Tobias Geerinckx-Rice
2fe29c8490
gnu: sslh: Update to 1.20.
...
* gnu/packages/networking.scm (sslh): Update to 1.20.
[native-inputs]: Add perl-conf-libconfig. Remove valgrind.
[arguments]: Re-indent.
2019-03-14 19:47:28 +01:00
Tobias Geerinckx-Rice
98580bd93a
gnu: Add perl-conf-libconfig.
...
* gnu/packages/perl.scm (perl-conf-libconfig): New public variable.
2019-03-14 19:47:27 +01:00
Tobias Geerinckx-Rice
925926bab1
gnu: sslh: Don't use unstable tarball.
...
* gnu/packages/networking.scm (sslh)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-14 19:47:27 +01:00
Marius Bakke
1e33331cce
gnu: dconf: Update to 0.32.0.
...
* gnu/packages/gnome.scm (dconf): Update to 0.32.0.
[native-inputs]: Add BASH-COMPLETION.
2019-03-14 19:40:10 +01:00
Marius Bakke
3ea5a8ee47
gnu: at-spi2-atk: Update to 2.32.0.
...
* gnu/packages/gtk.scm (at-spi2-atk): Update to 2.32.0.
[build-system]: Change to MESON-BUILD-SYSTEM.
[arguments]: Adjust test invokation.
[native-inputs]: Add LIBXML2.
2019-03-14 19:39:09 +01:00
Marius Bakke
5254f17eeb
gnu: at-spi2-core: Update to 2.32.0.
...
* gnu/packages/gtk.scm (at-spi2-core): Update to 2.32.0.
[arguments]: Adjust for renamed configure flag.
[inputs]: Move LIBXI and LIBXTST ...
[propagated-inputs]: ... here.
2019-03-14 19:37:46 +01:00
Marius Bakke
5f07df1743
gnu: atk: Update to 2.32.0.
...
* gnu/packages/gtk.scm (atk): Update to 2.32.0.
[build-system]: Change to MESON-BUILD-SYSTEM.
[outputs]: Remove (due to dependency cycle on gtk-doc).
[arguments]: Remove.
[native-inputs]: Add GETTEXT-MINIMAL.
2019-03-14 19:36:26 +01:00
Danny Milosavljevic
625697ea60
gnu: lxqt-about: Make it more reproducible.
...
* gnu/packages/lxqt.scm (lxqt-about)[arguments]<#:phases>[setenv]: New phase.
2019-03-14 16:47:19 +01:00
Meiyo Peng
50bc1d0125
gnu: screengrab: Update to 1.101.
...
* gnu/packages/lxqt.scm (screengrab): Update to 1.101.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:19 +01:00
Meiyo Peng
d30cd1a552
gnu: qterminal: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (qterminal): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:19 +01:00
Meiyo Peng
238e42a3e5
gnu: qtermwidget: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (qtermwidget): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
6d3a2dbef1
gnu: qps: Update to 1.10.20.
...
* gnu/packages/lxqt.scm (qps): Update to 1.10.20.
[native-inputs]: Add lxqt-build-tools.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
f376b3254c
gnu: pavucontrol-qt: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (pavucontrol-qt): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
b42bd22ebd
gnu: obconf-qt: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (obconf-qt): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
f2a8c02c9a
gnu: lximage-qt: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lximage-qt): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
3f0294c196
gnu: compton-conf: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (compton-conf): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
cd7248bb42
gnu: pcmanfm-qt: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (pcmanfm-qt): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
b3f562921e
gnu: libfm-qt: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (libfm-qt): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
3cc904ab7c
gnu: lxqt-themes: Update to 0.14.0.
...
* gnu/packages/lxqt.scm (lxqt-themes): Update to 0.14.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
3b7348c4dc
gnu: lxqt-sudo: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lxqt-sudo): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
536afd9bf2
gnu: lxqt-session: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lxqt-session): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
1b8daca27b
gnu: lxqt-runner: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lxqt-runner): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
63c80bd7a9
gnu: lxqt-qtplugin: Update to 0.14.0.
...
* gnu/packages/lxqt.scm (lxqt-qtplugin): Update to 0.14.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
84dea9bb71
gnu: lxqt-powermanagement: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lxqt-powermanagement): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
45ef5374a7
gnu: lxqt-policykit: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lxqt-policykit): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:18 +01:00
Meiyo Peng
c4a17525b9
gnu: lxqt-panel: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lxqt-panel): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng
a728afb63b
gnu: lxqt-openssh-askpass: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lxqt-openssh-askpass): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng
4625cc66bf
gnu: lxqt-notificationd: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lxqt-notificationd): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng
39387425fd
gnu: lxqt-globalkeys: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lxqt-globalkeys): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng
2493df4404
gnu: lxqt-config: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lxqt-config): Update to 0.14.1.
[inputs]: Add eudev, libxi, xf86-input-libinput.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng
6a75a1a561
gnu: lxqt-admin: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lxqt-admin): Update to 0.14.1.
[arguments]: Remove #:configure-flags
<#:phases>[patch-translations-dir]: New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng
f42b4080c3
gnu: lxqt-about: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (lxqt-about): Update to 0.14.1.
[arguments]: Remove #:configure-flags.
<#:phases>[patch-translations-dir]: New phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng
4c3553ab41
gnu: libsysstat: Update to 0.4.2.
...
* gnu/packages/lxqt.scm (libsysstat): Update to 0.4.2.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng
9f87e52fbb
gnu: liblxqt: Update to 0.14.1.
...
* gnu/packages/lxqt.scm (liblxqt): Update to 0.14.1.
[arguments]: Remove #:configure-flags. Add 'patch-translations-dir' phase.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng
c1105c4bcf
gnu: libqtxdg: Update to 3.3.1.
...
* gnu/packages/lxqt.scm (libqtxdg): Update to 3.3.1.
[native-inputs]: Add lxqt-build-tools.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng
5b7a354d72
gnu: lxqt-build-tools: Update to 0.6.0.
...
* gnu/packages/lxqt.scm (lxqt-build-tools): Update to 0.6.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng
d1d8235e45
gnu: libfm: Update to 1.3.1.
...
* gnu/packages/lxde.scm (libfm): Update to 1.3.1.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:17 +01:00
Meiyo Peng
a436a4919b
gnu: menu-cache: Update to 1.1.0.
...
* gnu/packages/lxde.scm (menu-cache): Update to 1.1.0.
Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-03-14 16:47:14 +01:00
Marius Bakke
c958c31cae
gnu: double-conversion: Update to 3.1.4.
...
* gnu/packages/maths.scm (double-conversion): Update to 3.1.4.
2019-03-14 15:40:10 +01:00
Marius Bakke
4d9ebc62ba
gnu: gtk+: Update to 3.24.7.
...
* gnu/packages/gtk.scm (gtk+): Update to 3.24.7.
2019-03-14 15:40:09 +01:00
Marius Bakke
ebfe259f66
Merge branch 'master' into staging
2019-03-14 15:06:06 +01:00
Marius Bakke
8cc3983a4d
gnu: jasper: Update to 2.0.16.
...
* gnu/packages/image.scm (jasper): Update to 2.0.16.
2019-03-14 14:44:01 +01:00
Marius Bakke
22656b24d8
gnu: rapidjson: Update home page.
...
* gnu/packages/web.scm (rapidjson)[source, home-page]: Follow redirected URL.
2019-03-14 14:44:01 +01:00
Marius Bakke
84ff7821ff
gnu: samba: Update to 4.9.5.
...
* gnu/packages/samba.scm (samba): Update to 4.9.5.
2019-03-14 14:44:01 +01:00
Marius Bakke
dd10c0adad
gnu: libzip: Update to 1.5.2.
...
* gnu/packages/compression.scm (libzip): Update to 1.5.2.
2019-03-14 14:44:00 +01:00
Marius Bakke
66fea0c4d9
gnu: libzip: Don't use NAME in source URI.
...
* gnu/packages/compression.scm (libzip)[source](uri): Hard-code NAME.
2019-03-14 14:44:00 +01:00
Marius Bakke
72663b4822
gnu: WebKitGTK: Update to 2.24.0.
...
* gnu/packages/webkit.scm (webkitgtk-2.22): Rename to ...
(webkitgtk-2.24): ... this. Update to 2.24.0.
[inputs]: Add OPENJPEG.
* gnu/packages/gnome.scm (eolie, epiphany)[inputs]: Adjust accordingly.
* gnu/packages/web-browsers.scm (next-gtk-webkit)[inputs]: Likewise.
2019-03-14 14:44:00 +01:00
Marius Bakke
eccaa8bf8d
gnu: libsoup: Update to 2.66.0.
...
* gnu/packages/gnome.scm (libsoup): Update to 2.66.0.
[build-system]: Change to MESON-BUILD-SYSTEM.
[arguments]: Adjust accordingly.
[native-inputs]: Add GTK-DOC.
[inputs]: Add MIT-KRB5. Move SQLITE and LIBPSL ...
[propagated-inputs]: ... here.
2019-03-14 14:44:00 +01:00
Marius Bakke
b165fe61dc
gnu: Kodi: Add Wayland variant.
...
* gnu/packages/kodi.scm (kodi/wayland): New public variable.
2019-03-14 14:44:00 +01:00
Marius Bakke
1f2e060148
gnu: Add waylandpp.
...
* gnu/packages/freedesktop.scm (waylandpp): New public variable.
2019-03-14 14:43:59 +01:00
Brett Gilio
209393a003
gnu: Add emacs-lsp-ui.
...
* gnu/packages/emacs-xyz.scm (emacs-lsp-ui): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-14 11:42:06 +01:00
Brett Gilio
60adaae0cf
gnu: Add emacs-lsp-mode.
...
* gnu/packages/emacs-xyz.scm (emacs-lsp-mode): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-14 11:40:07 +01:00
Brett Gilio
3490212a41
gnu: emacs-dash: Update to 2.15.0.
...
* gnu/packages/emacs-xyz.scm (emacs-dash): Update to 2.15.0.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-14 11:37:35 +01:00
Vagrant Cascadian
8cd10b22f9
gnu: Update dtc to 1.5.0.
...
* gnu/packages/bootloaders (dtc): Update to 1.5.0.
[native-inputs]: Add libyaml and pkg-config.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-14 11:02:40 +01:00
Meiyo Peng
bb2f114de9
gnu: fish: Update to 3.0.2.
...
* gnu/packages/shells.scm (fish): Update to 3.0.2.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-14 11:01:11 +01:00
Nicolò Balzarotti
100f56024e
gnu: Add r-rematch2.
...
* gnu/packages/cran.scm (r-rematch2): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-14 10:54:49 +01:00
Leo Famulari
8a55c38915
gnu: w3m: Update to 0.5.3+git20190105.
...
* gnu/packages/w3m.scm (w3m): Update to 0.5.3+git20190105.
2019-03-13 20:06:15 -04:00
Ludovic Courtès
b94c80ff5d
linux-container: 'containerized-operating-system' removes "useless" services.
...
Fixes <https://bugs.gnu.org/34211 >.
Reported by Efraim Flashner <efraim@flashner.co.il>.
* gnu/system/linux-container.scm (containerized-operating-system)
[useless-services]: New variable.
Add 'services' field.
2019-03-13 23:12:44 +01:00
Ludovic Courtès
82f29e5b4f
installer: network: Adjust wording.
...
* gnu/installer/newt/network.scm (wait-service-online): Adjust wording
of the messages.
2019-03-13 23:12:43 +01:00
Ludovic Courtès
4cd386afae
linux-modules: Factorize 'missing-modules'.
...
* gnu/build/linux-modules.scm (missing-modules): New procedure.
* gnu/system/mapped-devices.scm (check-device-initrd-modules): Use it.
2019-03-13 23:12:43 +01:00
Ludovic Courtès
59e8044588
Remove traces of "GuixSD".
...
* gnu/bootloader/extlinux.scm (extlinux-configuration-file): Remove
mentions of "GuixSD".
* gnu/bootloader/grub.scm (install-grub-efi): Likewise.
* gnu/build/vm.scm (make-iso9660-image): Change default #:volume-id to
"Guix_image".
(initialize-hard-disk): Search for the "Guix_image" label.
* gnu/ci.scm (system-test-jobs, tarball-jobs): Remove "GuixSD".
* gnu/installer/newt/welcome.scm (run-welcome-page): Likewise.
* gnu/packages/audio.scm (supercollider)[description]: Likewise.
* gnu/packages/curl.scm (curl): Likewise.
* gnu/packages/emacs.scm (emacs): Likewise.
* gnu/packages/gnome.scm (network-manager): Likewise.
* gnu/packages/julia.scm (julia): Likewise.
* gnu/packages/linux.scm (alsa-plugins): Likewise.
(powertop, wireless-regdb): Likewise.
* gnu/packages/package-management.scm (guix): Likewise.
* gnu/packages/polkit.scm (polkit): Likewise.
* gnu/packages/tex.scm (texlive-bin): Likewise.
* gnu/services/base.scm (file-systems->fstab): Likewise.
* gnu/services/cups.scm (%cups-activation): Likewise.
* gnu/services/mail.scm (%dovecot-activation): Likewise.
* gnu/services/messaging.scm (prosody-configuration)[log]: Likewise.
* gnu/system/examples/vm-image.tmpl (vm-image-motd): Likewise.
* gnu/system/install.scm (installation-os)[file-systems]: Change root
file system label to "Guix_image".
* gnu/system/mapped-devices.scm (check-device-initrd-modules):
Remove "GuixSD".
* gnu/system/vm.scm (system-docker-image): Likewise.
(system-disk-image)[root-label]: Change to "Guix_image".
* gnu/tests/install.scm (run-install): Remove "GuixSD".
* guix/modules.scm (guix-module-name?): Likewise.
* nix/libstore/optimise-store.cc: Likewise.
2019-03-13 23:12:43 +01:00
Ricardo Wurmus
fd4c7a098a
gnu: Add python-velocyto.
...
* gnu/packages/bioinformatics.scm (python-velocyto): New variable.
2019-03-13 22:48:53 +01:00
Ricardo Wurmus
55a0a3c853
gnu: python-loompy: Update to 2.0.17.
...
* gnu/packages/bioinformatics.scm (python-loompy): Update to 2.0.17.
[source]: Fetch via git.
[arguments]: Enable tests, replace "check" phase.
[propagated-inputs]: Add python-pandas.
[native-inputs]: Add python-pytest.
2019-03-13 22:48:52 +01:00
Oleg Pykhalov
1f058eced3
gnu: Add emacs-dockerfile-mode.
...
* gnu/packages/emacs-xyz.scm (emacs-dockerfile-mode): New variable.
2019-03-13 23:23:49 +03:00
Oleg Pykhalov
18964a6029
gnu: Add emacs-docker.
...
* gnu/packages/emacs-xyz.scm (emacs-docker): New variable.
2019-03-13 23:23:49 +03:00
Oleg Pykhalov
3899ae891c
gnu: Add emacs-docker-tramp.
...
* gnu/packages/emacs-xyz.scm (emacs-docker-tramp): New variable.
2019-03-13 23:23:49 +03:00
Ricardo Wurmus
7757e6d8b9
gnu: python-numba: Update to 0.42.0.
...
* gnu/packages/python-xyz.scm (python-numba): Update to 0.42.0.
2019-03-13 20:44:25 +01:00
Ricardo Wurmus
f932540773
gnu: python-llvmlite: Update to 0.27.1.
...
* gnu/packages/llvm.scm (python-llvmlite): Update to 0.27.1.
[inputs]: Update patch for custom LLVM variant.
2019-03-13 20:43:55 +01:00
Ricardo Wurmus
6d37301bd5
gnu: Add python-on-guile.
...
* gnu/packages/guile-xyz.scm (python-on-guile): New variable.
2019-03-13 20:43:35 +01:00
Ricardo Wurmus
8f05252862
gnu: guile-persist: Install go files to canonical directory.
...
* gnu/packages/guile-xyz.scm (guile-persist)[arguments]: Patch target
directory for go files in build phase "patch-prefix".
2019-03-13 20:42:23 +01:00
Ricardo Wurmus
8318b3ed8c
gnu: guile-stis-parser: Install go files to canonical directory.
...
* gnu/packages/guile-xyz.scm (guile-stis-parser)[arguments]: Add build phase
"use-canonical-directory-for-go-files".
2019-03-13 20:41:41 +01:00
Ricardo Wurmus
b9445d0b76
gnu: Add kaldi.
...
* gnu/packages/machine-learning.scm (kaldi): New variable.
2019-03-13 19:30:19 +01:00
Ricardo Wurmus
a97796cd53
gnu: Add r-valr.
...
* gnu/packages/cran.scm (r-valr): New variable.
2019-03-13 17:19:58 +01:00
Ricardo Wurmus
4291f36a22
gnu: Add r-linnorm.
...
* gnu/packages/bioconductor.scm (r-linnorm): New variable.
2019-03-13 17:13:21 +01:00
Ricardo Wurmus
70daf82f28
gnu: Add python2-argparse.
...
* gnu/packages/python-xyz.scm (python2-argparse): New variable.
2019-03-13 17:11:09 +01:00
Ricardo Wurmus
3942bf5e4c
gnu: Add r-apcluster.
...
* gnu/packages/cran.scm (r-apcluster): New variable.
2019-03-13 17:10:53 +01:00
Ricardo Wurmus
51df43408b
gnu: Add r-gmodels.
...
* gnu/packages/cran.scm (r-gmodels): New variable.
2019-03-13 17:10:41 +01:00
Ricardo Wurmus
0b5d12ccdf
gnu: Add tetoolkit.
...
* gnu/packages/bioinformatics.scm (tetoolkit): New variable.
2019-03-13 15:14:10 +01:00
Ricardo Wurmus
984a8aa644
gnu: Add r-irkernel.
...
* gnu/packages/cran.scm (r-irkernel): New variable.
2019-03-13 14:26:45 +01:00
Ricardo Wurmus
664dedd524
gnu: Add r-irdisplay.
...
* gnu/packages/cran.scm (r-irdisplay): New variable.
2019-03-13 14:26:34 +01:00
Ricardo Wurmus
d17186d626
gnu: Add r-repr.
...
* gnu/packages/cran.scm (r-repr): New variable.
2019-03-13 14:26:25 +01:00
Ricardo Wurmus
f313baf0c8
gnu: Add r-pbdzmq.
...
* gnu/packages/cran.scm (r-pbdzmq): New variable.
2019-03-13 14:26:08 +01:00
Ricardo Wurmus
9475a248fc
gnu: Add r-illuminahumanmethylationepicmanifest.
...
* gnu/packages/bioconductor.scm (r-illuminahumanmethylationepicmanifest):
New variable.
2019-03-13 13:49:20 +01:00
Ricardo Wurmus
09605cb2d1
gnu: Add r-lumi.
...
* gnu/packages/bioconductor.scm (r-lumi): New variable.
2019-03-13 13:35:40 +01:00
Ricardo Wurmus
5ec5ba0272
gnu: Add r-methylumi.
...
* gnu/packages/bioconductor.scm (r-methylumi): New variable.
2019-03-13 13:35:33 +01:00
Ricardo Wurmus
0f5c9cec50
gnu: Add r-fdb-infiniummethylation-hg19.
...
* gnu/packages/bioconductor.scm (r-fdb-infiniummethylation-hg19): New variable.
2019-03-13 13:35:18 +01:00
Ricardo Wurmus
86fded86c2
gnu: portaudio: Build position independent code and install more headers.
...
* gnu/packages/audio.scm (portaudio)[arguments]: Pass "--with-pic" and
initialize libtool in new build phase "build-only-position-independent-code";
install extra header in new build phase "install-missing-headers".
2019-03-13 13:19:06 +01:00
Ricardo Wurmus
0fbaf1956b
gnu: Add r-minfi.
...
* gnu/packages/bioconductor.scm (r-minfi): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
34a24f95ec
gnu: Add r-bumphunter.
...
* gnu/packages/bioconductor.scm (r-bumphunter): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
f4eac09653
gnu: Add r-siggenes.
...
* gnu/packages/bioconductor.scm (r-siggenes): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
eed6ff0358
gnu: Add r-illuminaio.
...
* gnu/packages/bioconductor.scm (r-illuminaio): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
f9201d6704
gnu: Add r-geoquery.
...
* gnu/packages/bioconductor.scm (r-geoquery): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
f088775799
gnu: Add r-scone.
...
* gnu/packages/bioconductor.scm (r-scone): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
b409c3570f
gnu: Add r-scdd.
...
* gnu/packages/bioconductor.scm (r-scdd): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
6213e44185
gnu: Add r-noiseq.
...
* gnu/packages/bioconductor.scm (r-noiseq): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
2d7627cfff
gnu: Add r-monocle.
...
* gnu/packages/bioconductor.scm (r-monocle): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
925fcdbb79
gnu: Add r-mast.
...
* gnu/packages/bioconductor.scm (r-mast): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
251e08301a
gnu: Add r-icobra.
...
* gnu/packages/bioconductor.scm (r-icobra): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
648dbd2702
gnu: Add r-beanplot.
...
* gnu/packages/cran.scm (r-beanplot): New variable.
2019-03-13 13:17:52 +01:00
Ricardo Wurmus
026dd77c63
gnu: Add r-nor1mix.
...
* gnu/packages/cran.scm (r-nor1mix): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus
30f53ec86d
gnu: Add r-ggextra.
...
* gnu/packages/cran.scm (r-ggextra): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus
c27927dbf5
gnu: Add r-colourpicker.
...
* gnu/packages/cran.scm (r-colourpicker): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus
5146a24ece
gnu: Add r-shinyjs.
...
* gnu/packages/cran.scm (r-shinyjs): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus
849350fbce
gnu: Add r-shinybs.
...
* gnu/packages/cran.scm (r-shinybs): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus
704de8f5ee
gnu: Add r-ihw.
...
* gnu/packages/bioconductor.scm (r-ihw): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus
2cb71d81a4
gnu: Add r-lpsymphony.
...
* gnu/packages/bioconductor.scm (r-lpsymphony): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus
3087a2f37b
gnu: Add r-ebseq.
...
* gnu/packages/bioconductor.scm (r-ebseq): New variable.
2019-03-13 13:17:51 +01:00
Ricardo Wurmus
7ed869f796
gnu: Add r-nbpseq.
...
* gnu/packages/bioconductor.scm (r-nbpseq): New variable.
2019-03-13 13:17:51 +01:00
Nicolas Goaziou
2b6ab17f7d
gnu: wireshark: Update to 3.0.0.
...
* gnu/packages/networking.scm (wireshark): Update to 3.0.0.
2019-03-13 12:31:13 +01:00
Tomáš Čech
77f3d30364
gnu: python-py3status: Update to 3.16.
...
* gnu/packages/python-xyz.scm (python-py3status): Update to 3.16.
2019-03-13 10:06:19 +01:00
Jack Hill
2f041a4cef
gnu: r-minpack-lm: Fix typo in description.
...
* gnu/packages/cran.scm (r-minpack-lm)[description]: Fix typo.
Signed-off-by: Leo Famulari <leo@famulari.name>
2019-03-13 00:37:11 -04:00
Nicolas Goaziou
0d5101c3a3
gnu: rosegarden: Update to 18.12.
...
* gnu/packages/music.scm (rosegarden): Update to 18.12.
[arguments]: Remove unused flag.
2019-03-12 23:58:52 +01:00
Nicolas Goaziou
a269c89457
gnu: musescore: Update to 3.0.5.
...
* gnu/packages/music.scm (musescore): Update to 3.0.5.
2019-03-12 23:58:52 +01:00
Ludovic Courtès
c9c51ac39a
Revert "packages: 'package-input-rewriting' can take a promise."
...
This reverts commit 7d2be1277b
, which
turned out to be unhelpful for the problem at hand:
https://lists.gnu.org/archive/html/guix-devel/2019-01/msg00486.html
2019-03-12 23:51:32 +01:00
Ricardo Wurmus
29e76f0722
gnu: guile-stis-parser: Override source file name.
...
* gnu/packages/guile-xyz.scm (guile-stis-parser)[source]: Provide file name
for git checkout.
2019-03-12 22:48:40 +01:00
Ricardo Wurmus
173c99601a
gnu: Add r-deds.
...
* gnu/packages/bioconductor.scm (r-deds): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus
5570804a69
gnu: Add r-zim.
...
* gnu/packages/cran.scm (r-zim): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus
be0777ba86
gnu: Add r-penalized.
...
* gnu/packages/cran.scm (r-penalized): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus
4d1f19e02c
gnu: Add r-nonnest2.
...
* gnu/packages/cran.scm (r-nonnest2): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus
ca3f13704a
gnu: Add r-lavaan.
...
* gnu/packages/cran.scm (r-lavaan): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus
e8be5a0098
gnu: Add r-pbivnorm.
...
* gnu/packages/cran.scm (r-pbivnorm): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus
9e2ff342aa
gnu: Add r-msir.
...
* gnu/packages/cran.scm (r-msir): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus
01fe44cbdc
gnu: Add r-moments.
...
* gnu/packages/cran.scm (r-moments): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus
4fd994432f
gnu: Add r-minpack-lm.
...
* gnu/packages/cran.scm (r-minpack-lm): New variable.
2019-03-12 22:47:57 +01:00
Ricardo Wurmus
061a4b6850
gnu: Add r-gamlss-dist.
...
* gnu/packages/cran.scm (r-gamlss-dist): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
c60e3e10f3
gnu: Add r-drimpute.
...
* gnu/packages/cran.scm (r-drimpute): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
5f673e2c1c
gnu: Add r-cobs.
...
* gnu/packages/cran.scm (r-cobs): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
5fde35b385
gnu: Add r-compositions.
...
* gnu/packages/cran.scm (r-compositions): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
7d779142ab
gnu: Add r-rarpack.
...
* gnu/packages/cran.scm (r-rarpack): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
262ab4b17c
gnu: Add r-tensora.
...
* gnu/packages/cran.scm (r-tensora): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
8cd3f49d46
gnu: Add r-bayesm.
...
* gnu/packages/cran.scm (r-bayesm): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
1901a53241
gnu: Add r-outliers.
...
* gnu/packages/cran.scm (r-outliers): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
4af186a963
gnu: Add r-upsetr.
...
* gnu/packages/cran.scm (r-upsetr): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
f3233beec5
gnu: Add r-blockmodeling.
...
* gnu/packages/cran.scm (r-blockmodeling): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
c691c607d7
gnu: Add r-dorng.
...
* gnu/packages/cran.scm (r-dorng): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
4dc2ecc279
gnu: r-qvalue: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-qvalue): Move from here...
* gnu/packages/bioconductor.scm (r-qvalue): ...to here.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
557a1089c6
gnu: Add r-hsmmsinglecell.
...
* gnu/packages/bioconductor.scm (r-hsmmsinglecell): New variable.
2019-03-12 22:47:56 +01:00
Ricardo Wurmus
12d73f9c3c
gnu: Add guile-persist.
...
* gnu/packages/guile-xyz.scm (guile-persist): New variable.
2019-03-12 22:47:56 +01:00
Oleg Pykhalov
e80a809f1f
gnu: Add tmux-xpanes.
...
* gnu/packages/tmux.scm (tmux-xpanes): New variable.
2019-03-12 22:41:31 +03:00
Brian Leung
94a33ab899
gnu: Add emacs-eshell-bookmark.
...
* gnu/packages/emacs-xyz.scm (emacs-eshell-bookmark): New variable.
Signed-off-by: Oleg Pykhalov <go.wigust@gmail.com>
2019-03-12 21:56:09 +03:00
Julien Lepiller
2ffec22eeb
gnu: python-pygit2: Update to 0.27.4.
...
* gnu/packages/python-xyz.scm (python-pygit2): Update to 0.27.4.
(python-pygit2)[arguments]: Disable tests.
2019-03-12 18:56:34 +01:00
Efraim Flashner
7458ceaca8
gnu: inxi-minimal: Declare source-file-name.
...
* gnu/packages/admin.scm (inxi-minimal)[source]: Add missing field.
2019-03-12 17:29:19 +02:00
Tobias Geerinckx-Rice
49fb2d0922
gnu: inxi-minimal: Update to 3.0.22-1.
...
* gnu/packages/admin.scm (inxi-minimal): Update to 3.0.22-1.
2019-03-12 15:26:21 +01:00
Tobias Geerinckx-Rice
17ab1e43a6
gnu: perl-anyevent: Update to 7.15.
...
* gnu/packages/libevent.scm (perl-anyevent): Update to 7.15.
2019-03-12 15:26:21 +01:00
Tobias Geerinckx-Rice
2f805e97f2
gnu: aide: Update to 0.16.1.
...
* gnu/packages/admin.scm (aide): Update to 0.16.1.
2019-03-12 15:26:21 +01:00
Tobias Geerinckx-Rice
737300be4b
gnu: aide: Move project home.
...
* gnu/packages/admin.scm (aide)[source, home-page]: Update.
2019-03-12 15:26:20 +01:00
Tobias Geerinckx-Rice
8dbd8e426c
gnu: aspell-dict-it: Update to 2.4-20070901-0.
...
* gnu/packages/aspell.scm (aspell-dict-it): Update to 2.4-20070901-0.
2019-03-12 15:26:20 +01:00
Tobias Geerinckx-Rice
b4ed7c3e8d
gnu: libinput: Don't use NAME in source URI.
...
* gnu/packages/freedesktop.scm (libinput)[source]: Hard-code NAME.
2019-03-12 15:26:20 +01:00
Tobias Geerinckx-Rice
e3df159edc
gnu: geos: Update to 3.7.1.
...
* gnu/packages/geo.scm (geos): Update to 3.7.1.
2019-03-12 15:26:19 +01:00
Rutger Helling
47b3eed821
gnu: vulkan-headers: Update to 1.103.
...
* gnu/packages/vulkan.scm (vulkan-headers): Update to 1.1.103.
* gnu/packages/vulkan.scm (vulkan-loader): Adjust version.
* gnu/packages/vulkan.scm (vulkan-tools): Adjust version.
2019-03-12 11:20:41 +01:00
Pierre Neidhardt
75dabac633
gnu: Add emacs-lisp-extra-font-lock.
...
* gnu/packages/emacs-xyz.scm (emacs-lisp-extra-font-lock): New variable.
2019-03-12 09:28:01 +01:00
Pierre Neidhardt
b6180f93bd
gnu: emacs-suggest: Update to 0.7.
...
* gnu/packages/emacs-xyz.scm (emacs-suggest): Update to 0.7.
2019-03-12 09:24:31 +01:00
Pierre Neidhardt
a922b2aee2
gnu: emacs-helm: Update to 3.1.
...
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.1.
2019-03-12 08:06:50 +01:00
Tobias Geerinckx-Rice
2ee05bb9d4
gnu: freedink-engine: Update to 109.6.
...
* gnu/packages/games.scm (freedink-engine): Update to 109.6.
2019-03-12 02:22:37 +01:00
Tobias Geerinckx-Rice
98704a8133
gnu: libmanette: Update to 0.2.2.
...
* gnu/packages/games.scm (libmanette): Update to 0.2.2.
2019-03-12 02:22:37 +01:00
Tobias Geerinckx-Rice
a554462123
gnu: kicad-symbols: Use GIT-FILE-NAME.
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* packages/engineering.scm (kicad-symbols)[source]: Use GIT-FILE-NAME.
2019-03-12 02:22:36 +01:00
Tobias Geerinckx-Rice
65bab0120b
gnu: kicad-symbols: Update to 5.0.2.
...
* gnu/packages/engineering.scm (kicad-symbols): Update to 5.0.2.
2019-03-12 02:22:36 +01:00
Tobias Geerinckx-Rice
b13b7143d7
gnu: kicad: Don't use NAME in source URI.
...
* gnu/packages/engineering.scm (kicad)[source]: Hard-code NAME.
2019-03-12 02:22:36 +01:00
Tobias Geerinckx-Rice
23df8f3578
gnu: kicad: Update to 5.0.2.
...
* gnu/packages/engineering.scm (kicad): Update to 5.0.2.
2019-03-12 02:22:36 +01:00
Tobias Geerinckx-Rice
3d21f1ea0f
gnu: gtkwave: Update to 3.3.99.
...
* gnu/packages/fpga.scm (gtkwave): Update to 3.3.99.
2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice
5cfe650b9d
gnu: python-sqlalchemy: Use HTTPS home page.
...
* gnu/packages/databases.scm (python-sqlalchemy)[home-page]: Use HTTPS.
2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice
6d04f694dc
gnu: python-sqlalchemy: Update to 1.3.1.
...
* gnu/packages/databases.scm (python-sqlalchemy): Update to 1.3.1.
2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice
96ec46047b
gnu: gcompris-qt: Update to 0.96.
...
* gnu/packages/education.scm (gcompris-qt): Update to 0.96.
[inputs]: Add openssl.
2019-03-12 02:22:35 +01:00
Tobias Geerinckx-Rice
909404b571
gnu: python-sql: Update to 1.0.0.
...
* gnu/packages/databases.scm (python-sql): Update to 1.0.0.
2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice
99e690a59a
gnu: python-pyodbc: Update to 4.0.25.
...
* gnu/packages/databases.scm (python-pyodbc): Update to 4.0.25.
2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice
72b7de49b4
gnu: python-psycopg2: Update to 2.7.7.
...
* gnu/packages/databases.scm (python-psycopg2): Update to 2.7.7.
2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice
d49bdbca5c
gnu: perl-dbd-sqlite: Update to 1.62.
...
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.62.
2019-03-12 02:22:34 +01:00
Tobias Geerinckx-Rice
49596a5413
gnu: perl-dbd-mysql: Update to 4.050.
...
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.050.
2019-03-12 02:22:33 +01:00
Tobias Geerinckx-Rice
2f813be342
gnu: perl-sql-abstract: Update to 1.86.
...
* gnu/packages/databases.scm (perl-sql-abstract): Update to 1.86.
2019-03-12 02:22:33 +01:00
Tobias Geerinckx-Rice
55f4282e0c
gnu: guile-colorized: Move project home.
...
* gnu/packages/guile-xyz.scm (guile-colorized)[source, home-page]: Update.
2019-03-12 02:22:33 +01:00
Tobias Geerinckx-Rice
1340ce2899
gnu: guile-colorized: Don't use unstable tarball.
...
* gnu/packages/guile-xyz.scm (guile-colorized)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-12 02:22:33 +01:00
Brian Leung
1bc24bbf00
gnu: Add emacs-debpaste.
...
* gnu/packages/emacs-xyz.scm (emacs-debpaste): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-03-11 23:12:26 +01:00
Brian Leung
6f93b525d3
gnu: Add emacs-xml-rpc.
...
* gnu/packages/emacs-xyz.scm (emacs-xml-rpc): New variable.
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-03-11 23:12:26 +01:00
Ludovic Courtès
bfc9c33930
packages: Add the channel .go files to the search path.
...
Until now %LOAD-COMPILED-PATH would wrongfully contain:
CHANNEL/share/guile/site/X.Y
for each channel, thereby ignoring all the .go files of channels. This
fixes it so that %LOAD-COMPILED-PATH instead contains:
CHANNEL/lib/guile/X.Y/site-ccache
* guix/describe.scm (current-channel-entries): New procedure.
(package-path-entries): Change to return the %LOAD-COMPILED-PATH entries
as a second value.
* gnu/packages.scm (%package-module-path): Expect two values from
'package-path-entries' and augment %LOAD-COMPILED-PATH accordingly.
2019-03-11 23:12:26 +01:00
Ludovic Courtès
082c648d28
services: mate-desktop: Deprecate the 'mate-desktop-service' procedure.
...
* gnu/services/desktop.scm (mate-desktop-service): Deprecate.
* doc/guix.texi (Desktop Services): Document 'mate-desktop-service-type'
and 'mate-desktop-configuration'. Fix spelling of "Enlightenment".
2019-03-11 23:12:26 +01:00
Ludovic Courtès
984a61624c
services: mate-desktop: Add default value.
...
* gnu/services/desktop.scm (mate-desktop-service-type)[default-value]:
New field.
2019-03-11 23:12:26 +01:00
Marius Bakke
e440a75640
gnu: libxcomposite: Update to 0.4.5.
...
* gnu/packages/xorg.scm (libxcomposite): Update to 0.4.5.
2019-03-11 21:22:24 +01:00
Marius Bakke
e1c6102907
gnu: libxcursor: Update to 1.2.0.
...
* gnu/packages/xorg.scm (libxcursor): Update to 1.2.0.
2019-03-11 21:22:01 +01:00
Rutger Helling
7959ccac3f
gnu: swaylock: Fix indentation.
...
* gnu/packages/wm.scm (swaylock): Fix indentation.
2019-03-11 20:31:30 +01:00
Rutger Helling
b0805973cd
gnu: Add swaylock.
...
* gnu/packages/wm.scm (swaylock): New variable.
2019-03-11 20:28:41 +01:00
Rutger Helling
06ae5efcf3
gnu: Add swayidle.
...
* gnu/packages/wm.scm (swayidle): New variable.
2019-03-11 20:28:41 +01:00
Rutger Helling
2ff844f090
gnu: Add sway.
...
* gnu/packages/wm.scm (sway): New variable.
2019-03-11 20:28:41 +01:00
Rutger Helling
eea969cf8d
gnu: Add wlroots.
...
* gnu/packages/wm.scm (wlroots): New variable.
2019-03-11 20:28:41 +01:00
Pierre Neidhardt
684626763f
gnu: emacs-magit: Fix perl path in dedicated variable.
...
* gnu/packages/emacs-xyz.scm (emacs-magit)[arguments]: Do it.
2019-03-11 19:01:49 +01:00
Pierre Neidhardt
842e66c573
gnu: Add emacs-lorem-ipsum.
...
* gnu/packages/emacs-xyz.scm (emacs-lorem-ipsum): New variable.
2019-03-11 18:46:25 +01:00
Oleg Pykhalov
34e3d028b9
gnu: emacs-json-reformat: Fix test.
...
This patch deletes a test which tries to compare JSON objects order.
* gnu/packages/emacs-xyz.scm (emacs-json-reformat): Delete
'json-reformat-test:json-reformat-region' test.
2019-03-11 19:52:39 +03:00
Ricardo Wurmus
4948c23677
gnu: r-with-tests: Update to 3.5.3.
...
* gnu/packages/statistics.scm (r-with-tests): Update to 3.5.3.
2019-03-11 15:25:27 +01:00
Tobias Geerinckx-Rice
e445bd1607
gnu: s6-linux-utils: Update to 2.5.0.1.
...
* gnu/packages/skarnet.scm (s6-linux-utils): Update to 2.5.0.1.
2019-03-11 13:25:15 +01:00
Tobias Geerinckx-Rice
8dc458bb18
gnu: s6-linux-init: Update to 0.4.0.1.
...
* gnu/packages/skarnet.scm (s6-linux-init): Update to 0.4.0.1.
2019-03-11 13:25:14 +01:00
Tobias Geerinckx-Rice
b673d2d793
gnu: s6-portable-utils: Update to 2.2.1.3.
...
* gnu/packages/skarnet.scm (s6-portable-utils): Update to 2.2.1.3.
2019-03-11 13:25:14 +01:00
Tobias Geerinckx-Rice
0953b09aa8
gnu: s6-rc: Update to 0.5.0.0.
...
* gnu/packages/skarnet.scm (s6-rc): Update to 0.5.0.0.
2019-03-11 13:25:14 +01:00
Tobias Geerinckx-Rice
8722fd43d4
gnu: s6-networking: Update to 2.3.0.4.
...
* gnu/packages/skarnet.scm (s6-networking): Update to 2.3.0.4.
2019-03-11 13:25:14 +01:00
Tobias Geerinckx-Rice
ce3262e9a3
gnu: s6-dns: Update to 2.3.0.2.
...
* gnu/packages/skarnet.scm (s6-dns): Update to 2.3.0.2.
2019-03-11 13:25:13 +01:00
Tobias Geerinckx-Rice
6954594d5c
gnu: s6: Update to 2.8.0.0.
...
* gnu/packages/skarnet.scm (s6): Update to 2.8.0.0.
2019-03-11 13:25:13 +01:00
Tobias Geerinckx-Rice
5c9bf737c4
gnu: execline: Update to 2.5.1.0.
...
* gnu/packages/skarnet.scm (execline): Update to 2.5.1.0.
2019-03-11 13:25:13 +01:00
Tobias Geerinckx-Rice
a699a81b84
gnu: skalibs: Update to 2.8.0.1.
...
* gnu/packages/skarnet.scm (skalibs): Update to 2.8.0.1.
2019-03-11 13:25:13 +01:00
Tobias Geerinckx-Rice
5e5bd81843
gnu: picocom: Fix description.
...
* gnu/packages/terminals.scm (picocom)[synopsis]: Shorten.
[description]: Properly introduce.
2019-03-11 13:25:12 +01:00
Tobias Geerinckx-Rice
33238b5520
gnu: picocom: Update to 3.1.
...
* gnu/packages/terminals.scm (picocom): Update to 3.1.
2019-03-11 13:25:12 +01:00
Tobias Geerinckx-Rice
130c12c9b9
gnu: perl-image-exiftool: Update to 11.31.
...
* gnu/packages/photo.scm (perl-image-exiftool): Update to 11.31.
2019-03-11 13:25:12 +01:00
Tobias Geerinckx-Rice
0234f4af27
gnu: perl-image-exiftool: Add upstream URL.
...
* gnu/packages/photo.scm (perl-image-exiftool)[source]: Also download
from the home page.
2019-03-11 13:25:11 +01:00
Mark H Weaver
3edd7a3f4c
gnu: linux-libre: Update to 5.0.1.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.1.
(%linux-libre-hash): Update hash.
2019-03-11 07:14:58 -04:00
Mark H Weaver
32ede5bbf9
gnu: linux-libre@4.19: Update to 4.19.28.
...
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.28.
(%linux-libre-4.19-hash): Update hash.
2019-03-11 07:14:01 -04:00
Efraim Flashner
2206f23679
gnu: Add eternalterminal.
...
* gnu/packages/terminals.scm (eternalterminal): New variable.
2019-03-11 10:30:58 +02:00
Efraim Flashner
a5c8460a6d
gnu: crawl: Build without SSE only on some architecures.
...
This is a follow-up to b89284407f
.
* gnu/packages/games.scm (crawl)[arguments]: Remove custom 'patch-flags
phase, add make-flag on non-x86* architectures to build without SSE.
2019-03-11 10:06:29 +02:00
Tobias Geerinckx-Rice
93a72fa7c9
gnu: xvid: Update to 1.3.5.
...
* gnu/packages/video.scm (xvid): Update to 1.3.5.
2019-03-11 02:08:04 +01:00
Tobias Geerinckx-Rice
d05c14dfc9
gnu: python-acme, certbot: Update to 0.32.0.
...
* gnu/packages/tls.scm (python-acme): Update to 0.32.0.
(certbot)[source]: Update hash.
[native-inputs]: Replace python-nose with python-pytest.
[propagated-inputs]: Add python-cryptography.
2019-03-11 02:08:04 +01:00
Tobias Geerinckx-Rice
4d34fe4681
gnu: avidemux: Update to 2.7.2.
...
* gnu/packages/video.scm (avidemux): Update to 2.7.2.
[arguments]: Update version of included ffmpeg.
2019-03-11 02:08:04 +01:00
Tobias Geerinckx-Rice
642de36b9e
gnu: avidemux: Factorise ffmpeg version.
...
* gnu/packages/video.scm (avidemux)[arguments]: Move oft-repeated
hard-coded ffmpeg version number to a single let-bound variable.
2019-03-11 02:08:03 +01:00
Tobias Geerinckx-Rice
7d3ac6c08e
gnu: avidemux: Don't use NAME in source URI.
...
* gnu/packages/video.scm (avidemux)[source]: Hard-code NAME.
2019-03-11 02:08:03 +01:00
Tobias Geerinckx-Rice
129294e748
gnu: youtube-dl: Update to 2019.03.09.
...
* gnu/packages/video.scm (youtube-dl): Update to 2019.03.09.
2019-03-11 02:08:03 +01:00
Tobias Geerinckx-Rice
585be42f46
gnu: texmaker: Update to 5.0.3.
...
* gnu/packages/tex.scm (texmaker): Update to 5.0.3.
2019-03-11 02:08:03 +01:00
Tobias Geerinckx-Rice
dbfb24824b
gnu: stunnel: Update to 5.50.
...
* gnu/packages/web.scm (stunnel): Update to 5.50.
2019-03-11 02:08:02 +01:00
Tobias Geerinckx-Rice
a9644c5a49
gnu: you-get: Update to 0.4.1270.
...
* gnu/packages/video.scm (you-get): Update to 0.4.1270.
2019-03-11 02:08:02 +01:00
Tobias Geerinckx-Rice
266cd19eb9
gnu: nginx-documentation: Update to 2019-03-01-2345-7ef11708457e.
...
* gnu/packages/web.scm (nginx-documentation): Update to 2019-03-01-2345-7ef11708457e.
[arguments]: Simplify substitution.
2019-03-11 02:08:02 +01:00
Tobias Geerinckx-Rice
fd46742dd2
gnu: nginx: Update to 1.15.9.
...
* gnu/packages/web.scm (nginx): Update to 1.15.9.
2019-03-11 02:08:02 +01:00
Tobias Geerinckx-Rice
0330d6b2bf
gnu: xf86-video-ati: Update to 19.0.0.
...
* gnu/packages/xorg.scm (xf86-video-ati): Update to 19.0.0.
[source]: Re-indent.
2019-03-11 02:08:01 +01:00
Tobias Geerinckx-Rice
77ad8ec4fc
gnu: xf86-video-amdgpu: Update to 19.0.0.
...
* gnu/packages/xorg.scm (xf86-video-amdgpu): Update to 19.0.0.
[source]: Re-indent.
2019-03-11 02:08:01 +01:00
Tobias Geerinckx-Rice
c170080689
gnu: console-setup: Update to 1.190.
...
* gnu/packages/xorg.scm (console-setup): Update to 1.190.
2019-03-11 02:08:01 +01:00
Tobias Geerinckx-Rice
0189045904
gnu: snd: Update to 19.2.
...
* gnu/packages/audio.scm (snd): Update to 19.2.
2019-03-11 02:08:00 +01:00
Ludovic Courtès
8b3ad455be
services: guix: Pre-compute the default ACL.
...
This makes the first boot slightly faster.
* gnu/services/base.scm (not-config?): New procedure.
(hydra-key-authorization): Rewrite to pre-compute the default ACL, and
pre-compute it using (guix pki) directly.
2019-03-10 23:41:33 +01:00
Ludovic Courtès
309d87c3aa
services: guix: Allocate build user UIDs in the system range.
...
Until now we were allocating the UIDs of build users above 30000, which
is in "normal" user UID range. This static allocation was unnecessary,
so this change lets the system allocate UIDs in the system range (below
1000).
* gnu/services/base.scm (guix-build-accounts): Remove #:first-uid, and
remove 'uid' field from 'user-account'.
2019-03-10 23:41:33 +01:00
Ludovic Courtès
45fef894eb
gnu: gnome-shell: Avoid top-level reference to inkscape.
...
Fixes <https://bugs.gnu.org/34806 >.
Reported by Marius Bakke <mbakke@fastmail.com>.
* gnu/packages/gnome.scm (gnome-shell)[source](snippet): Remove
reference to INKSCAPE. Instead, simply copy the SVG file to
data/theme.
[arguments]: Add 'convert-logo-to-png' phase.
[native-inputs]: Add INKSCAPE.
2019-03-10 23:41:33 +01:00
Tobias Geerinckx-Rice
5ae5932b2f
gnu: ansible: Update to 2.7.8 [fixes CVE-2019-3828].
...
* gnu/packages/admin.scm (ansible): Update to 2.7.8.
2019-03-10 23:00:08 +01:00
Marius Bakke
7fda7b8fad
gnu: pugixml: Build as shared library.
...
* gnu/packages/patches/pugixml-versioned-libdir.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xml.scm (pugixml)[source](patches): New field.
[arguments]: Instruct the build system to create a shared rather than static
library.
[native-inputs]: Add PKG-CONFIG.
2019-03-10 21:44:25 +01:00
Marius Bakke
e2bdf60982
gnu: FileZilla: Update to 3.41.1.
...
* gnu/packages/ftp.scm (filezilla): Update to 3.41.1.
2019-03-10 21:44:25 +01:00
Marius Bakke
6324727770
gnu: pugixml is a regular input.
...
* gnu/packages/emulators.scm (mame)[native-inputs]: Move PUGIXML ...
[inputs]: ... here.
* gnu/packages/ftp.scm (filezilla)[native-inputs, inputs]: Likewise.
2019-03-10 21:44:25 +01:00
Oleg Pykhalov
e44de1d2fb
services: zabbix-front-end: Show location in messages.
...
* gnu/services/monitoring.scm (zabbix-front-end-config): Show location in
messages.
2019-03-10 21:32:38 +03:00
Oleg Pykhalov
d132d9f96b
services: configuration: Add '%location'.
...
* gnu/services/configuration.scm (define-configuration): Add '%location'.
2019-03-10 21:32:38 +03:00
Marius Bakke
a4de1a651e
gnu: double-conversion: Update to 3.1.3.
...
* gnu/packages/maths.scm (double-conversion): Update to 3.1.3.
[source](uri): Adjust for version tag prefix.
2019-03-10 18:38:51 +01:00
Marius Bakke
55f80e1592
gnu: libvdpau: Update to 1.2.
...
* gnu/packages/video.scm (libvdpau): Update to 1.2.
[source](uri): Adjust for new URL.
2019-03-10 18:38:51 +01:00
Marius Bakke
792737e9ab
gnu: subversion: Update to 1.10.4 [fixes CVE-2018-11803].
...
* gnu/packages/version-control.scm (subversion): Update to 1.10.4.
2019-03-10 18:38:51 +01:00
Marius Bakke
1c4724634c
gnu: libuninameslist: Update to 20190305.
...
* gnu/packages/fontutils.scm (libuninameslist): Update to 20190305.
2019-03-10 18:38:50 +01:00
Marius Bakke
8c5533b582
Merge branch 'master' into staging
2019-03-10 18:38:25 +01:00
Marius Bakke
41ce92501b
gnu: xfd: Update to 1.1.3.
...
* gnu/packages/xorg.scm (xfd): Update to 1.1.3.
2019-03-10 18:30:51 +01:00
Marius Bakke
06e3ed5d19
gnu: xprop: Update to 1.2.4.
...
* gnu/packages/xorg.scm (xprop): Update to 1.2.4.
2019-03-10 18:30:51 +01:00
Marius Bakke
df8dbfb30b
gnu: notmuch: Update to 0.28.3.
...
* gnu/packages/mail.scm (notmuch): Update to 0.28.3.
2019-03-10 18:30:51 +01:00
Marius Bakke
2c0cf9eec7
gnu: xapian: Update to 1.4.11.
...
* gnu/packages/search.scm (xapian, python-xapian-bindings): Update to 1.4.11.
2019-03-10 18:30:51 +01:00
Marius Bakke
511930c294
gnu: libmspack: Update to 0.10.1.
...
* gnu/packages/compression.scm (libmspack): Update to 0.10.1.
2019-03-10 18:30:50 +01:00
Marius Bakke
755226e9c2
gnu: python-dask: Update to 1.1.4.
...
* gnu/packages/python-xyz.scm (python-dask): Update to 1.1.4.
2019-03-10 18:30:50 +01:00
Marius Bakke
f1fff66be5
gnu: elogind: Update to 239.4.
...
* gnu/packages/freedesktop.scm (elogind): Update to 239.4.
2019-03-10 18:30:50 +01:00
Tobias Geerinckx-Rice
6845ab5204
gnu: Import (gnu packages image) in (gnu packages scanner).
...
This is a follow-up to commit 10bd2889d2
.
* gnu/packages/scanner.scm: #:use-module (gnu packages image).
2019-03-10 17:12:16 +01:00
Tobias Geerinckx-Rice
10bd2889d2
gnu: sane-backends: Support PNG scanimage output.
...
* gnu/packages/scanner.scm (sane-backends)[inputs]: Add libpng.
2019-03-10 16:33:55 +01:00
Ricardo Wurmus
ca32afacf9
gnu: Add btanks.
...
* gnu/packages/games.scm (btanks): New variable.
2019-03-10 14:04:28 +01:00
Ricardo Wurmus
d7764d42e4
gnu: Add libsmpeg-with-sdl1.
...
* gnu/packages/video.scm (libsmpeg-with-sdl1): New variable.
(libsmpeg)[version]: Change to 0.4.5-401.
2019-03-10 14:04:28 +01:00
Ricardo Wurmus
8ada024ba6
gnu: Add 4dtris.
...
* gnu/packages/games.scm (4dtris): New variable.
2019-03-10 14:04:28 +01:00
Ricardo Wurmus
c06709b8a4
gnu: Add slingshot.
...
* gnu/packages/games.scm (slingshot): New variable.
2019-03-10 14:04:28 +01:00
Ricardo Wurmus
05487ed8e6
gnu: scons: Update to 3.0.4.
...
* gnu/packages/python-xyz.scm (scons): Update to 3.0.4.
[arguments]: Remove second instance of "imp.load_module" (bug 34236).
2019-03-10 14:04:28 +01:00
Tobias Geerinckx-Rice
4eb57ca883
gnu: Add opensmtpd-next.
...
* gnu/packages/mail.scm (opensmtpd-next): New public variable.
2019-03-10 13:37:18 +01:00
Tobias Geerinckx-Rice
380384e419
gnu: ibus: Update Unicode data to 12.0.0.
...
* gnu/packages/ibus.scm (ibus)[native-inputs]: Use versioned URLs for
Unicode data and update hashes.
2019-03-10 13:37:18 +01:00
Pierre Neidhardt
2b613a1a5d
gnu: hyperledger-fabric: Fix description, set supported system and parallel build.
...
* gnu/packages/hyperledger.scm (hyperledger-fabric)[description]: Rephrase
into something less marketing-ish.
[arguments]: Build with multiple jobs.
[supported-systems]: Support x86_64-linux only.
2019-03-09 12:30:24 +01:00
Ricardo Wurmus
7d4cab7473
gnu: Add openfst.
...
* gnu/packages/machine-learning.scm (openfst): New variable.
2019-03-09 10:43:37 +01:00
Pierre Neidhardt
983550692d
gnu: Add hyperledger-fabric.
...
* gnu/local.mk (hyperledger): New variable.
2019-03-09 10:15:46 +01:00
Ricardo Wurmus
2b0c755d19
gnu: gnome-shell: Update to 3.28.2.
...
* gnu/packages/gnome.scm (gnome-shell): Update to 3.28.2.
[source]: Update snippet.
[build-system]: Use meson-build-system.
[arguments]: Disable systemd; add build phases "fix-keysdir" and "pre-check";
remove "rebuild-css" phase; remove custom "install" phase; wrap also with
LD_LIBRARY_PATH.
[native-inputs]: Add desktop-file-utils, sassc, and xorg-server.
[inputs]: Remove readline.
2019-03-09 08:48:25 +01:00
Tobias Geerinckx-Rice
373abfb398
gnu: lynis: Update to 2.7.2.
...
* gnu/packages/admin.scm (lynis): Update to 2.7.2.
2019-03-09 02:33:31 +01:00
Tobias Geerinckx-Rice
7b957a3344
gnu: youtube-viewer: Update to "3.5.4.
...
* gnu/packages/video.scm (youtube-viewer): Update to "3.5.4.
2019-03-09 02:33:31 +01:00
Tobias Geerinckx-Rice
37fc44eab9
gnu: dovecot: Avoid unnecessary patching.
...
* gnu/packages/mail.scm (dovecot)[arguments]: Replace ‘pre-configure’
patching with custom ‘make install sysconfdir=…’.
2019-03-09 02:33:31 +01:00
Tobias Geerinckx-Rice
f762e49f28
gnu: dovecot: Indent arguments.
...
* gnu/packages/mail.scm (dovecot)[arguments]: C-M-q and tuck left.
2019-03-09 02:33:31 +01:00
Tobias Geerinckx-Rice
7969751f54
gnu: i3lock-color: Update to 2.12.c.
...
* gnu/packages/wm.scm (i3lock-color): Update to 2.12.c.
[inputs]: Add xcb-util-xrm.
2019-03-09 02:33:30 +01:00
Tobias Geerinckx-Rice
f45cc966ba
gnu: i3lock-color: Don't use unstable tarball.
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* gnu/packages/wm.scm (i3lock-color)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-09 02:33:30 +01:00
Tobias Geerinckx-Rice
a48db08afe
gnu: i3lock-fancy: Don't use unstable tarball.
...
* gnu/packages/wm.scm (i3lock-fancy)[source]: Use GIT-FETCH and
GIT-FILE-NAME.
2019-03-09 02:33:30 +01:00
Ludovic Courtès
d429878daf
activation: Shared system home directories are now 555 and root-owned.
...
Fixes <https://bugs.gnu.org/34788 >.
Reported by Jack Hill <jackhill@jackhill.us>.
Regression introduced by the combination of
8bb76f3d44
and
0ae735bcc8ff7fdc89d67b492bdee9091ee19e86: /var/empty would be 700 and
owned by one of the system accounts (thus inaccessible to others), and
/var/run/dbus would be 700 as well, thereby preventing D-Bus clients
from connecting to the daemon.
* gnu/build/activation.scm (duplicates): New procedure.
(activate-users+groups)[system-accounts]: New variable.
Use it. Make shared system account home directories #o555 and
root-owned.
* gnu/services/dbus.scm (dbus-activation): Make /var/run/dbus #o755.
* gnu/tests/base.scm (run-basic-test): Test the ownership and
permissions of /var/empty.
2019-03-08 23:21:59 +01:00
Ricardo Wurmus
74c2339fff
gnu: Add java-eclipse-jdt-compiler-apt.
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* gnu/packages/java.scm (java-eclipse-jdt-compiler-apt): New variable.
2019-03-08 23:18:56 +01:00
Ricardo Wurmus
8b6acb1f20
gnu: blast+: Update to 2.7.1.
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* gnu/packages/bioinformatics.scm (blast+): Update to 2.7.1.
[inputs]: Add lmdb.
[source]: Remove obsolete patch.
* gnu/package/patches/blast+-fix-makefile.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-03-08 23:00:07 +01:00
Ricardo Wurmus
f87dcb4d75
gnu: Add texlive-latex-pdfx.
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* gnu/packages/tex.scm (texlive-latex-pdfx): New variable.
2019-03-08 21:49:25 +01:00
Ricardo Wurmus
cafd4d387b
gnu: Add texlive-latex-xmpincl.
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* gnu/packages/tex.scm (texlive-latex-xmpincl): New variable.
2019-03-08 21:48:19 +01:00
Ricardo Wurmus
847768b9cc
gnu: Add translate2geda.
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* gnu/packages/engineering.scm (translate2geda): New variable.
2019-03-08 21:45:29 +01:00
Ricardo Wurmus
a734da8675
gnu: Add rkrlv2.
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* gnu/packages/music.scm (rkrlv2): New variable.
2019-03-08 21:02:49 +01:00
Danny Milosavljevic
eb6ef893e8
gnu: fc-host-tools: Update to 10.
...
* gnu/packages/embedded.scm (fc-host-tools): Update to 10.
[arguments]<:make-flags>: Change INSTBIN to INSTALL_PREFIX.
2019-03-08 19:33:04 +01:00
Efraim Flashner
606c198788
gnu: crawl: Find all the included headers.
...
* gnu/packages/games.scm (crawl)[arguments]: Add a custom phase to
change the path for some headers.
2019-03-08 17:22:29 +02:00
Efraim Flashner
b89284407f
gnu: crawl: Don't assume system architecture.
...
This allows crawl to build on non-Intel architectures.
* gnu/packages/games.scm (crawl)[arguments]: Add a custom phase to
remove x86* specific CFLAGS.
2019-03-08 17:22:29 +02:00
Efraim Flashner
fc7d6bc60d
gnu: crawl: Build with python3-wrapper.
...
* gnu/packages/games.scm (crawl)[native-inputs replace python with
python-wrapper.
[arguments]: Remove custom 'patch-python phase.
2019-03-08 17:22:26 +02:00
Vagrant Cascadian
fb0aeaacea
gnu: u-boot: Remove openssl input.
...
Fixes <https://bugs.gnu.org/34717 >.
* gnu/packages/bootloaders (u-boot): Remove openssl from native-inputs.
(u-boot-tools): Disable FIT_SIGNATURES in tests.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-03-08 12:31:37 +01:00
Rutger Helling
75f0bda71a
gnu: flatpak: Add more dependencies.
...
* gnu/packages/package-management.scm (flatpak)[propagated-inputs]: Add
"glib-networking", "gnupg" and "gsettings-desktop-schemas".
2019-03-08 11:50:56 +01:00
Ricardo Wurmus
daeb3cd98c
gnu: r-genelendatabase: Update to 1.18.0.
...
* gnu/packages/bioconductor.scm (r-genelendatabase): Update to 1.18.0.
2019-03-08 09:30:00 +01:00
Ricardo Wurmus
183b6575e7
gnu: r-mzr: Update to 2.16.2.
...
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.16.2.
[inputs]: Replace "boost" with "boost-for-mysql".
2019-03-08 09:14:01 +01:00
Ricardo Wurmus
6453d7aecc
gnu: r-gviz: Update to 1.26.5.
...
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.26.5.
2019-03-08 09:14:01 +01:00
Ricardo Wurmus
101dcc29d3
gnu: r-ensembldb: Update to 2.6.7.
...
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.6.7.
2019-03-08 09:14:01 +01:00
Ricardo Wurmus
d3713237c5
gnu: r-annotationhub: Update to 2.14.4.
...
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.14.4.
2019-03-08 09:14:01 +01:00
Ricardo Wurmus
53e7f028ed
gnu: r-rhtslib: Update to 1.14.1.
...
* gnu/packages/bioinformatics.scm (r-rhtslib): Update to 1.14.1.
2019-03-08 09:14:01 +01:00
Ricardo Wurmus
d86b9eca56
gnu: r-genomicfeatures: Update to 1.34.4.
...
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.34.4.
2019-03-08 09:14:01 +01:00
Ricardo Wurmus
d493043daf
gnu: r-rtracklayer: Update to 1.42.2.
...
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.42.2.
2019-03-08 09:14:01 +01:00
Ricardo Wurmus
57f40dc220
gnu: r-rsamtools: Update to 1.34.1.
...
* gnu/packages/bioinformatics.scm (r-rsamtools): Update to 1.34.1.
2019-03-08 09:14:00 +01:00
Ricardo Wurmus
58209b1e21
gnu: r-biocparallel: Update to 1.16.6.
...
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.16.6.
2019-03-08 09:14:00 +01:00
Ricardo Wurmus
cd43ae3fd6
gnu: r-variantannotation: Update to 1.28.11.
...
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.28.11.
2019-03-08 09:14:00 +01:00
Ricardo Wurmus
fff11bccc6
gnu: r-genomeinfodb: Update to 1.18.2.
...
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.18.2.
2019-03-08 09:14:00 +01:00
Ricardo Wurmus
8972989e10
gnu: r-dexseq: Update to 1.28.2.
...
* gnu/packages/bioinformatics.scm (r-dexseq): Update to 1.28.2.
2019-03-08 09:14:00 +01:00
Tobias Geerinckx-Rice
792d3ed7eb
gnu: man-pages: Update to 5.00.
...
* gnu/packages/man.scm (man-pages): Update to 5.00.
[source]: Re-format.
2019-03-08 01:35:42 +01:00
Tobias Geerinckx-Rice
13b1fb5c92
gnu: dovecot: Update to 2.3.5.
...
* gnu/packages/mail.scm (dovecot): Update to 2.3.5.
[arguments]: Patch more tests in ‘patch-file-names’ phase, renamed from
‘patch-other-file-names’.
2019-03-08 01:34:41 +01:00
Tobias Geerinckx-Rice
2fa1a3a808
gnu: dovecot: Don't use NAME in source URI.
...
* gnu/packages/mail.scm (dovecot)[source]: Hard-code NAME.
2019-03-08 01:34:40 +01:00
Ricardo Wurmus
933dad9156
gnu: Add mruby.
...
* gnu/packages/ruby.scm (mruby): New variable.
2019-03-08 00:07:45 +01:00
Ricardo Wurmus
20662a3020
gnu: r-ggmap: Update to 3.0.0.
...
* gnu/packages/cran.scm (r-ggmap): Update to 3.0.0.
[propagated-inputs]: Add r-bitops, r-dplyr, r-glue, r-httr, r-magrittr,
r-purrr, r-stringr, r-tibble, and r-tidyr; remove r-geosphere, r-mapproj,
r-proto, and r-reshape2.
2019-03-07 23:52:44 +01:00
Ricardo Wurmus
8f37f53837
gnu: r-readxl: Update to 1.3.0.
...
* gnu/packages/cran.scm (r-readxl): Update to 1.3.0.
2019-03-07 23:52:44 +01:00
Ricardo Wurmus
f544ab3379
gnu: r-sys: Update to 3.0.
...
* gnu/packages/cran.scm (r-sys): Update to 3.0.
2019-03-07 23:52:44 +01:00
Ricardo Wurmus
790db519f4
gnu: r-servr: Update to 0.13.
...
* gnu/packages/cran.scm (r-servr): Update to 0.13.
2019-03-07 23:52:44 +01:00
Ricardo Wurmus
e89d54278d
gnu: r-flextable: Update to 0.5.1.
...
* gnu/packages/cran.scm (r-flextable): Update to 0.5.1.
[propagated-inputs]: Add r-data-table, r-magick, and r-rlang; remove r-r6 and
r-stringr.
2019-03-07 23:52:44 +01:00
Ricardo Wurmus
e190d9af6c
gnu: r-proxy: Update to 0.4-23.
...
* gnu/packages/cran.scm (r-proxy): Update to 0.4-23.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus
bef78244de
gnu: r-haven: Update to 2.1.0.
...
* gnu/packages/cran.scm (r-haven): Update to 2.1.0.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus
59c513422c
gnu: r-emdbook: Update to 1.3.11.
...
* gnu/packages/cran.scm (r-emdbook): Update to 1.3.11.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus
937e15571c
gnu: r-rmysql: Update to 0.10.17.
...
* gnu/packages/cran.scm (r-rmysql): Update to 0.10.17.
[native-inputs]: Remove pkg-config.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus
2170a36c3b
gnu: r-gower: Update to 0.2.0.
...
* gnu/packages/cran.scm (r-gower): Update to 0.2.0.
[native-inputs]: Remove r-knitr.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus
6e4a9b8365
gnu: r-ggsignif: Update to 0.5.0.
...
* gnu/packages/cran.scm (r-ggsignif): Update to 0.5.0.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus
532b359865
gnu: r-jomo: Update to 2.6-7.
...
* gnu/packages/cran.scm (r-jomo): Update to 2.6-7.
2019-03-07 23:52:43 +01:00
Ricardo Wurmus
d2cd541cc7
gnu: r-mice: Update to 3.4.0.
...
* gnu/packages/cran.scm (r-mice): Update to 3.4.0.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus
22777c8657
gnu: r-xfun: Update to 0.5.
...
* gnu/packages/cran.scm (r-xfun): Update to 0.5.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus
87bb1b8c9e
gnu: r-metap: Update to 1.1.
...
* gnu/packages/cran.scm (r-metap): Update to 1.1.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus
d8787b3387
gnu: r-ifultools: Update to 2.0-5.
...
* gnu/packages/cran.scm (r-ifultools): Update to 2.0-5.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus
cb40b6eb9b
gnu: r-radiant-data: Update to 0.9.9.
...
* gnu/packages/cran.scm (r-radiant-data): Update to 0.9.9.
[propagated-inputs]: Add r-stringi; remove r-summarytools.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus
00fb320392
gnu: r-later: Update to 0.8.0.
...
* gnu/packages/cran.scm (r-later): Update to 0.8.0.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus
8b2c80b8a3
gnu: r-vim: Update to 4.8.0.
...
* gnu/packages/cran.scm (r-vim): Update to 4.8.0.
[propagated-inputs]: Add r-ranger.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus
b9b1041324
gnu: r-fnn: Update to 1.1.3.
...
* gnu/packages/cran.scm (r-fnn): Update to 1.1.3.
2019-03-07 23:52:42 +01:00
Ricardo Wurmus
ea010aa31e
gnu: r-arules: Update to 1.6-3.
...
* gnu/packages/cran.scm (r-arules): Update to 1.6-3.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus
f5ce1dcce2
gnu: r-zip: Update to 2.0.0.
...
* gnu/packages/cran.scm (r-zip): Update to 2.0.0.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus
bbe9421174
gnu: r-maptools: Update to 0.9-5.
...
* gnu/packages/cran.scm (r-maptools): Update to 0.9-5.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus
d3f22f0aea
gnu: r-reticulate: Update to 1.11.1.
...
* gnu/packages/cran.scm (r-reticulate): Update to 1.11.1.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus
fd1a17a522
gnu: r-officer: Update to 0.3.3.
...
* gnu/packages/cran.scm (r-officer): Update to 0.3.3.
[propagated-inputs]: Add r-rlang.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus
7754557090
gnu: r-prediction: Update to 0.3.6.2.
...
* gnu/packages/cran.scm (r-prediction): Update to 0.3.6.2.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus
3d5bcae0c2
gnu: r-abjutils: Update to 0.2.3.
...
* gnu/packages/cran.scm (r-abjutils): Update to 0.2.3.
[propagated-inputs]: Add r-furrr, r-future, r-readr, and r-rlang; remove
r-plyr.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus
1007b1b6d2
gnu: r-slam: Update to 0.1-45.
...
* gnu/packages/cran.scm (r-slam): Update to 0.1-45.
2019-03-07 23:52:41 +01:00
Ricardo Wurmus
a431c38166
gnu: r-hash: Update to 2.2.6.1.
...
* gnu/packages/cran.scm (r-hash): Update to 2.2.6.1.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus
a6a87db8ce
gnu: r-dvmisc: Update to 1.1.3.
...
* gnu/packages/cran.scm (r-dvmisc): Update to 1.1.3.
[propagated-inputs]: Add r-cubature, r-data-table, r-dplyr, r-ggplot2,
r-mvtnorm, r-pracma, r-purrr, and r-survey.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus
5093cbdc04
gnu: r-summarytools: Update to 0.9.2.
...
* gnu/packages/cran.scm (r-summarytools): Update to 0.9.2.
[propagated-inputs]: Add r-checkmate, r-dplyr, r-magick, and r-tidyr.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus
b1f39e8c38
gnu: r-multcomp: Update to 1.4-10.
...
* gnu/packages/cran.scm (r-multcomp): Update to 1.4-10.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus
e0f861649c
gnu: r-emmeans: Update to 1.3.3.
...
* gnu/packages/cran.scm (r-emmeans): Update to 1.3.3.
[propagated-inputs]: Add r-numderiv.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus
e2fee46f04
gnu: r-afex: Update to 0.23-0.
...
* gnu/packages/cran.scm (r-afex): Update to 0.23-0.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus
f18ca07eef
gnu: r-lmertest: Update to 3.1-0.
...
* gnu/packages/cran.scm (r-lmertest): Update to 3.1-0.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus
91f0b745f6
gnu: r-ks: Update to 1.11.4.
...
* gnu/packages/cran.scm (r-ks): Update to 1.11.4.
[propagated-inputs]: Remove r-misc3d.
2019-03-07 23:52:40 +01:00
Ricardo Wurmus
0b14b100a2
gnu: r-tidytree: Update to 0.2.4.
...
* gnu/packages/cran.scm (r-tidytree): Update to 0.2.4.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus
4bc5d45144
gnu: r-bigrquery: Update to 1.1.0.
...
* gnu/packages/cran.scm (r-bigrquery): Update to 1.1.0.
[propagated-inputs]: Add r-bit64.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus
8a05d17037
gnu: r-gmp: Update to 0.5-13.4.
...
* gnu/packages/cran.scm (r-gmp): Update to 0.5-13.4.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus
7706a98cda
gnu: r-huge: Update to 1.3.0.
...
* gnu/packages/cran.scm (r-huge): Update to 1.3.0.
[propagated-inputs]: Add r-rcpp and r-rcppeigen; remove r-lattice.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus
f59cdeaf25
gnu: r-igraph: Update to 1.2.4.
...
* gnu/packages/graph.scm (r-igraph): Update to 1.2.4.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus
ed494a0acd
gnu: r-dplyr: Update to 0.8.0.1.
...
* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.0.1.
[native-inputs]: Move r-rcpp and r-bh from here...
[propagated-inputs]: ...to here; remove r-bindrcpp.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus
6caf80fbaf
gnu: r-lme4: Update to 1.1-21.
...
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-21.
[native-inputs]: Move r-rcpp and r-rcppeigen from here...
[propagated-inputs]: ...to here; add r-boot.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus
34a98f79d7
gnu: r-forcats: Update to 0.4.0.
...
* gnu/packages/statistics.scm (r-forcats): Update to 0.4.0.
[propagated-inputs]: Add r-ellipsis.
2019-03-07 23:52:39 +01:00
Ricardo Wurmus
6a0a2342dd
gnu: r-r6: Update to 2.4.0.
...
* gnu/packages/statistics.scm (r-r6): Update to 2.4.0.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
4b16c00e9a
gnu: r-formatr: Update to 1.6.
...
* gnu/packages/statistics.scm (r-formatr): Update to 1.6.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
1f7a76a0c1
gnu: r-evaluate: Update to 0.13.
...
* gnu/packages/statistics.scm (r-evaluate): Update to 0.13.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
48a4b775b9
gnu: r-mgcv: Update to 1.8-27.
...
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-27.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
71fe7f9d21
gnu: r-stringi: Update to 1.3.1.
...
* gnu/packages/statistics.scm (r-stringi): Update to 1.3.1.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
605fcf8a23
gnu: r-stringr: Update to 1.4.0.
...
* gnu/packages/statistics.scm (r-stringr): Update to 1.4.0.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
17abcd521a
gnu: r-ranger: Update to 0.11.2.
...
* gnu/packages/statistics.scm (r-ranger): Update to 0.11.2.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
9066534d4c
gnu: r-openssl: Update to 1.2.2.
...
* gnu/packages/statistics.scm (r-openssl): Update to 1.2.2.
2019-03-07 23:52:38 +01:00
Ricardo Wurmus
a1d9387d82
gnu: r-catools: Update to 1.17.1.2.
...
* gnu/packages/statistics.scm (r-catools): Update to 1.17.1.2.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
4fadef3ba0
gnu: r-xml: Update to 3.98-1.19.
...
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.19.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
bc7895e1cf
gnu: r-flexmix: Update to 2.3-15.
...
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-15.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
6be62a5a72
gnu: r-irlba: Update to 2.3.3.
...
* gnu/packages/statistics.scm (r-irlba): Update to 2.3.3.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
b22a20405a
gnu: r-registry: Update to 0.5-1.
...
* gnu/packages/statistics.scm (r-registry): Update to 0.5-1.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
3db71d065c
gnu: r-r-utils: Update to 2.8.0.
...
* gnu/packages/statistics.scm (r-r-utils): Update to 2.8.0.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
21886e730b
gnu: r-r-rsp: Update to 0.43.1.
...
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.43.1.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
ed4100dc96
gnu: r-mvtnorm: Update to 1.0-10.
...
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-10.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
ebd37b49f9
gnu: r-tidyr: Update to 0.8.3.
...
* gnu/packages/statistics.scm (r-tidyr): Update to 0.8.3.
2019-03-07 23:52:37 +01:00
Ricardo Wurmus
84840deb95
gnu: r-purrr: Update to 0.3.1.
...
* gnu/packages/statistics.scm (r-purrr): Update to 0.3.1.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
b58220f599
gnu: r-pbapply: Update to 1.4-0.
...
* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-0.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
e51096b2ea
gnu: r-vgam: Update to 1.1-1.
...
* gnu/packages/statistics.scm (r-vgam): Update to 1.1-1.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
aeb11b7549
gnu: r-ggthemes: Update to 4.1.0.
...
* gnu/packages/statistics.scm (r-ggthemes): Update to 4.1.0.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
d235cf7268
gnu: r-shiny: Update to 1.2.0.
...
* gnu/packages/cran.scm (r-shiny): Update to 1.2.0.
[arguments]: Adjust processing of minified JavaScript.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
83ef38b038
gnu: r-epi: Update to 2.35.
...
* gnu/packages/cran.scm (r-epi): Update to 2.35.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
75cbc80037
gnu: r-network: Update to 1.14-377.
...
* gnu/packages/cran.scm (r-network): Update to 1.14-377.
[propagated-inputs]: Add r-magrittr and r-tibble.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
fadc49c6e5
gnu: r-vegan: Update to 2.5-4.
...
* gnu/packages/cran.scm (r-vegan): Update to 2.5-4.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
d1c2fd8eeb
gnu: r-future-apply: Update to 1.2.0.
...
* gnu/packages/cran.scm (r-future-apply): Update to 1.2.0.
2019-03-07 23:52:36 +01:00
Ricardo Wurmus
6e8b38d3e8
gnu: Add r-furrr.
...
* gnu/packages/cran.scm (r-furrr): New variable.
2019-03-07 23:52:35 +01:00
Ricardo Wurmus
f0bff69873
gnu: Add r-survey.
...
* gnu/packages/cran.scm (r-survey): New variable.
2019-03-07 23:52:35 +01:00
Ricardo Wurmus
dab3e92c94
gnu: Add r-magick.
...
* gnu/packages/cran.scm (r-magick): New variable.
2019-03-07 23:52:35 +01:00
Ricardo Wurmus
3f22a115bd
gnu: Add r-ellipsis.
...
* gnu/packages/cran.scm (r-ellipsis): New variable.
2019-03-07 23:52:35 +01:00
Pierre Neidhardt
d748cb5f47
gnu: Add autorandr.
...
* gnu/packages/xdisorg.scm (autorandr): New variable.
2019-03-07 22:23:38 +01:00
Julien Lepiller
945723be97
gnu: php: Update to 7.3.3.
...
* gnu/packages/php.scm (php): Update to 7.3.3.
2019-03-07 21:18:30 +01:00
Efraim Flashner
dcf4d01f30
gnu: libmicrohttpd: Enable parallel tests.
...
* gnu/packages/gnunet.scm (libmicrohttpd)[arguments]: Don't disable
parallel tests.
2019-03-07 22:00:53 +02:00
Efraim Flashner
c4bfce994e
gnu: libmicrohttpd: Update to 0.9.63.
...
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.63.
[arguments]: Remove custom phase to add missing LDFLAGS.
2019-03-07 22:00:53 +02:00
Efraim Flashner
0ef54303f3
gnu: c-graph: Update to 2.0.1.
...
* gnu/packages/maths.scm (c-graph): Update to 2.0.1.
2019-03-07 22:00:52 +02:00
Ludovic Courtès
0ae735bcc8
activation: Build account databases with (gnu build accounts).
...
* gnu/build/activation.scm (enumerate, current-users, current-groups)
(add-group, add-user, modify-user, ensure-user): Remove.
(activate-users+groups)[touch, activate-user]: Remove.
[make-home-directory]: New procedure.
Rewrite in terms of 'user+group-databases', 'write-group', etc.
* gnu/build/install.scm (directives): Remove "/root".
* gnu/system/shadow.scm (account-activation): Remove (setenv "PATH" ...)
expression, which is now unneeded.
2019-03-07 20:05:09 +01:00
Ludovic Courtès
ec600e4544
Add (gnu build accounts).
...
* gnu/build/accounts.scm, tests/accounts.scm: New files.
* Makefile.am (SCM_TESTS): Add tests/accounts.scm.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add build/accounts.scm.
2019-03-07 20:05:09 +01:00
Ludovic Courtès
6061d01512
activation: Operate on <user-account> and <user-group> records.
...
* gnu/system/accounts.scm (sexp->user-group, sexp->user-account): New
procedures.
* gnu/system/shadow.scm (account-activation): Call them in the arguments
to 'activate-users+groups'.
(account-shepherd-service): Likewise.
* gnu/build/activation.scm (activate-users+groups): Expect a list of
<user-account> and a list of <user-group>. Replace uses of 'match' on
tuples with calls to record accessors.
(activate-user-home): Likewise.
2019-03-07 20:05:09 +01:00
Ludovic Courtès
f6f67b87c0
system: Add (gnu system accounts).
...
The (gnu system accounts) module is meant to be used both on the build-
and on the host-side.
* gnu/system/shadow.scm <top level>: Call 'default-shell'.
(<user-account>, <user-group>): Move to...
* gnu/system/accounts.scm: ... here. New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add system/accounts.scm.
2019-03-07 20:04:02 +01:00
Pierre Neidhardt
b60e9fb82f
gnu: fuseiso: Fix typo in description.
...
* gnu/packages/linux.scm (fuseiso)[description]: Fix typo.
2019-03-07 17:12:46 +01:00
Tobias Geerinckx-Rice
1e1142d8cb
gnu: Add nullmailer.
...
* gnu/packages/mail.scm (nullmailer): New public variable.
2019-03-07 15:39:46 +01:00
Ricardo Wurmus
4d0e085bea
gnu: gnome-settings-daemon: Ensure RUNPATH contains library subdir.
...
* gnu/packages/gnome.scm (gnome-settings-daemon)[arguments]: Pass configure
flag to add $out/lib/gnome-settings-daemon-3.0 to RUNPATH.
2019-03-07 13:44:25 +01:00
Ricardo Wurmus
34c44a34ab
gnu: eog: Ensure RUNPATH contains output library directory.
...
* gnu/packages/gnome.scm (eog)[arguments]: Pass configure flag to add
$out/lib/eog to RUNPATH.
2019-03-07 13:44:25 +01:00
Ricardo Wurmus
a6d378e2e7
gnu: cups-filters: Fix build with newer version of poppler.
...
* gnu/packages/cups.scm (cups-filters)[arguments]: Add build phase
"patch-for-poppler".
2019-03-07 13:44:25 +01:00
Ricardo Wurmus
294ff39d27
gnu: dconf-editor: Update to 3.28.0.
...
* gnu/packages/gnome.scm (dconf-editor): Update to 3.28.0.
[build-system]: Use meson-build-system.
[native-inputs]: Add gtk+:bin and vala.
2019-03-07 13:44:25 +01:00
Ricardo Wurmus
9f475e3c3f
gnu: network-manager-applet: Update to 1.8.14.
...
* gnu/packages/gnome.scm (network-manager-applet): Update to 1.8.14.
2019-03-07 13:44:25 +01:00
Ricardo Wurmus
0310eb966b
gnu: network-manager-openvpn: Update to 1.8.4.
...
* gnu/packages/gnome.scm (network-manager-openvpn): Update to 1.8.4.
2019-03-07 13:44:25 +01:00
Ricardo Wurmus
fc984c8596
gnu: gnome-online-accounts: Update to 3.28.0.
...
* gnu/packages/gnome.scm (gnome-online-accounts): Update to 3.28.0.
2019-03-07 13:44:25 +01:00
Ricardo Wurmus
bb10e7c817
gnu: evolution-data-server: Update to 3.28.3.
...
* gnu/packages/gnome.scm (evolution-data-server): Update to 3.28.3.
2019-03-07 13:44:25 +01:00
Ricardo Wurmus
0a76f2bd3b
gnu: gdm: Update to 3.28.2.
...
* gnu/packages/gnome.scm (gdm): Update to 3.28.2.
2019-03-07 13:44:24 +01:00
Ricardo Wurmus
59dac02602
gnu: gnome-control-center: Update to 3.28.2.
...
* gnu/packages/gnome.scm (gnome-control-center): Update to 3.28.2.
[build-system]: Use meson-build-system.
[arguments]: Add configure flags.
[native-inputs]: Add gkt+:bin.
2019-03-07 13:44:24 +01:00
Ricardo Wurmus
caf6c3637b
gnu: nautilus: Update to 3.28.1.
...
* gnu/packages/gnome.scm (nautilus): Update to 3.28.1.
[inputs]: Add gexiv2.
2019-03-07 13:44:24 +01:00
Ricardo Wurmus
fd3b117173
gnu: gnome-bluetooth: Update to 3.28.0.
...
* gnu/packages/gnome.scm (gnome-bluetooth): Update to 3.28.0.
[build-system]: Use meson-build-system.
[native-inputs]: Add gtk+:bin.
2019-03-07 13:44:24 +01:00
Ricardo Wurmus
c8bdf589c9
gnu: tracker: Update to 2.0.4.
...
* gnu/packages/gnome.scm (tracker): Update to 2.0.4.
[arguments]: Add phases "disable-broken-tests" and "pre-check"; enable tests.
[inputs]: Remove nettle, add python.
2019-03-07 13:44:24 +01:00
Ricardo Wurmus
8356aefafc
gnu: gnome-screenshot: Update to 3.26.0.
...
* gnu/packages/gnome.scm (gnome-screenshot): Update to 3.26.0.
[build-system]: Use meson-build-system.
[native-inputs]: Add gtk+:bin, desktop-file-utils, and appstream-glib.
2019-03-07 13:43:17 +01:00
Ricardo Wurmus
80d1e4c0f7
gnu: gnome-clocks: Update to 3.28.0.
...
* gnu/packages/gnome.scm (gnome-clocks): Update to 3.28.0.
2019-03-07 13:43:17 +01:00
Ricardo Wurmus
9f3c6c8825
gnu: gnome-todo: Update to 3.28.1.
...
* gnu/packages/gnome.scm (gnome-todo): Update to 3.28.1.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/patches/gnome-todo-libical-compat.patch: Remove file.
2019-03-07 13:43:17 +01:00
Ricardo Wurmus
a286b5ebda
gnu: gnome-calendar: Update to 3.28.2.
...
* gnu/packages/gnome.scm (gnome-calendar): Update to 3.28.2.
[inputs]: Add libdazzle, libgweather, and geoclue.
2019-03-07 13:42:30 +01:00
Ricardo Wurmus
100f625b83
gnu: gnome-shell-extensions: Update to 3.28.1.
...
* gnu/packages/gnome.scm (gnome-shell-extensions): Update to 3.28.1.
[build-system]: Use meson-build-system.
[arguments]: Adjust.
2019-03-07 13:42:30 +01:00
Ricardo Wurmus
4a3f6e02a1
gnu: libgnomekbd: Update to 3.26.0.
...
* gnu/packages/gnome.scm (libgnomekbd): Update to 3.26.0.
2019-03-07 13:42:30 +01:00
Ricardo Wurmus
112e908323
gnu: gnome-calculator: Update to 3.28.2.
...
* gnu/packages/gnome.scm (gnome-calculator): Update to 3.28.2.
[inputs]: Add glib and libxml2; replace gtksourceview with gtksourceview-3.
2019-03-07 13:42:30 +01:00
Ricardo Wurmus
c60063ea56
gnu: gucharmap: Update to 10.0.4.
...
* gnu/packages/gnome.scm (gucharmap): Update to 10.0.4.
[arguments]: Add phase "prepare-unicode-data".
[native-inputs]: Add unicode files.
2019-03-07 13:42:30 +01:00
Ricardo Wurmus
4985d9aa93
gnu: gnome-system-monitor: Update to 3.28.2.
...
* gnu/packages/gnome.scm (gnome-system-monitor): Update to 3.28.2.
[native-inputs]: Add polkit.
[inputs]: Add libwnck.
2019-03-07 13:42:30 +01:00
Ricardo Wurmus
84548bd7fa
gnu: python-pyatspi: Update to 2.26.0.
...
* gnu/packages/gnome.scm (python-pyatspi): Update to 2.26.0.
2019-03-07 13:42:30 +01:00
Ricardo Wurmus
5055d385ff
gnu: mutter: Update to 3.28.2.
...
* gnu/packages/gnome.scm (mutter): Update to 3.28.2.
2019-03-07 13:42:30 +01:00
Ricardo Wurmus
f8e2b57781
gnu: zenity: Update to 3.28.1.
...
* gnu/packages/gnome.scm (zenity): Update to 3.28.1.
2019-03-07 13:42:30 +01:00
Ricardo Wurmus
df27807185
gnu: gnome-session: Update to 3.28.1.
...
* gnu/packages/gnome.scm (gnome-session): Update to 3.28.1.
[build-system]: Use meson-build-system.
[arguments]: Adjust "pre-configure" phase; update configure flags.
[native-inputs]: Add libxml2, docbook-xsl, docbook-xml, and xmlto.
2019-03-07 13:42:30 +01:00
Ricardo Wurmus
45f80fce92
gnu: network-manager: Update to 1.10.10.
...
* gnu/packages/gnome.scm (network-manager): Update to 1.10.10.
[arguments]: Add phase "delete-failing-tests"; use INVOKE in the install
phase.
2019-03-07 13:42:30 +01:00
Ricardo Wurmus
6a19f03e8b
gnu: cheese: Propagate more inputs.
...
* gnu/packages/gnome.scm (cheese)[inputs]: Move clutter, libcanberra, and
gstreamer from here...
[propagated-inputs]: ...to here.
2019-03-07 13:42:29 +01:00
Ricardo Wurmus
870a4e70ec
gnu: orca: Update to 3.28.1.
...
* gnu/packages/gnome.scm (orca): Update to 3.28.1.
2019-03-07 13:42:29 +01:00
Ricardo Wurmus
7271781738
gnu: gjs: Update to 1.52.3.
...
* gnu/packages/gnome.scm (gjs): Update to 1.52.3.
[propagated-inputs]: Replace mozjs-38 with mozjs-52.
2019-03-07 13:42:29 +01:00
Ricardo Wurmus
5dd12afcfb
gnu: devhelp: Update to 3.28.1.
...
* gnu/packages/gnome.scm (devhelp): Update to 3.28.1.
[native-inputs]: Add itstool.
2019-03-07 13:42:29 +01:00
Ricardo Wurmus
8c0fab36d8
gnu: gnome-mines: Update to 3.28.0.
...
* gnu/packages/gnome.scm (gnome-mines): Update to 3.28.0.
[build-system]: Use meson-build-system.
[arguments]: Delete "bootstrap" phase; remove "patch-/bin/true" phase.
[native-inputs]: Add glib:bin, vala, yeld, and appstream-glib; remove libxml2.
2019-03-07 13:42:29 +01:00
Ricardo Wurmus
d953418aee
gnu: librsvg: Build Vala bindings.
...
* gnu/packages/gnome.scm (librsvg)[arguments]: Enable building of Vala
bindings.
[native-inputs]: Add vala.
2019-03-07 13:42:29 +01:00
Ricardo Wurmus
0ab9f949da
gnu: gvfs: Update to 1.36.2.
...
* gnu/packages/gnome.scm (gvfs): Update to 1.36.2.
[arguments]: Add phase "remove-broken-autogen-script".
[native-inputs]: Add autoconf, automake, gettext-minimal, gtk-doc, and
libtool.
[inputs]: Add libimobiledevice.
2019-03-07 13:41:29 +01:00
Ricardo Wurmus
ab35cc6e5b
gnu: gnome-keyring: Update to 3.28.2.
...
* gnu/packages/gnome.scm (gnome-keyring): Update to 3.28.2.
[arguments]: Replace "pre-check" phase with "fix-/bin/sh-reference".
[inputs]: Add openssh.
2019-03-07 13:41:29 +01:00
Ricardo Wurmus
dd7a244614
gnu: libgnome-games-support: Update to 1.4.1.
...
* gnu/packages/gnome.scm (libgnome-games-support): Update to 1.4.1.
2019-03-07 13:41:29 +01:00
Ricardo Wurmus
b78f511817
gnu: libgudev: Update to 232.
...
* gnu/packages/gnome.scm (libgudev): Update to 232.
[arguments]: Add configure flags to cut recursive dependency.
2019-03-07 13:41:28 +01:00
Ricardo Wurmus
61fb581fbb
gnu: eog: Update to 3.28.2.
...
* gnu/packages/gnome.scm (eog): Update to 3.28.2.
[build-system]: Use meson-build-system.
[native-inptus]: Add gtk+:bin.
2019-03-07 13:41:28 +01:00
Ricardo Wurmus
1e9b19dd1f
gnu: totem-pl-parser: Update to 3.26.1.
...
* gnu/packages/gnome.scm (totem-pl-parser): Update to 3.26.1.
[build-system]: Use meson-build-system.
[inputs]: Move libarchive and libgcrypt from here...
[propagated-inputs]: ...to here.
2019-03-07 13:41:28 +01:00
Ricardo Wurmus
e644f9fa49
gnu: gnome-settings-daemon: Update to 3.28.1.
...
* gnu/packages/gnome.scm (gnome-settings-daemon): Update to 3.28.1.
[build-system]: Use meson-build-system.
[arguments]: Override udev rules directory with configure flags.
[native-inputs]: Add glib:bin.
[inputs]: Add alsa-lib, colord, and wayland.
2019-03-07 13:41:28 +01:00
Ricardo Wurmus
cf6cbc34f5
gnu: libgweather: Update to 3.28.2.
...
* gnu/packages/gnome.scm (libgweather): Update to 3.28.2.
[build-system]: Use meson-build-system.
[arguments]: Disable tests; adjust configure flags; remove custom build
phases.
[inputs]: Move libsoup and geocode-glib from here...
[propagated-inputs]: ...to here.
2019-03-07 13:41:28 +01:00
Ricardo Wurmus
a7dd0c02cc
gnu: geocode-glib: Update to 3.26.0.
...
* gnu/packages/gnome.scm (geocode-glib): Update to 3.26.0.
[build-system]: Use meson-build-system.
[arguments]: Enable tests; add phase "set-locales".
[native-inputs]: Add glibc-locales, gettext-minimal, and gtk-doc.
2019-03-07 13:41:28 +01:00
Ricardo Wurmus
83232ba2c8
gnu: five-or-more: Update to 3.28.0.
...
* gnu/packages/gnome.scm (five-or-more): Update to 3.28.0.
2019-03-07 13:41:28 +01:00
Ricardo Wurmus
c6571adb09
gnu: glade3: Update to 3.22.1.
...
* gnu/packages/gnome.scm (glade3): Update to 3.22.1.
2019-03-07 13:41:04 +01:00
Ricardo Wurmus
3b5d5b4a9f
gnu: adwaita-icon-theme: Update to 3.28.0.
...
* gnu/packages/gnome.scm (adwaita-icon-theme): Update to 3.28.0.
2019-03-07 13:41:04 +01:00
Ricardo Wurmus
934cc5691a
gnu: gsettings-desktop-schemas: Update to 3.28.0.
...
* gnu/packages/gnome.scm (gsettings-desktop-schemas): Update to 3.28.0.
2019-03-07 13:41:04 +01:00
Ricardo Wurmus
0daf0efbe6
gnu: gcr: Update to 3.28.0.
...
* gnu/packages/patches/gcr-disable-failing-tests.patch,
gnu/packages/patches/gcr-fix-collection-tests-to-work-with-gpg-21.patch:
Remove files.
* gnu/local.mk (dist_patch_DATA): Remove patches.
* gnu/packages/gnome.scm (gcr): Update to 3.28.0.
[arguments]: Add phase "disable-failing-tests"; rewrite "pre-check" phase.
[native-inputs]: Add libxml2.
2019-03-07 13:41:04 +01:00
Ricardo Wurmus
9863ce205d
gnu: gnome-desktop: Update to 3.28.2.
...
* gnu/packages/gnome.scm (gnome-desktop): Update to 3.28.2.
[inputs]: Add libseccomp.
2019-03-07 13:41:04 +01:00
Ricardo Wurmus
5ba1781915
gnu: libproxy: Remove network-manager.
...
This is necessary to break a dependency cycle.
* gnu/packages/networking.scm (libproxy)[inputs]: Remove network-manager.
2019-03-07 13:41:04 +01:00
Ricardo Wurmus
78ac232e79
gnu: gnome-maps: Update to 3.28.2.
...
* gnu/packages/geo.scm (gnome-maps): Update to 3.28.2.
2019-03-07 13:41:04 +01:00
Ricardo Wurmus
1258112a27
gnu: glibmm: Update to 2.56.0.
...
* gnu/packages/glib.scm (glibmm): Update to 2.56.0.
2019-03-07 13:41:04 +01:00
Ricardo Wurmus
b54c22898d
gnu: gedit: Use gtksourceview-3.
...
* gnu/packages/gnome.scm (gedit)[inputs]: Replace "gtksourceview" with
"gtksourceview-3".
2019-03-07 13:41:04 +01:00
Ricardo Wurmus
0a500745c7
gnu: file-roller: Update to 3.28.0.
...
* gnu/packages/gnome.scm (file-roller): Update to 3.28.0.
[build-system]: Use meson-build-system.
[native-inputs]: Add desktop-file-utils, gtk+:bin, and glib:bin.
[arguments]: Remove.
2019-03-07 13:41:04 +01:00
Ricardo Wurmus
2089bca52a
gnu: yelp-tools: Update to 3.28.0.
...
* gnu/packages/gnome.scm (yelp-tools): Update to 3.28.0.
2019-03-07 13:41:04 +01:00
Ricardo Wurmus
7c2139005b
gnu: yelp-xsl: Update to 3.28.0.
...
* gnu/packages/gnome.scm (yelp-xsl): Update to 3.28.0.
2019-03-07 13:41:04 +01:00
Ricardo Wurmus
ef7f084fe5
gnu: yelp: Update to 3.28.1.
...
* gnu/packages/gnome.scm (yelp): Update to 3.28.1.
2019-03-07 13:41:03 +01:00
Ricardo Wurmus
8c5b884c34
gnu: at-spi2-core: Update to 2.28.0.
...
* gnu/packages/gtk.scm (at-spi2-core): Update to 2.28.0.
[build-system]: Use meson-build-system.
[arguments]: Adjust configure-flags; add build phases: set-documentation-path,
prepare-doc-directory, move-documentation; move check phase after install.
[native-inputs]: Add gtk-doc and glib:bin.
2019-03-07 13:41:03 +01:00
Ricardo Wurmus
7a1bb44a5d
gnu: gtk-doc: Update to 1.28.
...
* gnu/packages/gtk.scm (gtk-doc): Update to 1.28.
2019-03-07 13:41:03 +01:00
Ricardo Wurmus
c5989b03ea
gnu: Add gtksourceview-3.
...
* gnu/packages/gtk.scm (gtksourceview-3): New variable.
2019-03-07 13:41:03 +01:00
Ricardo Wurmus
9dcb6fca41
gnu: gtksourceview: Update to 4.0.2.
...
* gnu/packages/gtk.scm (gtksourceview): Update to 4.0.2.
2019-03-07 13:41:03 +01:00
Ricardo Wurmus
3189fad217
gnu: neovim: Let build phase return #T.
...
* gnu/packages/vim.scm (neovim)[arguments]: Return #T from "patch-tic" phase.
2019-03-07 13:39:45 +01:00
Ricardo Wurmus
3b296475bf
gnu: cd-hit: Support longer sequences.
...
* gnu/packages/bioinformatics.scm (cd-hit)[arguments]: Pass MAX_SEQ to make
flags.
2019-03-07 13:38:01 +01:00
Ricardo Wurmus
237ee6f2b2
gnu: python2-fastlmm: Disable tests.
...
* gnu/packages/machine-learning.scm (python2-fastlmm)[arguments]: Disable
tests.
2019-03-07 13:37:58 +01:00
Rutger Helling
9fd6ad3e35
gnu: wireguard: Update to 0.0.20190227.
...
* gnu/packages/vpn.scm (wireguard): Update to 0.0.20190227.
[arguments]: Disable tests.
2019-03-07 12:23:43 +01:00
Rutger Helling
9cb4bda222
gnu: nftables: Update to 0.9.0.
...
* gnu/packages/linux.scm (nftables): Update to 0.9.0.
[arguments]: Add "--disable-man-doc" configure flag.
2019-03-07 12:08:21 +01:00
Kei Kebreau
ccf2446730
gnu: minetest: Update to 5.0.0.
...
* gnu/packages/games.scm (minetest-data, minetest): Update to 5.0.0.
2019-03-07 05:31:19 -05:00
Gábor Boskovits
0a10abf73e
gnu: neovim: Fix #34616 .
...
This fixes a segmentation fault in neovim, where an error return value
is passed in as a pointer.
* gnu/packages/vim.scm (neovim)[arguments](phases): Add 'patch-tic phase.
2019-03-07 11:08:31 +01:00
Rutger Helling
9776417246
gnu: vulkan-tools: Update to 1.1.102.
...
* gnu/packages/vulkan.scm (vulkan-tools): Update to 1.1.102.
[arguments]: Remove "-DBUILD_ICD=OFF" configure flag.
2019-03-07 10:42:27 +01:00
Gábor Boskovits
2702aa9136
gnu: unibilium: Update to 2.0.0.
...
* gnu/packages/terminal.scm (unibilium): Update to 2.0.0.
[native-inputs]: Add perl.
2019-03-07 09:48:03 +01:00
Tobias Geerinckx-Rice
abe6e670d3
gnu: sane-backends-minimal: Fix USB support.
...
* gnu/packages/scanner.scm (sane-backends-minimal)[inputs]: Replace
libusb-compat with libusb.
[arguments]: Disable tests that require USB access.
2019-03-07 02:13:26 +01:00
Mark H Weaver
274fa49100
gnu: linux-libre: Update to 5.0.
...
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.0.
(%linux-libre-hash): Update hash.
(%linux-libre-4.20-patches): Rename to ...
(%linux-libre-5.0-patches): ... this.
(linux-libre, linux-libre-arm-generic, linux-libre-arm-omap2plus):
Use %linux-libre-5.0-patches instead of %linux-libre-4.20-patches.
* gnu/packages/aux-files/linux-libre/4.20-arm.conf,
gnu/packages/aux-files/linux-libre/4.20-arm64.conf,
gnu/packages/aux-files/linux-libre/4.20-i686.conf,
gnu/packages/aux-files/linux-libre/4.20-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/5.0-arm.conf,
gnu/packages/aux-files/linux-libre/5.0-arm64.conf,
gnu/packages/aux-files/linux-libre/5.0-i686.conf,
gnu/packages/aux-files/linux-libre/5.0-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
2019-03-06 17:51:55 -05:00
Mark H Weaver
9870f3ec61
gnu: linux-libre@4.19: Update to 4.19.27.
...
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.27.
(%linux-libre-4.19-hash): Update hash.
2019-03-06 17:51:12 -05:00
Mark H Weaver
1b1a6c028b
gnu: linux-libre@4.14: Update to 4.14.105.
...
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.105.
(%linux-libre-4.14-hash): Update hash.
2019-03-06 17:50:21 -05:00
Mark H Weaver
7850fa891d
gnu: linux-libre@4.9: Update to 4.9.162.
...
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.162.
2019-03-06 17:49:26 -05:00
Ricardo Wurmus
fc240e7e05
gnu: synthv1: Update to 0.9.5.
...
* gnu/packages/music.scm (synthv1): Update to 0.9.5.
2019-03-06 22:26:07 +01:00
Ricardo Wurmus
6ef147bd1d
gnu: drumkv1: Update to 0.9.5.
...
* gnu/packages/music.scm (drumkv1): Update to 0.9.5.
2019-03-06 22:26:07 +01:00
Ricardo Wurmus
cf6195906c
gnu: samplv1: Update to 0.9.5.
...
* gnu/packages/music.scm (samplv1): Update to 0.9.5.
2019-03-06 22:26:07 +01:00
Ricardo Wurmus
4b159add6f
gnu: padthv1: Update to 0.9.5.
...
* gnu/packages/music.scm (padthv1): Update to 0.9.5.
2019-03-06 22:26:07 +01:00
Ricardo Wurmus
d935f69b11
gnu: yoshimi: Update to 1.5.10.2.
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* gnu/packages/music.scm (yoshimi): Update to 1.5.10.2.
2019-03-06 22:26:06 +01:00
Vagrant Cascadian
01d8a2a3d9
gnu: electron-cash: Update to 3.3.6.
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* gnu/packages/finance (electron-cash): Update to 3.3.6.
Signed-off-by: Leo Famulari <leo@famulari.name>
2019-03-06 16:06:26 -05:00
Vagrant Cascadian
307603dd88
gnu: electrum: Update to 3.3.4.
...
* gnu/packages/finance (electrum): Update to 3.3.4.
Signed-off-by: Leo Famulari <leo@famulari.name>
2019-03-06 16:06:26 -05:00
Vagrant Cascadian
11599cff1e
gnu: diffoscope: Update to 113.
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* gnu/packages/package-management (diffoscope): Update to 113.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-03-06 22:05:07 +01:00
Ricardo Wurmus
61e265d294
gnu: Add multitime.
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* gnu/packages/benchmark.scm (multitime): New variable.
2019-03-06 21:55:14 +01:00
Ricardo Wurmus
8035819f4c
gnu: r-org-mm-eg-db: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-mm-eg-db): ...to here.
2019-03-06 21:43:33 +01:00
Ricardo Wurmus
d56df35a25
gnu: r-org-hs-eg-db: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-hs-eg-db): ...to here.
2019-03-06 21:42:39 +01:00
Ricardo Wurmus
f8780e96ff
gnu: r-org-dm-eg-db: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-dm-eg-db): ...to here.
2019-03-06 21:41:48 +01:00
Ricardo Wurmus
3a08940e1a
gnu: r-org-ce-eg-db: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Move from here...
* gnu/packages/bioconductor.scm (r-org-ce-eg-db): ...to here.
2019-03-06 21:35:20 +01:00
Ricardo Wurmus
7bc5d1b0e1
gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
Move from here...
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene):
...to here.
2019-03-06 21:33:17 +01:00
Ricardo Wurmus
13dabd6947
gnu: r-bsgenome-dmelanogaster-ucsc-dm3: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-dmelanogaster-ucsc-dm3):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3):
...to here.
2019-03-06 21:31:41 +01:00
Ricardo Wurmus
0c792ffbd1
gnu: r-bsgenome-celegans-ucsc-ce10: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce10):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce10): ...to here.
2019-03-06 21:30:30 +01:00
Ricardo Wurmus
b7d93cf508
gnu: r-bsgenome-celegans-ucsc-ce6: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce6):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6): ...to here.
2019-03-06 21:29:20 +01:00
Ricardo Wurmus
c3adc83054
gnu: r-bsgenome-mmusculus-ucsc-mm10: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm10):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm10): ...to here.
2019-03-06 21:26:54 +01:00
Ricardo Wurmus
5acb9052cf
gnu: r-bsgenome-mmusculus-ucsc-mm9: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm9):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9): ...to here.
2019-03-06 21:25:18 +01:00
Ricardo Wurmus
fe0b76e215
gnu: r-bsgenome-hsapiens-ucsc-hg19: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-ucsc-hg19):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19): ...to here.
2019-03-06 21:23:42 +01:00
Ricardo Wurmus
40a6505711
gnu: r-bsgenome-hsapiens-1000genomes-hs37d5: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-1000genomes-hs37d5):
Move from here...
* gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-1000genomes-hs37d5):
...to here.
2019-03-06 21:23:20 +01:00
Ricardo Wurmus
66e35ce63b
gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): Move
from here...
* gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): ...to
here.
2019-03-06 21:16:33 +01:00
Ricardo Wurmus
bfb93b4889
gnu: r-geneplotter: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-geneplotter): Move from here...
* gnu/packages/bioconductor.scm (r-geneplotter): ...to here.
2019-03-06 21:13:38 +01:00
Ricardo Wurmus
9f8698ad1c
gnu: Add guile-stis-parser.
...
* gnu/packages/guile-xyz.scm (guile-stis-parser): New variable.
2019-03-06 21:07:49 +01:00
Ricardo Wurmus
3d13b448e5
gnu: r-copynumber: Move to (gnu packages bioconductor).
...
* gnu/packages/bioinformatics.scm (r-copynumber): Move from here...
* gnu/packages/bioconductor.scm (r-copynumber): ...to here.
2019-03-06 21:07:49 +01:00
Ricardo Wurmus
6aa896d82e
gnu: Update copyright headers.
...
This is a follow-up to commit 1fe9a36173
.
* gnu/packages/bioconductor.scm: Update copyright header to account for moved
package.
2019-03-06 21:07:49 +01:00
Efraim Flashner
d2b38df62e
gnu: font-gnu-unifont: Update to 12.0.01.
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* gnu/packages/fonts.scm (font-gnu-unifont): Update to 12.0.01.
2019-03-06 20:51:47 +02:00
Marius Bakke
7e0f4cb154
gnu: librsvg: Don't build librsvg-2.a.
...
* gnu/packages/gnome.scm (librsvg)[arguments]: Add #:configure-flags.
2019-03-06 18:34:13 +01:00
Tobias Geerinckx-Rice
393b55d5c7
gnu: cabextract: Don't use NAME in source URI.
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* gnu/packages/compression.scm (cabextract)[source]: Hard-code NAME.
2019-03-06 16:48:40 +01:00
Tobias Geerinckx-Rice
bde093c23d
gnu: cabextract: Update to 1.9.1.
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* gnu/packages/compression.scm (cabextract): Update to 1.9.1.
2019-03-06 16:48:39 +01:00
Tobias Geerinckx-Rice
8fadbc4bb3
gnu: lcov: Update to 1.14.
...
* gnu/packages/code.scm (lcov): Update to 1.14.
2019-03-06 16:48:39 +01:00
Marius Bakke
350b7f8a74
gnu: valgrind: Update to 3.14.0.
...
* gnu/packages/patches/valgrind-glibc-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/valgrind.scm (valgrind): Update to 3.14.0.
[supported-systems]: Add mips64el-linux.
2019-03-06 16:32:31 +01:00
Marius Bakke
f339df425e
Merge branch 'master' into staging
2019-03-06 16:31:58 +01:00
Marius Bakke
7016e62070
gnu: python-mako: Update home page.
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* gnu/packages/python-xyz.scm (python-mako)[home-page]: Use HTTPS.
2019-03-06 16:30:48 +01:00
Marius Bakke
dff79364cf
gnu: fuseiso: Fix typo.
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* gnu/packages/linux.scm (fuseiso)[synopsis]: s/imsages/images.
2019-03-06 16:30:48 +01:00
Marius Bakke
a9eeda20b4
gnu: valgrind: Add download mirror.
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* gnu/packages/valgrind.scm (valgrind)[source](uri): Add mirror.
2019-03-06 16:30:48 +01:00
Ricardo Wurmus
38502a7d13
gnu: bismark: Update to 0.20.1.
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* gnu/packages/bioinformatics.scm (bismark): Update to 0.20.1.
[source]: Remove obsolete snippet.
[arguments]: Add build phase "replace-plotly.js" and add requried modules;
adjust "install" phase.
[inputs]: Add perl-carp and perl-getopt-long.
[native-inputs]: Add plotly.js and uglify-js.
2019-03-06 16:26:23 +01:00
Pierre Neidhardt
1564e0fefa
gnu: Add fuseiso.
...
* gnu/packages/linux.scm (fuseiso): New variable.
2019-03-06 16:24:34 +01:00
Ricardo Wurmus
cb66fb101f
gnu: Add r-scde.
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* gnu/packages/bioinformatics.scm (r-scde): New variable.
2019-03-06 15:55:54 +01:00
Ricardo Wurmus
afeb10a056
gnu: Add bowtie1.
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* gnu/packages/bioinformatics.scm (bowtie1): New variable.
2019-03-06 15:32:45 +01:00
Kei Kebreau
5b8f892872
gnu: octave, octave-cli: Update to 5.1.0.
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* gnu/packages/maths.scm (octave, octave-cli): Update to 5.1.0.
2019-03-06 09:17:33 -05:00
Kei Kebreau
e366521a94
gnu: crawl, crawl-tiles: Update to 0.23.1.
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* gnu/packages/games.scm (crawl, crawl-tiles): Update to 0.23.1.
[native-inputs]: Add python and python-pyyaml.
[arguments]: Add 'patch-python' phase, modify the 'check' phase and move the
'check' phase back after the 'build' phase.
2019-03-06 09:17:24 -05:00
Ricardo Wurmus
5bb674a0cd
gnu: perl-czplib: Fix installation directory.
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* gnu/packages/perl.scm (perl-czplib)[arguments]: Fix installation directory.
2019-03-06 15:05:38 +01:00
Ricardo Wurmus
5531782d1c
gnu: Add guile-studio.
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* gnu/packages/guile-xyz.scm (guile-studio): New variable.
2019-03-06 14:40:02 +01:00
Ricardo Wurmus
4fc9b5b1dd
gnu: Add genrich.
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* gnu/packages/bioinformatics.scm (genrich): New variable.
2019-03-06 13:28:45 +01:00
Ricardo Wurmus
1fe9a36173
gnu: r-dnacopy: Remove duplicate definition.
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Reported by Christopher Baines <mail@cbaines.net>.
* gnu/packages/bioinformatics.scm (r-dnacopy): Remove variable.
2019-03-06 10:39:28 +01:00
Ricardo Wurmus
3dad6087be
gnu: Add r-org-dr-eg-db.
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* gnu/packages/bioconductor.scm (r-org-dr-eg-db): New variable.
2019-03-06 10:29:25 +01:00
Ricardo Wurmus
43d6776ba4
gnu: java-eclipse-jdt-core: Update to 3.16.0.
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* gnu/packages/java.scm (java-eclipse-jdt-core): Update to 3.16.0.
2019-03-06 10:10:23 +01:00
Ricardo Wurmus
c8427a5e91
gnu: java-eclipse-core-resources: Update to 3.13.200.
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* gnu/packages/java.scm (java-eclipse-core-resources): Update to 3.13.200.
2019-03-06 10:10:23 +01:00
Ricardo Wurmus
4fa9b6e657
gnu: java-eclipse-core-runtime: Update to 3.15.100.
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* gnu/packages/java.scm (java-eclipse-core-runtime): Update to 3.15.100.
2019-03-06 10:10:23 +01:00
Ricardo Wurmus
e40e3792e6
gnu: java-eclipse-equinox-common: Update to 3.10.200.
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* gnu/packages/java.scm (java-eclipse-equinox-common): Update to 3.10.200.
2019-03-06 10:10:19 +01:00