157e
gnu: Add r-gdtools.
* gnu/packages/statistics.scm (r-gdtools): New variable.
2016-07-06 15:17:29 +08:00
Efraim Flashner 6baa83d283
gnu: sudo: Update to 1.8.17p1.
* gnu/packages/admin.scm (sudo): Update to 1.8.17p1.
[source]: Remove patch.
* gnu/packages/patches/sudo-CVE-2015-5602.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-07-06 07:28:09 +03:00
Efraim Flashner fda746b198
gnu: menu-cache: Update to 1.0.1.
* gnu/packages/lxde.scm (menu-cache): Update to 1.0.1.
2016-07-05 22:36:13 +03:00
Efraim Flashner d78c952dfd
gnu: lxtask: Update to 0.1.7.
* gnu/packages/lxde.scm (lxtask): Update to 0.1.7.
2016-07-05 22:33:20 +03:00
Efraim Flashner d7ec759a7a
gnu: lxrandr: Update to 0.3.1.
* gnu/packages/lxde.scm (lxrandr): Update to 0.3.1.
2016-07-05 22:30:38 +03:00
Efraim Flashner 2c2a9ef79e
gnu: lxappearance: Update to 0.6.2.
* gnu/packages/lxde.scm (lxappearance): Update to 0.6.2.
2016-07-05 22:27:11 +03:00
Ricardo Wurmus 5fb5dffbd4
gnu: Add multiqc.
* gnu/packages/bioinformatics.scm (multiqc): New variable.
2016-07-05 16:32:37 +02:00
Roel Janssen 091963c69b
gnu: Add perltidy.
* gnu/packages/perl.scm (perltidy): New variable.
2016-07-05 16:12:23 +02:00
Ricardo Wurmus 1f1b20b8be
gnu: Add bits.
* gnu/packages/bioinformatics.scm (bits): New variable.
2016-07-05 15:43:36 +02:00
Manolis Ragkousis 9a745d76f6
gnu: cross-gcc-arguments: Disable libitm, libvtv and libsanitizer.
* gnu/packages/cross-base.scm (cross-gcc-arguments)[arguments]: Add
  "--disable-libitm", "--disable-libvtv" and "--disable-libsanitizer"
  when libc is not present.
2016-07-05 14:55:21 +03:00
Ricardo Wurmus 66e40e0065
gnu: Add EMBOSS.
* gnu/packages/bioinformatics.scm (emboss): New variable.
2016-07-05 12:32:12 +02:00
Ricardo Wurmus aae8ba4746
gnu: Add libharu.
* gnu/packages/pdf.scm (libharu): New variable.
2016-07-05 12:26:38 +02:00
Alex Sassmannshausen 5082eac957
gnu: Add perl-list-someutils.
* gnu/packages/perl.scm (perl-list-someutils): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:12:35 +02:00
Alex Sassmannshausen 8bcafb7440
gnu: Add perl-list-compare.
* gnu/packages/perl.scm (perl-list-compare): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:12:22 +02:00
Alex Sassmannshausen 056575421e
gnu: Add perl-io-captureoutput.
* gnu/packages/perl.scm (perl-io-captureoutput): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:12:04 +02:00
David Craven b58cbf9ac5
services: Add rngd-service.
* gnu/services/base.scm (<rngd-configuration>): New record type.
(rngd-service-type): New variable.
(rngd-service): New procedure.
* doc/guix.texi (Base Services): Document it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-05 11:10:01 +02:00
Ricardo Wurmus cf91cfc0c4
gnu: testdisk: Update to 7.0.
* gnu/packages/admin.scm (testdisk): Update to 7.0.
2016-07-05 08:54:47 +02:00
Ricardo Wurmus d6a08ec0c6
gnu: testdisk: Add NTFS support.
* gnu/packages/admin.scm (testdisk)[inputs]: Add ntfs-3g.
2016-07-05 08:54:39 +02:00
Efraim Flashner 0adc21c293
gnu: Add python2-pytest-cache.
* gnu/packages/python.scm (python2-pytest-cache): New variable.
(python-pytest-cache)[properties]: New field.
2016-07-04 22:47:15 +03:00
Roel Janssen fa8af53e99
gnu: Add scrollkeeper.
* gnu/packages/documentation.scm (scrollkeeper): New variable.
2016-07-04 21:32:31 +02:00
ng0 42c4b24646
gnu: python2-pythondialog: Update to 3.4.0.
* gnu/packages/python.scm (python2-pythondialog): Update to 3.4.0.
[source]: Use pypi-uri.

Co-authored-by: Leo Famulari <leo@famulari.name>
2016-07-04 14:35:24 -04:00
Kei Kebreau 35e2e49577
gnu: Add chromium-bsu.
* gnu/packages/games.scm (chromium-bsu): New variable.
2016-07-04 11:36:38 -04:00
Roel Janssen 744004a31f
gnu: Add r-edger.
* gnu/packages/bioinformatics.scm (r-edger): New variable.
2016-07-04 14:49:07 +02:00
Roel Janssen 7d4224d794
gnu: Add r-limma.
* gnu/packages/bioinformatics.scm (r-limma):  New variable.
2016-07-04 14:39:16 +02:00
Roel Janssen 7034791aa2
gnu: Add emacs-eprime.
* gnu/packages/emacs.scm (emacs-eprime): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-07-04 10:14:18 +03:00
Alex Kost e446182e38
gnu: guix: Add emacs-magit-popup to propagated-inputs.
* gnu/packages/package-management.scm (guix-0.10.0): Add
'emacs-magit-popup' to make it possible to use "M-x guix" command.
2016-07-04 10:14:18 +03:00
Alex Kost c1562e3de1
gnu: Add emacs-magit-popup.
* gnu/packages/emacs.scm (emacs-magit-popup): New variable.
2016-07-04 10:14:18 +03:00
ng0 7012e2c716
gnurl: Update to 7.48.0.
* gnu/packages/gnunet.scm (gnurl): Update to 7.48.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-07-04 10:01:12 +03:00
Leo Famulari 9852994842
gnu: python-sphinx-rtd-theme: Update to 0.1.9.
* gnu/packages/python.scm (python-sphinx-rtd-theme, python2-sphinx-rtd-theme):
Update to 0.1.9.
2016-07-03 22:24:45 -04:00
Leo Famulari 5ebd95202c
gnu: python-sphinx: Update to 1.4.4.
* gnu/packages/python.scm (python-sphinx, python2-sphinx): Update to 1.4.4.
[source]: Use pypi-uri.
[inputs]: Add python-alabaster, python-babel, python-imagesize, python-six.
[propagated-inputs]: New field.
2016-07-03 22:24:45 -04:00
Leo Famulari 936984b421
gnu: Add python-snowballstemmer.
* gnu/packages/python.scm (python-snowballstemmer, python2-snowballstemmer): New
variables.
2016-07-03 22:24:44 -04:00
Leo Famulari afcb871954
gnu: Add python-alabaster.
* gnu/packages/python.scm (python-alabaster, python2-alabaster): New variables.
2016-07-03 22:24:44 -04:00
Leo Famulari d8fa9cf7f4
gnu: Add python-imagesize.
* gnu/packages/python.scm (python-imagesize, python2-imagesize): New variables.
2016-07-03 22:24:44 -04:00
ng0 679b535b03
Update name for ng0.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-03 23:48:32 +02:00
David Craven 9b0942c1b0
gnu: Add rng-tools.
* gnu/packages/linux.scm (rng-tools): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-03 17:29:12 -04:00
David Craven 75750abbbc
gnu: Order module imports in (gnu packages linux) alphabetically.
* gnu/packages/linux.scm: Order module imports alphabetically.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-03 17:29:12 -04:00
Troy Sankey a2cb16b0c6
gnu: Add alot.
* gnu/packages/mail.scm (alot): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-03 16:52:19 -04:00
Troy Sankey 47d0b29269
gnu: Add python-urwidtrees.
* gnu/packages/python.scm (python-urwidtrees, python2-urwidtrees):
New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-03 16:52:19 -04:00
Efraim Flashner b58c1b2d9b
gnu: sshfs-fuse: Update to 2.8.
* gnu/packages/linux.scm (sshfs-fuse): Update to 2.8.
2016-07-03 22:09:21 +03:00
Leo Famulari df32099104
gnu: font-gnu-unifont: Update to 9.0.01.
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 9.0.01.
2016-07-03 14:16:48 -04:00
John J Foerch 3fa3151f8c
gnu: conkeror: Update to 1.0.3
* gnu/packages/conkeror.scm (conkeror): Update to 1.0.3.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-07-03 20:30:08 +03:00
Ricardo Wurmus 2bb006121e
gnu: Add Amsynth.
* gnu/packages/music.scm (amsynth): New variable.
2016-07-03 19:02:49 +02:00
Ricardo Wurmus 1095bd1db0
gnu: Add emacs-emms-player-mpv.
* gnu/packages/emacs.scm (emacs-emms-player-mpv): New variable.
2016-07-03 18:31:39 +02:00
Ricardo Wurmus d06d4d7b2a
gnu: emms: Rename package to "emacs-emms".
* gnu/packages/emacs.scm (emms): Rename to "emacs-emms".
2016-07-03 18:31:39 +02:00
Efraim Flashner 0c9df45755
gnu: smalltalk: Don't use bundled libraries.
* gnu/packages/smalltalk.scm (smalltalk)[native-inputs]: Add libffi,
libltdl, libsigsegv, pkg-config.
[home-page]: Update to new home-page.
2016-07-03 14:56:37 +03:00
Efraim Flashner 569d9efe3a
gnu: cgit: Update to 1.0.
* gnu/packages/version-control.scm (cgit): Update to 1.0.
2016-07-03 14:15:08 +03:00
Efraim Flashner 94d8726bfb
gnu: mercurial: Update to 3.8.4.
* gnu/packages/version-control.scm (mercurial): Update to 3.8.4.
2016-07-03 14:08:26 +03:00
Efraim Flashner 4dc9dcc272
gnu: exiv2: Update to 0.25.
* gnu/packages/geeqie.scm (exiv2): Update to 0.25.
[native-inputs]: Add intltool.
2016-07-03 12:55:02 +03:00
Efraim Flashner da6383b3ea
gnu: geeqie: Update to 1.3.
* gnu/packages/geeqie.scm (geeqie): Update to 1.3.
[arguments]: Add autogen phase.
[native-inputs]: Add autoconf, automake, glib.
2016-07-03 12:32:50 +03:00
Efraim Flashner dbd6bc5cc6
gnu: ninja: Update to 1.7.1.
* gnu/packages/ninja.scm (ninja): Update to 1.7.1.
* gnu/packages/patches/ninja-tests.patch: Update patch.
2016-07-03 12:00:25 +03:00
Efraim Flashner fa6a082ea8
gnu: emacs-helm: Update to 1.9.8.
* gnu/packages/emacs.scm (emacs-helm): Update to 1.9.8.
2016-07-03 11:15:15 +03:00
Efraim Flashner 54055e9ff9
gnu: emacs-slime: Update to 2.18.
* gnu/packages/emacs.scm (emacs-slime): Update to 2.18.
2016-07-03 11:12:43 +03:00
Efraim Flashner afb6fdaa5d
gnu: flycheck: Update to 28.
* gnu/packages/emacs.scm (flycheck): Update to 28.
2016-07-03 11:10:28 +03:00
Efraim Flashner 49f54a7454
gnu: openspecfun: Update to 0.5.2.
* gnu/packages/maths.scm (openspecfun): Update to 0.5.2.
2016-07-03 10:14:16 +03:00
Efraim Flashner 26f6e565a9
gnu: openlibm: Update to 0.5.1.
* gnu/packages/maths.scm (openlibm): Update to 0.5.1.
2016-07-03 10:07:17 +03:00
Efraim Flashner d7d7f99c48
gnu: librecad: Update to 2.1.1.
* gnu/packages/engineering.scm (librecad): Update to 2.1.1.
2016-07-03 09:56:45 +03:00
Efraim Flashner 0562a81eae
gnu: pugixml: Update to 1.7.
* gnu/packages/xml.scm (pugixml): Update to 1.7.
2016-07-03 08:28:51 +03:00
Efraim Flashner c17489124e
gnu: libetpan: Update to 1.7.2.
* gnu/packages/mail.scm (libetpan): Update to 1.7.2.
[inputs]: Add zlib.
2016-07-03 07:21:56 +03:00
Efraim Flashner 6a628e8ba7
gnu: openimageio: Update to 1.6.15.
* gnu/packages/graphics.scm (openimageio): Update to 1.6.15.
[source]: Remove patch.
* gnu/packages/patches/openimageio-boost-1.60.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-07-03 06:44:49 +03:00
Efraim Flashner 0a7fc756fe
gnu: cgal: Update to 4.8.1.
* gnu/packages/graphics.scm (cgal): Update to 4.8.1.
[source]: Release tarballs now at Github.
2016-07-03 03:28:03 +03:00
Efraim Flashner fbb060fec8
gnu: ffmpeg-2.8: Update to 2.8.7.
* gnu/packages/video.scm (ffmpeg): Update to 2.8.7.
2016-07-03 00:40:24 +03:00
Efraim Flashner cb764dc838
gnu: xorriso: Update to 1.4.4.
* gnu/packages/cdrom.scm (xorriso): Update to 1.4.4.
[home-page]: Use https.
2016-07-03 00:39:21 +03:00
Efraim Flashner 8ffa5a5798
gnu: ffmpeg: Update to 3.1.1.
* gnu/packages/video.scm (ffmpeg): Update to 3.1.1.
2016-07-02 23:14:06 +03:00
Efraim Flashner c5795adf61
gnu: enlightenment: Update to 0.21.0.
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.21.0.
2016-07-02 22:15:32 +03:00
Alex Sassmannshausen abf18075ca
gnu: Add perl-ipc-system-simple.
* gnu/packages/perl.scm (perl-ipc-system-simple): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-02 16:24:35 +02:00
Alex Sassmannshausen 2dca669e45
gnu: Add perl-guard.
* gnu/packages/perl.scm (perl-guard): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-02 16:24:35 +02:00
Alex Sassmannshausen 7640c62dd2
gnu: Add perl-file-zglob.
* gnu/packages/perl.scm (perl-file-zglob): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-02 16:24:35 +02:00
Alex Sassmannshausen d209710bd4
gnu: Add perl-config-ini.
* gnu/packages/perl.scm (perl-config-ini): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-02 16:24:35 +02:00
Alex Sassmannshausen 4ca06e4c87
gnu: Add perl-mixin-linewise.
* gnu/packages/perl.scm (perl-mixin-linewise): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-02 16:24:35 +02:00
Alex Sassmannshausen 77ff12c987
gnu: Add perl-perlio-utf8-strict.
* gnu/packages/perl.scm (perl-perlio-utf8_strict): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-02 16:24:35 +02:00
Alex Sassmannshausen a65d0fdb7c
gnu: Add perl-test-class-most.
* gnu/packages/perl.scm (perl-test-class-most): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-02 16:24:35 +02:00
Alex Sassmannshausen d2d6cd67c2
gnu: Add perl-test-class.
* gnu/packages/perl.scm (perl-test-class): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-02 16:24:35 +02:00
Alex Sassmannshausen e957060ccb
gnu: perl-text-diff: Update perl-text-diff.
* gnu/packages/perl.scm (perl-text-diff): Correct URL, update to 1.44.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-02 16:24:35 +02:00
John J. Foerch 6d3ef286b1
gnu: Add midicsv.
* gnu/packages/music.scm (midicsv): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-02 16:24:35 +02:00
Leo Famulari 9996ab16e6
gnu: gimp: Fix CVE-2016-4994.
* gnu/packages/patches/gimp-CVE-2016-4994.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gimp.scm (gimp): Use it.
2016-07-02 10:13:55 -04:00
Ludovic Courtès a4bbf41b25
tests: install: Adjust to new 'marionette-service-type' interface.
This is a followup to 037f9e07cd.
Reported by Mark H Weaver.

* gnu/tests/install.scm (%minimal-os): Pass a <marionette-configuration>
object as the value for the MARIONETTE-SERVICE-TYPE.
2016-07-02 14:59:30 +02:00
宋文武 2d02a7789a
gnu: mozjs-24: Disable parallel build.
* gnu/packages/gnuzilla.scm (mozjs-24)[arguments]: Add
'#:parallel-build? #f'.
2016-07-02 10:43:45 +08:00
Leo Famulari 328ae34112
gnu: python-sphinx-repoze-autointerface: Update to 0.8.
* gnu/packages/python.scm (python-sphinx-repoze-autointerface,
python2-sphinx-repoze-autointerface): Update to 0.8.
2016-07-01 20:55:53 -04:00
Leo Famulari 07abcc2e73
gnu: imagemagick: Update to 6.9.5-0.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.5-0.
2016-07-01 20:27:09 -04:00
Leo Famulari 9c509ca9a6
gnu: python-cryptography, python-cryptography-vectors: Update to 1.3.4.
* gnu/packages/python.scm (python-cryptography, python2-cryptography):
Update to 1.3.4.
[source]: Use pypi-uri.
(python-cryptography-vectors, python2-cryptography-vectors): Update to 1.3.4.
[source]: Use pypi-uri.
2016-07-01 20:23:07 -04:00
Leo Famulari 187e9094f7
Revert "gnu: wrap-python3: Create more symlinks."
This reverts commit 478e75b53b.
2016-07-01 17:03:36 -04:00
Efraim Flashner d5da7ee418
gnu: rofi: Update to 1.1.0.
* gnu/packages/xdisorg.scm (rofi): Update to 1.1.0.
2016-07-01 17:30:16 +03:00
Efraim Flashner 5bf834225a
gnu: libreoffice: Update to 5.1.4.2 [fixes CVE-2016-4324].
* gnu/packages/libreoffice.scm (libreoffice): Update to 5.1.4.2.
[native-inputs]: Switch python to python-wrapper.
[arguments]: Add '--without-doxygen' and '--disable-gtk3'.
2016-07-01 15:53:08 +03:00
Efraim Flashner 2638ec61e0
gnu: orcus: Update to 0.9.2.
* gnu/packages/libreoffice.scm (orcus): Update to 0.9.2.
2016-07-01 15:51:32 +03:00
Ben Woodcroft 71830f0e49
gnu: vsearch: Update to 2.0.1.
*  gnu/packages/bioinformatics.scm (vsearch): Update to 2.0.1.
2016-07-01 09:01:28 +10:00
Ben Woodcroft c7f04517a6
gnu: Add r-glmnet.
* gnu/packages/statistics.scm (r-glmnet): New variable.
2016-07-01 09:01:20 +10:00
Efraim Flashner 84d08af653
gnu: busybox: Use 'modify-phases'.
* gnu/packages/busybox.scm (busybox)[arguments]: Use 'modify-phases'.
2016-06-30 19:11:45 +03:00
Efraim Flashner 2e5505e5ea
gnu: busybox: Update to 1.25.0.
* gnu/packages/busybox.scm (busybox): Update to 1.25.0.
[native-inputs]: Add which.
2016-06-30 19:11:27 +03:00
Ludovic Courtès d2375c4330
gnu: mit-krb5: Disable tests on all 32-bit platforms.
* gnu/packages/mit-krb5.scm (mit-krb5)[arguments]: Change #:tests? to
true only on x86_64-linux.
2016-06-30 10:47:24 +02:00
Efraim Flashner 5fc4df0cb5
gnu: owncloud-client: Remove some bundled libs.
* gnu/packages/owncloud.scm (owncloud-client)[source]: Add a snippet
removing some of the 3rd party projects.
2016-06-30 10:56:57 +03:00
Efraim Flashner 9b1c1ea129
gnu: owncloud-client: Update to 2.2.2.
* gnu/packages/owncloud.scm (owncloud-client): Update to 2.2.2.
2016-06-30 09:55:18 +03:00
Danny Milosavljevic f4155188c3
gnu: Add python-prompt-toolkit.
* gnu/packages/python.scm (python-prompt-toolkit, python2-prompt-toolkit):
New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-06-29 22:31:05 -04:00
Leo Famulari e4875826d8
gnu: python-wcwidth: Add missing 'properties' field.
This is a followup to commit a44fd439dc.

* gnu/packages/python.scm (python-wcwidth)[properties]: New field.
2016-06-29 22:25:44 -04:00
Ludovic Courtès 468e0b18d1
gnu: ceres-solver: Propagate GLOG.
* gnu/packages/maths.scm (ceres)[inputs]: Move GLOG to...
[propagated-inputs]: ... here.  New field.
2016-06-29 16:08:46 +02:00
Jan Nieuwenhuizen ad85791265
gnu: linux-initrd: Support NVMe devices.
* gnu/system/linux-initrd.scm (base-initrd): Add nvme to linux-modules.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-06-29 16:08:46 +02:00
Ben Woodcroft 8dec2229a2
gnu: blast+: Update to 2.4.0.
* gnu/packages/bioinformatics.scm (blast+): Update to 2.4.0.
2016-06-29 22:42:47 +10:00
Ludovic Courtès bc3a2e3503
gnu: ceres-solver: Depend on glog.
* gnu/packages/maths.scm (ceres)[arguments]: Remove -DMINIGLOG=ON.
[inputs]: Add GLOG.
2016-06-29 12:01:05 +02:00
Ludovic Courtès 53d159f843
gnu: Add glog.
* gnu/packages/logging.scm (glog): New variable.
2016-06-29 11:13:03 +02:00
Ludovic Courtès 2de091f0c8
gnu: node: Make sure 'npm' remains a symlink after 'patch-shebangs'.
Fixes <http://bugs.gnu.org/23744>.
Reported by Jovany Leandro G.C <bit4bit@riseup.net>
and Jelle Licht <jlicht@fsfe.org>.

* gnu/packages/node.scm (node)[arguments]: Replace 'patch-shebangs'
phase.
2016-06-29 10:06:18 +02:00
Ludovic Courtès c2c36f5fab
gnu: openexr: Install 'ImfStdIO.h'.
* gnu/packages/graphics.scm (openexr)[source](snippet): Modify
IlmImf/Makefile.in so that it installs 'ImfStdIO.h'.
2016-06-29 10:06:18 +02:00
Ricardo Wurmus b0069a6777
gnu: avrdude: Use libusb-compat.
* gnu/packages/patches/avrdude-fix-libusb.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/flashing-tools.scm (avrdude)[source]: Remove patch.
[inputs]: Replace "libusb" with "libusb-compat".
2016-06-29 07:15:33 +02:00
Ben Woodcroft 3bce0f14b2
gnu: star: Update to 2.5.2a.
* gnu/packages/bioinformatics.scm (star): Update to 2.5.2a.
2016-06-29 10:14:22 +10:00
Ben Woodcroft 6c737963f6
gnu: htslib: Update to 1.3.1.
* gnu/packages/bioinformatics.scm (htslib): Update to 1.3.1.
2016-06-29 10:14:22 +10:00
Ricardo Wurmus ec9466388e
gnu: Add SEEK.
* gnu/packages/bioinformatics.scm (seek): New variable.
2016-06-28 22:49:05 +02:00
Ludovic Courtès d9ecec9b87
gnu: mit-krb5: Disable tests on i686.
* gnu/packages/mit-krb5.scm (mit-krb5)[arguments]: Add #:tests?.
2016-06-28 14:21:09 +02:00
Ben Woodcroft d6e374a0d9
gnu: mafft: Update to 7.299.
* gnu/packages/bioinformatics.scm (mafft): Update to 7.299.
2016-06-28 21:42:15 +10:00
Efraim Flashner 48d4ce6ea3
Revert "gnu: qtbase: Don't propagate mesa."
This reverts commit 763a8e6e23.
2016-06-28 14:33:37 +03:00
Ben Woodcroft 45469ebe52
gnu: metabat: Update to 0.26.3.
* gnu/packages/bioinformatics.scm (metabat): Update to 0.26.3.
[arguments]: Update include and linking paths accordingly.
2016-06-28 21:28:06 +10:00
Ben Woodcroft af45244e36
gnu: diamond: Update to 0.8.9.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.9.
2016-06-28 19:31:25 +10:00
Ricardo Wurmus 05e9f30f1e
gnu: r: Add pango to inputs.
* gnu/packages/statistics.scm (r)[inputs]: Remove cairo, add pango.
2016-06-28 09:36:00 +02:00
Ricardo Wurmus de1b319dbf
gnu: pulseaudio: Enable support for Bluetooth.
* gnu/packages/pulseaudio.scm (pulseaudio)[arguments]: Add
"--enable-bluez5" to configure flags.
[inputs]: Add "bluez" and "sbc".
2016-06-28 08:35:39 +02:00
Ludovic Courtès d2fa61bc35
tests: Add Avahi and NSS-mDNS test.
* gnu/tests/base.scm (%avahi-os): New variable.
(run-nss-mdns-test): New procedure.
(%test-nss-mdns): New variable.
2016-06-27 21:41:38 +02:00
Ludovic Courtès c8695f325d
services: avahi: Add #:debug? parameter.
* gnu/services/avahi.scm (<avahi-configuration>)[debug?]: New field.
(avahi-shepherd-service): Honor it.
(avahi-service): Add #:debug? and honor it.
* doc/guix.texi (Networking Services): Adjust accordingly.
2016-06-27 21:41:38 +02:00
Ludovic Courtès 194ccecf77
services: avahi: Pass --daemonize and check for the PID file.
This makes sure the service's 'start' finishes when avahi-daemon is
ready to process requests.

* gnu/services/avahi.scm (avahi-shepherd-service): Use --daemonize
instead of --syslog and add #:pid-file.
2016-06-27 21:41:38 +02:00
Ludovic Courtès 037f9e07cd
tests: 'marionette-service-type' nows takes a <marionette-configuration>.
* gnu/tests.scm (<marionette-configuration>): New record type.
(marionette-shepherd-service): Argument now is a <marionette-configuration>.
(marionette-operating-system): Adjust accordingly.  Add #:requirements
parameter and honor it.
2016-06-27 21:41:38 +02:00
Ludovic Courtès 858d372c98
tests: base: Add host name resolution tests.
* gnu/tests/base.scm (run-basic-test)["host name resolution",
"host not found"]: New tests.
2016-06-27 21:41:38 +02:00
Ludovic Courtès 9009538d84
services: Export more service types.
* gnu/services/base.scm (syslog-service-type): Export.
(urandom-seed-service-type): Export.
2016-06-27 21:41:38 +02:00
Ludovic Courtès 04101d99ee
services: nscd: Wait for the PID file.
* gnu/services/base.scm (nscd-shepherd-service): Pass #:pid-file.
2016-06-27 21:41:38 +02:00
Kei Kebreau aea7d1d516
gnu: Add orage.
* gnu/packages/xfce.scm (orage): New variable.
2016-06-27 12:58:06 -04:00
宋文武 06961617a1
gnu: python2-orator: Rearrange inputs.
* gnu/packages/python.scm (python2-orator)[native-inputs]: Move
python2-ipaddress ...
[propagated-inputs]: to here.
2016-06-27 22:17:21 +08:00
宋文武 b26760302a
gnu: python-orator: Rearrange inputs.
* gnu/packages/python.scm (python-orator)[native-inputs]: Move
python-arrow, python-blinker, python-cleo, python-fake-factory,
python-inflection, python-lazy-object-proxy, python-pyaml,
python-simplejson, python-wrapt ...
[propagated-inputs]: to here.
2016-06-27 22:17:21 +08:00
宋文武 24c9aa1810
gnu: python2-fake-factory: Rearrange inputs.
* gnu/packages/python.scm (python2-fake-factory)[native-inputs]: Move
python2-ipaddress ...
[propagated-inputs]: to here.
2016-06-27 22:17:21 +08:00
宋文武 bbcd729791
gnu: python-fake-factory: Rearrange inputs.
* gnu/packages/python.scm (python-fake-factory)[native-inputs]: Move
python-dateutil-2, python-six ...
[propagated-inputs]: to here.
2016-06-27 22:17:21 +08:00
宋文武 d42560bdfa
gnu: python-email-validator: Rearrange inputs.
* gnu/packages/python.scm (python-email-validator)[native-inputs]: Move
python-dnspython, python-idna ...
[propagated-inputs]: to here.
2016-06-27 22:17:21 +08:00
宋文武 9403150a96
gnu: python-cleo: Rearrange inputs.
* gnu/packages/python.scm (python-cleo)[native-inputs]: Move
python-psutil, python-pylev ...
[propagated-inputs]: to here.
2016-06-27 22:17:21 +08:00
宋文武 36aed73648
gnu: python-arrow: Rearrange inputs.
* gnu/packages/python.scm (python-arrow)[native-inputs]: Move
python-dateutil-2 ...
[propagated-inputs]: to here.
2016-06-27 22:17:21 +08:00
宋文武 c8fa3d9b73
gnu: python-pykafka: Rearrange inputs.
* gnu/packages/python.scm (python-pykafka)[native-inputs]: Move
python-gevent, python-kazoo, python-tabulate ...
[propagated-inputs]: to here.
2016-06-27 22:17:21 +08:00
宋文武 c18899e8cf
gnu: python-kazoo: Rearrange inputs.
* gnu/packages/python.scm (python-kazoo)[native-inputs]: Move
six ...
[propagated-inputs]: to here.
2016-06-27 22:17:21 +08:00
宋文武 4591217058
gnu: python-twisted: Rearrange inputs.
* gnu/packages/python.scm (python-twisted)[native-inputs]: Move
python-zope-interface ...
[propagated-inputs]: to here.
2016-06-27 22:17:21 +08:00
Matthew Jordan 7a2941a83e
gnu: Add Go 1.4.
* gnu/local.mk: Modified file.
* gnu/packages/golang.scm: New file.

Co-authored-by: Efraim Flashner <efraim@flashner.co.il>
Co-authored-by: Andy Wingo <wingo@igalia.com>
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-06-27 14:09:10 +02:00
Ben Woodcroft 94ff31572d
gnu: Add khmer.
* gnu/packages/bioinformatics.scm (khmer): New variable.
* gnu/packages/patches/khmer-use-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-06-27 21:35:16 +10:00
Ben Woodcroft 9ded145717
gnu: Add python-screed.
* gnu/packages/bioinformatics.scm (python-screed, python2-screed):
New variables.
2016-06-27 21:16:39 +10:00
Ludovic Courtès 8601feaea6
gnu: git: Fix builds with Make 4.2.
* gnu/packages/version-control.scm (git)[arguments]: Add 'add-PM.stamp'
phase.
2016-06-27 09:50:56 +02:00
Ludovic Courtès 98378db6ba
gnu: git: Use 'modify-phases'.
* gnu/packages/version-control.scm (git)[arguments]: Use
'modify-phases'.
2016-06-27 09:42:06 +02:00
Ludovic Courtès 01497dfe6c
Merge branch 'master' into core-updates 2016-06-27 09:30:01 +02:00
Efraim Flashner 095b7fea44
gnu: qttools: Update to 5.6.1-1.
* gnu/packages/qt.scm (qttools): Update to 5.6.1-1.
2016-06-27 05:25:32 +03:00
Efraim Flashner 677b98ae68
gnu: qtlocation: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtlocation): Update to 5.6.1-1.
2016-06-27 05:25:30 +03:00
Efraim Flashner a2a256562f
gnu: qtwebchannel: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtwebchannel): Update to 5.6.1-1.
2016-06-27 05:25:27 +03:00
Efraim Flashner 33741e16f4
gnu: qtserialport: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtserialport): Update to 5.6.1-1.
[inputs]: Add eudev.
2016-06-27 05:25:10 +03:00
Efraim Flashner 66f26a35f1
gnu: qtwayland: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtwayland): Update to 5.6.1-1.
2016-06-27 05:25:05 +03:00
Efraim Flashner 99f6f56f4f
gnu: qtmultimedia: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtmultimedia): Update to 5.6.1-1.
2016-06-27 05:25:02 +03:00
Efraim Flashner 2743daffab
gnu: qtsensors: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtsensors): Update to 5.6.1-1.
2016-06-27 05:25:00 +03:00
Efraim Flashner fb767debee
gnu: qtwebsockets: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtwebsockets): Update to 5.6.1-1.
2016-06-27 05:24:58 +03:00
Efraim Flashner 4254b206b4
gnu: qtconnectivity: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtconnectivity): Update to 5.6.1-1.
2016-06-27 05:24:56 +03:00
Efraim Flashner f3a3210cfd
gnu: qtdeclarative: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtdeclarative): Update to 5.6.1-1.
2016-06-27 05:24:53 +03:00
Efraim Flashner d547a1970d
gnu: qtxmlpatterns: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtxmlpatterns): Update to 5.6.1-1.
2016-06-27 05:24:51 +03:00
Efraim Flashner 0835e22816
gnu: qtx11extras: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtx11extras): Update to 5.6.1-1.
2016-06-27 05:24:49 +03:00
Efraim Flashner 1c16029b7f
gnu: qtimageformats: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtimageformats): Update to 5.6.1-1.
2016-06-27 05:24:46 +03:00
Efraim Flashner 7de7d8a639
gnu: qtsvg: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtsvg): Update to 5.6.1-1.
2016-06-27 05:24:44 +03:00
Efraim Flashner c7386f4e0c
gnu: qtbase: Update to 5.6.1-1.
* gnu/packages/qt.scm (qtbase): Update to 5.6.1-1.
2016-06-27 05:24:42 +03:00
Efraim Flashner f66970a7ed
gnu: qtbase: Add eudev and libinput support.
* gnu/packages/qt.scm (qtbase)[inputs]: Add eudev, libinput.
2016-06-27 05:24:40 +03:00
Efraim Flashner 763a8e6e23
gnu: qtbase: Don't propagate mesa.
* gnu/packages/qt.scm (qtbase)[propagated-inputs]: Move mesa ...
[inputs]: ... to here.
(qtsvg)[propagated-inputs]: No need to clear propagated-inputs.
2016-06-27 05:24:33 +03:00
David Craven 9dd674db01
daemon: Rename 'NIX_CONF_DIR' to 'GUIX_CONFIGURATION_DIRECTORY'.
Partly fixes <http://bugs.gnu.org/22459>.
Reported by Jeff Mickey <j@codemac.net> and David Craven <david@craven.ch>.

* nix/libstore/globals.cc (Settings::processEnvironment()): Change
'NIX_CONF_DIR' to 'GUIX_CONFIGURATION_DIRECTORY'.
* nix/local.mk (libstore_a_CPPFLAGS): Likewise.
* guix/config.scm.in (%config-directory): Likewise.
* build-aux/test-env.in: Likewise.
* gnu/packages/patches/hydra-automake-1.15.patch: Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-06-26 23:11:07 +02:00
宋文武 4b67053962
gnu: Add starfighter.
* gnu/packages/games.scm (starfighter): New variable.
2016-06-26 20:31:55 +08:00
Efraim Flashner 66fd9858f3
gnu: mpv: Update to 0.18.0.
* gnu/packages/video.scm (mpv): Update to 0.18.0.
[arguments]: Remove disabled '--enable-gpl3' configure flag.
2016-06-26 07:21:07 +03:00
Ben Woodcroft c2e575185b
gnu: vsearch: Update to 2.0.0.
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.0.0.
2016-06-26 12:43:39 +10:00
Mark H Weaver 36c6919c93
gnu: linux-libre: Update to 4.6.3.
* gnu/packages/linux.scm (linux-libre): Update to 4.6.3.
2016-06-25 13:13:36 -04:00
Mark H Weaver 18c658f966
gnu: linux-libre-4.4: Update to 4.4.14.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.14.
2016-06-25 13:12:12 -04:00
Lukas Gradl 893d963ae3
gnu: Add opendht.
* gnu/packages/crypto.scm (opendht): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-06-25 11:28:53 -04:00
Lukas Gradl d1ef573dec
gnu: Add msgpack.
* gnu/packages/serialization.scm (msgpack): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-06-25 11:28:53 -04:00
宋文武 5a7441910d
gnu: Add python-orator and python2-orator.
* gnu/packages/python.scm (python-orator, python2-orator): New variables.
2016-06-25 22:52:57 +08:00
宋文武 347175a27c
gnu: Add python-flexmock and python2-flexmock.
* gnu/packages/python.scm (python-flexmock, python2-flexmock): New variables.
2016-06-25 22:52:57 +08:00
宋文武 b49504fd8c
gnu: Add python-pyaml and python2-pyaml.
* gnu/packages/python.scm (python-pyaml, python2-pyaml): New variables.
2016-06-25 22:52:57 +08:00
宋文武 ea92ae01c2
gnu: Add python-fake-factory and python2-fake-factory.
* gnu/packages/python.scm (python-fake-factory, python2-fake-factory):
New variables.
2016-06-25 20:49:59 +08:00
宋文武 8987d91e7f
gnu: Add python-ukpostcodeparser and python2-ukpostcodeparser.
* gnu/packages/python.scm (python-ukpostcodeparser)
(python2-ukpostcodeparser): New variables.
2016-06-25 20:49:59 +08:00
宋文武 22711e2585
gnu: Add python-email-validator and python2-email-validator.
* gnu/packages/python.scm (python-email-validator)
(python2-email-validator): New variables.
2016-06-25 20:49:59 +08:00
宋文武 5477e05f01
gnu: Add python-dnspython and python2-dnspython.
* gnu/packages/python.scm (python-dnspython, python2-dnspython):
New variables.
2016-06-25 20:49:59 +08:00
宋文武 77cadb436b
gnu: Add python-lazy-object-proxy and python2-lazy-object-proxy.
* gnu/packages/python.scm (python-lazy-object-proxy)
(python2-lazy-object-proxy): New variables.
2016-06-25 20:49:59 +08:00
宋文武 f5deff7a03
gnu: Add python-cleo and python2-cleo.
* gnu/packages/python.scm (python-cleo, python2-cleo): New variables.
2016-06-25 20:49:59 +08:00
宋文武 1899556655
gnu: Add python-pylev and python2-pylev.
* gnu/packages/python.scm (python-pylev, python2-pylev): New variables.
2016-06-25 20:49:59 +08:00
宋文武 1f2b62a4fa
gnu: Add python-inflection and python2-inflection.
* gnu/packages/python.scm (python-inflection, python2-inflection):
New variables.
2016-06-25 20:49:59 +08:00
宋文武 ae43baa890
gnu: Add python-arrow and python2-arrow.
* gnu/packages/python.scm (python-arrow, python2-arrow): New variables.
2016-06-25 20:49:59 +08:00
宋文武 9250b0f3bf
gnu: Add python-chai and python2-chai.
* gnu/packages/python.scm (python-chai, python2-chai): New variables.
2016-06-25 20:49:59 +08:00
宋文武 8ea8e8d3c3
guix: python-build-system: Change pypi-uri to use https://pypi.io.
* guix/build-system/python.scm (pypi-uri): Use https://pypi.io.
* gnu/packages/python.scm (python-twisted)[uri]: Remove https://pypi.io.
2016-06-25 20:49:59 +08:00
Mark H Weaver 9f25019095
gnu: linux-libre-4.1: Update to 4.1.27.
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.27.
2016-06-24 18:33:50 -04:00
Ludovic Courtès 74c8b174e8
gnu: Adjust to PCRE split.
This is a followup to commit 6d49ca3bad.

* gnu/packages/databases.scm (4store)[inputs]: Remove PCRE.
[native-inputs]: Add PCRE:bin.
* gnu/packages/web.scm (httpd): Likewise.
2016-06-24 23:55:28 +02:00
Steve Sprang 3c6e42b3bc
gnu: Add erlang.
* gnu/packages/erlang.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Co-authored by: Leo Famulari <leo@famulari.name>
Co-authored by: Pjotr Prins <pjotr.public12@thebird.nl>
2016-06-24 10:45:26 -04:00
Andreas Enge b8a680f778
gnu: java-swt: Update to 4.6.
* gnu/packages/java.scm (java-swt): Update to 4.6.
2016-06-24 16:21:54 +02:00
Andreas Enge c19a61bb3e
gnu: pari-gp: Update to 2.7.6.
* gnu/packages/algebra.scm (pari-gp): Update to 2.7.6.
2016-06-24 13:56:07 +02:00
Ludovic Courtès a9fbe94edc
gnu: Add emacs-writegood-mode.
* gnu/packages/emacs.scm (emacs-writegood-mode): New variable.
2016-06-24 09:01:22 +02:00
Ludovic Courtès af4569095f
gnu: Add GNU Diction.
* gnu/packages/dictionaries.scm (diction): New variable.
2016-06-24 09:01:22 +02:00
Leo Famulari 11f2582b81
gnu: imagemagick: Update to 6.9.4-10.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.4.10.
2016-06-24 00:51:14 -04:00
Ludovic Courtès 125af57e09
tests: basic: Don't hard-code the expected architecture name.
* gnu/tests/base.scm (run-basic-test)["uname"]: Don't hard-code the
architecture.
2016-06-23 00:50:24 +02:00
Ludovic Courtès f6d5456b1b
tests: Installation test no longer requires KVM.
* gnu/tests/install.scm (%test-installed-os): Use '-enable-kvm' only
when /dev/kvm exists.
2016-06-23 00:12:13 +02:00
Ludovic Courtès c311089b0b
services: Add 'mcron-service'.
* gnu/services/mcron.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/tests/base.scm (%mcron-os, %test-mcron): New variables.
(run-mcron-test): New procedure.
* doc/guix.texi (Scheduled Job Execution): New node.
2016-06-22 22:56:06 +02:00
Ludovic Courtès 159daace2f
gnu: Add mcron2.
* gnu/packages/guile.scm (mcron2): New variable.
2016-06-22 22:56:06 +02:00
ng0 c5eef242ce
gnu: xorg.scm: Replace http with https in URLs.
* gnu/packages/xorg.scm: Use https for cgit.freedesktop.org,
www.x.org/wiki/, anongit.freedesktop.org.
2016-06-22 21:59:55 +03:00
ng0 612fddec34
gnu: haskell.scm: Replace http with https in Hackage, Github.
* gnu/packages/haskell.scm: Use https for Hackage, Github urls.
2016-06-22 21:59:44 +03:00
Efraim Flashner 7cc2e1e7e6
gnu: efl: Update to 1.17.2.
* gnu/packages/enlightenment.scm (efl): Update to 1.17.2.
2016-06-22 17:42:38 +03:00
Alex Kost da0cef6a2d
gnu: lightning: Fix typo.
This is a followup to commit c283b22e93.

* gnu/packages/assembly.scm (lightning): Add 'license' prefix.
2016-06-22 11:43:41 +03:00
ng0 384bc22ad8
gnu: perl-test-harness: Update to 3.36.
* gnu/packages/perl.scm (perl-test-harness): Update to 3.36.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-06-22 11:34:04 +03:00
Alex Kost c283b22e93
gnu: lightning: Move to (gnu packages assembly).
* gnu/packages/lightning.scm: Remove.  Move 'lightning' to...
* gnu/packages/assembly.scm (lightning): ... here.  New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
2016-06-22 11:16:05 +03:00
Leo Famulari b3470031df
gnu: beets: Move propagated-inputs to inputs.
* gnu/packages/music.scm (beets)[propagated-inputs]: Replace with ...
[inputs]: ... new field.
2016-06-22 02:38:46 -04:00
Leo Famulari 88c8d72f3c
gnu: beets: Update to 1.3.18.
* gnu/packages/patches/beets-image-test-failure.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/music.scm (beets): Update to 1.3.18.
[source]: Use patch.
2016-06-22 02:38:46 -04:00
Efraim Flashner a12f6f498a
gnu: cmake: Update to 3.5.2.
* gnu/packages/cmake.scm (cmake): Update to 3.5.2.
2016-06-22 06:51:53 +03:00
Efraim Flashner 6e261af1e7
gnu: cmake: Use 'modify-phases'.
* gnu/packages/cmake.scm (cmake)[arguments]: Use 'modify-phases'.
2016-06-22 06:51:53 +03:00
Efraim Flashner 28b49c0791
gnu: cmake: Disable checking for libarchive in tests.
* gnu/packages/cmake.scm (cmake)[arguments]: Remove check on libarchive.
2016-06-22 06:51:47 +03:00
Ben Woodcroft 69af462496
gnu: vsearch: Update to 0.11.2.
* gnu/packages/bioinformatics.scm (vsearch): Update to 0.11.2.
2016-06-22 07:51:12 +10:00
Jan Nieuwenhuizen a837997cab
gnu: nasm: Make build bit-reproducible.
* gnu/packages/patches/nasm-no-ps-pdf.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/assembly.scm (nasm): Use it.  Remove ghostscript, do not
build PS or PDF docs.  Makes build bit-reproducible.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-06-21 23:14:05 +02:00
Efraim Flashner 09cbd53c5f
gnu: libarchive: Update to 3.2.1.
* gnu/packages/backup.scm (libarchive): Update to 3.2.1.
[arguments]: Build with '-std=C99'.
2016-06-21 21:36:12 +03:00
Ben Woodcroft 9270298f75
gnu: Add ruby-puma.
gnu/packages/ruby.scm (ruby-puma): New variable.
gnu/packages/patches/ruby-puma-ignore-broken-test.patch: New file.
gnu/local.mk (dist_patch_DATA): Add it.
2016-06-21 21:46:45 +10:00
Ben Woodcroft b08134907d
gnu: Add ruby-hoe-git.
* gnu/packages/ruby.scm (ruby-hoe-git): New variable.
2016-06-21 21:46:45 +10:00
Ben Woodcroft 7b3df1e56e
gnu: Add r-vegan.
* gnu/packages/bioinformatics.scm (r-vegan): New variable.
2016-06-21 21:29:17 +10:00
Ben Woodcroft 0846620803
gnu: Add r-mgcv.
* gnu/packages/statistics.scm (r-mgcv): New variable.
2016-06-21 21:29:17 +10:00
Ben Woodcroft de682e6f0f
gnu: Add r-permute.
* gnu/packages/statistics.scm (r-permute): New variable.
2016-06-21 21:29:17 +10:00
Efraim Flashner 7a15a68f75
gnu: texlive: Update to 2016.
* gnu/packages/tex.scm (texlive-extra-src, texlive-texmf-src,
texlive-bin, texlive-texmf, texlive): Update to 2016.
(texlive-texmf)[properies]: Add max-silent-time so grafts don't time out.
2016-06-21 13:49:20 +03:00
Ludovic Courtès 09b87aff46
gnu: Adjust to yasm change of module.
This is a followup to 15a3fffc59.

* gnu/packages/gnuzilla.scm,
gnu/packages/gstreamer.scm, gnu/packages/kodi.scm,
gnu/packages/video.scm: Adjust import list to yasm move.
2016-06-21 12:27:50 +02:00
Ludovic Courtès 15a3fffc59
gnu: yasm: Move to (gnu packages assembly).
* gnu/packages/yasm.scm: Remove.  Move 'yasm' to...
* gnu/packages/assembly.scm (yasm): ... here.  New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
2016-06-21 12:25:56 +02:00
Jan Nieuwenhuizen 8472bdecb6
gnu: Add nasm.
* gnu/packages/assembly.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-06-21 12:23:34 +02:00
Ludovic Courtès bae90dc7e7
install: Pass a relative file name to 'local-file'.
This is a followup to cbbbb7be0f.

* gnu/system/install.scm (/etc/configuration-files): Pass a relative
file name to 'local-file'.
2016-06-21 12:23:34 +02:00
Ben Woodcroft cec2653bb4
gnu: diamond: Update to 0.8.7.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.7.
2016-06-21 20:00:38 +10:00
Eric Bavier 2f046a0d7e
gnu: Update american-fuzzy-lop to 2.15b.
* gnu/packages/debug.scm (american-fuzzy-lop): Update to 2.15b.
2016-06-21 00:02:02 -05:00
Eric Bavier 0405e5f491
gnu: Add thefuck.
* gnu/packages/admin.scm (thefuck): New variable.
2016-06-20 23:54:20 -05:00
Eric Bavier 7108425c37
gnu: shotwell: Update to 0.23.1.
Addresses DWF-2016-89001: validate TLS certificates.

* gnu/packages/gnome.scm (shotwell): Update to 0.23.1.
[inputs]: replace webkitgtk-2.4 with webkitgtk.
2016-06-20 23:43:37 -05:00
Leo Famulari 909fbd2bf0
gnu: python-wsgi-intercept: Update to 1.2.2.
* gnu/packages/python.scm (python-wsgi-intercept, python2-wsgi-intercept):
Update to 1.2.2.
2016-06-20 18:51:44 -04:00
Leo Famulari c02af1c82a
gnu: python-requests-toolbelt: Update to 0.6.2.
* gnu/packages/python.scm (python-requests-toolbelt,
python2-requests-toolbelt): Update to 0.6.2.
2016-06-20 18:51:44 -04:00
Leo Famulari 0b942744eb
gnu: vdirsyncer: Update to 0.11.2.
* gnu/packages/dav.scm (vdirsyncer): Update to 0.11.2.
2016-06-20 18:51:44 -04:00
Leo Famulari 3d2e0dbcea
gnu: python-click-threading: Update to 0.2.0.
* gnu/packages/python.scm (python-click-threading, python2-click-threading):
Update to 0.2.0.
2016-06-20 18:51:44 -04:00
Leo Famulari 43accb58f9
gnu: python-click: Update to 6.6.
* gnu/packages/python.scm (python-click, python2-click): Update to 6.6.
2016-06-20 18:51:43 -04:00
Kei Kebreau f317aeb438
gnu: Add warzone2100.
* gnu/packages/games.scm (warzone2100): New variable.
2016-06-20 18:49:11 -04:00
Ludovic Courtès 98b65b5ff6
tests: Add a mechanism to describe and discover system tests.
* gnu/tests.scm (<system-test>): New record type.
(write-system-test, test-modules, fold-system-tests)
(all-system-tests): New procedures.
* gnu/tests/base.scm (%test-basic-os): Turn into a <system-test>.
* gnu/tests/install.scm (%test-installed-os): Likewise.
* build-aux/run-system-tests.scm (%system-tests): Remove.
(run-system-tests): Use 'all-system-tests'.
2016-06-20 23:50:46 +02:00
Ludovic Courtès 2a6ba87086
packages: Export 'scheme-modules'.
* gnu/packages.scm (package-modules): Rename to...
(scheme-modules): ... this.  Export.  Update callers.
2016-06-20 23:50:46 +02:00
Ludovic Courtès 94b4274d0d
tests: Add system installation test.
* gnu/tests.scm (define-os-with-source): New macro.
* gnu/tests/install.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* build-aux/run-system-tests.scm (%system-tests): Likewise.
2016-06-20 23:50:46 +02:00
Ludovic Courtès b1dd6ac55d
vm: 'qemu-command' honors its argument.
* gnu/build/vm.scm (qemu-command): Refer to SYSTEM rather than
%HOST-TYPE in the body.
2016-06-20 23:50:46 +02:00
Ludovic Courtès 908935b512
tests: base: Fully honor the OS passed to 'run-basic-test'.
* gnu/tests/base.scm (run-basic-test)["uname"]: Use the host name of OS.
["shepherd services"]: Use service names from OS.
(%test-basic-os): Add call to 'virtualized-operating-system'.
2016-06-20 23:50:46 +02:00
David Thompson b0d388c9dc
gnu: guile-next: Update to 2.1.3.
* gnu/packages/guile.scm (guile-next): Update to 2.1.3.
2016-06-20 14:23:58 -04:00
Lukas Gradl 6d32dd8cef
gnu: Add argon2.
* gnu/packages/password-utils.scm (argon2): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-06-20 13:07:11 -04:00
Leo Famulari e52509a5ff
gnu: git: Update to 2.9.0
* gnu/packages/version-control.scm (git): Update to 2.9.0.
(git-manpages)[source]: Update hash.
2016-06-20 12:53:13 -04:00
Efraim Flashner acb6a8984e
gnu: chicken: Update to 4.11.0 [fixes CVE-2014-9651].
* gnu/packages/scheme.scm (chicken): Update to 4.11.0.
2016-06-20 18:28:44 +03:00
Kei Kebreau d2cc38b713
gnu: Add quesoglc.
* gnu/packages/game-development.scm (quesoglc): New variable.
2016-06-20 09:03:30 -04:00
ng0 3099354dd4
gnu: perl-uri: Update to 1.71.
* gnu/packages/web.scm (perl-uri): Update to 1.71.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-06-20 21:02:54 +08:00
宋文武 b9cbfa52f7
gnu: Add guile-dbd-sqlite3.
* gnu/packages/guile.scm (guile-dbd-sqlite3): New variable.
2016-06-20 19:05:24 +08:00
宋文武 2d5907ad3c
gnu: Add guile-dbi.
* gnu/packages/guile.scm (guile-dbi): New variable.
2016-06-20 19:05:24 +08:00
Efraim Flashner 426bfed405
gnu: screen: Update to 4.4.0.
* gnu/packages/screen.scm (screen): Update to 4.4.0.
2016-06-20 12:56:03 +03:00
Ricardo Wurmus a5338dd467
gnu: Add emacs-lispy.
* gnu/packages/emacs.scm (emacs-lispy): New variable.
2016-06-20 07:06:59 +02:00
Ricardo Wurmus e1918ce486
gnu: Add emacs-iedit.
* gnu/packages/emacs.scm (emacs-iedit): New variable.
2016-06-20 07:06:58 +02:00
Ricardo Wurmus 93dba17c63
gnu: Add emacs-ace-window.
* gnu/packages/emacs.scm (emacs-ace-window): New variable.
2016-06-20 07:06:58 +02:00
Ricardo Wurmus 5edc24ec2c
gnu: Add emacs-avy.
* gnu/packages/emacs.scm (emacs-avy): New variable.
2016-06-20 07:06:58 +02:00
Ricardo Wurmus 12db29baaf
gnu: Add emacs-ivy.
* gnu/packages/emacs.scm (emacs-ivy): New variable.
2016-06-20 07:06:58 +02:00
Ricardo Wurmus 79b3d3ea58
gnu: Add emacs-hydra.
* gnu/packages/emacs.scm (emacs-hydra): New variable.
2016-06-20 07:06:57 +02:00
Ricardo Wurmus db1a496071
gnu: Add emacs-org-bullets.
* gnu/packages/emacs.scm (emacs-org-bullets): New variable.
2016-06-20 07:04:46 +02:00
Ludovic Courtès ca7a68ebeb
tests: Fix list of exports in (gnu tests).
* gnu/tests.scm: Export 'marionette-service-type'.
2016-06-20 00:52:53 +02:00
Ludovic Courtès e3de272a81
tests: Export 'run-basic-test'.
* gnu/tests/base.scm (run-basic-test): New procedure, extracted from ...
(%test-basic-os): ... here.  Use it.
2016-06-20 00:52:53 +02:00
Ludovic Courtès 04eb0fab3a
gnu: guix: Add 'current-guix' thunk.
* gnu/packages/package-management.scm (source-file?)
(make-git-predicate, current-guix): New procedures.
2016-06-20 00:52:53 +02:00
Ludovic Courtès e0b47290a7
services: Add 'gc-root-service-type'.
* gnu/services.scm (gc-roots->system-entry): New procedure.
(gc-root-service-type): New variable.
2016-06-20 00:52:53 +02:00
Efraim Flashner a0adbb0463
gnu: openldap: Use bdb-5.3.
* gnu/packages/openldap.scm (openldap)[inputs]: Switch to bdb-5.3.
2016-06-19 22:20:43 +03:00
Efraim Flashner 557fa39caa
gnu: Add bdb-5.3.
* gnu/packages/databases.scm (bdb-5.3): New variable.
2016-06-19 22:19:58 +03:00
Mark H Weaver 84530eef76
Merge branch 'master' into core-updates 2016-06-19 14:22:53 -04:00
Mark H Weaver 3ebba94d45
gnu: libxslt: Replace with 1.1.29 [fixes CVE-2016-{1683,1684}].
* gnu/packages/xml.scm (libxslt)[replacement]: New field.
(libxslt/fixed): New variable.
2016-06-19 13:59:01 -04:00
Ricardo Wurmus cb1436d8d2
gnu: synthv1: Update to 0.7.5.
* gnu/packages/music.scm (synthv1): Update to 0.7.5.
2016-06-18 21:26:58 +02:00
Ricardo Wurmus 669b7b83d8
gnu: Add lbzip2.
* gnu/packages/compression.scm (lbzip2): New variable.
2016-06-18 19:49:08 +02:00