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Author SHA1 Message Date
Marius Bakke b1989c1250
gnu: freetype: Fix CVE-2018-6942. 
* gnu/packages/patches/freetype-CVE-2018-6942.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/fontutils.scm (freetype)[replacement]: New field.
(freetype/fixed): New variable.
 2018-02-20 16:26:20 +01:00
Marius Bakke fb9d035015
gnu: python-pyopenssl: Update to 17.5.0. 
* gnu/packages/python-crypto.scm (python-pyopenssl): Update to 17.5.0.
 2018-02-20 16:03:07 +01:00
Marius Bakke 0ba631b90f
gnu: python-cryptography: Update to 2.1.4. 
* gnu/packages/python-crypto.scm (python-cryptography-vectors,
python-cryptography): Update to 2.1.4.
 2018-02-20 16:03:00 +01:00
Marius Bakke 5c73e162e2
gnu: imagemagick: Update to 6.9.9-35. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-35.
 2018-02-20 15:04:28 +01:00
Marius Bakke 1eaba63f73
gnu: calendar.scm: Use license: prefix. 
* gnu/packages/calendar.scm (libical, khal, remind, libhdate): Use license: prefix.
 2018-02-20 14:58:52 +01:00
Marius Bakke 9d13e77adb
gnu: rrdtool: Use a fixed version of tzdata for tests. 
* gnu/packages/rrdtool.scm (rrdtool)[native-inputs]: Replace TZDATA with
TZDATA-FOR-TESTS.
 2018-02-20 14:58:52 +01:00
Tobias Geerinckx-Rice 775989c7a8
gnu: nix, patchelf: Use HTTPS for nixos.org home pages. 
* gnu/packages/elf.scm (patchelf)[home-page]: Use HTTPS.
* gnu/packages/package-management.scm (nix)[home-page]: Likewise.
 2018-02-20 05:02:44 +01:00
Tobias Geerinckx-Rice ba3913a5d3
gnu: font-hack: Update to 3.002. 
* gnu/packages/fonts.scm (font-hack): Update to 3.002.
 2018-02-20 03:31:09 +01:00
Tobias Geerinckx-Rice 1f577b469a
gnu: chromaprint: Update to 1.4.3. 
* gnu/packages/mp3.scm (chromaprint): Update to 1.4.3.
[source]: Update URI.
 2018-02-19 23:14:02 +01:00
Tobias Geerinckx-Rice 6080632df8
gnu: socat: Update to 1.7.3.2. 
* gnu/packages/networking.scm (socat): Update to 1.7.3.2.
 2018-02-19 23:14:02 +01:00
Tobias Geerinckx-Rice 5404f1c29d
gnu: setbfree: Update to 0.8.5. 
* gnu/packages/music.scm (setbfree): Update to 0.8.5.
 2018-02-19 23:14:01 +01:00
Tobias Geerinckx-Rice 48fbb24c90
gnu: ola: Update to 0.10.6. 
* gnu/packages/lighting.scm (ola): Update to 0.10.6.
 2018-02-19 23:14:01 +01:00
Tobias Geerinckx-Rice 8af77fe96b
gnu: pciutils: Use HTTPS home page. 
* gnu/packages/pciutils.scm (pciutils)[home-page]: Use HTTPS.
 2018-02-19 23:14:01 +01:00
ng0 54a402ddd1
gnu: neomutt: Update to 20171215. 
* gnu/packages/mail.scm (neomutt): Update to 20171215.
[inputs]: Move "docbook-xsl" to [native-inputs].
[native-inputs]: Remove "autoconf". Add "tcl", "docbook-xml", "w3m".
[argumnets]: Switch to autosetup based build. Add new phases "fix-sasl-test",
"fix-docbook". Remove phase "autoconf".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-19 22:31:09 +01:00
mephi42 b91004c2f5
gnu: Add basic support for s390x-linux-gnu targets. 
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add
  "s390x-linux".
* gnu/packages/linux.scm (system->linux-architecture): Add "s390"
  prefix.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-19 22:22:21 +01:00
Ludovic Courtès 900be977ae
tests: Remove outdated comment. 
* gnu/tests/base.scm (run-basic-test): Remove outdated comment.
 2018-02-19 22:04:11 +01:00
Ludovic Courtès 27a2c9c3e0
marionette: Use QEMU's "VM channel" mechanism. 
* gnu/tests.scm (<marionette-configuration>)[device]: Default to
"/dev/virtio-ports/org.gnu.guix.port.0".
* gnu/tests.scm (marionette-shepherd-service): Remove (guix build
syscalls) from 'modules'.  Remove 'tcsetattr' call from 'start'.
* gnu/build/marionette.scm (make-marionette): Use "-virtserialport"
instead of "-virtconsole".
 2018-02-19 22:04:11 +01:00
Ludovic Courtès ce0a62f6c5
services: console-font: Don't emit the IUTF8 console code. 
Fixes <https://bugs.gnu.org/30505>.

* gnu/services/base.scm (unicode-start): Remove 'display' call to FD for
"\x1b%G" console code.
 2018-02-19 22:04:10 +01:00
Hartmut Goebel 7e4e3df4e8
gnu: qqc2-desktop-style: Fix missing input 'qtquickcontrols2'. 
* gnu/packages/kde-frameworks.scm (qqc2-desktop-style)<inputs>:
  Add qtquickcontrols2.
 2018-02-19 20:30:53 +01:00
Ricardo Wurmus 21169e3148
gnu: mcomix: Disable tests. 
* gnu/packages/image-viewers.scm (mcomix)[arguments]: Disable tests.

Fixes <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=30523>.
 2018-02-19 18:33:19 +01:00
Ricardo Wurmus ab36fb17e6
gnu: nss-pam-ldapd: Update to 0.9.9. 
* gnu/packages/openldap.scm (nss-pam-ldapd): Update to 0.9.9.
 2018-02-19 18:16:16 +01:00
Marius Bakke 5f3155ee6c
gnu: ddrescue: Update to 1.23. 
* gnu/packages/disk.scm (ddrescue): Update to 1.23.
 2018-02-19 17:47:11 +01:00
Marius Bakke 4dc159bb62
gnu: ffmpeg@2.8: Update to 2.8.14. 
* gnu/packages/video.scm (ffmpeg-2.8): Update to 2.8.14.
 2018-02-19 15:03:44 +01:00
Rutger Helling 4ecfc16839
gnu: xpra: Disable abstract X11 sockets. 
* gnu/packages/xorg.scm (xpra): Disable abstract X11 sockets.
 2018-02-19 12:56:47 +01:00
Efraim Flashner d81a739a1f
gnu: clisp: Fix building on aarch64-linux. 
* gnu/packages/lisp.scm (clisp)[arguments]: Remove 'bindings/glibc' module.
 2018-02-19 11:30:48 +02:00
Ricardo Wurmus 79c6af13d0
gnu: r-delayedmatrixstats: Update to 1.0.3. 
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.0.3.
 2018-02-19 09:53:05 +01:00
Ricardo Wurmus 59b2864d6c
gnu: r-scater: Update to 1.6.3. 
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.6.3.
 2018-02-19 09:53:05 +01:00
Ricardo Wurmus d578278e35
gnu: r-gviz: Update to 1.22.3. 
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.22.3.
 2018-02-19 09:53:05 +01:00
Ricardo Wurmus ca7855fcd2
gnu: r-gprofiler: Update to 0.6.4. 
* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.4.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 8877ab432e
gnu: r-ensembldb: Update to 2.2.2. 
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.2.2.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus ebec98ae1d
gnu: r-seurat: Update to 2.2.1. 
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.2.1.
[propagated-inputs]: Remove r-nmf; add r-metap.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 3118b28644
gnu: r-qtl: Update to 1.42-7. 
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.42-7.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 824c200475
gnu: r-genomicranges: Update to 1.30.2. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.30.2.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus e8484711c6
gnu: r-getopt: Update to 1.20.2. 
* gnu/packages/bioinformatics.scm (r-getopt): Update to 1.20.2.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 1e898bbaea
gnu: r-pryr: Update to 0.1.4. 
* gnu/packages/statistics.scm (r-pryr): Update to 0.1.4.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 50ee54eabd
gnu: r-bh: Update to 1.66.0-1. 
* gnu/packages/statistics.scm (r-bh): Update to 1.66.0-1.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus ffa7fe3062
gnu: r-nlme: Update to 3.1-131.1. 
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-131.1.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 9800f7d9e8
gnu: r-bookdown: Update to 0.7. 
* gnu/packages/bioinformatics.scm (r-bookdown): Update to 0.7.
[propagated-inputs]: Add r-tinytex.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 4376166b03
gnu: Add r-metap. 
* gnu/packages/cran.scm (r-metap): New variable.
 2018-02-19 09:53:04 +01:00
Ricardo Wurmus 846f4c2303
gnu: Add r-tinytex. 
* gnu/packages/cran.scm (r-tinytex): New variable.
 2018-02-19 09:53:04 +01:00
Rutger Helling a754c79013
gnu: youtube-dl: Update to 2018.02.11. 
* gnu/packages/video.scm (youtube-dl): Update to 2018.02.11.
 2018-02-19 09:22:47 +01:00
Rutger Helling 90e37ea088
gnu: retroarch: Update to 1.7.1. 
* gnu/packages/games.scm (retroarch): Update to 1.7.1.
 2018-02-19 08:12:59 +01:00
Tobias Geerinckx-Rice 77659ff3ad
gnu: iverilog: Use Texinfo in description. 
* gnu/packages/fpga.scm (iverilog)[description]: Substitute @command for
inverted commas.
 2018-02-19 06:00:33 +01:00
Tobias Geerinckx-Rice c046904d74
gnu: iverilog: Update to 10.2. 
* gnu/packages/fpga.scm (iverilog): Update to 10.2.
 2018-02-19 06:00:32 +01:00
Tobias Geerinckx-Rice 05ee510272
gnu: nyacc: Update to 0.83.3. 
* gnu/packages/mes.scm (nyacc): Update to 0.83.3.
 2018-02-19 06:00:32 +01:00
Tobias Geerinckx-Rice e51b3145ca
gnu: nasm: Update to 2.13.03. 
* gnu/packages/assembly.scm (nasm): Update to 2.13.03.
 2018-02-19 06:00:31 +01:00
Tobias Geerinckx-Rice 0bd8d6dc28
gnu: ccache: Update to 3.4.1. 
* gnu/packages/ccache.scm (ccache): Update to 3.4.1.
 2018-02-19 06:00:31 +01:00
Tobias Geerinckx-Rice 16cb3b8fe0
gnu: lsof: Run tests. 
* gnu/packages/lsof.scm (lsof)[arguments]: Remove untrue #:TESTS?.
Add ‘disable-failing-tests’ and ‘check’ phases to run them.
 2018-02-19 06:00:30 +01:00
Tobias Geerinckx-Rice c2799070ca
gnu: lsof: Remove build timestamp. 
* gnu/packages/lsof.scm (lsof)[arguments]: Add ‘patch-timestamps’ phase.
 2018-02-19 06:00:30 +01:00
Tobias Geerinckx-Rice b7fd3e96c7
gnu: lsof: Update phase style. 
* gnu/packages/lsof.scm (lsof)[arguments]: Substitute INVOKE for SYSTEM*
and end phases with #t.
 2018-02-19 06:00:29 +01:00
Tobias Geerinckx-Rice 57774ae150
gnu: lsof: Make perl a native input. 
* gnu/packages/lsof.scm (lsof)[inputs]: Move perl from here...
[native-inputs]: ...to here.
 2018-02-19 06:00:29 +01:00
Tobias Geerinckx-Rice cb443e55dc
gnu: lsof: Factorise source URIs. 
* gnu/packages/lsof.scm (%ftp-base): Remove variable.
(lsof)[source]: Construct mirror URI list programatically.
 2018-02-19 06:00:28 +01:00
Tobias Geerinckx-Rice 5ae76e8f16
gnu: lsof: Replace dead mirror. 
* gnu/packages/lsof.scm (lsof)[source]: Replace sunsite.ualberta.ca with
mirrorservice.org, which offers both HTTP and FTP services.
 2018-02-19 06:00:27 +01:00
Tobias Geerinckx-Rice 7268563be5
gnu: dvdstyler: Update to 3.0.4. 
* gnu/packages/cdrom.scm (dvdstyler): Update to 3.0.4.
 2018-02-19 06:00:27 +01:00
Tobias Geerinckx-Rice 14eb54349a
gnu: perl-xml-sax: Update to 1.00. 
* gnu/packages/xml.scm (perl-xml-sax): Update to 1.00.
 2018-02-19 06:00:26 +01:00
Tobias Geerinckx-Rice 6208fcf742
gnu: perl-importer: Update to 0.025. 
* gnu/packages/perl.scm (perl-importer): Update to 0.025.
 2018-02-19 06:00:25 +01:00
Tobias Geerinckx-Rice 780fa70cd3
gnu: perl-params-validationcompiler: Update to 0.27. 
* gnu/packages/perl.scm (perl-params-validationcompiler): Update to 0.27.
[native-inputs]: Add perl-type-tiny for another test.
 2018-02-19 06:00:25 +01:00
Tobias Geerinckx-Rice 9c22b13136
gnu: xinetd: Don't hard-code tarball version. 
* gnu/packages/web.scm (xinetd)[source]: Construct URI using VERSION.
 2018-02-19 06:00:24 +01:00
Tobias Geerinckx-Rice 96d47129f6
gnu: ncftp: Update to 3.2.6. 
* gnu/packages/ftp.scm (ncftp): Update to 3.2.6.
[source]: Use .xz instead of (discontinued) .bz2 tarball.
 2018-02-19 06:00:23 +01:00
Tobias Geerinckx-Rice 9e7f1d103d
gnu: knot: Update to 2.6.5. 
* gnu/packages/dns.scm (knot): Update to 2.6.5.
 2018-02-19 05:57:19 +01:00
Tobias Geerinckx-Rice 331ebb7f94
gnu: awscli: Update to 1.14.41. 
* gnu/packages/python-web.scm (awscli): Update to 1.14.41.
 2018-02-19 05:57:19 +01:00
Tobias Geerinckx-Rice 659fef8ddb
gnu: libfilezilla: Update to 0.12.0. 
* gnu/packages/ftp.scm (libfilezilla): Update to 0.12.0.
 2018-02-19 05:57:18 +01:00
Tobias Geerinckx-Rice eae7ece1af
gnu: erlang: Use HTTPS home page. 
* gnu/packages/erlang.scm (erlang)[home-page]: Use HTTPS with the new
canonical domain.
 2018-02-19 05:57:17 +01:00
okapi 2922852e86
gnu: Add gzdoom. 
* gnu/packages/games.scm (gzdoom): New variable.
* gnu/packages/patches/gzdoom-search-in-installed-share.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-19 00:33:34 +01:00
okapi 9073c8758c
gnu: Add fluid-3. 
* gnu/packages/audio.scm (fluid-3): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-19 00:33:34 +01:00
Ludovic Courtès 5912791655
gnu: guix: Update snapshot to bdf0c64. 
* gnu/packages/package-management.scm (guix): Update to bdf0c64.
[arguments] <copy-bootstrap-guile>: Move after 'check' phase.  Rewrite
to use "guix download" and to intern only one or two tarballs.
[inputs]: Remove "boot-guile/*".  Add "boot-guile" and, optionally,
"boot-guile/i686".
 2018-02-19 00:33:34 +01:00
Ludovic Courtès 37084ba561
services: avahi: Publish '_workstation._tcp' by default. 
This reverts to the behavior of avahi-daemon prior to Avahi 0.7 (commit
550f4509ac).

* gnu/services/avahi.scm (<avahi-configuration>)[publish-workstation?]:
New field.
(configuration-file): Honor it.
 2018-02-19 00:33:34 +01:00
Ludovic Courtès ad7a807d84
services: avahi: Read PID file from /run. 
* gnu/services/avahi.scm (%avahi-activation, avahi-shepherd-service):
Use /run/avahi-daemon/ instead of /var/run/avahi-daemon/.  This was the
case since the switch to Avahi 0.7 (commit
550f4509ac).
 2018-02-19 00:33:34 +01:00
Marius Bakke 418cbf6e22
gnu: qt.scm: Remove unneeded import. 
* gnu/packages/qt.scm (define-module): Don't import (gnu packages base).
 2018-02-18 20:44:19 +01:00
Marius Bakke 5ce3f93bc5
gnu: Add xorgproto. 
* gnu/packages/xorg.scm (xorgproto): New public variable.
 2018-02-18 20:23:45 +01:00
Marius Bakke 1ac1872161
gnu: lvm2: Remove obsolete phase. 
* gnu/packages/linux.scm (lvm2)[arguments]: Remove MAKE-OBJECTS-WRITABLE-PHASE.
 2018-02-18 20:13:42 +01:00
Marius Bakke c06bf6a3e2
gnu: argon2: Update to 20171227. 
* gnu/packages/password-utils.scm (argon2): Update to 20171227.
[arguments]: Add OPTTEST=1 to #:make-flags to prevent "-march=native".  Remove
custom install phase.  Add 'patch-Makefile' phase.
[license]: Add ASL2.0.
 2018-02-18 20:13:42 +01:00
Hartmut Goebel 102fc5bc29
gnu: Add qqc2-desktop-style. 
* gnu/packages/kde-frameworks.scm (qqc2-desktop-style): New
  variable.
 2018-02-18 19:21:41 +01:00
Hartmut Goebel ac5f3988c4
gnu: knotifications: Add optional input "qtspeech". 
* gnu/pacakges/kde-frameworks.scm (knotifications)[inputs]: Add
  qtspeech.
 2018-02-18 19:21:40 +01:00
Hartmut Goebel 96e622f15d
gnu: ktextwidgets: Add optional input "qtspeech". 
* gnu/pacakges/kde-frameworks.scm (ktextwidgets)[inputs]: Add
  qtspeech.
 2018-02-18 19:21:40 +01:00
Hartmut Goebel bb8d1b2a72
gnu: qca: Use mirror://kde scheme for source-url. 
* gnu/packages/kde.scm (qca)[source]: Use mirror://kde scheme.
 2018-02-18 19:21:39 +01:00
Hartmut Goebel 343bffbd79
gnu: snorenotify: Use mirror://kde scheme for source-url. 
* gnu/packages/kde.scm (snorenotify)[source]: Use mirror://kde scheme.
 2018-02-18 19:21:38 +01:00
Hartmut Goebel 352e14d87c
gnu: libkomparediff2: Use mirror://kde scheme for source-url. 
* gnu/packages/kde.scm (libkomparediff2)[source]: Use mirror://kde
  scheme.
 2018-02-18 19:21:38 +01:00
Hartmut Goebel 3600001693
gnu: libkomparediff2: Update to 17.12.1 
* gnu/packages/kde.scm(libkomparediff2): Update to 17.12.1.
  [source] Switch to KDE mirror, use mirror://kde scheme.
 2018-02-18 19:21:37 +01:00
Hartmut Goebel c8c06bf5b0
gnu: libksysguard: Update to 5.11.5. 
* gnu/packages/kde.scm (libksysguard: Update to 5.11.5).
 2018-02-18 19:21:36 +01:00
Hartmut Goebel bd533cbb7f
gnu: kpmcore: Update to 3.3.0 
* gnu/packages/kde-frameworks.scm (kpmcore): Update to 3.3.0.
 2018-02-18 19:21:36 +01:00
Hartmut Goebel 431ff8bea3
gnu: kde-frameworks: Update to 5.42.0 resp. 5.42.1 
Beside simple updating:
- Change all todo-comments for test-cases into "fixme" comments to make them
  easier to find.
- breeze-icons: Blacklist a test failing at build.kde.org, too.
- extra-cmake-modules: Patch out a vanised test-case.
- kfilemetadata: Can now run the test-suite uninstalled. Blacklist a failing
  test-case.
- kimageformats: No longer symlink plugins into ./bin for testing.
- ktexteditor: Remove now unused patch.
- plasma-framework: Add input kirigami
- sonnet: For testing set QT_QPA_PLATFORM=offscreen.

* gnu/packages/kde-frameworks.scm (attica, baloo, bluez-qt, kactivities,
  kactivities-stats, kapidox, karchive, kauth, kbookmarks, kcmutils, kcodecs,
  kcompletion, kconfig, kconfigwidgets, kcoreaddons, kcrash, kdbusaddons,
  kde-frameworkintegration, kdeclarative, kded, kdelibs4support,
  kdesignerplugin, kdesu, kdewebkit, kdnssd, kdoctools, kemoticons,
  kglobalaccel, kguiaddons, khtml, ki18n, kiconthemes, kidletime, kinit, kio,
  kirigami, kitemmodels, kitemviews, kjobwidgets, kjs, kjsembed, kmediaplayer,
  knewstuff, knotifications, knotifyconfig, kpackage, kparts, kpeople,
  kplotting, kpty, kross, krunner, kservice, ksyntaxhighlighting,
  ktextwidgets, kunitconversion, kwallet, kwayland, kwindowsystem, kxmlgui,
  kxmlrpcclient, modemmanager-qt, networkmanager-qt, oxygen-icons,
  prison, solid, threadweaver): Update to 5.42.0.
  (kwidgetsaddons): Update to 5.42.1.
  (breeze-icons): Update to 5.42.0. [#:phases]<disable-failing-test> New
  phase.
  (extra-cmake-modules): Update to 5.42.0.
  [#:phases]<post-5.42.0-release-fix>: New phase.
  (kfilemetadata): Update to 5.42.0. [#:phases]: No longer move check behind
  install. [#:phases]<check-setup> Remove. [#:phase]<disable-failing-test> New
  phase.
  (kimageformats): Update to 5.42.0. [#:phases]<check-setup>: No longer
  symlink plugins into ./bin.
  (ktesteditor)[source]: Remove patch.
  (plasma-framework)[inputs]: Add  kirigami
  (sonnet): Update to 5.42.0. [#:phases]<check-setup> New phase.
* gnu/packages/patches/ktexteditor-5.39.0-autotests-dependencies.patch:
  Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2018-02-18 19:21:35 +01:00
Hartmut Goebel 042f7c2636
gnu: qtserialport: Use the store paths for dynamically loaded libs. 
Transfer the applicable NixOS patches for qtserialport as of 2018-01-19:

- src/serialport/qtudev_p.h: Transferred: Use hard-coded path to libudev.

* gnu/packages/qt.scm(qtserialport)[#:phases]<patch-dlopen-paths>:
  New phase.
 2018-02-18 18:39:19 +01:00
Hartmut Goebel 64f390a409
gnu: qtbase: Use the store paths for other packages and dynamically loaded libs. 
Transfer the applicable NixOS patches as of 2018-01-19:

- Not adopted: We don't change the .cmake.in and .prf, but use config
  mechanisms provided by th Qt build system.

- src/corelib/tools/qtimezoneprivate_tz.cpp: Adopted patch: Use $TZDIR to
  search for time-zone data. Thus avoid depending on package "tzdata", which
  often introduces changes with near-immediate effects, so it's important to
  be able to update it fast.

- src/corelib/kernel/qcoreapplication.cpp: Not adopted: NixOS adds plugin
  paths derived from PATH. We do not need this, since we already have
  native-search-path QT_PLUGIN_PATH.

- src/network/kernel/qdnslookup_unix.cpp,
  src/network/kernel/qhostinfo_unix.cpp: Transferred: Use hard-coded path to
  libresolv.

- src/network/ssl/qsslcontext_openssl.cpp: Not adopted: NixOS changes a
  conditional compilation for Qt 5.9 (but leaves it unchanged for Qt 5.10) to
  fix compilation with libressl.  But Qt does not support libressl anway, see
  config.tests/openssl/openssl.cpp in qtbase 5.9.4.

- src/plugins/platforminputcontexts/compose/generator/qtablegenerator.cpp:
  Transferred: Use hard-coded path to libx11.

- src/plugins/platforms/xcb/gl_integrations/xcb_glx/qglxintegration.cpp:
  Transferred: Use hard-coded path to mess's libGL, no need for a fall-back.

- src/plugins/platforms/xcb/qxcbcursor.cpp: Transferred: Use hard-coded path
  to Xcursor.

- src/plugins/platformthemes/gtk3/main.cpp: Not adopted: NixOS changes
  $XDG_DATA_DIRS and $GIO_EXTRA_MODULES in the code. We already have a
  search-path-specification for this.

- src/testlib/qtestassert.h: Decided not to adopt this for guix.

* gnu/packages/patches/qtbase-use-TZDIR.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qt.scm (qtbase): Add comment. [source]: Use new patch.
  [arguments]<#:phases>'patch-paths': New phase.
 2018-02-18 18:39:18 +01:00
Alex Vong bdf0c644da
gnu: python2-django-mailman3: Update to 1.1.0. 
* gnu/packages/python.scm (python2-django-mailman3): Update to 1.1.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2018-02-18 17:37:51 +01:00
Alex Vong c115a1c8d7
gnu: python-mailmanclient: Update to 3.1.1. 
* gnu/packages/python.scm (python-mailmanclient, python2-mailmanclient):
Update to 3.1.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2018-02-18 17:36:52 +01:00
Alex Vong 98b90194d3
gnu: haskell: Use HTTPS where possible. 
* gnu/packages/haskell.scm (cl-yale-haskell)[source, home-page]: Use HTTPS.
(ghc-libxml)[source, home-page]: Likewise.
(ghc-haddock-library)[home-page]: Likewise.
(ghc-haddock-api)[home-page]: Likewise.
(ghc-haddock)[home-page]: Likewise.
(ghc-simple-reflect)[home-page]: Likewise.
(ghc-alex)[home-page]: Likewise.
(ghc-concatenative)[description]: Likewise.
(ghc-openglraw)[home-page]: Likewise.
(ghc-glut)[home-page]: Likewise.
(ghc-gluraw)[home-page]: Likewise.
(ghc-opengl)[home-page]: Likewise.
(cabal-install)[home-page]: Likewise.
(ghc-mtl)[description]: Likewise.
(ghc-temporary)[home-page]: Likewise.
(ghc-temporary-rc)[home-page]: Likewise.
(ghc-fgl)[home-page]: Likewise.
(ghc-blaze-markup)[home-page]: Likewise.
(ghc-doctest)[description]: Likewise.
(ghc-scientific)[description]: Likewise.
(ghc-regex-pcre-builtin)[description]: Likewise.
(ghc-diff)[home-page]: Likewise.
(ghc-highlighting-kate)[description]: Likewise.
(ghc-hslua)[description]: Likewise.
(ghc-pandoc)[home-page]: Likewise.
(ghc-rfc5051)[home-page]: Likewise.
(ghc-data-ordlist)[home-page]: Likewise.
(ghc-regex-compat-tdfa)[home-page]: Likewise.
(ghc-sandi)[home-page]: Likewise.
(ghc-bytestring-handle)[home-page]: Likewise.
(ghc-tar)[home-page]: Likewise.
(ghc-transformers)[home-page]: Likewise.
(ghc-patience)[home-page]: Likewise.
(ghc-monads-tf)[home-page]: Likewise.
(ghc-colour)[home-page]: Likewise.
(ghc-directory)[home-page]: Likewise.
(ghc-process)[home-page]: Likewise.
(ghc-wl-pprint-text)[home-page]: Likewise.
(ghc-fgl-arbitrary)[home-page]: Likewise.
(ghc-graphviz)[description]: Likewise.
(ghc-array)[home-page]: Likewise.
(ghc-storable-complex)[source]: Likewise.
(ghc-hmatrix)[source]: Likewise.
(ghc-hmatrix-gsl)[source]: Likewise.
(ghc-hmatrix-special)[source]: Likewise.
(ghc-hmatrix-gsl-stats)[source]: Likewise.
(ghc-easyplot)[source, home-page]: Likewise.
(ghc-hashtables)[source]: Likewise.
(ghc-data-accessor)[home-page]: Likewise.
(ghc-data-accessor-transformers)[home-page]: Likewise.
(ghc-gnuplot)[home-page]: Likewise.
(ghc-terminal-size)[home-page]: Likewise.
(ghc-language-c)[home-page]: Likewise.
(ghc-hslogger)[home-page]: Likewise.
(ghc-json)[home-page]: Likewise.
(ghc-hex)[home-page]: Likewise.
(ghc-psqueues)[description]: Likewise.
(ghc-uuid-types)[description]: Likewise.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2018-02-18 17:35:20 +01:00
Arun Isaac d72f59a4cf
gnu: swaks: Use HTTPS home page and source URIs. 
* gnu/packages/mail.scm (swaks)[source]: Use HTTPS URI.
[home-page]: Use HTTPS URI.
[arguments]: Replace system* with invoke.
 2018-02-18 18:16:49 +05:30
Arun Isaac f25e1e2448
gnu: Add python2-mapnik. 
* gnu/packages/geo.scm (python2-mapnik): New variable.
 2018-02-18 17:30:20 +05:30
Arun Isaac f2b005f630
gnu: Add mapnik. 
* gnu/packages/geo.scm (mapnik): New variable.
 2018-02-18 17:30:12 +05:30
Ricardo Wurmus c46e654f39
gnu: Add emacs-polymode. 
* gnu/packages/emacs.scm (emacs-polymode): New variable.
 2018-02-18 12:31:03 +01:00
Ricardo Wurmus 46fc9a7e0d
gnu: Pass "--target=i386-pc" when installing GRUB for legacy BIOS. 
* gnu/bootloader/grub.scm (install-grub): Add "--target=i386-pc" to the list
of arguments to "grub-install".

Fixes <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=30311>.
 2018-02-18 12:28:56 +01:00
Ricardo Wurmus f6d259b4d9
gnu: emacs-slack: Update to 0-2.02ee1d73. 
* gnu/packages/emacs.scm (emacs-slack): Update to 0-2.02ee1d73.
 2018-02-18 12:28:56 +01:00
Efraim Flashner c9b7ed7de9
gnu: c-ares: Update to 1.14.0. 
* gnu/packages/adns.scm (c-ares): Update to 1.14.0.
[license]: Use https.
 2018-02-18 13:05:07 +02:00
Mark H Weaver 629daea981
gnu: linux-libre: Update to 4.15.4. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.15.4.
(%linux-libre-hash): Update hash.
 2018-02-17 23:57:21 -05:00
Mark H Weaver 4a9ea9750d
gnu: linux-libre@4.14: Update to 4.14.20. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.20.
(%linux-libre-4.14-hash): Update hash.
 2018-02-17 23:55:40 -05:00
Mark H Weaver 7b4a850c23
gnu: linux-libre@4.9: Update to 4.9.82. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.82.
 2018-02-17 23:55:02 -05:00
Mark H Weaver 1afd125beb
gnu: linux-libre@4.4: Update to 4.4.116. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.116.
 2018-02-17 23:54:27 -05:00
Danny Milosavljevic fdd400d82e
gnu: make-linux-libre: Use invoke. 
* gnu/packages/linux.scm (make-linux-libre): Use invoke.
 2018-02-17 23:48:33 -05:00
Chris Marusich 67f0c4228b
gnu: Update gnu-standards to 2018-02-18. 
* gnu/packages/gnu-doc.scm (gnu-standards) <version>: Update to 2018-02-18.
  (gnu-standards) <origin>: While we're here, use "gnu-standards-src" as the
  file-name, rather than the default, which is "cvs-checkout".
 2018-02-18 03:19:26 +01:00
Ludovic Courtès 3f3c0ab434
gnu: mailutils: Fix uninitialized memory bug. 
This was causing segfaults in the MH test suite when building with
glibc 2.26 on x86_64.

* gnu/packages/patches/mailutils-uninitialized-memory.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mail.scm (mailutils)[source](patches, snippet): New
fields.
[native-inputs]: New field.
 2018-02-18 00:48:17 +01:00
Ludovic Courtès d65930708f
gnu: gcc@4.9: Fix libsanitizer compilation with glibc 2.26. 
* gnu/packages/patches/gcc-4.9-libsanitizer-fix.patch: New file.
* gnu/packages/gcc.scm (gcc-4.9)[source](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2018-02-18 00:48:16 +01:00
Ludovic Courtès a9d4a9ad33
gnu: gvpe: Fix compilation against glibc 2.26. 
* gnu/packages/vpn.scm (gvpe)[source](modules, snippet): New fields.
 2018-02-18 00:48:16 +01:00
Ludovic Courtès bfb06e580e
gnu: shepherd: Add dependency on guile-readline. 
* gnu/packages/admin.scm (shepherd)[inputs]: Add GUILE-READLINE.
 2018-02-18 00:48:16 +01:00
Ricardo Wurmus ff9d1a2f0c
Merge branch 'master' into core-updates 2018-02-18 00:39:25 +01:00
Ricardo Wurmus a01d926f9d
gnu: geda-gaf: Disable two broken tests. 
* gnu/packages/engineering.scm (geda-gaf)[arguments]: Disable two failing
tests.
 2018-02-18 00:30:47 +01:00
Ricardo Wurmus 5f78ce490e
gnu: Add emacs-nov-el. 
* gnu/packages/emacs.scm (emacs-nov-el): New variable.
 2018-02-18 00:30:47 +01:00
Ricardo Wurmus 8d89921474
gnu: Add emacs-esxml. 
* gnu/packages/emacs.scm (emacs-esxml): New variable.
 2018-02-18 00:30:47 +01:00
Marius Bakke 6f6db0269f
gnu: python-hacking: Update to 1.0.0. 
* gnu/packages/openstack.scm (python-hacking): Update to 1.0.0.
[propagated-inputs]: Change PYTHON-FLAKE8 to PYTHON-FLAKE8-2.5.
* gnu/packages/python.scm (python-flake8-2.5, python2-flake8-2.5): New public
variables.
 2018-02-17 21:45:31 +01:00
Marius Bakke ca6197dd65
gnu: python-defusedxml: Update to 0.5.0. 
* gnu/packages/xml.scm (python-defusedxml): Update to 0.5.0.
 2018-02-17 20:59:11 +01:00
Marius Bakke 26176bee23
gnu: python-waitress: Update to 1.1.0. 
* gnu/packages/patches/python-waitress-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-waitress): Update to 1.1.0.
[source](patches): New field.
 2018-02-17 20:49:39 +01:00
Efraim Flashner a39aa68394
gnu: libffcall: Update to 2.1. 
* gnu/packages/libffcall.scm (libffcall): Update to 2.1.
 2018-02-17 21:20:31 +02:00
Marius Bakke 3ce4e265dd
gnu: btrfs-progs: Fix bash completions. 
This is a follow-up to commit 9a1c4a981b.  Bash
completions must have the same name as the executable.

* gnu/packages/linux.scm (btrfs-progs)[arguments]: Rename "btrfs-completion"
script to "btrfs".
 2018-02-17 16:15:43 +01:00
Marius Bakke 3971dcbf0e
gnu: zathura: Don't propagate girara in dependent packages. 
* gnu/packages/pdf.scm (zathura-cb, zathura-ps, zathura-djvu,
zathura-pdf-mupdf, zathura-pdf-poppler)[propagated-inputs]: Remove GIRARA.
 2018-02-17 16:15:43 +01:00
Marius Bakke 2416665ecb
gnu: zathura, girara: Use the test-only xorg variant for tests. 
* gnu/packages/gtk.scm (girara)[native-inputs]: Replace XORG-SERVER with
XORG-SERVER-1.19.3.
[arguments]: Add #:disallowed-references.
* gnu/packages/pdf.scm (zathura)[native-inputs, arguments]: Likewise.
 2018-02-17 16:15:43 +01:00
Marius Bakke f0eba502a1
gnu: zathura: Increase test timeouts. 
* gnu/packages/pdf.scm (zathura): Export CK_DEFAULT_TIMEOUT before running
tests.
 2018-02-17 16:15:43 +01:00
Marius Bakke 3e6b398a48
gnu: girara: Increase test timeouts. 
Fixes build failures on Hydra.  Reported by Mark H Weaver in
<https://lists.gnu.org/archive/html/guix-devel/2017-12/msg00391.html>.

* gnu/packages/gtk.scm (girara)[arguments]: Set CK_DEFAULT_TIMEOUT before
running tests.
 2018-02-17 16:15:43 +01:00
Ben Woodcroft bb3359ab8e
gnu: ruby-2.4.3: Update rubygems to 2.7.6. 
This fixes the security issues described at
https://www.ruby-lang.org/en/news/2018/02/17/multiple-vulnerabilities-in-
rubygems/

* gnu/packages/patches/ruby-rubygems-276-for-ruby24.patch: New file.
* gnu/packages/ruby.scm (ruby-2.4.3)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2018-02-18 00:48:50 +10:00
Ricardo Wurmus 1ecbd859a1
gnu: ghc-mtl: Remove ghc-transformers from inputs. 
* gnu/packages/haskell.scm (ghc-mtl)[arguments]: Explain why we need to allow
a newer version of the transformers package.
[inputs]: Remove ghc-transformers.
 2018-02-17 14:02:57 +01:00
Ricardo Wurmus 9729f9756c
gnu: ghc-mtl: Remove ghc-transformers from inputs. 
* gnu/packages/haskell.scm (ghc-mtl)[arguments]: Explain why we need to allow
a newer version of the transformers package.
[inputs]: Remove ghc-transformers.
 2018-02-17 14:01:15 +01:00
Ben Woodcroft 369eee8763
gnu: vsearch: Update to 2.7.1. 
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.7.1.
 2018-02-17 12:44:29 +10:00
Danny Milosavljevic 4e1efba42b
services: xorg: Import (ice-9 rdelim). 
* gnu/services/xorg.scm (xinitrc): Import (ice-9 rdelim).
 2018-02-17 02:48:00 +01:00
Marius Bakke c8f1a49f0e
gnu: git: Update to 2.16.2. 
* gnu/packages/version-control.scm (git): Update to 2.16.2.
 2018-02-16 22:13:38 +01:00
Marius Bakke 445929e038
gnu: glpk: Update to 4.65. 
* gnu/packages/maths.scm (glpk): Update to 4.65.
 2018-02-16 22:08:03 +01:00
Marius Bakke 294ae4d7f8
gnu: xf86-video-vesa: Update to 2.4.0. 
* gnu/packages/xorg.scm (xf86-video-vesa): Update to 2.4.0.
 2018-02-16 22:02:45 +01:00
Nicolas Goaziou fa7d8ea1a2
gnu: Add colobot. 
* gnu/packages/games.scm (colobot): New variable.
 2018-02-16 20:57:14 +01:00
Kei Kebreau 3d8cbdc40e
gnu: bigloo: Fix source hash. 
Fixes <https://bugs.gnu.org/30436>.

* gnu/packages/scheme.scm (bigloo)[source]: Fix hash.
 2018-02-16 14:42:34 -05:00
Mark H Weaver 150062f190
Merge branch 'master' into core-updates 2018-02-16 13:14:26 -05:00
Marius Bakke 54a93355c2
gnu: ruby-sqlite3: Adjust failing test. 
* gnu/packages/ruby.scm (ruby-sqlite3): Adjust test to work with SQLite 3.21.
 2018-02-16 19:09:03 +01:00
Danny Milosavljevic f6cccefed5
gnu: ghc: Make memory allocator decommit memory on Linux < 4.5. 
* gnu/packages/patches/ghc-8.0-fall-back-to-madv_dontneed.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/haskell.scm (ghc-8): Use it.
 2018-02-16 12:41:01 -05:00
David Thompson 6a3cf4e6c7
gnu: tiled: Update to 1.1.2. 
* gnu/packages/game-development.scm (tiled): Update to 1.1.2.
 2018-02-16 10:16:09 -05:00
Rutger Helling c2957cb7ec
gnu: mpv: Update to 0.28.2. 
* gnu/packages/video.scm (mpv): Update to 0.28.2.
 2018-02-16 13:09:22 +01:00
Tobias Geerinckx-Rice 8c078ddec4
gnu: perl-dbd-pg: Update to 3.7.4. 
* gnu/packages/databases.scm (perl-dbd-pg): Update to 3.7.4.
 2018-02-16 11:15:02 +01:00
Tobias Geerinckx-Rice 2d1c7a4e89
gnu: ristretto: Update to 0.8.2. 
* gnu/packages/xfce.scm (ristretto): Update to 0.8.2.
 2018-02-16 11:15:01 +01:00
Tobias Geerinckx-Rice 2b33c4d677
gnu: opusfile: Update to 0.10. 
* gnu/packages/xiph.scm (opusfile): Update to 0.10.
 2018-02-16 11:15:01 +01:00
Tobias Geerinckx-Rice 1b0ce451f4
gnu: erlang: Update phase style. 
* gnu/packages/erlang.scm (erlang)[arguments]: Substitute INVOKE for
SYSTEM*, don't use %OUTPUTS, and end phases with #t.
 2018-02-16 11:11:41 +01:00
Tobias Geerinckx-Rice 629c1947ea
gnu: erlang: Update to 20.2.3. 
* gnu/packages/erlang.scm (erlang): Update to 20.2.3.
 2018-02-16 11:11:41 +01:00
Tobias Geerinckx-Rice ce46dfeba5
gnu: gkrellm: Update to 2.3.10. 
* gnu/packages/gkrellm.scm (gkrellm): Update to 2.3.10.
[arguments]: Remove X11_LIBS override.
 2018-02-16 11:11:41 +01:00
Tobias Geerinckx-Rice 48bbe06edf
gnu: gnustep: Update dockapps home pages. 
* gnu/packages/gnustep.scm (wmbattery, wmclock, wmcpuload)[home-pages]:
Use new dockapps.net domain.
 2018-02-16 11:11:40 +01:00
Tobias Geerinckx-Rice bfe83d568c
gnu: gnustep: Update phase style. 
* gnu/packages/gnustep.scm (windowmaker)[arguments]: Don't use %OUTPUT.
End phases with #t.
(wmbattery, wmclock)[arguments]: Substitute INVOKE for SYSTEM*.  End
phases with #t.
 2018-02-16 11:11:40 +01:00
Tobias Geerinckx-Rice 9a0a4a95f0
gnu: wmcpuload: Update to 1.1.1. 
* gnu/packages/gnustep.scm (wmcpuload): Update to 1.1.1.
 2018-02-16 11:11:40 +01:00
Tobias Geerinckx-Rice 93710d861f
gnu: wmbattery: Update to 2.51. 
* gnu/packages/gnustep.scm (wmbattery): Update to 2.51.
[source]: Remove upstreamed bugfix snippet.
 2018-02-16 11:11:40 +01:00
Tobias Geerinckx-Rice 340978d7b0
gnu: Use HTTPS for supported nongnu.org home pages. 
* gnu/packages/acl.scm (acl)[home-page]: Use HTTPS.
* gnu/packages/admin.scm (dmidecode)[home-page]: Likewise.
* gnu/packages/attr.scm (attr)[home-page]: Likewise.
* gnu/packages/audio.scm (lash)[home-page]: Likewise.
* gnu/packages/avr.scm (avr-libc)[home-page]: Likewise.
* gnu/packages/backup.scm (rdiff-backup, libchop)[home-page]: Likewise.
* gnu/packages/compression.scm (fastjar, lzip, lziprecover, atool)
(lunzip, clzip, lzlib, plzip)[home-page]: Likewise.
* gnu/packages/emacs.scm (geiser, bbdb, m17n-lib, m17n-lib)[home-page]:
Likewise.
* gnu/packages/flashing-tools.scm (avrdude)[home-page]: Likewise.
* gnu/packages/fontutils.scm (libotf)[home-page]: Likewise.
* gnu/packages/game-development.scm (gzochi)[home-page]: Likewise.
* gnu/packages/games.scm (enigma)[home-page]: Likewise.
* gnu/packages/gsasl.scm (libntlm)[home-page]: Likewise.
* gnu/packages/gtk.scm (guile-cairo)[home-page]: Likewise.
* gnu/packages/guile.scm (guile-reader, guile-lib, guile-json)
(guile-redis, g-wrap)[home-page]: Likewise.
* gnu/packages/libunwind.scm (libunwind)[home-page]: Likewise.
* gnu/packages/lout.scm (lout)[home-page]: Likewise.
* gnu/packages/mpd.scm (sonata)[home-page]: Likewise.
* gnu/packages/networking.scm (quagga)[home-page]: Likewise.
* gnu/packages/ratpoison.scm (ratpoison)[home-page]: Likewise.
* gnu/packages/skribilo.scm (skribilo)[home-page]: Likewise.
* gnu/packages/telephony.scm (exosip)[home-page]: Likewise.
* gnu/packages/texinfo.scm (texi2html)[home-page]: Likewise.
* gnu/packages/xdisorg.scm (xbindkeys)[home-page]: Likewise.
 2018-02-16 11:11:40 +01:00
Tobias Geerinckx-Rice 10cac630c2
gnu: plzip: Update to 1.7. 
* gnu/packages/compression.scm (plzip): Update to 1.7.
 2018-02-16 11:11:39 +01:00
Tobias Geerinckx-Rice d1c1d835f6
gnu: lzlib: Update to 1.10. 
* gnu/packages/compression.scm (lzlib): Update to 1.10.
 2018-02-16 11:11:39 +01:00
Tobias Geerinckx-Rice d6d1643b2e
gnu: clzip: Update to 1.10. 
* gnu/packages/compression.scm (clzip): Update to 1.10.
 2018-02-16 11:11:39 +01:00
Tobias Geerinckx-Rice 910992e46d
gnu: lziprecover: Update to 1.20. 
* gnu/packages/compression.scm (lziprecover): Update to 1.20.
 2018-02-16 11:11:38 +01:00
Tobias Geerinckx-Rice bf86770950
gnu: pbzip2: Update to 1.1.13. 
* gnu/packages/compression.scm (pbzip2): Update to 1.1.13.
 2018-02-16 11:11:38 +01:00
Tobias Geerinckx-Rice 6f465a5103
gnu: lzop: Use HTTPS home page. 
* gnu/packages/compression.scm (lzop)[home-page]: Use HTTPS.
 2018-02-16 11:11:38 +01:00
Tobias Geerinckx-Rice 89d159fef8
gnu: lzop: Update to 1.04. 
* gnu/packages/compression.scm (lzop): Update to 1.04.
 2018-02-16 11:11:38 +01:00
Ludovic Courtès 469069b6e8
gnu: ldc: Increase 'max-silent-time'. 
Reported by Pjotr Prins <pjotr.public12@thebird.nl>.

* gnu/packages/ldc.scm (ldc-bootstrap)[properties]: New field.
 2018-02-16 11:10:12 +01:00
Leo Famulari 0840678342
gnu: quagga: Update to 1.2.3 [security fixes]. 
See the advisories at
<https://git.savannah.gnu.org/cgit/quagga.git/tree/doc/security?h=quagga-1.2.3>
for more information about the security-related bugs fixed in this
release.

* gnu/packages/networking.scm (quagga): Update to 1.2.3.
 2018-02-15 21:47:07 -05:00
David Thompson 6ca86ed7a3
gnu: python-botocore: Update to 1.8.43. 
* gnu/packages/python.scm (python-botocore): Update to 1.8.43.
 2018-02-15 19:22:15 -05:00
Hartmut Goebel b907b36419
gnu: Add kholidays. 
* gnu/packages/kde.scm(kholidays): New variable.
 2018-02-15 23:26:21 +01:00
Alex Vong f3bbe0291b
gnu: java-fasterxml-jackson-dataformat-xml: Update to 2.9.4. 
* gnu/packages/java.scm (java-fasterxml-jackson-dataformat-xml): Update
to 2.9.4.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-02-15 17:18:27 -05:00
Alex Vong 1f2be88f26
gnu: java-fasterxml-jackson-dataformat-yaml: Update to 2.9.4. 
* gnu/packages/java.scm (java-fasterxml-jackson-dataformat-yaml): Update
to 2.9.4.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-02-15 17:18:27 -05:00
Alex Vong 07207211df
gnu: java-fasterxml-jackson-modules-base-jaxb: Update to 2.9.4. 
* gnu/packages/java.scm (java-fasterxml-jackson-modules-base-jaxb):
Update to 2.9.4.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-02-15 17:18:27 -05:00
Alex Vong 3c1edff5ca
gnu: java-fasterxml-jackson-databind: Update to 2.9.4 [fixes CVE-{2017-17485, 2018-5968}]. 
* gnu/packages/java.scm (java-fasterxml-jackson-databind): Update to 2.9.4.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-02-15 17:18:27 -05:00
Alex Vong 38a0fc384a
gnu: java-fasterxml-jackson-core: Update to 2.9.4. 
* gnu/packages/java.scm (java-fasterxml-jackson-core): Update to 2.9.4.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-02-15 17:18:26 -05:00
Alex Vong 93dceea45e
gnu: java-fasterxml-jackson-annotations: Update to 2.9.4. 
* gnu/packages/java.scm (java-fasterxml-jackson-annotations): Update to 2.9.4.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-02-15 17:18:26 -05:00
Ben Woodcroft 5ebc8e7f41
gnu: diamond: Update to 0.9.18. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.18.
 2018-02-16 08:13:24 +10:00
Pjotr Prins aabcb6e57c
gnu: python-elasticsearch: Update to 6.1.1. 
* gnu/packages/python-web.scm (python-elasticsearch, python2-elasticsearch):
Update to 6.1.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-02-15 16:57:12 -05:00
Hartmut Goebel 34581f68c0
gnu: Add bpython. 
* gnu/packages/python.scm (bpython, bpython2): New variables.
 2018-02-15 21:44:07 +01:00
Hartmut Goebel e79a8424ca
gnu: Add python-curtsies. 
* gnu/packages/terminals.scm (python-curtsies, python2-curtsies): New
  variables.
 2018-02-15 21:44:06 +01:00
Hartmut Goebel 573450e60c
gnu: Add python-blessings. 
* gnu/packages/terminals.scm (python-blessings, python2-blessings): New
  variables.
 2018-02-15 21:44:06 +01:00
Hartmut Goebel 46ddcf4a29
gnu: Add python-pyte. 
* gnu/packages/terminals.scm (python-pyte, python2-pyte): New variables.
 2018-02-15 21:44:06 +01:00
Leo Famulari 3026de3fce
gnu: irssi: Update to 1.1.1 [fixes CVE-2018-{7050,7051,7052,7053,7054}]. 
* gnu/packages/irc.scm (irssi): Update to 1.1.1.
 2018-02-15 14:41:26 -05:00
Oleg Pykhalov 5b23829299
gnu: Add epipe. 
* gnu/packages/emacs.scm (epipe): New public variable.
 2018-02-15 20:45:45 +03:00
Danny Milosavljevic a124e4258a
gnu: ghc: Make memory allocator decommit memory on Linux < 4.5. 
* gnu/packages/patches/ghc-8.0-fall-back-to-madv_dontneed.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/haskell.scm (ghc-8): Use it.
 2018-02-15 17:27:50 +01:00
Ricardo Wurmus 4aa0a1df2d
gnu: java-jeromq: Update to 0.4.3. 
* gnu/packages/java.scm (java-jeromq): Update to 0.4.3.
[arguments]: Disable DealerSpecTest.
 2018-02-15 17:19:09 +01:00
Ricardo Wurmus 36b39d1618
gnu: java-testng: Update to 6.14.2. 
* gnu/packages/java.scm (java-testng): Update to 6.14.2.
[arguments]: Delete failing tests and those requiring groovy.
[native-inputs]: Add java-mockito-1.
 2018-02-15 17:19:06 +01:00
Ricardo Wurmus 152d30c346
gnu: Add python-loompy. 
* gnu/packages/bioinformatics.scm (python-loompy): New variable.
 2018-02-15 17:19:00 +01:00
Ricardo Wurmus 3082de04c2
gnu: Add r-dropbead. 
* gnu/packages/bioinformatics.scm (r-dropbead): New variable.
 2018-02-15 17:18:54 +01:00
Ricardo Wurmus 05f7296012
gnu: Add r-delayedmatrixstats. 
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): New variable.
 2018-02-15 17:18:52 +01:00
Ricardo Wurmus fc162dbaec
gnu: Add python-typing. 
* gnu/packages/python.scm (python-typing, python2-typing): New variables.
 2018-02-15 17:18:50 +01:00
Ricardo Wurmus 130d290e29
gnu: Add python-future-fstrings. 
* gnu/packages/python.scm (python-future-fstrings): New variable.
 2018-02-15 17:18:46 +01:00
Ricardo Wurmus 8b2ad13b19
gnu: Add python-tokenize-rt. 
* gnu/packages/python.scm (python-tokenize-rt): New variable.
 2018-02-15 17:18:43 +01:00
Ricardo Wurmus e035589482
gnu: augeas: Update to 1.10.1. 
* gnu/packages/augeas.scm (augeas): Update to 1.10.1.
 2018-02-15 17:17:19 +01:00
Ludovic Courtès ec0f3d0a5b
gnu: ifdtool: Fix Texinfo markup. 
* gnu/packages/flashing-tools.scm (ifdtool)[description]: Fix Texinfo
markup.
 2018-02-15 16:35:39 +01:00
Danny Milosavljevic 8e60743d8b
gnu: me-cleaner: Update synopsis. 
* gnu/packages/flashing-tools.scm (me-cleaner)[synopsis]: Modify.
 2018-02-15 15:01:39 +01:00
Danny Milosavljevic 7e0a6fac0b
services: mingetty: Move tty optionality to agetty. 
Follow-up to 5a9902c8ac.

* gnu/services/base.scm (mingetty-shepherd-service): Move tty optionality check to...
(agetty-shepherd-service): ...here.
 2018-02-15 12:32:18 +01:00
Danny Milosavljevic 0297a160a0
gnu: Add me-cleaner. 
* gnu/packages/flashing-tools.scm (me-cleaner): New variable.
 2018-02-15 12:05:25 +01:00
Danny Milosavljevic 9721c0b6ef
gnu: Add intelmetool. 
* gnu/packages/flashing-tools.scm (intelmetool): New variable.
 2018-02-15 12:05:24 +01:00
Danny Milosavljevic 501e184716
gnu: Add ifdtool. 
* gnu/packages/flashing-tools.scm (ifdtool): New variable.
 2018-02-15 12:05:24 +01:00
Danny Milosavljevic 5a9902c8ac
services: agetty: Add agetty instance to base services. Make its tty optional. 
* gnu/services/base.scm (%base-services): Instantiate agetty-service.
(default-serial-port): New variable.
(agetty-shepherd-service): Make tty optional, default to the above.
* doc/guix.texi (agetty-configuration): Update "tty" documentation.
* gnu/system/install.scm (agetty-default-service): Delete variable.
(embedded-installation-os): Remove agetty-default-service instance.
Add "console" kernel-argument.
 2018-02-15 12:05:21 +01:00
Ludovic Courtès 2b870303e7
gnu: cuirass: Update to 4ab2f2c. 
Previous revision had (web server fiberized) installed in the wrong
place, and would thus fail to start.

* gnu/packages/ci.scm (cuirass): Update to 4ab2f2c.
 2018-02-15 10:32:20 +01:00
Pierre Langlois 6ca15c9ef6
gnu: crypto++: Update to 6.0.0. 
* gnu/packages/crypto.scm (crypto++): Update to 6.0.0.
* gnu/packages/patches/crypto++-fix-dos-in-asn.1-decoders.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-15 10:23:42 +01:00
Ludovic Courtès 9859b5c190
gnu: nss-mdns: Update to 0.12.0. 
* gnu/packages/avahi.scm (nss-mdns): Update to 0.12 + patch.
(nss-mdns-0.10.0): Remove.
* gnu/services/avahi.scm (avahi-service-type): Use NSS-MDNS again.
 2018-02-15 10:16:00 +01:00
Ludovic Courtès d1688e6ad4
gnu: cuirass: Update to 8080c17. 
* gnu/packages/ci.scm (cuirass): Update to 8080c17.
[inputs]: Add GUILE-FIBERS.
[arguments] <wrap-program>: Add Fibers to the search path in the
wrapper.
 2018-02-14 23:44:28 +01:00
Ludovic Courtès 499e499b8e
gnu: guile-sqlite3: Update to 10c13a7. 
* gnu/packages/guile.scm (guile-sqlite3): Update to 10c13a7.
 2018-02-14 23:38:22 +01:00
Julien Lepiller 08da664d10
gnu: Add cat-avatar-generator-service. 
* gnu/services/web.scm (cat-avatar-generator-service): New variable.
* doc/guix.text (Web Services): Document it.
 2018-02-14 23:18:41 +01:00
Julien Lepiller 3bedac5057
gnu: Add cat-avatar-generator. 
* gnu/packages/web.scm (cat-avatar-generator): New variable.
 2018-02-14 23:15:16 +01:00
Tobias Geerinckx-Rice f2ba6fc8bb
gnu: yadifa: Update to 2.3.8. 
* gnu/packages/dns.scm (yadifa): Update to 2.3.8.
 2018-02-14 20:39:53 +01:00
Marius Bakke 1bd08a268a
gnu: strace: Update to 4.21. 
* gnu/packages/linux.scm (strace): Update to 4.21.
[source](uri): Releases are now served from GitHub.
 2018-02-14 20:23:19 +01:00
Marius Bakke 1a46a6d02d
gnu: fio: Update to 3.4. 
* gnu/packages/benchmark.scm (fio): Update to 3.4.
 2018-02-14 20:23:19 +01:00
Oleg Pykhalov ac07b94ab5
gnu: Add emacs-scratch-el. 
* gnu/packages/emacs.scm (emacs-scratch-el): New public variable.
 2018-02-14 15:54:26 +03:00
Mark H Weaver 5fe9ba59ba
gnu: magit: Do not set 'magit-git-executable' to absolute file name. 
Fixes <https://bugs.gnu.org/30434>.
Reported by Ricardo Wurmus <rekado@elephly.net>.

* gnu/packages/emacs.scm (magit)[arguments]: Do not modify the default value
of 'magit-git-executable'.  Remove "#:modules" and "#:imported-modules".
 2018-02-14 03:48:20 -05:00
Mark H Weaver 84fe44201b
gnu: magit: Do not set 'magit-git-executable' to absolute file name. 
Fixes <https://bugs.gnu.org/30434>.
Reported by Ricardo Wurmus <rekado@elephly.net>.

* gnu/packages/emacs.scm (magit)[arguments]: Do not modify the default value
of 'magit-git-executable'.  Remove "#:modules" and "#:imported-modules".
 2018-02-14 03:42:07 -05:00
Mark H Weaver 02843215d8
gnu: shepherd: 'herd status' now sorts the result. 
Add a patch by Ludovic Courtès <ludo@gnu.org> from the upstream
shepherd repository to partially fix <https://bugs.gnu.org/30299>.

* gnu/packages/patches/shepherd-herd-status-sorted.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (shepherd)[source]: Add patch.
 2018-02-14 03:42:02 -05:00
Mark H Weaver 932c98326d
Merge branch 'master' into core-updates 2018-02-14 03:40:08 -05:00
Rutger Helling 870541d6a7
gnu: mpv: Enable Vulkan support. 
* gnu/packages/video.scm (mpv)[inputs]: Add shaderc and vulkan-icd-loader.
 2018-02-14 08:18:58 +01:00
Rutger Helling 5b69baf0ad
gnu: Add shaderc. 
* gnu/packages/vulkan.scm (shaderc): New variable.
 2018-02-14 08:18:58 +01:00
Mark H Weaver c5971d473d
gnu: icecat: Add more fixes from upstream mozilla-esr52. 
* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the
upstream mozilla-esr52 repository.
 2018-02-13 19:53:35 -05:00
Marius Bakke 4af55f7657
gnu: freeipmi: Update to 1.6.1. 
* gnu/packages/freeipmi.scm (freeipmi): Update to 1.6.1.
 2018-02-13 23:52:39 +01:00
Danny Milosavljevic a32f9b59ab
system: make-u-boot-package: Install configuration file. 
* gnu/packages/bootloaders.scm (make-u-boot-package): Install configuration
file.
 2018-02-13 23:23:25 +01:00
Marius Bakke b2b2ba40c3
gnu: efivar: Update to 34. 
* gnu/packages/linux.scm (efivar): Update to 34.
[arguments]: Add CC_FOR_BUILD=gcc to #:make-flags.
 2018-02-13 23:02:03 +01:00
Marius Bakke 8b114e5bd9
gnu: feh: Update to 2.23.2. 
* gnu/packages/image-viewers.scm (feh): Update to 2.23.2.
 2018-02-13 23:02:03 +01:00
Ben Woodcroft 119c09c219
gnu: vsearch: Update to 2.7.0. 
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.7.0.
 2018-02-14 07:43:19 +10:00
Efraim Flashner 34a7b7d713
gnu: libdvdnav@4: Remove variable. 
* gnu/packages/video.scm (libdvdnav@4): Remove variable.
 2018-02-13 22:56:51 +02:00
Efraim Flashner 0976ea38b1
gnu: libdvdnav: Update to 6.0.0. 
* gnu/packages/video.scm (libdvdnav): Update to 6.0.0.
 2018-02-13 22:56:50 +02:00
Efraim Flashner 3c9deb0b11
gnu: libdvdread: Update to 6.0.0. 
* gnu/packages/video.scm (libdvdread): Update to 6.0.0.
 2018-02-13 22:56:50 +02:00
Efraim Flashner 975c715a41
gnu: x265: Update to 2.6. 
* gnu/packages/video.scm (x265): Update to 2.6.
 2018-02-13 22:56:48 +02:00
Efraim Flashner 1373ce7ce0
gnu: ffmpeg: Update to 3.4.2. 
* gnu/packages/video.scm (ffmpeg): Update to 3.4.2.
 2018-02-13 22:56:44 +02:00
Leo Famulari 5c4fd60416
gnu: python-icalendar: Update to 4.0.1. 
* gnu/packages/python.scm (python-icalendar): Update to 4.0.1.
 2018-02-13 14:33:22 -05:00
Mark H Weaver 288b8fd5e9
Merge branch 'master' into core-updates 2018-02-13 13:17:15 -05:00
Mark H Weaver acff6aa004
gnu: linux-libre: Update to 4.15.3. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.15.3.
(%linux-libre-hash): Update hash.
 2018-02-13 13:08:30 -05:00
Mark H Weaver 146be91dda
gnu: linux-libre@4.14: Update to 4.14.19. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.19.
(%linux-libre-4.14-hash): Update hash.
 2018-02-13 13:07:48 -05:00
Mark H Weaver 47b731b372
gnu: linux-libre@4.9: Update to 4.9.81. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.81.
 2018-02-13 13:06:28 -05:00
Ricardo Wurmus 117c83bdc7
gnu: r-htmltable: Update to 1.11.2. 
* gnu/packages/web.scm (r-htmltable): Update to 1.11.2.
[propagated-inputs]: Remove r-dplyr and r-tidyr.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus 7d358f33d8
gnu: r-htmlwidgets: Update to 1.0. 
* gnu/packages/web.scm (r-htmlwidgets): Update to 1.0.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus 1ee14481d2
gnu: r-lubridate: Update to 1.7.2. 
* gnu/packages/statistics.scm (r-lubridate): Update to 1.7.2.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus 4ff5fc6fa0
gnu: r-ranger: Update to 0.9.0. 
* gnu/packages/statistics.scm (r-ranger): Update to 0.9.0.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus f9ee1741f9
gnu: r-lme4: Update to 1.1-15. 
* gnu/packages/statistics.scm (r-lme4): Update to 1.1-15.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus 45ec40818b
gnu: r-quantreg: Update to 5.35. 
* gnu/packages/statistics.scm (r-quantreg): Update to 5.35.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus 725673ad6f
gnu: r-rcppeigen: Update to 0.3.3.4.0. 
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.3.4.0.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus c71cd58240
gnu: r-pbapply: Update to 1.3-4. 
* gnu/packages/statistics.scm (r-pbapply): Update to 1.3-4.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus f66a34fcc4
gnu: r-vgam: Update to 1.0-5. 
* gnu/packages/statistics.scm (r-vgam): Update to 1.0-5.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus 09da3d4403
gnu: r-fpc: Update to 2.1-11. 
* gnu/packages/statistics.scm (r-fpc): Update to 2.1-11.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus 23fb604725
gnu: r-pcapp: Update to 1.9-73. 
* gnu/packages/statistics.scm (r-pcapp): Update to 1.9-73.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus fe394eac82
gnu: r-zoo: Update to 1.8-1. 
* gnu/packages/statistics.scm (r-zoo): Update to 1.8-1.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus b216fdf21f
gnu: r-hmisc: Update to 4.1-1. 
* gnu/packages/statistics.scm (r-hmisc): Update to 4.1-1.
 2018-02-13 16:18:45 +01:00
Ricardo Wurmus c4f148ab0a
gnu: r-tidyr: Update to 0.8.0. 
* gnu/packages/statistics.scm (r-tidyr): Update to 0.8.0.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus be8db0a0ab
gnu: r-viridislite: Update to 0.3.0. 
* gnu/packages/statistics.scm (r-viridislite): Update to 0.3.0.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus 9604af890d
gnu: r-viridis: Update to 0.5.0. 
* gnu/packages/statistics.scm (r-viridis): Update to 0.5.0.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus a46c71924c
gnu: r-matrixstats: Update to 0.53.1. 
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.53.1.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus e04b71a83b
gnu: r-mvtnorm: Update to 1.0-7. 
* gnu/packages/statistics.scm (r-mvtnorm): Update to 1.0-7.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus f7d7dd41f1
gnu: r-r-rsp: Update to 0.42.0. 
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.42.0.
[propagated-inputs]: Add r-digest.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus 2cd6bb5da4
gnu: r-r-cache: Update to 0.13.0. 
* gnu/packages/statistics.scm (r-r-cache): Update to 0.13.0.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus 48237fde89
gnu: r-bigmemory: Update to 4.5.33. 
* gnu/packages/statistics.scm (r-bigmemory): Update to 4.5.33.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus a566b3f9e6
gnu: r-synchronicity: Update to 1.3.2. 
* gnu/packages/statistics.scm (r-synchronicity): Update to 1.3.2.
[propagated-inputs]: Add r-uuid.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus 8ff6853c13
gnu: r-irlba: Update to 2.3.2. 
* gnu/packages/statistics.scm (r-irlba): Update to 2.3.2.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus a63117c8ae
gnu: r-dt: Update to 0.4. 
* gnu/packages/statistics.scm (r-dt): Update to 0.4.
[propagated-inputs]: Add r-crosstalk.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus 1324f85b43
gnu: r-rprojroot: Update to 1.3-2. 
* gnu/packages/statistics.scm (r-rprojroot): Update to 1.3-2.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus edab1c049b
gnu: r-hms: Update to 0.4.1. 
* gnu/packages/statistics.scm (r-hms): Update to 0.4.1.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus 80f72101b4
gnu: r-withr: Update to 2.1.1. 
* gnu/packages/statistics.scm (r-withr): Update to 2.1.1.
[propagated-inputs]: Remove r-lattice.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus ecba783c29
gnu: r-git2r: Update to 0.21.0. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.21.0.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus 9fb6e62ef5
gnu: r-openssl: Update to 1.0. 
* gnu/packages/statistics.scm (r-openssl): Update to 1.0.
 2018-02-13 16:18:44 +01:00
Ricardo Wurmus 78e03a761c
gnu: r-xml2: Update to 1.2.0. 
* gnu/packages/statistics.scm (r-xml2): Update to 1.2.0.
[native-inputs]: Add pkg-config.
[propagated-inputs]: Remove r-bh.
[inputs]: Add zlib.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus 2afbaab56c
gnu: r-chron: Update to 2.3-52. 
* gnu/packages/statistics.scm (r-chron): Update to 2.3-52.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus 172b63e436
gnu: r-dbplyr: Update to 1.2.0. 
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.2.0.
[propagated-inputs]: Add r-tidyselect.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus 59b62f197d
gnu: r-tibble: Update to 1.4.2. 
* gnu/packages/statistics.scm (r-tibble): Update to 1.4.2.
[propagated-inputs]: Add r-cli, r-crayon, and r-pillar; remove r-rcpp.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus 7387d35228
gnu: r-rlang: Update to 0.1.6. 
* gnu/packages/statistics.scm (r-rlang): Update to 0.1.6.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus c36ac74005
gnu: r-microbenchmark: Update to 1.4-4. 
* gnu/packages/statistics.scm (r-microbenchmark): Update to 1.4-4.
[propagated-inputs]: Remove r-ggplot2.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus ab3330e174
gnu: r-knitr: Update to 1.19. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.19.
[propagated-inputs]: Remove r-digest.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus d222070ad4
gnu: r-estimability: Update to 1.3. 
* gnu/packages/statistics.scm (r-estimability): Update to 1.3.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus 71d2f03be3
gnu: r-digest: Update to 0.6.15. 
* gnu/packages/statistics.scm (r-digest): Update to 0.6.15.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus ff1197c86e
gnu: r-rpart: Update to 4.1-12. 
* gnu/packages/statistics.scm (r-rpart): Update to 4.1-12.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus 6aa4be9c3c
gnu: r-mgcv: Update to 1.8-23. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-23.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus 4c9264c1b9
gnu: r-mass: Update to 7.3-48. 
* gnu/packages/statistics.scm (r-mass): Update to 7.3-48.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus 97bf74076c
gnu: r-gprofiler: Update to 0.6.3. 
* gnu/packages/bioinformatics.scm (r-gprofiler): Update to 0.6.3.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus 169942368f
gnu: r-ensembldb: Update to 2.2.1. 
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.2.1.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus 34d077b8bc
gnu: r-gage: Update to 2.28.2. 
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.28.2.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus f5f9442703
gnu: r-keggrest: Update to 1.18.1. 
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.18.1.
 2018-02-13 16:18:43 +01:00
Ricardo Wurmus 26e3e28cc9
gnu: r-seurat: Update to 2.2.0. 
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.2.0.
[propagated-inputs]: Remove r-ggjoy; add r-rcppeigen and r-ggridges.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus 53f0dea9d7
gnu: r-msnbase: Update to 2.4.2. 
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.4.2.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus b1f2753627
gnu: r-methylkit: Update to 1.4.1. 
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.4.1.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus 5ef76bc28c
gnu: r-gkmsvm: Update to 0.79.0. 
* gnu/packages/bioinformatics.scm (r-gkmsvm): Update to 0.79.0.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus 0b24dc95b5
gnu: r-wgcna: Update to 1.62. 
* gnu/packages/bioinformatics.scm (r-wgcna): Update to 1.62.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus e1129446ec
gnu: r-genomation: Update to 1.11.3. 
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.11.3.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus 0b18856532
gnu: r-genomicfeatures: Update to 1.30.3. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.30.3.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus 99b3236e65
gnu: r-rtracklayer: Update to 1.38.3. 
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.38.3.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus c37b361e44
gnu: r-summarizedexperiment: Update to 1.8.1. 
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.8.1.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus 373430672d
gnu: r-biomart: Update to 2.34.2. 
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.34.2.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus 024f19c68b
gnu: r-genomicranges: Update to 1.30.1. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.30.1.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus 0674657908
gnu: r-limma: Update to 3.34.8. 
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.34.8.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus 5fb1fee67b
gnu: r-variantannotation: Update to 1.24.5. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.24.5.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus d22abe1e5d
gnu: r-edger: Update to 3.20.8. 
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.20.8.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus 66ae706c24
gnu: r-bookdown: Update to 0.6. 
* gnu/packages/bioinformatics.scm (r-bookdown): Update to 0.6.
[propagated-inputs]: Add r-xfun and ghc-pandoc.
 2018-02-13 16:18:42 +01:00
Ricardo Wurmus 2e9da3390c
gnu: r-vegan: Update to 2.4-6. 
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-6.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus 0f001b3c5a
gnu: r-drr: Update to 0.0.3. 
* gnu/packages/cran.scm (r-drr): Update to 0.0.3.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus 92e4534ca8
gnu: r-lava: Update to 1.6. 
* gnu/packages/cran.scm (r-lava): Update to 1.6.
[propagated-inputs]: Add r-squarem.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus 093acd0de1
gnu: r-sp: Update to 1.2-7. 
* gnu/packages/cran.scm (r-sp): Update to 1.2-7.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus de1c0332d9
gnu: r-proxy: Update to 0.4-21. 
* gnu/packages/cran.scm (r-proxy): Update to 0.4-21.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus e30b878ec8
gnu: r-hexbin: Update to 1.27.2. 
* gnu/packages/statistics.scm (r-hexbin): Update to 1.27.2.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus 64fe220cbe
gnu: r-dendextend: Update to 1.7.0. 
* gnu/packages/cran.scm (r-dendextend): Update to 1.7.0.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus cb471b7eaa
gnu: r-ddalpha: Update to 1.3.1.1. 
* gnu/packages/cran.scm (r-ddalpha): Update to 1.3.1.1.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus 1d13426bed
gnu: r-recipes: Update to 0.1.2. 
* gnu/packages/cran.scm (r-recipes): Update to 0.1.2.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus 637584253f
gnu: r-pracma: Update to 2.1.4. 
* gnu/packages/maths.scm (r-pracma): Update to 2.1.4.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus 1c7919251a
gnu: Add r-uuid. 
* gnu/packages/cran.scm (r-uuid): New variable.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus c555ccabcf
gnu: Add r-pillar. 
* gnu/packages/cran.scm (r-pillar): New variable.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus f244296822
gnu: Add r-utf8. 
* gnu/packages/cran.scm (r-utf8): New variable.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus c5f033e0f6
gnu: Add r-squarem. 
* gnu/packages/cran.scm (r-squarem): New variable.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus fe5b889365
gnu: r-shape: Update to 1.4.4. 
* gnu/packages/cran.scm (r-shape): Update to 1.4.4.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus 33d8699da5
gnu: r-rcpp: Update to 0.12.15. 
* gnu/packages/cran.scm (r-rcpp): Update to 0.12.15.
 2018-02-13 16:18:41 +01:00
Ricardo Wurmus f6d2b45ca8
gnu: Add r-xfun. 
* gnu/packages/cran.scm (r-xfun): New variable.
 2018-02-13 16:18:41 +01:00
Leo Famulari 77737e0354
gnu: unzip: Mitigate CVE-2018-1000035. 
* gnu/packages/compression.scm (unzip)[replacement]: New field.
(unzip/fixed): New variable.
 2018-02-13 09:51:07 -05:00
Ricardo Wurmus ad5de226e7
gnu: Add ghc-megaparsec. 
* gnu/packages/haskell.scm (ghc-megaparsec): New variable.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus aeecabd43c
gnu: Add ghc-parser-combinators. 
* gnu/packages/haskell.scm (ghc-parser-combinators): New variable.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus f941a52a14
gnu: Add ghc-text-binary. 
* gnu/packages/haskell.scm (ghc-text-binary): New variable.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus 183d1b1aaf
gnu: ghc-trifecta: Update to 1.7.1.1. 
* gnu/packages/haskell.scm (ghc-trifecta): Update to 1.7.1.1.
[inputs]: Add ghc-doctest.
[native-inputs]: Add cabal-doctest.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus 2815963b8d
gnu: ghc-reducers: Update to 3.12.2. 
* gnu/packages/haskell.scm (ghc-reducers): Update to 3.12.2.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus 67e86e58e0
gnu: ghc-directory: Add note. 
* gnu/packages/haskell.scm (ghc-directory): Add comment not to use this
package as an input.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus 0498d1689d
gnu: darcs: Update to 2.12.5. 
* gnu/packages/version-control.scm (darcs): Update to 2.12.5.
[arguments]: Relax version constraint on shelly.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus 97bfe0d759
gnu: darcs: Remove ghc-directory from inputs. 
* gnu/packages/version-control.scm (darcs)[inputs]: Remove ghc-directory.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus 4b1f2166fe
gnu: ghc-graphviz: Fix build with newer QuickCheck. 
* gnu/packages/haskell.scm (ghc-graphviz)[arguments]: Allow building with
newer QuickCheck.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus f25c95d384
gnu: ghc-tar: Disable tests. 
* gnu/packages/haskell.scm (ghc-tar)[arguments]: Disable tests.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus 1b58d289fd
gnu: ghc-system-filepath: Update to 0.4.14. 
* gnu/packages/haskell.scm (ghc-system-filepath): Update to 0.4.14.
[arguments]: Disable tests.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus da76c6de87
gnu: darcs: Remove ghc-process from inputs. 
* gnu/packages/version-control.scm (darcs)[inputs]: Remove ghc-process.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus 831cb41906
gnu: ghc-hslogger: Remove ghc-process from inputs. 
* gnu/packages/haskell.scm (ghc-hslogger)[inputs]: Remove ghc-process.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus 64f597a611
gnu: ghc-process: Update to 1.6.3.0. 
* gnu/packages/haskell.scm (ghc-process): Update to 1.6.3.0.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus 973075a091
gnu: ghc-haskeline: Update to 0.7.4.2. 
* gnu/packages/haskell.scm (ghc-haskeline): Update to 0.7.4.2.
[inputs]: Add ghc-stm.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus 54afb52e1f
gnu: ghc-fgl-arbitrary: Fix build with newer QuickCheck. 
* gnu/packages/haskell.scm (ghc-fgl-arbitrary)[arguments]: Allow building with
newer QuickCheck.
 2018-02-13 13:37:41 +01:00
Ricardo Wurmus c0a541cba8
gnu: ghc-fgl: Fix build with newer QuickCheck. 
* gnu/packages/haskell.scm (ghc-fgl)[arguments]: Allow building with newer
QuickCheck.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus a49bb332a1
gnu: ghc-pandoc-citeproc: Update to 0.12.2.5. 
* gnu/packages/haskell.scm (ghc-pandoc-citeproc): Update to 0.12.2.5.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 1ddcb5e300
gnu: ghc-hs-bibutils: Update to 6.2.0.1. 
* gnu/packages/haskell.scm (ghc-hs-bibutils): Update to 6.2.0.1.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 1afa5abbe8
gnu: ghc-pandoc: Update to 2.0.6. 
* gnu/packages/haskell.scm (ghc-pandoc): Update to 2.0.6.
[inputs]: Add ghc-aeson-pretty, ghc-cmark-gfm, ghc-doctemplates, ghc-glob,
ghc-hslua-module-text, ghc-old-locale, ghc-skylighting, and ghc-split; remove
ghc-ansi-terminal, ghc-cmark, ghc-extensible-exceptions, ghc-filemanip,
ghc-highlighting-kate, and ghc-old-time.
[native-inputs]: Remove ghc-test-framework, ghc-test-framework-hunit, and
ghc-test-framework-quickcheck2; add ghc-tasty, ghc-tasty-golden,
ghc-tasty-hunit, and ghc-tasty-quickcheck.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 009d0f6d74
gnu: ghc-monad-control: Update to 1.0.1.0. 
* gnu/packages/haskell.scm (ghc-monad-control): Update to 1.0.1.0.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 7c86efe776
gnu: ghc-optparse-applicative: Update to 0.13.0.0. 
* gnu/packages/haskell.scm (ghc-optparse-applicative): Update to 0.13.0.0.
[arguments]: Disable tests.
[native-inputs]: Add ghc-quickcheck.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus e41fad216d
gnu: ghc-connection: Update to 0.2.6. 
* gnu/packages/haskell.scm (ghc-connection): Update to 0.2.6.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 15009c14ed
gnu: ghc-socks: Update to 0.5.5. 
* gnu/packages/haskell.scm (ghc-socks): Update to 0.5.5.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 3a4181dfc0
gnu: ghc-hourglass: Update to 0.2.10. 
* gnu/packages/haskell.scm (ghc-hourglass): Update to 0.2.10.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 1e521705bf
gnu: ghc-mockery: Update to 0.3.3. 
* gnu/packages/haskell.scm (ghc-mockery): Update to 0.3.3.
[inputs]: Add ghc-base-compat.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 3869735729
gnu: ghc-logging-facade: Update to 0.1.1. 
* gnu/packages/haskell.scm (ghc-logging-facade): Update to 0.1.1.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 9e21b4a8b8
gnu: ghc-th-reify-many: Update to 0.1.6. 
* gnu/packages/haskell.scm (ghc-th-reify-many): Update to 0.1.6.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 165e5f6ef5
gnu: ghc-th-expand-syns: Update to 0.4.0.0. 
* gnu/packages/haskell.scm (ghc-th-expand-syns): Update to 0.4.0.0.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 416092e7dd
gnu: ghc-semigroupoids: Update to 5.1. 
* gnu/packages/haskell.scm (ghc-semigroupoids): Update to 5.1.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 38646a6272
gnu: ghc-lens: Update to 4.15.4. 
* gnu/packages/haskell.scm (ghc-lens): Update to 4.15.4.
[arguments]: Enable tests.
[inputs]: Add ghc-doctest-0.13 and ghc-call-stack.
[native-inputs]: Add cabal-doctest, ghc-hunit, ghc-test-framework,
ghc-test-framework-hunit, ghc-test-framework-th,
ghc-test-framework-quickcheck2, and ghc-quickcheck.

squash! gnu: ghc-lens: Update to 4.15.4.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 83d436198d
gnu: Add ghc-doctest-0.13. 
* gnu/packages/haskell.scm (ghc-doctest-0.13): New variable.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus 32ddba787a
gnu: Add ghc-call-stack. 
* gnu/packages/haskell.scm (ghc-call-stack): New variable.
 2018-02-13 13:37:40 +01:00
Ricardo Wurmus a54b744126
gnu: Add ghc-nanospec. 
* gnu/packages/haskell-check.scm (ghc-nanospec): New variable.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 29a2638654
gnu: ghc-xml-conduit: Update to 1.7.1.2 
* gnu/packages/haskell.scm (ghc-xml-conduit): Update to 1.7.1.2.
[inputs]: Remove ghc-blaze-builder and ghc-data-default; add
ghc-data-default-class.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 1e4a612263
gnu: ghc-conduit-extra: Update to 1.1.13.3. 
* gnu/packages/haskell.scm (ghc-conduit-extra): Update to 1.1.13.3.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 95260eb26d
gnu: ghc-lens: Update to 4.14. 
* gnu/packages/haskell.scm (ghc-lens): Update to 4.14.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 77c1e8b5b9
gnu: ghc-statevar: Update to 1.1.0.4. 
* gnu/packages/haskell.scm (ghc-statevar): Update to 1.1.0.4.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 88da6cdb1d
gnu: ghc-kan-extensions: Update to 5.0.1. 
* gnu/packages/haskell.scm (ghc-kan-extensions): Update to 5.0.1.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 95796f81a6
gnu: ghc-aeson-pretty: Update to 0.8.5. 
* gnu/packages/haskell-web.scm (ghc-aeson-pretty): Update to 0.8.5.
[inputs]: Add ghc-base-compat and ghc-scientific.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 64b5cce93a
gnu: ghc-blaze-html: Update to 0.9.0.1. 
* gnu/packages/haskell-web.scm (ghc-blaze-html): Update to 0.9.0.1.
[arguments]: Enable tests, allow building with newer QuickCheck.
[native-inputs]: Add ghc-hunit, ghc-quickcheck, ghc-test-framework,
ghc-test-framework-hunit, and ghc-test-framework-quickcheck2.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 969d0c6454
gnu: ghc-blaze-markup: Update to 0.8.2.0. 
* gnu/packages/haskell.scm (ghc-blaze-markup): Update to 0.8.2.0.
[arguments]: Enable tests.
[native-inputs]: Add ghc-hunit, ghc-quickcheck, ghc-tasty, ghc-tasty-hunit,
and ghc-tasty-quickcheck.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 14e9a39717
gnu: Add ghc-skylighting. 
* gnu/packages/haskell.scm (ghc-skylighting): New variable.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 8045d84d72
gnu: Add ghc-hslua-module-text. 
* gnu/packages/haskell.scm (ghc-hslua-module-text): New variable.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus e045c014b6
gnu: ghc-hslua: Update to 0.9.5. 
* gnu/packages/haskell.scm (ghc-hslua): Update to 0.9.5.
[inputs]: Update lua-5.1 to lua; add ghc-exceptions, ghc-fail, and ghc-mtl.
[native-inputs]: Remove ghc-hspec, ghc-hspec-contrib, hspec-discover, and
ghc-hunit; add ghc-tasty, ghc-tasty-expected-failure, ghc-tasty-hunit, and
ghc-tasty-quickcheck.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus ee448389cd
gnu: Add ghc-tasty-expected-failure. 
* gnu/packages/haskell-check.scm (ghc-tasty-expected-failure): New variable.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 4012ea04b4
gnu: Add ghc-doctemplates. 
* gnu/packages/haskell.scm (ghc-doctemplates): New variable.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 0ba940118f
gnu: Add ghc-cmark-gfm. 
* gnu/packages/haskell.scm (ghc-cmark-gfm): New variable.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus d3c398cf4e
gnu: ghc-tagsoup: Update to 0.14.3. 
* gnu/packages/haskell-web.scm (ghc-tagsoup): Update to 0.14.3.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus db6dbe194e
gnu: ghc-haskell-src-meta: Update to 0.8.0.2 
* gnu/packages/haskell.scm (ghc-haskell-src-meta): Update to 0.8.0.2.
[native-inputs]: Add ghc-hunit, ghc-test-framework, and
ghc-test-framework-hunit.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 080778a059
gnu: ghc-th-orphans: Update to 0.13.2. 
* gnu/packages/haskell.scm (ghc-th-orphans): Update to 0.13.2.
[inputs]: Add ghc-th-lift-instances.
 2018-02-13 13:37:39 +01:00
Ricardo Wurmus 57184328ff
gnu: ghc-fail: Disable haddock. 
* gnu/packages/haskell.scm (ghc-fail)[arguments]: Disable building Haddock
documentation.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus aad2e837b0
gnu: ghc-opengl: Update to 3.0.1.0. 
* gnu/packages/haskell.scm (ghc-opengl): Update to 3.0.1.0.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus a36c03b2a9
gnu: ghc-gluraw: Update to 2.0.0.2. 
* gnu/packages/haskell.scm (ghc-gluraw): Update to 2.0.0.2.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus 8951861c27
gnu: ghc-glut: Update to 2.7.0.10. 
* gnu/packages/haskell.scm (ghc-glut): Update to 2.7.0.10.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus 0ffea6f279
gnu: Add ghc-fixed. 
* gnu/packages/haskell.scm (ghc-fixed): New variable.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus e80e97b52e
gnu: ghc-openglraw: Update to 3.2.7.0. 
* gnu/packages/haskell.scm (ghc-openglraw): Update to 3.2.7.0.
[inputs]: Add ghc-fixed.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus ea9aaa6ed2
gnu: ghc-x509-system: Update to 1.6.4. 
* gnu/packages/haskell-crypto.scm (ghc-x509-system): Update to 1.6.4.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus 1705140577
gnu: ghc-x509-validation: Update to 1.6.5. 
* gnu/packages/haskell-crypto.scm (ghc-x509-validation): Update to 1.6.5.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus ac12129795
gnu: ghc-x509-store: Update to 1.6.2. 
* gnu/packages/haskell-crypto.scm (ghc-x509-store): Update to 1.6.2.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus 95298963e3
gnu: ghc-x509: Update to 1.6.4. 
* gnu/packages/haskell-crypto.scm (ghc-x509): Update to 1.6.4.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus b7032e192d
gnu: ghc-cryptonite: Update to 0.20. 
* gnu/packages/haskell-crypto.scm (ghc-cryptonite): Update to 0.20.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus 4406f47532
gnu: ghc-aeson-pretty: Update to 0.8.2. 
* gnu/packages/haskell-web.scm (ghc-aeson-pretty): Update to 0.8.2.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus e74e1ad610
gnu: ghc-aeson: Update to 1.2.4.0. 
* gnu/packages/haskell-web.scm (ghc-aeson): Update to 1.2.4.0.
[inputs]: Add ghc-base-compat, ghc-tagged, ghc-th-abstraction,
ghc-time-locale-compat, ghc-uuid-types, ghc-integer-logarithms,
ghc-base-orphans, ghc-base16-bytestring, ghc-generic-deriving,
ghc-test-framework, ghc-test-framework-hunit, ghc-test-framework-quickcheck2,
ghc-quickcheck-instances, and ghc-hashable-time; remove ghc-mtl and ghc-syb.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus 31b49f51c2
gnu: ghc-blaze-html: Update to 0.8.1.2. 
* gnu/packages/haskell-web.scm (ghc-blaze-html): Update to 0.8.1.2.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus 4815c5978c
gnu: ghc-mime-types: Update to 0.1.0.7. 
* gnu/packages/haskell-web.scm (ghc-mime-types): Update to 0.1.0.7.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus ecbb9b4129
gnu: ghc-xss-sanitize: Update to 0.3.5.7. 
* gnu/packages/haskell-web.scm (ghc-xss-sanitize): Update to 0.3.5.7.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus 915b12e94b
gnu: ghc-wai-extra: Update to 3.0.18. 
* gnu/packages/haskell-web.scm (ghc-wai-extra): Update to 3.0.18.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus 95f92da75b
gnu: ghc-wai-logger: Update to 2.3.0. 
* gnu/packages/haskell-web.scm (ghc-wai-logger): Update to 2.3.0.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus 92299af06c
gnu: ghc-http: Update to 4000.3.3. 
* gnu/packages/haskell-web.scm (ghc-http): Update to 4000.3.3.
 2018-02-13 13:37:38 +01:00
Ricardo Wurmus 93303a3a18
gnu: ghc-tagged: Update to 0.8.5. 
* gnu/packages/haskell.scm (ghc-tagged): Update to 0.8.5.
[inputs]: Add ghc-transformers-compat.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus bffa4663c1
gnu: ghc-binary: Update to 0.8.5.1. 
* gnu/packages/haskell.scm (ghc-binary): Update to 0.8.5.1.
[arguments]: Allow building with newer QuickCheck.
[inputs]: Move all from here...
[native-inputs]: ...to here.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus 307a0dcea3
gnu: ghc-diff: Update to 0.3.4. 
* gnu/packages/haskell.scm (ghc-diff): Update to 0.3.4.
[native-inputs]: Add ghc-quickcheck, ghc-test-framework, and
ghc-test-framework-quickcheck2.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus 8b0346f082
gnu: ghc-texmath: Update to 0.10.1.1. 
* gnu/packages/haskell.scm (ghc-texmath): Update to 0.10.1.1.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus 9d08707665
gnu: ghc-pandoc-types: Update to 1.17.3.1. 
* gnu/packages/haskell.scm (ghc-pandoc-types): Update to 1.17.3.1.
[arguments]: Allow using a newer QuickCheck.
[inputs]: Add ghc-string-qq; remove ghc-deepseq-generics.
[native-inputs]: Add ghc-quickcheck, ghc-test-framework,
ghc-test-framework-hunit, ghc-test-framework-quickcheck2, and ghc-hunit.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus 7044882ce7
gnu: ghc-bifunctors: Update to 5.5.2. 
* gnu/packages/haskell.scm (ghc-bifunctors): Update to 5.5.2.
[inputs]: Add ghc-base-orphans, ghc-comonad, ghc-th-abstraction, and
ghc-transformers-compat.
[native-inputs]: Add ghc-hspec, hspec-discover, and ghc-quickcheck.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus aebb8db289
gnu: ghc-mmorph: Update to 1.0.6. 
* gnu/packages/haskell.scm (ghc-mmorph): Update to 1.0.6.
[inputs]: Add ghc-mtl and ghc-transformers-compat.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus a7c0b95a5b
gnu: ghc-vector-binary-instances: Update to 0.2.4. 
* gnu/packages/haskell.scm (ghc-vector-binary-instances): Update to 0.2.4.
[inputs]: Remove ghc-cereal.
[native-inputs]: Add ghc-tasty and ghc-tasty-quickcheck.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus a25d3035c7
gnu: ghc-vault: Update to 0.3.0.6. 
* gnu/packages/haskell.scm (ghc-vault): Update to 0.3.0.6.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus e24399041f
gnu: ghc-parsec: Update to 3.1.11. 
* gnu/packages/haskell.scm (ghc-parsec): Update to 3.1.11.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus 86e9076de8
gnu: ghc-split: Update to 0.2.3.1. 
* gnu/packages/haskell.scm (ghc-split): Update to 0.2.3.1.
[source]: Remove snippet.
[inputs]: Move from here...
[native-inputs]: ...to here.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus 426f92ba8d
gnu: ghc-unordered-containers: Update to 0.2.7.1. 
* gnu/packages/haskell.scm (ghc-unordered-containers): Update to 0.2.7.1.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus fc9dd55802
gnu: ghc-case-insensitive: Update to 1.2.0.7. 
* gnu/packages/haskell.scm (ghc-case-insensitive): Update to 1.2.0.7.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus fef57b7363
gnu: ghc-parsers: Update to 0.12.4. 
* gnu/packages/haskell.scm (ghc-parsers): Update to 0.12.4.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus eff94e6bdc
gnu: ghc-pcre-light: Update to 0.4.0.4. 
* gnu/packages/haskell.scm (ghc-pcre-light): Update to 0.4.0.4.
[native-inputs]: Add pkg-config.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus de428d4dff
gnu: ghc-temporary: Update to 1.2.0.4. 
* gnu/packages/haskell.scm (ghc-temporary): Update to 1.2.0.4.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus c710d4e8f8
gnu: hscolour: Update to 1.24.1. 
* gnu/packages/haskell.scm (hscolour): Update to 1.24.1.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus 4854c7beb1
gnu: ghc-comonad: Update to 5. 
* gnu/packages/haskell.scm (ghc-comonad): Update to 5.
 2018-02-13 13:37:37 +01:00
Ricardo Wurmus c701ebab7b
gnu: ghc-streaming-commons: Update to 0.1.16. 
* gnu/packages/haskell.scm (ghc-streaming-commons): Update to 0.1.16.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus 4fa53bd32e
gnu: ghc-sdl-image: Update to 0.6.1.2. 
* gnu/packages/haskell.scm (ghc-sdl-image): Update to 0.6.1.2.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus 315118995a
gnu: Add ghc-hxt.. 
* gnu/packages/xml.scm (ghc-hxt.): New variable.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus 6f8deed6e3
gnu: Add ghc-hxt-regex-xmlschema. 
* gnu/packages/xml.scm (ghc-hxt-regex-xmlschema): New variable.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus e85de10877
gnu: Add ghc-hxt-unicode. 
* gnu/packages/xml.scm (ghc-hxt-unicode): New variable.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus 5c1cf7f30a
gnu: Add ghc-hxt-charproperties. 
* gnu/packages/xml.scm (ghc-hxt-charproperties): New variable.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus c2d30e31b9
gnu: ghc-distributive: Update to 0.5.3. 
* gnu/packages/haskell.scm (ghc-distributive): Update to 0.5.3.
[inputs]: Add ghc-base-orphans, ghc-semigroups, and ghc-generic-deriving.
[native-inputs]: Add ghc-doctest-0.12, cabal-doctest, hspec-discover and
ghc-hspec.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus 41faaff11f
gnu: Add ghc-doctest-0.12. 
* gnu/packages/haskell.scm (ghc-doctest-0.12): New variable.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus 3168796a3f
gnu: Add cabal-doctest. 
* gnu/packages/haskell.scm (cabal-doctest): New variable.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus 6b76b705c6
gnu: ghc-zlib: Update to 0.6.1.1. 
* gnu/packages/haskell.scm (ghc-zlib): Update to 0.6.1.1.
[arguments]: Disable tests.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus 4123cb7f1b
gnu: ghc-sdl-mixer: Update to 0.6.2.0. 
* gnu/packages/haskell.scm (ghc-sdl-mixer): Update to 0.6.2.0.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus 1d9d3ec25d
gnu: ghc-objectname: Update to 1.1.0.1. 
* gnu/packages/haskell.scm (ghc-objectname): Update to 1.1.0.1.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus b62bb812a7
gnu: ghc-resourcet: Update to 1.1.7.5. 
* gnu/packages/haskell.scm (ghc-resourcet): Update to 1.1.7.5.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus 4a1b5600dc
gnu: ghc-profunctors: Update to 5.2.2. 
* gnu/packages/haskell.scm (ghc-profunctors): Update to 5.2.2.
[inputs]: Add ghc-base-orphans, ghc-bifunctors, ghc-contravariant, and
ghc-semigroups.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus 3f229b1b9e
gnu: ghc-adjunctions: Update to 4.3. 
* gnu/packages/haskell.scm (ghc-adjunctions): Update to 4.3.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus f212b62826
gnu: ghc-doctest: Update to 0.11.0. 
* gnu/packages/haskell.scm (ghc-doctest): Update to 0.11.0.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus 2e67886e03
gnu: ghc-lifted-base: Update to 0.2.3.8. 
* gnu/packages/haskell.scm (ghc-lifted-base): Update to 0.2.3.8.
 2018-02-13 13:37:36 +01:00
Ricardo Wurmus e0894701ee
gnu: Add ghc-string-qq. 
* gnu/packages/haskell.scm (ghc-string-qq): New variable.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus 6d148d3bb6
gnu: ghc-parallel: Update to 3.2.1.0. 
* gnu/packages/haskell.scm (ghc-parallel): Update to 3.2.1.0.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus b85fbd9933
gnu: ghc-transformers-compat: Update to 0.5.1.4. 
* gnu/packages/haskell.scm (ghc-transformers-compat): Update to 0.5.1.4.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus 5b4f61701d
gnu: ghc-time: Update to 0.3.7. 
* gnu/packages/haskell.scm (ghc-time): Update to 0.3.7.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus 99c4e5616a
gnu: ghc-unix-compat: Update to 0.4.2.0. 
* gnu/packages/haskell.scm (ghc-unix-compat): Update to 0.4.2.0.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus 3295a6daf8
gnu: ghc-cereal: Update to 0.5.3.0. 
* gnu/packages/haskell.scm (ghc-cereal): Update to 0.5.3.0.
[native-inputs]: Add ghc-quickcheck, ghc-fail, ghc-test-framework, and
ghc-test-framework-quickcheck2.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus c7f321cff7
gnu: ghc-directory: Update to 1.3.2.0. 
* gnu/packages/haskell.scm (ghc-directory): Update to 1.3.2.0.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus 1e85b2ab9d
gnu: ghc-shelly: Update to 1.7.0.1. 
* gnu/packages/haskell.scm (ghc-shelly): Update to 1.7.0.1.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus 780185cca3
gnu: hlint: Update to 2.1. 
* gnu/packages/haskell.scm (hlint): Update to 2.1.
[inputs]: Add ghc-unordered-containers, ghc-yaml, ghc-vector, ghc-text,
ghc-data-default, ghc-haskell-src-exts-util, ghc-refact, and ghc-aeson.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus e1358124aa
gnu: ghc-cheapskate: Update to 0.1.1. 
* gnu/packages/haskell.scm (ghc-cheapskate): Update to 0.1.1.
[inputs]: Remove ghc-aeson, ghc-http-types, ghc-wai-extra, and ghc-wai.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus f707b243c6
gnu: ghc-haskell-src-exts: Update to 1.20.1. 
* gnu/packages/haskell.scm (ghc-haskell-src-exts: Update): Update to 1.20.1.
[inputs]: Remove ghc-syb.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus e0ba59a9f8
gnu: Add ghc-pretty-show-for-haskell-src-exts. 
* gnu/packages/haskell.scm (ghc-pretty-show-for-haskell-src-exts): New
variable.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus fe4f81bc6f
gnu: ghc-yaml: Update to 0.8.28. 
* gnu/packages/haskell.scm (ghc-yaml): Update to 0.8.28.
[inputs]: Add ghc-semigroups and ghc-temporary; remove ghc-aeson-qq.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus bc819cdf4c
gnu: ghc-word8: Update to 0.1.3. 
* gnu/packages/haskell.scm (ghc-word8): Update to 0.1.3.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus 4fe3ce822f
gnu: ghc-utf8-string: Fix build with GHC 8. 
* gnu/packages/haskell.scm (ghc-utf8-string)[arguments]: Allow building with
newer "base".
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus 05c08ec9f6
gnu: ghc-fast-logger: Update to 2.4.11. 
* gnu/packages/haskell.scm (ghc-fast-logger): Update to 2.4.11.
[inputs]: Add ghc-easy-file and ghc-unix-time; remove ghc-bytestring-builder.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus 9656e6e862
gnu: ghc-css-text: Update to 0.1.3.0. 
* gnu/packages/haskell-web.scm (ghc-css-text): Update to 0.1.3.0.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus 0798fddfd0
gnu: ghc-nats: Update to 1.1.1. 
* gnu/packages/haskell.scm (ghc-nats): Update to 1.1.1.
 2018-02-13 13:37:35 +01:00
Ricardo Wurmus a6d1c4e75a
gnu: Add ghc-th-lift-instances. 
* gnu/packages/haskell.scm (ghc-th-lift-instances): New variable.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus 44c233ac13
gnu: ghc-th-lift: Update to 0.7.8. 
* gnu/packages/haskell.scm (ghc-th-lift): Update to 0.7.8.
[inputs]: Remove ghc-packedstring.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus b28f0ffab3
gnu: Add ghc-refact. 
* gnu/packages/haskell.scm (ghc-refact): New variable.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus 3657bd1faa
gnu: Add ghc-haskell-src-exts-util. 
* gnu/packages/haskell.scm (ghc-haskell-src-exts-util): New variable.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus 2025964bba
gnu: ghc-zip-archive: Update to 0.3.0.5. 
* gnu/packages/haskell.scm (ghc-zip-archive): Update to 0.3.0.5.
[inputs]: Add ghc-temporary.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus 7fb6eb174f
gnu: ghc-polyparse: Update to 1.12. 
* gnu/packages/haskell.scm (ghc-polyparse): Update to 1.12.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus 7d4de988a7
gnu: ghc-extra: Update to 1.6.3. 
* gnu/packages/haskell.scm (ghc-extra): Update to 1.6.3.
[inputs]: Add ghc-clock.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus c74dacd531
gnu: hlint: Update to 1.9.37. 
* gnu/packages/haskell.scm (hlint): Update to 1.9.37.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus 4d9754c221
gnu: ghc-haskell-src-exts: Update to 1.18.2. 
* gnu/packages/haskell.scm (ghc-haskell-src-exts): Update to 1.18.2.
[inputs]: Add ghc-pretty-show.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus 22b439dbb6
gnu: ghc-cgi: Update to 3001.3.0.2. 
* gnu/packages/haskell.scm (ghc-cgi): Update to 3001.3.0.2.
[arguments]: Allow building with newer QuickCheck.
[inputs]: Remove ghc-old-locale and ghc-old-time.
[native-inputs]: Add ghc-doctest and ghc-quickcheck.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus 29addb279a
gnu: ghc-network-uri: Update to 2.6.1.0. 
* gnu/packages/haskell.scm (ghc-network-uri): Update to 2.6.1.0.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus 2f430bf8ea
gnu: ghc-network: Update to 2.6.3.1. 
* gnu/packages/haskell.scm (ghc-network): Update to 2.6.3.1.
[inputs]: Remove.
[native-inputs]: Add ghc-hunit, ghc-doctest, ghc-test-framework, and
ghc-test-framework-hunit.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus e2d3e4d69c
gnu: ghc-exceptions: Allow newer version of QuickCheck. 
* gnu/packages/haskell.scm (ghc-exceptions)[arguments]: Allow running tests
with newer version of QuickCheck.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus 6418074ce9
gnu: ghc-cgi: Update to 3001.3.0.1. 
* gnu/packages/haskell.scm (ghc-cgi): Update to 3001.3.0.1.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus f30b753835
gnu: Add ghc-pretty-show. 
* gnu/packages/haskell.scm (ghc-pretty-show): New variable.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus b9a64a3671
gnu: Add ghc-haskell-lexer. 
* gnu/packages/haskell.scm (ghc-haskell-lexer): New variable.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus 567bf5b975
gnu: ghc-stm: Update to 2.4.5.0. 
* gnu/packages/haskell.scm (ghc-stm): Update to 2.4.5.0.
[description]: Improve.
 2018-02-13 13:37:34 +01:00
Ricardo Wurmus 613845d040
gnu: ghc-haddock: Update to 2.17.4. 
* gnu/packages/haskell.scm (ghc-haddock): Update to 2.17.4.
[native-inputs]: Add ghc-hspec and ghc-haddock-test.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus 35182fa2b4
gnu: Add ghc-haddock-test. 
* gnu/packages/haskell.scm (ghc-haddock-test): New variable.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus 354902e441
gnu: ghc-haddock-library: Update to 1.4.3. 
* gnu/packages/haskell.scm (ghc-haddock-library): Update to 1.4.3.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus a559c26cf4
gnu: ghc-haddock-api: Update to 2.17.3. 
* gnu/packages/haskell.scm (ghc-haddock-api): Update to 2.17.3.
[native-inputs]: Add ghc-quickcheck, ghc-hspec, and hspec-discover.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus 64a6954b7e
gnu: data-default-instances-base: Update to 0.1.0.1. 
* gnu/packages/haskell.scm (data-default-instances-base): Update to 0.1.0.1.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus f378ea16b3
gnu: ghc-data-default-class: Update to 0.1.2.0. 
* gnu/packages/haskell.scm (ghc-data-default-class): Update to 0.1.2.0.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus f9cb5105b7
gnu: ghc-data-default: Update to 0.7.1.1. 
* gnu/packages/haskell.scm (ghc-data-default): Update to 0.7.1.1.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus 29466a9b34
gnu: ghc-prelude-extras: Update to 0.4.0.3. 
* gnu/packages/haskell.scm (ghc-prelude-extras): Update to 0.4.0.3.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus 24857542bd
gnu: ghc-generic-deriving: Update to 1.11.1. 
* gnu/packages/haskell.scm (ghc-generic-deriving): Update to 1.11.1.
[native-inputs]: Add ghc-hspec and hspec-discover.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus 5e51bcf7b3
gnu: Add ghc-time-locale-compat. 
* gnu/packages/haskell.scm (ghc-time-locale-compat): New variable.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus 5e3840e250
gnu: ghc-text: Update to 1.2.2.2. 
* gnu/packages/haskell.scm (ghc-text): Update to 1.2.2.2.
[inputs]: Add ghc-random.

squash! gnu: ghc-text: Update to 1.2.3.0.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus c165ff9ce0
gnu: ghc-hashable: Update to 1.2.6.1. 
* gnu/packages/haskell.scm (ghc-hashable): Update to 1.2.6.1.
[arguments]: Enable tests.
[inputs]: Add ghc-random.
[native-inputs]: Add ghc-test-framework, ghc-test-framework-hunit,
ghc-test-framework-quickcheck2, ghc-hunit, and ghc-quickcheck.
[description]: Use Texinfo syntax for class name.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus 04a699919a
gnu: ghc-quickcheck-instances: Update to 0.3.16.1. 
* gnu/packages/haskell-check.scm (ghc-quickcheck-instances): Update to
0.3.16.1.
[inputs]: Add ghc-base-compat, ghc-tagged, ghc-transformers-compat,
ghc-uuid-types, and ghc-case-insensitive.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus b1c5c8de92
gnu: ghc-uuid-types: Fix tests with latest QuickCheck. 
* gnu/packages/haskell.scm (ghc-uuid-types)[arguments]: Relax version
constraint for QuickCheck.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus 037181ed23
gnu: ghc-old-time: Allow building with GHC 8. 
* gnu/packages/haskell.scm (ghc-old-time)[arguments]: Allow building with
newer version of "base".
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus 82674ed948
gnu: Add ghc-hashable-time. 
* gnu/packages/haskell.scm (ghc-hashable-time): New variable.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus 9dfc79b34c
gnu: Add ghc-th-abstraction. 
* gnu/packages/haskell.scm (ghc-th-abstraction): New variable.
 2018-02-13 13:37:33 +01:00
Ricardo Wurmus 1b1a1067d0
gnu: ghc-attoparsec: Update to 0.13.2.2. 
* gnu/packages/haskell.scm (ghc-attoparsec): Update to 0.13.2.2.
[arguments]: Disable tests.
[native-inputs]: Remove ghc-test-framework and ghc-test-framework-quickcheck2;
add ghc-tasty and ghc-tasty-quickcheck.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus a5044b6a0e
gnu: ghc-scientific: Update to 0.3.5.2. 
* gnu/packages/haskell.scm (ghc-scientific): Update to 0.3.5.2.
[inputs]: Add ghc-integer-logarithms and ghc-primitive; remove ghc-vector.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus d0f4853a9c
gnu: Add ghc-integer-logarithms. 
* gnu/packages/haskell.scm (ghc-integer-logarithms): New variable.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus 0f55dff335
gnu: ghc-hspec-meta: Update to 2.2.1. 
* gnu/packages/haskell-check.scm (ghc-hspec-meta): Update to 2.2.1.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus b80a6f30c8
gnu: ghc-hunit: Update to 1.3.1.2. 
* gnu/packages/haskell-check.scm (ghc-hunit): Update to 1.3.1.2.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus 245efb325b
gnu: ghc-hspec-core: Update to 2.2.4. 
* gnu/packages/haskell-check.scm (ghc-hspec-core): Update to 2.2.4.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus ed03ac41cf
gnu: ghc-hspec: Update to 2.2.4. 
* gnu/packages/haskell-check.scm (ghc-hspec): Update to 2.2.4.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus 669692eb55
gnu: ghc-tasty: Update to 0.11.0.4. 
* gnu/packages/haskell-check.scm (ghc-tasty): Update to 0.11.0.4.
[inputs]: Add ghc-regex-tdfa.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus e5199a2cda
gnu: ghc-test-framework-quickcheck2: Update to 0.3.0.4. 
* gnu/packages/haskell-check.scm (ghc-test-framework-quickcheck2): Update to
0.3.0.4.
[source]: Remove snippet.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus 86ad4ee373
gnu: hspec-discover: Update to 2.2.4. 
* gnu/packages/haskell-check.scm (hspec-discover): Update to 2.2.4.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus 7fa02bc7ab
gnu: ghc-test-framework: Fix build with GHC 8. 
* gnu/packages/haskell-check.scm (ghc-test-framework)[arguments]: Permit
building with newer version of "time".
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus 4c8a1f4030
gnu: ghc-vector: Update to 0.12.0.1. 
* gnu/packages/haskell.scm (ghc-vector): Update to 0.12.0.1.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus 40a6d7a2f6
gnu: ghc-dlist: Update to 0.8.0.4. 
* gnu/packages/haskell.scm (ghc-dlist): Update to 0.8.0.4.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus c088e39341
gnu: ghc-mtl: Fix build with GHC 8. 
* gnu/packages/haskell.scm (ghc-mtl)[inputs]: Add ghc-transformers.
[arguments]: Permit building with newer version of transformers.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus d5e86172ca
gnu: Add ghc-quickcheck-latest. 
* gnu/packages/haskell-check.scm (ghc-quickcheck-latest): New variable.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus 7291ad1e12
gnu: ghc-quickcheck: Update to 2.10.1. 
* gnu/packages/haskell-check.scm (ghc-quickcheck): Update to 2.10.1.
[inputs]: Add ghc-random.
[description]: Add two sentences.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus 49e5432b8c
gnu: ghc-primitive: Update to 0.6.3.0. 
* gnu/packages/haskell.scm (ghc-primitive): Update to 0.6.3.0.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus afff0b6d42
gnu: ghc-old-locale: Allow building with newer base package. 
* gnu/packages/haskell.scm (ghc-old-locale)[arguments]: Add configure flag to
allow newer "base" version.
 2018-02-13 13:37:32 +01:00
Ricardo Wurmus e2dc97d69a
gnu: ghc: Use ghc-8 as default GHC. 
* gnu/packages/haskell.scm (ghc): Rename variable...
(ghc-7): ...to this.
(ghc-8)[native-inputs]: Adjust accordingly.
(ghc): New alias for ghc-8.
 2018-02-13 13:37:31 +01:00
Ricardo Wurmus b90f72dcf8
gnu: ghc-streaming-commons: Fix license and description. 
* gnu/packages/haskell.scm (ghc-streaming-commons)[license]: The correct
license is Expat.
[description]: Use a complete sentence.
 2018-02-13 13:37:31 +01:00
Rutger Helling 6963305ce5
gnu: local.mk: Remove mpv patch lines. 
* gnu/local.mk: Remove mpv CVE-2018-6360 patch lines.
 2018-02-13 10:35:00 +01:00
Rutger Helling ebcab70ac5
gnu: fuse-exfat: Update to 1.2.8. 
* gnu/packages/linux.scm (fuse-exfat): Update to 1.2.8.
 2018-02-13 10:26:41 +01:00
Rutger Helling 8bbd4b0141
gnu: Update copyright line. 
* gnu/packages/video.scm: Update copyright line for commit 171c764.
 2018-02-13 10:21:15 +01:00
Rutger Helling 171c7642b8
gnu: mpv: Update to 0.28.1 [fixes CVE-2018-6360]. 
* gnu/packages/video.scm (mpv): Update to 0.28.1.
 2018-02-13 10:13:40 +01:00
Eric Bavier 4747cca2b4
gnu: ccache: Update to 3.4. 
* gnu/packages/ccache.scm (ccache): Update to 3.4.
 2018-02-12 22:27:46 -06:00
Leo Famulari 95a396f4e1
gnu: go: Update to 1.9.4 [fixes CVE-2018-6574]. 
* gnu/packages/golang.scm (go-1.9): Update to 1.9.4.
 2018-02-12 15:31:16 -05:00
Hartmut Goebel 0093e26f91
gnu: Add kirigami. 2018-02-12 16:25:35 +01:00
Ricardo Wurmus 7f1d9bef50
gnu: Add r-scran. 
* gnu/packages/bioinformatics.scm (r-scran): New variable.
 2018-02-12 15:29:44 +01:00
Ricardo Wurmus 658ab21d2e
gnu: Add r-scater. 
* gnu/packages/bioinformatics.scm (r-scater): New variable.

Co-authored-by: Raoul Jean Pierre Bonnal <ilpuccio.febo@gmail.com>
 2018-02-12 15:29:43 +01:00
Ricardo Wurmus 6fb1dc17a3
gnu: Add r-singlecellexperiment. 
* gnu/packages/bioinformatics.scm (r-singlecellexperiment): New variable.
 2018-02-12 15:29:43 +01:00
Ricardo Wurmus 9ec0898824
gnu: Add r-beachmat. 
* gnu/packages/bioinformatics.scm (r-beachmat): New variable.
 2018-02-12 15:29:43 +01:00
Ricardo Wurmus 748e9f163a
gnu: Add r-rhdf5lib. 
* gnu/packages/bioinformatics.scm (r-rhdf5lib): New variable.
 2018-02-12 15:29:43 +01:00
Ricardo Wurmus d2c0f03037
gnu: Add r-shinydashboard. 
* gnu/packages/web.scm (r-shinydashboard): New variable.

Co-authored-by: Raoul Jean Pierre Bonnal <ilpuccio.febo@gmail.com>
 2018-02-12 15:29:43 +01:00
Ricardo Wurmus 4dba441c2a
gnu: hdf5: Build with -fPIC. 
* gnu/packages/maths.scm (hdf5)[arguments]: Add -fPIC to CFLAGS and CXXFLAGS.
 2018-02-12 15:29:43 +01:00
Arun Isaac ecae16bec5
gnu: emacs-emms-player-mpv: Update to 0.0.13. 
* gnu/packages/emacs.scm (emacs-emms-player-mpv): Update to 0.0.13.
 2018-02-12 18:49:54 +05:30
Efraim Flashner eb6b471b44
gnu: emacs-ob-ipython: Declare a source file-name. 
* gnu/packages/emacs.scm (emacs-ob-ipython)[source]: Add 'file-name field.
 2018-02-12 11:46:43 +02:00
Efraim Flashner b87047e04b
gnu: emacs-d-mode: Declare a source file-name. 
* gnu/packages/emacs.scm (emacs-d-mode)[source]: Add 'file-name field.
 2018-02-12 11:46:43 +02:00
Efraim Flashner 995b706931
gnu: guile-emacs: Declare a source file-name. 
* gnu/packages/emacs.scm (guile-emacs)[source]: Add 'file-name field.
 2018-02-12 11:46:39 +02:00
Efraim Flashner 23101355fd
gnu: vifm: Update to 0.9.1. 
* gnu/packages/vim.scm (vifm): Update to 0.9.1.
 2018-02-11 20:04:44 +02:00
Marius Bakke b4c9a3173d
gnu: libreoffice: Update to 5.4.5.1 [CVE-2018-6871]. 
* gnu/packages/check.scm (cppunit-1.14): New public variable.
* gnu/packages/libreoffice.scm (xmlsec-src-libreoffice): Remove variable.
(libreoffice): Update to 5.4.5.1.
[native-inputs]: Change CPPUNIT to CPPUNIT-1.14.  Remove AUTOCONF and AUTOMAKE.
[inputs]: Add GPGME, XMLSEC-NSS and LIBLTDL.  Remove XMLSEC-SRC-LIBREOFFICE.
Replace LIBJPEG with LIBJPEG-TURBO.
[arguments]: Remove xmlsec code from PREPARE-SRC-PHASE.  Make sure GPGME++
headers are found.  Add workaround for <https://bugs.gentoo.org/641812>.  Add
"--disable-pdfium" to #:configure-flags.
* gnu/packages/xml.scm (xmlsec-nss): New public variable.
 2018-02-11 16:29:49 +01:00
Marius Bakke f1d7e14a1b
gnu: libmd: Update to 1.0.0. 
* gnu/packages/crypto.scm (libmd): Update to 1.0.0.
[source](uri): Add freedesktop.org mirror.
 2018-02-11 16:29:04 +01:00
Kei Kebreau f62dcba42d
gnu: gmtp: Update to 1.3.11. 
* gnu/packages/libusb.scm (gmtp): Update to 1.3.11.
 2018-02-11 10:20:41 -05:00
Leo Famulari 2ab575298e
gnu: w3m: Update to 0.5.3+git20180125 [fixes CVE-2018-{6196,6197,6198}]. 
* gnu/packages/w3m.scm (w3m): Update to 0.5.3+git20180125.
 2018-02-11 09:59:41 -05:00
ng0 e720329d5f
gnu: python-pycanberra: Use new URLs. 
* gnu/packages/libcanberra.scm (python-pycanberra)[source]: Use new URL.
[home-page]: Update URL.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-02-11 09:44:11 -05:00
Ricardo Wurmus 8226304b17
gnu: propeller-gcc: Fix build. 
* gnu/packages/embedded.scm (propeller-gcc)[native-inputs]: Use GCC 4.9.
 2018-02-11 11:42:09 +01:00
Ricardo Wurmus aba3e482b9
gnu: Add r-hdf5array. 
* gnu/packages/bioinformatics.scm (r-hdf5array): New variable.
 2018-02-11 11:42:09 +01:00
Mark H Weaver a7fb298665
Merge branch 'master' into core-updates 2018-02-11 04:05:07 -05:00
Leo Famulari 31c7002b46
gnu: libtasn1: Fix CVE-2018-6003. 
* gnu/packages/patches/libtasn1-CVE-2018-6003.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (libtasn1/fixed)[source]: Use it.
 2018-02-10 23:01:56 -05:00
Leo Famulari 79cf105304
gnu: libtiff: Fix CVE-2017-{9935,11335,18013}. 
* gnu/packages/patches/libtiff-CVE-2017-9935.patch,
gnu/packages/patches/libtiff-CVE-2017-11335.patch,
gnu/packages/patches/libtiff-CVE-2017-18013.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff)[replacement]: New field.
(libtiff/fixed): New variable.
 2018-02-10 22:58:19 -05:00
Tobias Geerinckx-Rice 6a517548e6
gnu: loksh: Update to 6.2. 
* gnu/packages/shells.scm (loksh): Update to 6.2.
 2018-02-11 03:06:57 +01:00
Tobias Geerinckx-Rice 0de57b446c
gnu: global: Update to 6.6.2. 
* gnu/packages/code.scm (global): Update to 6.6.2.
 2018-02-11 01:35:47 +01:00
Tobias Geerinckx-Rice 6577611b2b
gnu: acpica: Update to 20180209. 
* gnu/packages/admin.scm (acpica): Update to 20180209.
 2018-02-11 01:22:32 +01:00
Tobias Geerinckx-Rice 8067e7bf2b
gnu: youtube-dl: Update to 2018.02.08. 
* gnu/packages/video.scm (youtube-dl): Update to 2018.02.08.
 2018-02-11 00:16:19 +01:00
Ricardo Wurmus 6730d895d3
gnu: knights: Fix build. 
* gnu/packages/games.scm (knights)[native-inputs]: Add pkg-config.
 2018-02-10 23:53:34 +01:00
Tobias Geerinckx-Rice 9da87e4cc6
gnu: perl-net-dns: Update to 1.15. 
* gnu/packages/networking.scm (perl-net-dns): Update to 1.15.
 2018-02-10 23:39:37 +01:00
Tobias Geerinckx-Rice e98d1d2a64
gnu: exfat-utils: Update to 1.2.8. 
* gnu/packages/mtools.scm (exfat-utils): Update to 1.2.8.
 2018-02-10 23:03:51 +01:00
Tobias Geerinckx-Rice ed3094cee9
gnu: unibilium: Update to 1.2.1. 
* gnu/packages/terminals.scm (unibilium): Update to 1.2.1.
 2018-02-10 23:03:50 +01:00
Leo Famulari 354c493fb8
gnu: exim: Update to 4.90.1 [fixes CVE-2018-6789]. 
* gnu/packages/mail.scm (exim): Update to 4.90.1.
[source]: Use HTTPS URLs.
 2018-02-10 13:47:58 -05:00
Julien Lepiller 73a1f10a80
gnu: Add java-xmlunit-legacy. 
* gnu/packages/java.scm (java-xmlunit-legacy): New variable.
 2018-02-10 19:04:44 +01:00
Julien Lepiller 7ac4f054e7
gnu: Add java-xmlunit. 
* gnu/packages/java.scm (java-xmlunit): New variable.
 2018-02-10 19:04:38 +01:00
Julien Lepiller e06bf42811
gnu: Add java-jline. 
* gnu/packages/java.scm (java-jline): New variable.
 2018-02-10 19:04:36 +01:00
Julien Lepiller 5ee7b02f56
gnu: Add java-xstream. 
* gnu/packages/xml.scm (java-xstream): New variable.
 2018-02-10 19:04:32 +01:00
Julien Lepiller a5ec8a5c6b
gnu: Add java-jdom2. 
* gnu/packages/xml.scm (java-jdom2): New variable.
 2018-02-10 19:04:29 +01:00
Julien Lepiller b8798817a1
gnu: Add java-jettison. 
* gnu/packages/xml.scm (java-jettison): New variable.
 2018-02-10 19:04:27 +01:00
Julien Lepiller 4c7759f027
gnu: Add java-stax. 
* gnu/packages/xml.scm (java-stax): New variable.
 2018-02-10 19:04:25 +01:00
Julien Lepiller 3058d8ec56
gnu: Add java-kxml2. 
* gnu/packages/xml.scm (java-kxml2): New variable.
 2018-02-10 19:04:23 +01:00
Julien Lepiller be0524f472
gnu: Add java-jaxen. 
* gnu/packages/xml.scm (java-jaxen): New variable.
 2018-02-10 19:04:21 +01:00
Julien Lepiller 605c23df5b
gnu: Add java-dom4j. 
gnu/packages/xml.scm (java-dom4j): New variable.
 2018-02-10 19:04:19 +01:00
Julien Lepiller 9421f68224
gnu: Add java-xmlpull2. 
* gnu/packages/xml.scm (java-xmlpull2): New variable.
 2018-02-10 19:04:16 +01:00
Julien Lepiller 82d7d4e1c8
gnu: Add java-xpp3. 
gnu/packages/xml.scm (java-xpp3): New variable.
 2018-02-10 19:04:14 +01:00
Julien Lepiller 96f31935ec
gnu: Add java-xsdlib. 
* gnu/packages/xml.scm (java-xsdlib): New variable.
 2018-02-10 19:04:12 +01:00
Julien Lepiller 5552080de3
gnu: Add java-xom. 
* gnu/packages/xml.scm (java-xom): New variable.
 2018-02-10 19:04:10 +01:00
Julien Lepiller 7eae94d86a
gnu: Add java-jaxen-bootstrap. 
* gnu/packages/xml.scm (java-jaxen-bootstrap): New variable.
 2018-02-10 19:04:08 +01:00
Julien Lepiller 6d0368eb84
gnu: Add java-xerces. 
* gnu/packages/java.scm (java-xerces): New variable.
* gnu/packages/patches/java-xerces-bootclasspath.patch: New file.
* gnu/packages/patches/java-xerces-build_dont_unzip.patch: New file.
* gnu/packages/patches/java-xerces-xjavac_taskdef.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
 2018-02-10 19:04:04 +01:00
Julien Lepiller 9a86ee788d
gnu: Add java-apache-xml-commons-resolver. 
* gnu/packages/xml.scm (java-apache-xml-commons-resolver): New variable.
 2018-02-10 19:04:02 +01:00
Julien Lepiller 1a17ca2624
gnu: Add java-jaxp. 
* gnu/packages/xml.scm (java-jaxp): New variable.
 2018-02-10 19:04:00 +01:00
Julien Lepiller 0158ea8a82
gnu: Add java-joda-time. 
* gnu/packages/java.scm (java-joda-time): New variable.
 2018-02-10 19:03:54 +01:00
Julien Lepiller d57fd728d7
gnu: Add java-joda-convert. 
* gnu/packages/java.scm (java-joda-convert): New variable.
 2018-02-10 19:03:52 +01:00
Julien Lepiller a10a451c20
gnu: Add java-cdi-api. 
* gnu/packages/java.scm (java-cdi-api): New variable.
 2018-02-10 19:03:50 +01:00
Julien Lepiller cc03a786ee
gnu: Add java-jboss-interceptors-api-spec. 
* gnu/packages/java.scm (java-jboss-interceptors-api-spec): New
variable.
 2018-02-10 19:03:48 +01:00
Julien Lepiller cc06132957
gnu: Add java-jboss-el-api-spec. 
* gnu/packages/java.scm (java-jboss-el-api-spec): New variable.
 2018-02-10 19:03:46 +01:00
Julien Lepiller a87ea1adcb
gnu: Add java-jansi. 
* gnu/packages/java.scm (java-jansi): New variable.
 2018-02-10 19:03:44 +01:00
Julien Lepiller d0c62afa8c
gnu: Add java-jansi-native. 
* gnu/packages/java.scm (java-jansi-native): New variable.
 2018-02-10 19:03:41 +01:00
Julien Lepiller 335aa20b96
gnu: Add java-hawtjni. 
* gnu/packages/java.scm (java-hawtjni): New variable.
 2018-02-10 19:03:38 +01:00
Julien Lepiller 8d510f65ec
gnu: Add java-geronimo-xbean-finder. 
* gnu/packages/java.scm (java-geronimo-xbean-finder): New variable.
 2018-02-10 19:03:36 +01:00
Julien Lepiller 0cb9ce32c7
gnu: Add java-geronimo-xbean-asm-util. 
* gnu/packages/java.scm (java-geronimo-xbean-asm-util): New variable.
 2018-02-10 19:03:33 +01:00
Julien Lepiller 3fda539bb4
gnu: Add java-geronimo-xbean-bundleutils. 
* gnu/packages/java.scm (java-geronimo-xbean-bundleutils): New variable.
 2018-02-10 19:03:30 +01:00
Julien Lepiller c2b3857ebe
gnu: Add java-jsoup. 
* gnu/packages/web.scm (java-jsoup): New variable.
 2018-02-10 19:03:27 +01:00
Julien Lepiller 09c44196e1
gnu: Add java-gson. 
* gnu/packages/java.scm (java-gson): New variable.
 2018-02-10 19:03:15 +01:00
Nicolas Goaziou 04162e83ff
gnu: qtsensors: Fix build. 
* gnu/packages/qt.scm (qtsensors)[arguments]: Remove failing test.
 2018-02-10 18:54:01 +01:00
Nicolas Goaziou 6db6c3a98f
gnu: tlp: Fix build. 
* gnu/packages/linux.scm (tlp): Add "TLP_META" environment variable.  Use
  "invoke".
 2018-02-10 12:47:59 +01:00
Ricardo Wurmus 3a52bb7194
gnu: sbcl: Update to 1.4.4. 
* gnu/packages/lisp.scm (sbcl): Update to 1.4.4.
 2018-02-10 12:15:07 +01:00
Nicolas Goaziou 59d999f9f6
gnu: tlp: Update to 1.1. 
* gnu/packages/linux.scm (tlp): Update to 1.1.
 2018-02-10 10:36:03 +01:00
Oleg Pykhalov 28e3569f1f
gnu: qemu: Add pulseaudio support. 
* gnu/packages/virtualization.scm (qemu)[arguments]: Add --audio-drv-list
flag.
[inputs]: Add pulseaudio.
(qemu-minimal)[inputs]: Remove pulseaudio.
 2018-02-10 00:37:44 +03:00
Oleg Pykhalov dc993847f1
gnu: Add colormake. 
* gnu/packages/colorize.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add this.
 2018-02-09 23:44:52 +03:00
Christopher Baines abd78128ce
gnu: Switch ruby-pg to build with postgresql-9.6. 
As the testsuite fails with the later version.

* gnu/packages/ruby.scm (ruby-pg)[inputs]: Switch postgresql to
  postgresql-9.6.
 2018-02-09 20:42:02 +00:00
Oleg Pykhalov 61995dce50
gnu: emacs-browse-at-remote: Patch for GNU Cgit support. 
* gnu/packages/patches/emacs-browse-at-remote-cgit-gnu.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/emacs.scm (emacs-browse-at-remote)[source](patches): Use it.
 2018-02-09 22:15:21 +03:00
Pierre Langlois af414f34fb
gnu: clementine: Remove Spotify downloader. 
Clementine has a button in the preference menu that allows downloading a
binary blob to add support for Spofify.  Let's remove this button.  It turns
out this is the only part of the code base that uses crypto++, let's remove
this dependency too.

* gnu/packages/music.scm (clementine)[arguments]: Remove crypto++ support. Set
HAVE_SPOTIFY_DOWNLOADER to FALSE.
[inputs]: Remove crypto++ input.
* gnu/packages/patches/clementine-remove-crypto++-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-02-09 13:32:08 -05:00
Danny Milosavljevic a48b877e60
gnu: appstream-glib: Propagate some inputs. 
* gnu/packages/glib.scm (appstream-glib)[inputs]: Move gcab, gdk-pixbuf,
util-linux to propagated-inputs.
 2018-02-09 17:06:24 +01:00
Marius Bakke cfd7723cf4
gnu: samba: Update to 4.7.5. 
* gnu/packages/samba.scm (samba): Update to 4.7.5.
 2018-02-09 16:43:49 +01:00
Marius Bakke 165c8b2adc
gnu: zziplib: Update to 0.13.68. 
* gnu/packages/patches/zziplib-CVE-2017-5974.patch,
gnu/packages/patches/zziplib-CVE-2017-5975.patch,
gnu/packages/patches/zziplib-CVE-2017-5976.patch,
gnu/packages/patches/zziplib-CVE-2017-5978.patch,
gnu/packages/patches/zziplib-CVE-2017-5979.patch,
gnu/packages/patches/zziplib-CVE-2017-5981.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/compression.scm (zziplib): Update to 0.13.68.
[source](patches): Remove.
[arguments]: Remove #:parallel-tests?.  Set #:tests? #f.
 2018-02-09 16:43:49 +01:00
Ludovic Courtès a68fdfea96
services: avahi: Default to nss-mdns 0.10. 
This works around <https://bugs.gnu.org/30396>.
Reported by George myglc2 Clemmer <myglc2@gmail.com>.

* gnu/packages/avahi.scm (nss-mdns-0.10): New variable.
* gnu/services/avahi.scm (avahi-service-type): Use it.
 2018-02-09 15:17:41 +01:00
Marius Bakke ce2cfcabfc
gnu: python-pandas: Update to 0.22.0. 
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/patches/python-pandas-skip-failing-tests.patch: Delete file.
* gnu/packages/python.scm (python-pandas): Update to 0.22.0.
[source](patches): Remove.
[native-inputs]: Add PYTHON-PYTEST and PYTHON-LXML.
[arguments]: Replace CHECK-PHASE with custom pytest invocation.
[home-page]: Use HTTPS.
 2018-02-09 14:44:49 +01:00
Marius Bakke ba62f087bc
gnu: python-scipy: Update to 1.0.0. 
* gnu/packages/python.scm (python-scipy): Update to 1.0.0.
[arguments]: Remove obsolete FIX-TESTS-PHASE.  Override sphinxbuild in
INSTALL-DOC-PHASE.  Fix PYVER argument.  Use INVOKE instead of SYSTEM*.
[native-inputs]: Remove PYTHON-NOSE.  Add PYTHON-PYTEST and WHICH.
 2018-02-09 14:44:49 +01:00
Marius Bakke 2c7f4ae561
gnu: python-numpy: Update to 1.14.0. 
* gnu/packages/python.scm (python-numpy): Update to 1.4.0.
[source](uri): Use release tarball.
[source](file-name): Remove.
 2018-02-09 14:44:49 +01:00
Danny Milosavljevic 8f8842cc7b
gnu: guile-sqlite3: Update to 0.0-3.1cd1dec. 
* gnu/packages/guile.scm (guile-sqlite3): Update to 0.0-3.1cd1dec.
 2018-02-09 12:25:49 +01:00
Ludovic Courtès be5e2cf1a6
gnu: guix: Update snapshot to bc880f9. 
* gnu/packages/package-management.scm (guix): Update to bc880f9.
 2018-02-09 11:45:44 +01:00
Ludovic Courtès bc880f9d66
gnu: mcron2: Install files to 'share/guile/site/2.2'. 
Reported by Maxim Cournoyer <maxim.cournoyer@gmail.com>.

* gnu/packages/guile.scm (mcron2)[arguments]: In 'use-guile-2.2' phase,
substitute /share/guile/site/2.0.
 2018-02-09 11:23:27 +01:00
Arun Isaac a76acfd3f5
gnu: services: Add wesnothd service. 
* gnu/services/games.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Game Services): Document the service.
 2018-02-09 14:55:17 +05:30
Arun Isaac 75abd864fc
gnu: Add wesnoth-server. 
* gnu/packages/games.scm (wesnoth-server): New variable.
 2018-02-09 14:55:09 +05:30
Mark H Weaver 110afddee8
gnu: icecat: Use system harfbuzz and graphite2 libraries. 
* gnu/packages/patches/icecat-use-system-harfbuzz.patch,
gnu/packages/patches/icecat-use-system-graphite2.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.  Delete
"gfx/harfbuzz" and "gfx/graphite2" in the snippet.
[inputs]: Add harfbuzz and graphite2.
[arguments]: Add "--with-system-harfbuzz" and "--with-system-graphite2" to
configure-flags.
 2018-02-09 01:53:07 -05:00
Mark H Weaver efe2a2833c
Merge branch 'master' into core-updates 2018-02-09 01:46:34 -05:00
Oleg Pykhalov 8d0edc8246
gnu: Add sipcalc. 
* gnu/packages/admin.scm (sipcalc): New public variable.
 2018-02-09 08:44:57 +03:00
Leo Famulari 63298f14c9
gnu: mu: Use a fixed variant of tzdata for the mu tests. 
* gnu/packages/mail.scm (mu)[inputs]: Remove tzdata.
[native-inputs]: Add tzdata-2017a.
 2018-02-08 23:18:08 -05:00
Pierre Langlois e5fdc3348a
gnu: mu: Update to 1.0. 
* gnu/packages/mail.scm (mu): Update to 1.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-02-08 23:18:04 -05:00
Kei Kebreau 3a9e65538a
gnu: audacity: Update to 2.2.1. 
* gnu/packages/audio.scm (audacity): Update to 2.2.1.
 2018-02-08 19:25:55 -05:00
Leo Famulari 2c433a1612
gnu: postgresql: Update to 10.2 [CVE-2018-{1052,1053}]. 
* gnu/packages/databases.scm (postgresql): Update to 10.2.
 2018-02-08 17:47:52 -05:00
Mark H Weaver bf4075cd9c
gnu: linux-libre: Update to 4.15.2. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.15.2.
(%linux-libre-hash): Update hash.
 2018-02-08 17:38:15 -05:00
Mark H Weaver f0c8b50f0a
gnu: linux-libre@4.14: Update to 4.14.18. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.18.
(%linux-libre-4.14-hash): Update hash.
 2018-02-08 17:37:10 -05:00
Alex Vong e61da2e884
gnu: mpv: Fix CVE-2018-6360. 
* gnu/packages/patches/mpv-CVE-2018-6360-1.patch,
gnu/packages/patches/mpv-CVE-2018-6360-2.patch,
gnu/packages/patches/mpv-CVE-2018-6360-3.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/video.scm (mpv)[source]: Use them.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2018-02-08 15:18:21 -05:00
Leo Famulari 30335a2963
gnu: Update syncthing to 0.14.44. 
* gnu/packages/syncthing.scm (syncthing): Update to 0.14.44.
[inputs]: Add go-github-com-prometheus-union and remove
go-github-com-edsrzf-mmap-go.
[source]: Delete bundled dependencies in a snippet.
[arguments]: Remove the 'delete-bundled-source-code' phase.
 2018-02-08 15:18:21 -05:00
Leo Famulari 5c8c1511e8
gnu: go-github-com-zillode-notify: Update to 0.0.0-2.a8abcfb. 
* gnu/packages/syncthing.scm (go-github-com-zillode-notify): Update to
0.0.0-2.a8abcfb.
 2018-02-08 15:18:21 -05:00
Leo Famulari f07ccbc256
gnu: Add go-github-com-prometheus-union. 
* gnu/packages/syncthing.scm (go-github-com-prometheus-union): New
variable.
 2018-02-08 15:18:21 -05:00
Leo Famulari fa22168b5c
gnu: Add go-github-com-client-golang-prometheus. 
* gnu/packages/syncthing.scm (go-github-com-client-golang-prometheus):
New variable.
 2018-02-08 15:18:21 -05:00
Leo Famulari bfbe868d8e
gnu: Add go-github-com-client-golang-prometheus-promhttp. 
* gnu/packages/syncthing.scm
(go-github-com-client-golang-prometheus-promhttp): New variable.
 2018-02-08 15:18:20 -05:00
Leo Famulari 13dca4a56e
gnu: Add go-github-com-prometheus-procfs. 
* gnu/packages/syncthing.scm (go-github-com-prometheus-procfs): New variable.
 2018-02-08 15:18:20 -05:00
Leo Famulari 270590bd69
gnu: Add go-github-com-prometheus-common-expfmt. 
* gnu/packages/syncthing.scm (go-github-com-prometheus-common-expfmt):
New variable.
 2018-02-08 15:18:20 -05:00
Leo Famulari 1da227b0d8
gnu: Add go-github-com-matttproud-golang-protobuf-extensions-pbutil. 
* gnu/packages/syncthing.scm
(go-github-com-matttproud-golang-protobuf-extensions-pbutil): New
variable.
 2018-02-08 15:18:20 -05:00
Leo Famulari 4b6b1a3856
gnu: Add go-github-com-prometheus-client-model-go. 
* gnu/packages/syncthing.scm (go-github-com-prometheus-client-model-go):
New variable.
 2018-02-08 15:18:20 -05:00
Leo Famulari 339e44dac2
gnu Add go-github-com-golang-protobuf-proto. 
* gnu/packages/syncthing.scm (go-github-com-golang-protobuf-proto): New
variable.
 2018-02-08 15:18:19 -05:00
Leo Famulari d095620a59
gnu: go-github-com-gogo-protobuf: Update to 0.5-2.160de10. 
* gnu/packages/syncthing.scm (go-github-com-gogo-protobuf): Update to
0.5-2.160de10.
 2018-02-08 15:18:19 -05:00
Leo Famulari a04434f291
gnu: Add go-github-com-beorn7-perks-quantile. 
* gnu/packages/syncthing.scm (go-github-com-beorn7-perks-quantile): New
variable.
 2018-02-08 15:18:16 -05:00
Leo Famulari 6666f4f41f
gnu: vdirsyncer: Update to 0.16.4. 
* gnu/packages/dav.scm (vdirsyncer): Update to 0.16.4.
 2018-02-08 13:37:36 -05:00
Tobias Geerinckx-Rice f81b6e7703
gnu: libtirpc: Update to 1.0.2. 
* gnu/packages/onc-rpc.scm (libtirpc): Update to 1.0.2.
[patches]: Remove patch for fixed CVE.
* gnu/packages/patches/libtirpc-CVE-2017-8779.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2018-02-08 18:21:08 +01:00
Tobias Geerinckx-Rice cf08cc16e6
gnu: serd: Update to 0.28.0. 
* gnu/packages/rdf.scm (serd): Update to 0.28.0.
 2018-02-08 17:53:59 +01:00
Tobias Geerinckx-Rice ed5f55de7d
gnu: nim: Use INVOKE. 
* gnu/packages/nim.scm (nim)[arguments]: Substitute INVOKE for SYSTEM*.
 2018-02-08 17:53:23 +01:00
Tobias Geerinckx-Rice dd935df2c1
gnu: libcap-ng: Remove unused python input. 
Outputs so identical you wish they were intensional.

* gnu/packages/admin.scm (libcap-ng)[inputs]: Remove python.
[arguments]: Add ‘--without-python’ to #:configure-flags to suppress a
bogus error.
 2018-02-08 17:53:23 +01:00
Kei Kebreau 5a2c4b3bbc
gnu: pwgen: Update to 2.08. 
* gnu/packages/password-utils.scm (pwgen): Update to 2.08.
 2018-02-08 11:11:09 -05:00
Tobias Geerinckx-Rice ed0c5d3c58
gnu: mcrl2: Fix typo in synopsis. 
* gnu/packages/maths.scm (mcrl2)[synopsis]: Fix typo.
[description]: Use @dfn.
 2018-02-08 14:42:32 +01:00
Tobias Geerinckx-Rice cc304fe821
gnu: libcap-ng: Update to 0.7.9. 
gnu/packages/admin.scm (libcap-ng): Update to 0.7.9.
 2018-02-08 14:24:23 +01:00
Tobias Geerinckx-Rice bf30b70b26
gnu: conky: Update to 1.10.8. 
* gnu/packages/conky.scm (conky): Update to 1.10.8.
 2018-02-08 14:24:23 +01:00
Jan Nieuwenhuizen 5b05dce747
gnu: Add mcrl2. 
* gnu/packages/maths.scm (mcrl2): New variable.
 2018-02-08 08:50:06 +01:00
Tobias Geerinckx-Rice 83e8a302f2
gnu: lunzip: Update to 1.10. 
* gnu/packages/compression.scm (lunzip): Update to 1.10.
 2018-02-08 05:06:54 +01:00
Tobias Geerinckx-Rice c28377802e
gnu: nim: Update to 0.17.2. 
* gnu/packages/nim.scm (nim): Update to 0.17.2.
 2018-02-08 05:01:42 +01:00
Tobias Geerinckx-Rice 0386cdd373
gnu: luajit, lua5.x-bitop: Use HTTPS home pages. 
* gnu/packages/lua.scm (luajit, make-lua-bitop)[home-page]: Use HTTPS.
 2018-02-08 05:01:42 +01:00
Tobias Geerinckx-Rice a093bb6967
gnu: luajit: Make available as ‘luajit’. 
* gnu/packages/lua.scm (luajit)[arguments]: Add a ‘create-luajit-symlink’
phase to make the interpreter available simply as ‘luajit’.
 2018-02-08 05:01:42 +01:00
Tobias Geerinckx-Rice 906f1b48e2
gnu: luajit: Update to 2.1.0-beta3. 
* gnu/packages/lua.scm (luajit): Update to 2.1.0-beta3.
[source]: Remove symlinks patch.
* gnu/packages/patches/luajit-symlinks.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2018-02-08 05:01:42 +01:00
Tobias Geerinckx-Rice b2d00af723
gnu: mc: Substitute more FHS file names. 
* gnu/packages/mc.scm (mc)[arguments]: Add some more files to the
‘patch-FHS-file-names’ phase.
 2018-02-08 05:01:41 +01:00
Leo Famulari 0b18c0b0de
gnu: mupdf: Fix CVE-2017-17858. 
* gnu/packages/patches/mupdf-CVE-2017-17858.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (mupdf)[source]: Use it.
 2018-02-07 21:17:57 -05:00
Marius Bakke 53f826cd0f
gnu: python2-tqdm: Work around missing flake8 propagation. 
* gnu/packages/python.scm (python-tqdm)[properties]: Declare python2 variant.
(python2-tqdm): Use STRIP-PYTHON2-VARIANT.
[native-inputs]: Add PYTHON-ENUM34.
 2018-02-07 17:05:23 +01:00
Marius Bakke b7049b2e23
Revert "gnu: python2-flake8: Fix python-enum34 propagation." 
This triggers a rebuild of 1111 packages, so let's work around it on the few
that are affected instead.

This reverts commit 01af1e11a6.
 2018-02-07 17:00:45 +01:00
Marius Bakke 0a2d977ac1
gnu: python-mando: Remove version 0.3.1. 
* gnu/packages/python.scm (python-mando-0.3.1): Remove variable.
 2018-02-07 15:34:09 +01:00
Marius Bakke 5861f9c9d6
gnu: python-radon: Update to 2.2.0. 
* gnu/packages/python.scm (python-radon): Update to 2.2.0.
[arguments]: Replace CHECK-PHASE with custom test command.
[propagated-inputs]: Replace PYTHON-MANDO-0.3.1 with PYTHON-MANDO.
[native-inputs]: Remove PYTHON-FLAKE8, PYTHON-TOX and PYTHON-PARAMUNITTEST.
Add PYTHON-PYTEST-MOCK.
 2018-02-07 15:34:09 +01:00
Marius Bakke f7bd4f2372
gnu: python-pytest-mock: Update to 1.6.3. 
* gnu/packages/check.scm (python-pytest-mock): Update to 1.6.3.
[source]: Use tarball relase.
[native-inputs]: Remove UNZIP.  Add PYTHON-SETUPTOOLS-SCM.
 2018-02-07 15:34:09 +01:00
Marius Bakke 50c84dd5a6
gnu: python-mando: Fix indentation. 
* gnu/packages/python.scm (python-mando): Indent with emacs.
 2018-02-07 15:34:09 +01:00
Marius Bakke 2aa33bf41b
gnu: python-mando: Update to 0.6.4. 
* gnu/packages/python.scm (python-mando): Update to 0.6.4.
[propagated-inputs]: Add PYTHON-SIX.
[native-inputs]: Remove PYTHON-SPHINX and PYTHON-PARAMUNITTEST.  Add PYTHON-PYTEST.
 2018-02-07 15:34:09 +01:00
Marius Bakke 3cbddeec39
gnu: python-tqdm: Update to 4.19.5. 
* gnu/packages/python.scm (python-tqdm): Update to 4.19.5.
[native-inputs]: Remove PYTHON-NOSE-TIMER and PYTHON-VIRTUALENV.
 2018-02-07 15:34:09 +01:00
Marius Bakke 01af1e11a6
gnu: python2-flake8: Fix python-enum34 propagation. 
* gnu/packages/python.scm (python2-flake8)[propagated-inputs]: Replace
PYTHON2-ENUM with PYTHON2-ENUM34.
 2018-02-07 15:34:09 +01:00
Marius Bakke 9e94d063ab
gnu: multiqc: Update to 1.4. 
* gnu/packages/bioinformatics.scm (multiqc): Update to 1.4.
[propagated-inputs]: Remove PYTHON-ENUM34.
 2018-02-07 15:34:08 +01:00
Ricardo Wurmus 799c3c868f
gnu: sablevm: Fix broken build. 
* gnu/packages/java.scm (sablevm)[arguments]: Change threading type.
 2018-02-06 23:15:35 +01:00
Tobias Geerinckx-Rice 5ac1143dc4
gnu: whois: Expand synopsis & description. 
* gnu/packages/networking.scm (whois)[synopsis, description]: Expand.
 2018-02-06 20:02:12 +01:00
Tobias Geerinckx-Rice 11b1f89ec2
gnu: librep: Update to 0.92.7. 
* gnu/packages/sawfish.scm (librep): Update to 0.92.7.
 2018-02-06 20:02:12 +01:00
Tobias Geerinckx-Rice ccfe4aa1c0
gnu: asciidoc: Update to 8.6.10. 
* gnu/packages/documentation.scm (asciidoc): Update to 8.6.10.
[source]: Switch to new code host.
[arguments]: Add new ‘bootstrap’ phase...
[native-inputs]: ...and required autoconf.
[home-page]: Point to a more recently updated instance.
 2018-02-06 20:02:12 +01:00
Tobias Geerinckx-Rice 1ffa065c44
gnu: perl-test-simple: Update to 1.302122. 
* gnu/packages/perl-check.scm (perl-test-simple): Update to 1.302122.
 2018-02-06 20:02:11 +01:00
Christopher Baines 8db8bf921d
gnu: build: linux-boot: Remove bind-mount export. 
bind-mount is not contained within this module.

* gnu/build/linux-boot.scm: Remove bind-mount export.
 2018-02-06 17:19:28 +00:00
Ludovic Courtès 71e789319c
gnu: hwloc: Add 2.0.0. 
* gnu/packages/mpi.scm (hwloc-2.0): New variable.
* gnu/packages/patches/hwloc-tests-without-sysfs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2018-02-06 17:34:34 +01:00
Oleg Pykhalov fbcad8843a
gnu: Add python-pyaudio. 
* gnu/packages/audio.scm (python-pyaudio): New public variable.
 2018-02-06 19:16:51 +03:00
Stefan Reichör 19d93ef537
gnu: Add curseradio. 
* gnu/packages/music.scm (curseradio): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-06 17:02:46 +01:00
Ludovic Courtès 9805ad6f87
gnu: julia: Don't invoke /sbin/ldconfig. 
Reported by Marco van Hulten <marco@hulten.org>
in <https://bugs.gnu.org/30282>.

* gnu/packages/julia.scm (julia)[arguments] <'hardcode-soname-map>:
Patch out 'ldconfig' invocations.
 2018-02-06 16:12:50 +01:00
Ludovic Courtès d40b5684c5
gnu: julia: Adjust libgit2 tests. 
* gnu/packages/julia.scm (julia)[arguments] <'disable-broken-tests>:
Patch libgit2.jl.
 2018-02-06 16:12:50 +01:00
Ludovic Courtès 4e847986bc
gnu: libssh: Update to commit 239d0f7 of branch 'v0-7'. 
* gnu/packages/ssh.scm (libssh): Update to 239d0f7.
 2018-02-06 16:12:50 +01:00
Mathieu Othacehe 924b96db0a
gnu: gpsbabel: Update to 1.5.4 and fix build. 
* gnu/packages/patches/gpsbabel-minizip.patch: New file.
* gnu/packages/patches/gpsbabel-qstring.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/gps.scm (gpsbabel): Update to 1.5.4,
[source]: add two previous patches to fix build,
[snippet]: remove "gpsbabel" directory excursion,
[arguments]: ditto.
 2018-02-06 15:50:09 +01:00
Mathieu Othacehe 5365596476
gnu: Add gpxsee. 
* gnu/packages/gps.scm (gpxsee): New variable.
 2018-02-06 15:50:04 +01:00
Tobias Geerinckx-Rice 9cc03bbf0d
gnu: expect: Update to 5.45.4. 
* gnu/packages/tcl.scm (expect): Update to 5.45.4.
 2018-02-06 14:42:46 +01:00
Tobias Geerinckx-Rice 0e588d2f02
gnu: shotwell: Update to 0.27.4. 
* gnu/packages/gnome.scm (shotwell): Update to 0.27.4.
 2018-02-06 14:42:46 +01:00
Konrad Hinsen 4283653cb0
gnu: Add python-isoweek. 
* gnu/packages/python.scm (python-isoweek, python2-isoweek): New variables.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2018-02-06 12:10:17 +01:00
Danny Milosavljevic 7e2dd00bfb
gnu: Add python-funcy. 
* gnu/packages/python.scm (python-funcy, python2-funcy): New variables.
 2018-02-06 12:04:21 +01:00
Danny Milosavljevic 89c57efd78
gnu: Add python-whatever. 
* gnu/packages/python.scm (python-whatever, python2-whatever): New variables.
 2018-02-06 12:04:19 +01:00
Ricardo Wurmus e9e78d2cec
gnu: Add r-heatmaply. 
* gnu/packages/cran.scm (r-heatmaply): New variable.
 2018-02-06 11:21:57 +01:00
Ricardo Wurmus 2e9d187b87
gnu: Add r-seriation. 
* gnu/packages/cran.scm (r-seriation): New variable.
 2018-02-06 11:21:56 +01:00
Ricardo Wurmus 8e5e26d2ab
gnu: Add r-webshot. 
* gnu/packages/cran.scm (r-webshot): New variable.
 2018-02-06 11:21:56 +01:00
Ricardo Wurmus 7fe49f2a8a
gnu: Add r-gclus. 
* gnu/packages/cran.scm (r-gclus): New variable.
 2018-02-06 11:21:56 +01:00
Ricardo Wurmus ffb59bcef7
gnu: Add r-qap. 
* gnu/packages/cran.scm (r-qap): New variable.
 2018-02-06 11:21:56 +01:00
Ricardo Wurmus f285346aed
gnu: Add r-tsp. 
* gnu/packages/cran.scm (r-tsp): New variable.
 2018-02-06 11:21:56 +01:00
Ricardo Wurmus 2058e37d61
gnu: Add r-processx. 
* gnu/packages/cran.scm (r-processx): New variable.
 2018-02-06 11:21:56 +01:00
Ricardo Wurmus a3257d427e
gnu: Add r-debugme. 
* gnu/packages/cran.scm (r-debugme): New variable.
 2018-02-06 11:21:56 +01:00
Danny Milosavljevic 18adb1f00d
gnu: guile-sqlite3: Use git-version. 
* gnu/packages/guile.scm [version]: Use git-version.
 2018-02-06 09:49:08 +01:00
Danny Milosavljevic 0362e5820a
gnu: guile-sqlite3: Update to 0.0-2.21f35ca. 
* gnu/packages/guile.scm (guile-sqlite3): Update to 0.0-2.21f35ca.
 2018-02-06 09:01:41 +01:00
Leo Famulari 127dc7c7be
gnu: python-llfuse: Update to 1.3.2. 
* gnu/packages/python.scm (python-llfuse, python2-llfuse): Update to 1.3.2.
 2018-02-05 20:16:48 -05:00
Ethan R. Jones 956ba99cb7
gnu: Add python-gyp. 
* gnu/packages/python.scm (python-gyp, python2-gyp): New variables.
 2018-02-05 18:04:34 -05:00
Kei Kebreau 26ecbaf866
gnu: bigloo: Update to 4.3b. 
* gnu/packages/scheme.scm (bigloo): Update to 4.3b.
[arguments]: Add "--disable-patch" to configure flags.  Add substitution to
compile Bigloo with the correct runpath. Substitute 'invoke' for '*system*'.
 2018-02-05 17:13:56 -05:00
Leo Famulari a630c64709
gnu: p7zip: Fix CVE-2017-17969. 
* gnu/packages/patches/p7zip-CVE-2017-17969.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/compression.scm (p7zip)[source]: Use it.
 2018-02-05 16:21:40 -05:00
Maxim Cournoyer b1968d86b9
gnu: Add emacs-realgud. 
* gnu/packages/emacs.scm (emacs-realgud): New public variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-05 16:54:28 +01:00
Maxim Cournoyer fd38bfe23b
gnu: Add emacs-loc-changes. 
* gnu/packages/emacs.scm (emacs-loc-changes): New public variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-05 16:54:27 +01:00
Maxim Cournoyer fa1a17b786
gnu: Add emacs-load-relative. 
* gnu/packages/emacs.scm (emacs-load-relative): New public variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-05 16:54:27 +01:00
Maxim Cournoyer 439ad15ddd
gnu: Add emacs-test-simple. 
* gnu/packages/emacs.scm (emacs-test-simple): New public variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-05 16:54:27 +01:00
Marius Bakke 76dbb7516e
gnu: miniupnpc: Update to 2.0.20180203. 
* gnu/packages/upnp.scm (miniupnpc): Update to 2.0.20180203.
 2018-02-05 15:40:52 +01:00
Nicolas Goaziou 20c65aa1ec
gnu: solfege: Fix typo. 
* gnu/packages/music.scm (solfege): Fix typo in `fix-configuration' phase.
 2018-02-05 14:35:01 +01:00
Rutger Helling 4284d04d2e
gnu: xpra: Update to 2.2.4. 
* gnu/packages/xorg.scm (xpra): Update to 2.2.4.
 2018-02-05 14:29:10 +01:00
Leo Famulari b6f7a4076e
gnu: oil-shell: Update to 0.4.0. 
* gnu/packages/shells.scm (oil-shell): Update to 0.4.0.
 2018-02-05 04:56:25 -05:00
Arun Isaac 710d889d57
gnu: htop: Update to 2.1.0. 
* gnu/packages/admin.scm (htop): Update to 2.1.0.
[native-inputs]: Add python-minimal-wrapper.
[home-page]: Update URI.
 2018-02-05 15:02:35 +05:30
Oleg Pykhalov 555a7429ee
gnu: emacs-helm-make: Update to 0.1.0-1.feae8df. 
* gnu/packages/emacs.scm (emacs-helm-make): Update to 0.1.0-1.feae8df.
 2018-02-05 09:55:21 +03:00
Tobias Geerinckx-Rice 67f002520c
gnu: nginx-documentation: Update to 2018-01-22-2100-cfb7bd672d77. 
* gnu/packages/web.scm (nginx-documentation): Update to
2018-01-22-2100-cfb7bd672d77.
 2018-02-04 19:22:34 +01:00
Tobias Geerinckx-Rice 5de4653ded
gnu: libmicrohttpd: Update to 0.9.59. 
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.59.
 2018-02-04 19:22:34 +01:00
Tobias Geerinckx-Rice 5a719deedc
gnu: zstd: Fix typo in comment. 
* gnu/packages/compression.scm (zstd)[license]: Fix comment typo.
 2018-02-04 19:22:33 +01:00
Tobias Geerinckx-Rice af147cddd4
gnu: rtags: Update to 2.18. 
* gnu/packages/code.scm (rtags): Update to 2.18.
 2018-02-04 19:22:33 +01:00
Efraim Flashner 2fe05cb6e1
gnu: myrepos: Update to 1.20171231. 
* gnu/packages/version-control.scm (myrepos): Update to 1.20171231.
 2018-02-04 20:09:32 +02:00
Mark H Weaver 919d1f267b
Merge branch 'master' into core-updates 2018-02-04 00:13:42 -05:00
Mark H Weaver 930ebe14e1
gnu: linux-libre: Update to 4.15.1. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.15.1.
(%linux-libre-hash): Update hash.
 2018-02-04 00:05:33 -05:00
Mark H Weaver 026eaa9382
gnu: linux-libre@4.14: Update to 4.14.17. 
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.17.
(%linux-libre-4.14-hash): Update hash.
 2018-02-04 00:04:45 -05:00
Mark H Weaver 97178e2fa6
gnu: linux-libre@4.9: Update to 4.9.80. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.80.
 2018-02-04 00:04:12 -05:00
Mark H Weaver 6fe56202bc
gnu: linux-libre@4.4: Update to 4.4.115. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.115.
 2018-02-04 00:03:37 -05:00
Mark H Weaver e7ca634912
Merge branch 'master' into core-updates 2018-02-03 22:46:07 -05:00
Nicolas Goaziou 0903a51769
gnu: giac-xcas: Update to 1.4.9-45. 
* gnu/packages/algebra.scm (giac-xcas): Update to 1.4.9-45.
 2018-02-04 00:42:36 +01:00
Mathieu Othacehe 03392caace
gnu: gpsbabel: Add missing module. 
* gnu/packages/gps.scm (gpsbabel)[source]: Add (guix build utils) module for
"with-directory-excursion" macro.
 2018-02-03 21:39:54 +01:00
Efraim Flashner f860204637
gnu: Add culmus. 
* gnu/packages/fonts.scm (culmus): New variable.
 2018-02-03 20:57:14 +02:00
Oleg Pykhalov 0698633dd8
gnu: emacs-browse-at-remote: Update to 0.9.0-1.31dcf77. 
* gnu/packages/emacs.scm (emacs-browse-at-remote): Update to 0.9.0-1.31dcf77.
 2018-02-03 00:11:41 +03:00
Tobias Geerinckx-Rice 66ab28bb73
gnu: ncdu: Update to 1.13. 
* gnu/packages/ncdu.scm (ncdu): Update to 1.13.
 2018-02-02 17:48:43 +01:00
Tobias Geerinckx-Rice 4b179fb2e6
gnu: man-pages: Update to 4.15. 
* gnu/packages/man.scm (man-pages): Update to 4.15.
 2018-02-02 17:48:43 +01:00
Tobias Geerinckx-Rice b8181163a5
gnu: cfitsio: Use HTTPS home page. 
* gnu/packages/astronomy.scm (cfitsio)[home-page]: Use HTTPS.
 2018-02-02 17:44:42 +01:00
Jelle Licht b0881e0b55
gnu: node: Update to 9.4.0. 
* gnu/packages/node.scm (node): Update to 9.4.0.
[arguments]: Remove all tests that depend on eslint being available. Remove
reference to deleted test. Removed networking test.
 2018-02-02 17:21:06 +01:00
Efraim Flashner 0c8c97f45d
gnu: ethtool: Update to 4.15. 
* gnu/packages/networking.scm (ethtool): Update to 4.15.
 2018-02-02 18:10:02 +02:00
Eric Bavier c684008992
gnu: slepc: Apply invoke to configure flags. 
Follow-up to 94a1eb96d3

* gnu/packages/maths.scm (slepc)[arguments]: Use 'apply' since 'flags' is a
list of configure arguments.
 2018-02-02 08:26:59 -06:00
Eric Bavier e01397b489
gnu: Add Elemental. 
* gnu/packages/maths.scm (elemental): New variable.
 2018-02-02 08:26:59 -06:00
Eric Bavier cbc084e1a7
gnu: Add QD. 
* gnu/packages/multiprecision.scm (qd): New variable.
 2018-02-02 08:26:59 -06:00
Ludovic Courtès 02267798de
gnu: Add emacs-org-tree-slide. 
Thanks, Pjotr & Ricardo!  :-)

* gnu/packages/emacs.scm (org-tree-slide): New variable.
 2018-02-02 15:00:48 +01:00
Ben Woodcroft 7502badb81
gnu: diamond: Update to 0.9.17. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.17.
 2018-02-02 23:04:46 +10:00
Mark Meyer a9b3476239
gnu: Add fann. 
* gnu/packages/machine-learning.scm (fann): New variable.

Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>
 2018-02-02 23:04:46 +10:00
Efraim Flashner 9b94ced45c
gnu: u-boot: Remove surplus flag in 'install phase. 
* gnu/packages/bootloaders.scm (u-boot)[arguments]: Remove 'make-flags
key from custom 'install phase.
 2018-02-02 12:18:22 +02:00
Efraim Flashner f8aa265e08
gnu: linux-libre: Fix home-page url. 
* gnu/packages/linux.scm (linux-libre)[home-page]: Remove duplicate
forward slash.
 2018-02-02 12:18:22 +02:00
Leo Famulari bb9cd6de32
gnu: blender: Fix build by specifying path to Python libraries. 
* gnu/packages/graphics.scm (blender)[arguments]: Specify the Python
dependency paths in #:configure-flags.
[inputs]: Replace python-wrapper with python.
 2018-02-01 18:09:35 -05:00
ng0 a3a932c008
gnu: xorriso: Remove 'bzip2' and 'libcdio' from inputs. 
Thomas Schmitt suggested in bug#28398 to apply these changes. Neither of these
inputs are referenced by the output store item.

* gnu/packages/cdrom.scm (xorriso)[inputs]: Remove 'bzip2' and 'libcdio'.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2018-02-01 22:49:54 +00:00
ng0 53e1b30e0c
gnu: Add xfburn. 
* gnu/packages/xfce.scm (xfburn): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2018-02-01 22:49:54 +00:00
ng0 dbfab26dac
gnu: Add libisofs. 
* gnu/packages/cdrom.scm (libisofs): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2018-02-01 22:49:54 +00:00
ng0 1d8e04e64b
gnu: Add libburn. 
* gnu/packages/cdrom.scm (libburn): New variable.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2018-02-01 22:49:50 +00:00
Peter Kreye bff6739d5e
gnu: ocaml-findlib: Update to 1.7.3. 
* gnu/packages/ocaml.scm (ocaml-findlib): Update to 1.7.3.
* gnu/packages/ocaml.scm (ocaml-findlib-1.7.3): Removed.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2018-02-01 23:09:29 +01:00
Peter Kreye a9e9fd1506
gnu: Add ocaml-tsdl. 
* gnu/packages/ocaml.scm (ocaml-tsdl): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2018-02-01 23:09:23 +01:00
Peter Kreye c98c823704
gnu: Add ocaml-ocb-stubblr. 
* gnu/packages/ocaml.scm (ocaml-ocb-stubblr): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2018-02-01 23:09:21 +01:00
Peter Kreye 69d08bb131
gnu: Add ocaml-ctypes. 
* gnu/packages/ocaml.scm (ocaml-ctypes): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2018-02-01 23:09:19 +01:00
Peter Kreye edac535493
gnu: Add ocaml-integers. 
* gnu/packages/ocaml.scm (ocaml-integes): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2018-02-01 23:09:16 +01:00
Peter Kreye 2b4d2a4d0a
gnu: ocaml-findlib-1.7.3: Fix install. 
* gnu/packages/ocaml.scm (ocaml-findlib-1.7.3): install topfind to
lib/ocaml/site-lib

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
 2018-02-01 23:09:08 +01:00
Nicolas Goaziou 95e545a4da
gnu: solfege: Make configuration more robust to GC 
* gnu/packages/music.scm (solfege): Do not introduce store filenames in the
configuration skeleton.
[inputs]: Remove optional players.
 2018-02-01 22:38:42 +01:00
Leo Famulari 537a17fbe8
gnu: Add copyright statement for Alex Vong. 
This is a followup to commit 20be64dcf7.

* gnu/packages/base.scm: Add copyright statement.
 2018-02-01 16:14:41 -05:00
Leo Famulari eb096cdeba
gnu: libreoffice: Fix build with Poppler >= 0.62.0. 
* gnu/packages/libreoffice.scm (libreoffice)[arguments]: Patch header and
function names in 'prepare-src' phase.
 2018-02-01 15:50:25 -05:00
Christopher Baines 9b32bf6e6c
gnu: Fix and improve the mongo-tools package. 
The hash of the source for this package is wrong. Most probably because the
source was changed from a tarball to a git repository without updating the
hash. Fixing this seems to break the check phase, so I rewrote that as well,
making changes to the build and install phases as needed.

* gnu/packages/databases.scm (mongo-tools)[source]: Update the hash value.
  [arguments]: Remove the different unpack path, as this isn't necessary when
  using the git repository as a source. Move the list of tools to make it
  accessible from multiple phases. Rewrite the build phase, getting it to
  install the tools in to the location the tests seem to expect to find
  them. Replace the check phase to run the tests for each tool
  individually. Add an install phase to install the tools, now that go install
  is not being run in the build phase.
  [native-inputs]: Add go-github.com-smartystreets-goconvey as a native-input
  as this is required for running the tests.
 2018-02-01 20:21:25 +00:00
Christopher Baines 8d54ace78e
gnu: Add go-github.com-smartystreets-goconvey. 
* gnu/packages/check.scm (go-github.com-smartystreets-goconvey): New variable.
 2018-02-01 20:21:25 +00:00
Christopher Baines da6f9d41c1
gnu: Add go-github.com-jtolds-gls. 
* gnu/packages/golang.scm (go-github.com-jtolds-gls): New variable.
 2018-02-01 20:21:25 +00:00