Commit Graph

39028 Commits

Author SHA1 Message Date
Ricardo Wurmus a9815a6cf2
gnu: Add r-cistopic.
* gnu/packages/bioconductor.scm (r-cistopic): New variable.
2019-08-15 17:44:25 +02:00
Ricardo Wurmus bb88417fb7
gnu: Add r-rcistarget.
* gnu/packages/bioconductor.scm (r-rcistarget): New variable.
2019-08-15 17:44:25 +02:00
Ricardo Wurmus 19f1aac0e7
gnu: Add r-lda.
* gnu/packages/cran.scm (r-lda): New variable.
2019-08-15 17:44:25 +02:00
Ricardo Wurmus 86d3822862
gnu: Add r-liger.
* gnu/packages/cran.scm (r-liger): New variable.
2019-08-15 17:03:23 +02:00
Ricardo Wurmus 9c3bfea673
gnu: Add r-patchwork.
* gnu/packages/cran.scm (r-patchwork): New variable.
2019-08-15 17:03:23 +02:00
Ricardo Wurmus 6e7553ffe0
gnu: Add r-rann-l1.
* gnu/packages/cran.scm (r-rann-l1): New variable.
2019-08-15 17:03:23 +02:00
Rutger Helling 2cbe7044ea
Revert "gnu: libinput: Update to 1.14.0."
This reverts commit dfdd7380a1.
libinput-minimal causes too many rebuilds.
2019-08-15 16:28:21 +02:00
Rutger Helling dfdd7380a1
gnu: libinput: Update to 1.14.0.
* gnu/packages/freedesktop.scm (libinput): Update to 1.14.0.
2019-08-15 16:21:53 +02:00
Ricardo Wurmus 1c4e6aa938
gnu: Add itk-snap.
* gnu/packages/image-processing.scm (itk-snap): New variable.
2019-08-15 14:09:14 +02:00
Ricardo Wurmus 07f36b0c53
gnu: Add insight-toolkit-4.12.
* gnu/packages/image-processing.scm (insight-toolkit-4.12): New variable.
2019-08-15 14:09:14 +02:00
Ricardo Wurmus 8f4d457d93
gnu: Add insight-toolkit-4.
* gnu/packages/image-processing.scm (insight-toolkit-4): New variable.
2019-08-15 14:09:13 +02:00
Ricardo Wurmus d7701e1b94
gnu: Add insight-toolkit.
* gnu/packages/image-processing.scm (insight-toolkit): New variable.
2019-08-15 14:09:13 +02:00
Ricardo Wurmus 4243af4e57
gnu: Add vxl-1.
* gnu/packages/image-processing.scm (vxl-1): New variable.
2019-08-15 14:09:13 +02:00
Ricardo Wurmus 02e1acfb2a
gnu: Add vxl.
* gnu/packages/image-processing.scm (vxl): New variable.
2019-08-15 14:09:13 +02:00
Ricardo Wurmus 18696f7acf
gnu: Add vtk-6.
* gnu/packages/image-processing.scm (vtk-6): New variable.
2019-08-15 14:08:59 +02:00
Carl Dong 67dac6b892
gnu: mingw: Add x86_64 support.
This patch parameterizes previously hard-coded instances of
i686-w64-mingw32, adding support for x86_64-w64-mingw32.

* gnu/packages/mingw.scm (make-mingw-w64): New procedure.
(mingw-w64-i686, mingw-w64-x86_64): New variables.
(%mingw-triplet): Remove.
(mingw-w64): Update to point to 'mingw-w64-i686'.
* gnu/packages/cross-base.scm (cross-gcc): Use 'libc' keyword argument
if specified, instead of treating it as a boolean.
(native-libc): Return the correct mingw-w64 depending on machine
specified in target.
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add "x86_64-mingw".
* gnu/build/cross-toolchain.scm (set-cross-path/mingw): Replace
hardcoded 'i686-w64-mingw32' instances with 'target' keyword argument.
(cross-gcc-build-phases): Update accordingly; use 'target-mingw?'
implementation of target checking and add commentary.
* gnu/ci.scm (%cross-targets): Add "x86_64-w64-mingw32".
2019-08-14 21:29:53 +02:00
Eric Bavier 4afdb79249
gnu: onionshare: Upgrade to 2.1.
* gnu/packages/tor.scm (onionshare): Upgrade to 2.1.
[arguments]: Rename "tests" phase to "check".  Set home directory for tests.
Remove reference to closed upstream bug.
[inputs]: Add python-pycrypto and python-pysocks.
[license]: Remove bsd-3 license; relevant file no longer present.
2019-08-13 22:34:57 -05:00
Carlo Zancanaro 588a0a335d
gnu: Blender: Use opensubdiv.
Fixes <https://bugs.gnu.org/36977>.

* gnu/packages/graphics.scm (blender)[inputs]: Add opensubdiv.
[arguments]: Add "-DWITH_OPENSUBDIV=ON" to #:configure-flags.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-08-13 14:43:42 -04:00
Carlo Zancanaro 13f30b546d
gnu: Add opensubdiv.
* gnu/packages/graphics.scm (opensubdiv): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2019-08-13 14:43:39 -04:00
Marius Bakke 1b1b006afd
Merge branch 'staging' 2019-08-13 18:51:12 +02:00
Marius Bakke fc34abf8c1
gnu: xapian: Update to 1.4.12.
* gnu/packages/search.scm (xapian, python-xapian-bindings): Update to 1.4.12.
2019-08-13 18:40:55 +02:00
Marius Bakke da926c2503
gnu: ccid: Update to 1.4.31.
* gnu/packages/security-token.scm (ccid): Update to 1.4.31.
2019-08-13 18:40:55 +02:00
Marius Bakke ecfdc95a72
gnu: zathura-pdf-mupdf: Update to 0.3.5.
* gnu/packages/pdf.scm (zathura-pdf-mupdf): Update to 0.3.5.
2019-08-13 18:40:54 +02:00
Marius Bakke d08dc99fad
gnu: mupdf: Update to 1.16.1.
* gnu/packages/pdf.scm (mupdf): Update to 1.16.1.
2019-08-13 18:40:54 +02:00
Tobias Geerinckx-Rice ecab5e3529
gnu: git: Update to 2.22.1.
* gnu/packages/version-control.scm (git): Update to 2.22.1.
2019-08-13 17:09:10 +02:00
Leo Famulari 55fe9abdcc
gnu: tremc: Update to 0.9.1-0.4d50dab.
* gnu/packages/bittorrent.scm (tremc): Update to 0.9.1-0.4d50dab.
2019-08-13 11:03:27 -04:00
Nicolas Goaziou 1ae2d3a11b
gnu: emacs-relint: Update to 1.10.
* gnu/packages/emacs-xyz.scm (emacs-relint): Update to 1.10.
2019-08-13 12:52:47 +02:00
Nicolas Goaziou 77bdfe2f13
gnu: scribus: Update to 1.5.5.
* gnu/packages/scribus.scm (scribus): Update to 1.5.5.
[source]: Remove unnecessary patches and snippet.
[description]: Change freetype to FreeType.
* gnu/packages/patches/scribus-poppler.patch: Remove file.
* gnu/local.mk: Apply removal.
2019-08-13 12:44:06 +02:00
Amin Bandali f9ccde2460
gnu: Add emacs-ebdb.
* gnu/packages/emacs-xyz.scm (emacs-ebdb): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-13 12:18:52 +02:00
Brian Leung 39a6852acb
gnu: emacs-inf-ruby: Update to 2.5.2.
* gnu/packages/emacs-xyz.scm (emacs-inf-ruby): Update to 2.5.2.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-13 12:13:20 +02:00
Leo Famulari a797e55ca0
gnu: Syncthing: Update to 1.2.1.
* gnu/packages/syncthing.scm (syncthing): Update to 1.2.1.
2019-08-12 16:23:12 -04:00
Leo Famulari e9a0e4756f
gnu: go-github-com-syncthing-notify: Update to 0.0.0-5.69c7a95.
* gnu/packages/syncthing.scm (go-github-com-syncthing-notify): Update to
0.0.0-5.69c7a95.
2019-08-12 16:23:12 -04:00
Leo Famulari 158e82933c
gnu: go-github-com-lib-pq: Update to 1.2.0.
* gnu/packages/syncthing.scm (go-github-com-lib-pq): Update to 1.2.0.
2019-08-12 16:23:12 -04:00
Leo Famulari e7189e0bff
gnu: go-github-com-maruel-panicparse: Update to 1.3.0.
* gnu/packages/golang.scm (go-github-com-maruel-panicparse): Update to 1.3.0.
2019-08-12 16:23:11 -04:00
Leo Famulari 8a5073461f
gnu: go-golang-org-x-sys-unix: Update to 0.0.0-4.04f50cd.
* gnu/packages/golang.scm (go-golang-org-x-sys-unix): Update to 0.0.0-4.04f50cd.
2019-08-12 16:23:11 -04:00
Leo Famulari 6df4e6899d
gnu: MPD: Update to 0.21.13.
* gnu/packages/mpd.scm (mpd): Update to 0.21.13.
2019-08-12 16:21:52 -04:00
Leo Famulari 89ccc9ce91
gnu: dav1d: Update to 0.4.0.
* gnu/packages/video.scm (dav1d): Update to 0.4.0.
2019-08-12 16:21:49 -04:00
Nicolas Goaziou 57939283c0
gnu: mame: Fix build.
* gnu/packages/emulators.scm (mame): Apply upstream patch.
* gnu/packages/patches/mame-rapidjson-fix.patch: New file.
* gnu/local.mk: Register file.
2019-08-12 15:39:59 +02:00
Efraim Flashner c9093d2794
gnu: Add rust-winapi.
* gnu/packages/crates-io.scm (rust-winapi): New variable.
2019-08-12 11:57:33 +03:00
Efraim Flashner 07631e31b1
gnu: Add rust-winapi-x86-64-pc-windows-gnu.
* gnu/packages/crates-io.scm (rust-winapi-x86-64-pc-windows-gnu): New
variable.
2019-08-12 11:57:33 +03:00
Efraim Flashner 58fdf6e1f2
gnu: Add rust-winapi-i686-pc-windows-gnu.
* gnu/packages/crates-io.scm (rust-winapi-i686-pc-windows-gnu): New
variable.
2019-08-12 11:57:33 +03:00
Efraim Flashner 2a13c9fa5c
gnu: Add rust-wasm-bindgen-shared.
* gnu/packages/crates-io.scm (rust-wasm-bindgen-shared): New variable.
2019-08-12 11:57:33 +03:00
Efraim Flashner ede033176a
gnu: Add rust-unindent.
* gnu/packages/crates-io.scm (rust-unindent): New variable.
2019-08-12 11:57:32 +03:00
Efraim Flashner 96bb8fd065
gnu: Add rust-unicode-width.
* gnu/packages/crates-io.scm (rust-unicode-width): New variable.
2019-08-12 11:57:32 +03:00
Efraim Flashner f706f5dcf0
gnu: Add rust-ucd-util.
* gnu/packages/crates-io.scm (rust-ucd-util): New variable.
2019-08-12 11:57:32 +03:00
Efraim Flashner 92a292f14f
gnu: Add rust-typenum.
* gnu/packages/crates-io.scm (rust-typenum): New variable.
2019-08-12 11:57:31 +03:00
Efraim Flashner eca548232c
gnu: Add rust-synstructure-test-traits.
* gnu/packages/crates-io.scm (rust-synstructure-test-traits): New
variable.
2019-08-12 11:57:31 +03:00
Efraim Flashner 3ded5e3f70
gnu: Add rust-strsim.
* gnu/packages/crates-io.scm (rust-strsim): New variable.
2019-08-12 11:57:31 +03:00
Efraim Flashner 0d601e3860
gnu: Add rust-stdweb-internal-runtime.
* gnu/packages/crates-io.scm (rust-stdweb-internal-runtime): New
variable.
2019-08-12 11:57:31 +03:00
Efraim Flashner a60f26b24d
gnu: Add rust-spin.
* gnu/packages/crates-io.scm (rust-spin): New variable.
2019-08-12 11:57:30 +03:00
Efraim Flashner b158738a04
gnu: Add rust-slab.
* gnu/packages/crates-io.scm (rust-slab): New variable.
2019-08-12 11:57:30 +03:00
Efraim Flashner 9cbb0c97ce
gnu: Add rust-shlex.
* gnu/packages/crates-io.scm (rust-shlex): New variable.
2019-08-12 11:57:30 +03:00
Efraim Flashner b7ca017ad3
gnu: Add rust-semver-parser.
* gnu/packages/crates-io.scm (rust-semver-parser): New variable.
2019-08-12 11:57:29 +03:00
Efraim Flashner ac3e813b84
gnu: Add rust-scopeguard.
* gnu/packages/crates-io.scm (rust-scopeguard): New variable.
2019-08-12 11:57:29 +03:00
Efraim Flashner cbfef1f903
gnu: Add rust-scoped-tls.
* gnu/packages/crates-io.scm (rust-scoped-tls): New variable.
2019-08-12 11:57:29 +03:00
Efraim Flashner f6a1efbca4
gnu: Add rust-rustc-std-workspace-core.
* gnu/packages/crates-io.scm (rust-rustc-std-workspace-core): New
variable.
2019-08-12 11:57:29 +03:00
Efraim Flashner dea7871742
gnu: Add rust-quick-error.
* gnu/packages/crates-io.scm (rust-quick-error): New variable.
2019-08-12 11:57:28 +03:00
Efraim Flashner 3bb3a9a021
gnu: Add rust-ppv-lite86.
* gnu/packages/crates-io.scm (rust-ppv-lite86): New variable.
2019-08-12 11:57:28 +03:00
Efraim Flashner b7d218d8cb
gnu: Add rust-pocket-resources.
* gnu/packages/crates-io.scm (rust-pocket-resources): New variable.
2019-08-12 11:57:28 +03:00
Efraim Flashner b1c3b9e73b
gnu: Add rust-plain.
* gnu/packages/crates-io.scm (rust-plain): New variable.
2019-08-12 11:57:27 +03:00
Efraim Flashner b275df9cd3
gnu: Add rust-pin-utils.
* gnu/packages/creates-io.scm (rust-pin-utils): New variable.
2019-08-12 11:57:27 +03:00
Efraim Flashner e11365fdad
gnu: Add rust-percent-encoding.
* gnu/packages/creates-io.scm (rust-percent-encoding): New variable.
2019-08-12 11:57:27 +03:00
Efraim Flashner f22f05d901
gnu: Add rust-peeking-take-while.
* gnu/packages/crates-io.scm (rust-peeking-take-while): New variable.
2019-08-12 11:57:27 +03:00
Efraim Flashner 0c6759d87e
gnu: Add rust-md5.
* gnu/packages/creates-io.scm (rust-md5): New variable.
2019-08-12 11:57:26 +03:00
Efraim Flashner e7ffbe2fda
gnu: Add rust-matches.
* gnu/packages/crates-io.scm (rust-matches): New variable.
2019-08-12 11:57:26 +03:00
Efraim Flashner 9c6301319e
gnu: Add rust-maplit.
* gnu/packages/creates-io.scm (rust-maplit): New variable.
2019-08-12 11:57:26 +03:00
Efraim Flashner bfe256ba2c
gnu: Add rust-json.
* gnu/packages/creates-io.scm (rust-json): New variable.
2019-08-12 11:57:25 +03:00
Efraim Flashner 81749732dd
gnu: Add rust-itoa.
* gnu/packages/creates-io.scm (rust-itoa): New variable.
2019-08-12 11:57:25 +03:00
Efraim Flashner 1d5c422c4a
gnu: Add rust-hex.
* gnu/packages/crates-io.scm (rust-hex): New variable.
2019-08-12 11:57:25 +03:00
Efraim Flashner 1956ba239c
gnu: Add rust-futures.
* gnu/packages/crates-io.scm (rust-futures): New variable.
2019-08-12 11:57:25 +03:00
Efraim Flashner 6b69f9f4e3
gnu: Add rust-fs-extra.
* gnu/packages/creates-io.scm (rust-fs-extra): New variable.
2019-08-12 11:57:24 +03:00
Efraim Flashner 1816930430
gnu: Add rust-fnv.
* gnu/packages/crates-io.scm (rust-fnv): New variable.
2019-08-12 11:57:24 +03:00
Efraim Flashner 7469d541df
gnu: Add rust-fallible-iterator.
* gnu/packages/crates-io.scm (rust-fallible-iterator): New variable.
2019-08-12 11:57:24 +03:00
Efraim Flashner f3739ec0c1
gnu: Add rust-dtoa.
* gnu/packages/crates-io.scm (rust-dtoa): New variable.
2019-08-12 11:57:23 +03:00
Efraim Flashner f0b9ffcdee
gnu: Add rust-doc-comment.
* gnu/packages/crates-io.scm (rust-doc-comment): New variable.
2019-08-12 11:57:23 +03:00
Efraim Flashner b977128212
gnu: Add rust-discard.
* gnu/packages/crates-io.scm (rust-discard): New variable.
2019-08-12 11:57:23 +03:00
Efraim Flashner f69bf22334
gnu: Add rust-cfg-if.
* gnu/packages/crates-io.scm (rust-cfg-if): New variable.
2019-08-12 11:57:22 +03:00
Efraim Flashner dcc0069932
gnu: Add rust-bitflags.
* gnu/packages/crates-io.scm (rust-bitflags): New variable.
2019-08-12 11:57:22 +03:00
Efraim Flashner 242668bdbd
gnu: Add rust-bencher.
* gnu/packages/crates-io.scm (rust-bencher): New variable.
2019-08-12 11:57:22 +03:00
Efraim Flashner 060958949a
gnu: Add rust-autocfg.
* gnu/packages/crates-io.scm (rust-autocfg): New variable.
2019-08-12 11:57:22 +03:00
Efraim Flashner 96c71bffaa
gnu: crates-io.scm: Sort packages alphabetically.
* gnu/packages/crates-io.scm: Sort packages alphabetically.
2019-08-12 11:57:21 +03:00
Efraim Flashner 513a66c932
gnu: vifm: Re-indent package.
* gnu/packages/vim.scm (vifm)[arguments]: Re-indent section.
2019-08-12 11:56:55 +03:00
Efraim Flashner b4bd0d86a8
gnu: vifm: Update to 0.10.1.
* gnu/packages/vim.scm (vifm): Update to 0.10.1.
2019-08-12 11:56:55 +03:00
Ricardo Wurmus fdc22edb6c
gnu: r-ggplot2: Update to 3.2.1.
* gnu/packages/statistics.scm (r-ggplot2): Update to 3.2.1.
2019-08-12 10:25:29 +02:00
Ricardo Wurmus 813b7210aa
gnu: r-with-tests: Update to 3.6.1.
* gnu/packages/statistics.scm (r-with-tests): Update to 3.6.1.
2019-08-12 10:25:29 +02:00
Efraim Flashner e203e57b8a
gnu: font-gnu-unifont: Update to 12.1.03.
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 12.1.03.
2019-08-12 11:22:40 +03:00
Marius Bakke da7e59ac41
gnu: ungoogled-chromium: Update to 76.0.3809.100-0.8eba5c0 [security fixes].
This release fixes CVE-2019-5867 and CVE-2019-5868.

* gnu/packages/chromium.scm (%chromium-version): Set to 76.0.3809.100.
(%ungoogled-revision): Set to 8eba5c0.
(%chromium-origin, %ungoogled-origin): Update hashes.
2019-08-12 01:50:43 +02:00
Nicolas Goaziou 049915a961
gnu: mame: Update to 0.212.
* gnu/packages/emulators.scm (mame): Update to 0.212.
2019-08-11 23:07:20 +02:00
Tobias Geerinckx-Rice c383c36ede
gnu: openconnect: Update to 8.04.
* gnu/packages/vpn.scm (openconnect): Update to 8.04.
2019-08-11 19:43:02 +02:00
Mark H Weaver ffb7e5a8e4
gnu: linux-libre@4.9: Update to 4.9.189.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.189.
(linux-libre-4.9-pristine-source)[hash]: Update hash.
2019-08-11 13:14:59 -04:00
Mark H Weaver 5e1ab622d9
gnu: linux-libre@4.4: Update to 4.4.189.
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.189.
(linux-libre-4.4-pristine-source)[hash]: Update hash.
2019-08-11 13:14:05 -04:00
Vagrant Cascadian fae0a777dc
gnu: Update electrum to 3.3.8.
* gnu/packages/finance (electrum): Update to 3.3.8.
2019-08-11 08:42:10 -07:00
Vagrant Cascadian c91364d36c
gnu: diffoscope: Update to 120.
* gnu/packages/package-management (diffoscope): Update to 120.
2019-08-11 07:45:25 -07:00
Marius Bakke 5e5cdac0ae
Revert "gnu: python-packaging: Update to 19.1."
The new version fails tests on architectures other than x86_64.

This reverts commit cb16a9fba9.
2019-08-11 14:58:14 +02:00
Mark H Weaver dbc3f1f8b2
gnu: linux-libre: Update to 5.2.8.
* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.8.
(linux-libre-5.2-pristine-source)[hash]: Update hash.
2019-08-09 14:22:06 -04:00
Mark H Weaver f16109ccef
gnu: linux-libre@4.19: Update to 4.19.66.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.66.
(linux-libre-4.19-pristine-source)[hash]: Update hash.
2019-08-09 14:21:21 -04:00
Mark H Weaver 55ebb3ebf6
gnu: linux-libre@4.14: Update to 4.14.138.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.138.
(linux-libre-4.14-pristine-source)[hash]: Update hash.
2019-08-09 14:20:12 -04:00
Brian Leung d51f20f9b8
gnu: emacs-deadgrep: Update to 0.8-1.329119c.
* gnu/packages/emacs-xyz.scm (emacs-deadgrep): Update to 0.8-1.329119c.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-09 16:32:59 +02:00
Nicolas Goaziou b22e47a1aa
gnu: emacs-xr: Update to 1.13.
* gnu/packages/emacs-xyz.scm (emacs-xr): Update to 1.13.
2019-08-09 16:29:21 +02:00
Ricardo Wurmus e33e3a14c5
gnu: r-xml2: Update to 1.2.2.
* gnu/packages/statistics.scm (r-xml2): Update to 1.2.2.
2019-08-09 16:03:50 +02:00
Ricardo Wurmus 3ea548290a
gnu: r-ggforce: Update to 0.3.0.
* gnu/packages/cran.scm (r-ggforce): Update to 0.3.0.
[propagated-inputs]: Add r-tidyselect and r-withr.
2019-08-09 16:03:34 +02:00
Ricardo Wurmus 179ab67ace
gnu: r-tidytree: Update to 0.2.6.
* gnu/packages/cran.scm (r-tidytree): Update to 0.2.6.
2019-08-09 16:03:23 +02:00
Ricardo Wurmus c2847323d8
gnu: freebayes: Simplify and enable tests.
* gnu/packages/bioinformatics.scm (freebayes)[arguments]: Enable tests; set
make flags; add phase "fix-tests"; fix both Makefiles in "fix-makefiles"
phase; move build of tabixpp and vcflib to separate phase
"build-tabixpp-and-vcflib"; simplify make invocations; remove custom "build"
phase.
2019-08-09 12:15:26 +02:00
Ricardo Wurmus 7cd98e868e
gnu: freebayes: Move bamtools to inputs.
* gnu/packages/bioinformatics.scm (freebayes)[native-inputs]: Move bamtools
from here...
[inputs]: ...to here.
2019-08-09 12:15:26 +02:00
Arun Isaac db18d87ac3
gnu: guile-email: Update to 0.2.0.
* gnu/packages/guile-xyz.scm (guile-email): Update to 0.2.0.
[source]: Update URI.
[native-inputs]: Remove autoconf and automake. Add lzip.
[arguments]: Add GUILE_AUTO_COMPILE=0 to #:make-flags.
[home-page]: Update URI.
[description]: Update description.
2019-08-09 14:45:33 +05:30
Efraim Flashner 32c517a327
gnu: 4store: Remove unneeded build phase.
* gnu/packages/databases.scm (4store)[arguments]: Remove unneeded
'generate-configure phase.
2019-08-09 12:13:18 +03:00
Efraim Flashner 50e20b8fee
gnu: 4store: Don't use unstable tarball.
* gnu/packages/databases.scm (4store)[source]: Download using
'git-fetch'.
2019-08-09 12:12:08 +03:00
Pierre Neidhardt 8803dbdad8
gnu: Add freebayes.
* gnu/packages/bioinformatics.scm (freebayes): New variable.
2019-08-09 10:47:25 +03:00
Pierre Neidhardt 95fb1a1851
gnu: Add vcflib.
* gnu/packages/bioinformatics.scm (vcflib): New variable.
(tabixpp-freebayes): New private variable.
2019-08-09 10:43:40 +03:00
Mark H Weaver f7780fdf61
gnu: isc-dhcp: Update bundled BIND to 9.11.9.
* gnu/packages/patches/isc-dhcp-4.4.1-fixes-for-newer-bind.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (isc-dhcp): Update BIND version to 9.11.9.
[arguments]: In the 'replace-bundled-bind' phase, apply the patch.  In the
'post-configure' phase: Refine a substitute* regexp to avoid substituting an
instance of "./configure.log" in the BIND Makefile.  Substitute /usr/bin/file
in the BIND configure script.
[native-inputs]: Add 'file', 'patch', and the patch.
[inputs]: Update the hash of bind-source-tarball.
2019-08-08 17:24:21 -04:00
Jovany Leandro G.C 5cded306f9
gnu: Add cutter.
* gnu/packages/engineering.scm (cutter): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-08-08 20:14:14 +02:00
Dimakakos Dimos via Guix-patches ae54a4c0ef
gnu: Add emacs-ox-hugo.
gnu/packages/emacs-xyz.scm (emacs-ox-hugo): New variable

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-08-08 20:14:14 +02:00
Kyle Meyer a4a41a7ba8
gnu: git-annex: Update to 7.20190708.
* gnu/packages/haskell-apps.scm (git-annex): Update to 7.20190708.
[inputs]: Add new dependency, ghc-concurrent-output.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-08-08 20:14:14 +02:00
Kyle Meyer 3d45d8f14b
gnu: git-annex: Don't patch shebang used in hooks.
git-annex relies on configuring Git's pre-commit and post-receive hooks.
Avoid patching the shebang that git-annex embeds when generating these hooks
so that the hooks don't fail if garbage collection claims the bash that was
current when the annex repository was initialized.

* gnu/packages/haskell-apps.scm (git-annex):[arguments]: Patch hook shebangs
only temporarily for tests.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-08-08 20:14:14 +02:00
Brian Leung deccffb264
gnu: emacs-helpful: Update to 0.17.
* gnu/packages/emacs-xyz.scm (emacs-helpful): Update to 0.17.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-08-08 20:14:14 +02:00
Marius Bakke 36f400f616
Merge branch 'master' into staging 2019-08-08 18:14:45 +02:00
Marius Bakke ffc4869e45
gnu: ruby-pg: Update to 1.1.4.
* gnu/packages/ruby.scm (ruby-pg): Update to 1.1.4.
[inputs]: Change from POSTGRESQL-9.6 to POSTGRESQL.
2019-08-08 17:48:46 +02:00
Marius Bakke c96ec77198
gnu: exempi: Update home page.
* gnu/packages/freedesktop.scm (exempi)[home-page]: Update to current.
2019-08-08 17:48:46 +02:00
Marius Bakke 14b80bf6ca
gnu: postgresql@9: Update to 9.6.15 [fixes CVE-2019-10208].
* gnu/packages/databases.scm (postgresql-9.6): Update to 9.6.15.
2019-08-08 17:48:46 +02:00
Marius Bakke cbfddc2f33
gnu: postgresql@11: Update to 11.5 [fixes CVE-2019-10208, CVE-2019-10209].
* gnu/packages/databases.scm (postgresql-11): Update to 11.5.
2019-08-08 17:48:46 +02:00
Marius Bakke df3db97587
gnu: exempi: Update to 2.5.1.
* gnu/packages/freedesktop.scm (exempi): Update to 2.5.1.
2019-08-08 17:48:45 +02:00
Marius Bakke bd12be346b
gnu: LibRaw: Update to 0.19.4.
* gnu/packages/photo.scm (libraw): Update to 0.19.4.
2019-08-08 17:48:45 +02:00
Marius Bakke c8f5827a56
gnu: postgresql: Udpate to 10.10 [fixes CVE-2019-10208].
* gnu/packages/databases.scm (postgresql): Update to 10.10.
2019-08-08 17:32:18 +02:00
Ricardo Wurmus 7ef25083f0
gnu: r-modelr: Update to 0.1.5.
* gnu/packages/cran.scm (r-modelr): Update to 0.1.5.
[propagated-inputs]: Remove r-lazyeval; add r-rlang.
2019-08-08 17:20:46 +02:00
Ricardo Wurmus eb8963d989
gnu: r-quantreg: Update to 5.51.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.51.
2019-08-08 16:47:05 +02:00
Ricardo Wurmus eaca771e88
gnu: r-knitr: Update to 1.24.
* gnu/packages/statistics.scm (r-knitr): Update to 1.24.
2019-08-08 16:47:05 +02:00
Ricardo Wurmus 9649072cbd
gnu: r-markdown: Update to 1.1.
* gnu/packages/statistics.scm (r-markdown): Update to 1.1.
[propagated-inputs]: Add r-xfun.
2019-08-08 16:47:05 +02:00
Ricardo Wurmus d099499e0b
gnu: r-ggsignif: Update to 0.6.0.
* gnu/packages/cran.scm (r-ggsignif): Update to 0.6.0.
2019-08-08 16:47:05 +02:00
Ricardo Wurmus 90060e2071
gnu: r-hdf5array: Update to 1.12.2.
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.12.2.
2019-08-08 16:47:05 +02:00
Ricardo Wurmus a39f2e4cea
gnu: r-biocparallel: Update to 1.18.1.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.18.1.
2019-08-08 16:47:02 +02:00
Marius Bakke ba73c434e0
gnu: ToME4: Disable parallel build.
* gnu/packages/games.scm (tome4)[arguments]: Add <#:parallel-build?>.
2019-08-08 16:45:14 +02:00
Efraim Flashner 1a069a170c
Revert "gnu: Add vcflib."
This reverts commit 194e45f90a.

This commit does not have a good commit message, and it breaks master
2019-08-08 15:34:05 +03:00
Efraim Flashner 6bc63fd8a7
Revert "gnu: Add freebayes."
This reverts commit 173e046950.
2019-08-08 15:32:51 +03:00
Pierre Neidhardt 173e046950
gnu: Add freebayes.
* gnu/packages/bioinformatics.scm (freebayes): New variable.
2019-08-08 15:18:34 +03:00
Pierre Neidhardt 194e45f90a
gnu: Add vcflib.
* gnu/packages/bioinformatics.scm (vcflib): New variable.
2019-08-08 15:18:33 +03:00
Pierre Neidhardt 7d71557d4d
gnu: Add fastahack.
* gnu/packages/bioinformatics.scm (fastahack): New variable.
2019-08-08 15:18:32 +03:00
Pierre Neidhardt 70782dddff
gnu: Add fsom.
* gnu/packages/bioinformatics.scm (fsom): New variable.
2019-08-08 15:18:31 +03:00
Pierre Neidhardt 8cd51276e5
gnu: Add multichoose.
* gnu/packages/bioinformatics.scm (multichoose): New variable.
2019-08-08 15:18:30 +03:00
Pierre Neidhardt 7faa70cf2b
gnu: Add smithwaterman.
* gnu/packages/bioinformatics.scm (smithwaterman): New variable.
2019-08-08 15:18:29 +03:00
Pierre Neidhardt 62a031afc4
gnu: Add tabixpp.
* gnu/packages/bioinformatics.scm (tabixpp): New variable.
2019-08-08 15:18:14 +03:00
Efraim Flashner 8378c87a59
gnu: Add network-manager-openconnect.
* gnu/packages/gnome.scm (network-manager-openconnect): New variable.
2019-08-08 10:08:00 +03:00
Robert Vollmert caa366ec23
gnu: ghc-trifecta: Disable tests.
* gnu/packages/haskell.scm (ghc-trifecta)[arguments]: Disable tests.
2019-08-07 22:05:34 -04:00
Robert Vollmert dbfaac113a
gnu: ghc-yaml: Disable tests.
* gnu/packages/haskell.scm (ghc-yaml)[arguments]: Disable tests.
2019-08-07 22:05:34 -04:00
Robert Vollmert 9ec2d6f84c
gnu: ghc-libmpd-haskell: Disable tests.
* gnu/packages/haskell.scm (ghc-libmpd-haskell)[arguments]: Disable
tests.
2019-08-07 22:05:33 -04:00
Robert Vollmert 3755088b54
gnu: Remove ghc-packedstring.
The package has no reverse dependencies and is deprecated upstream.

* gnu/packages/haskell.scm (ghc-packedstring): Remove variable.
2019-08-07 22:05:33 -04:00
Robert Vollmert 63edeca773
gnu: Remove ghc-haddock-test.
The package doesn't build, has no reverse dependencies, and is
deprecated upstream.

* gnu/packages/haskell.scm (ghc-haddock-test): Remove variable.
2019-08-07 22:05:33 -04:00
Robert Vollmert 0d59302eba
gnu: Remove ghc-regex-tdfa-rc.
The package doesn't build, has no reverse dependencies, and is deprecated
upstream.

* gnu/packages/haskell.scm (ghc-regex-tdfa-rc): Remove variable.
2019-08-07 22:05:33 -04:00
Robert Vollmert 8ede1021c8
gnu: Add ghc-snap-server.
* gnu/packages/haskell-web.scm (ghc-snap-server): New variable.
2019-08-07 22:05:33 -04:00
Robert Vollmert 4f1793a2be
gnu: Add ghc-snap-core.
* gnu/packages/haskell-web.scm (ghc-snap-core): New variable.
2019-08-07 22:05:32 -04:00
Robert Vollmert 4ccd679f25
gnu: Add ghc-http-streams.
* gnu/packages/haskell-web.scm (ghc-http-streams): New variable.
2019-08-07 22:05:32 -04:00
Robert Vollmert 0173cdd31d
gnu: Add ghc-http-common.
* gnu/packages/haskell-web.scm (ghc-http-common): New variable.
2019-08-07 22:05:32 -04:00
Robert Vollmert 4ba66e6f16
gnu: Add ghc-openssl-streams.
* gnu/packages/haskell-crypto.scm (ghc-openssl-streams): New variable.
2019-08-07 22:05:32 -04:00
Robert Vollmert 0925b80409
gnu: Add ghc-hsopenssl.
* gnu/packages/haskell-crypto.scm (ghc-hsopenssl): New variable.
2019-08-07 22:05:32 -04:00
Robert Vollmert 7b01a977e4
gnu: Add ghc-io-streams-haproxy.
* gnu/packages/haskell-xyz.scm (ghc-io-streams-haproxy): New variable.
2019-08-07 22:05:32 -04:00
Robert Vollmert 658dbc7ff2
gnu: Add ghc-io-streams.
* gnu/packages/haskell-xyz.scm (ghc-io-streams): New variable.
2019-08-07 22:05:31 -04:00
Robert Vollmert 14e4199646
gnu: Add ghc-zlib-bindings.
* gnu/packages/haskell-xyz.scm (ghc-zlib-bindings): New variable.
2019-08-07 22:05:31 -04:00
Robert Vollmert bbf8bf31e4
gnu: Add ghc-threads.
* gnu/packages/haskell-xyz.scm (ghc-threads): New variable.
2019-08-07 22:05:31 -04:00
Robert Vollmert b57e99f574
gnu: Add ghc-readable.
* gnu/packages/haskell-xyz.scm (ghc-readable): New variable.
2019-08-07 22:05:31 -04:00
Robert Vollmert efb96749a2
gnu: Add ghc-concurrent-extra.
* gnu/packages/haskell-xyz.scm (ghc-concurrent-extra): New variable.
2019-08-07 22:05:31 -04:00
Robert Vollmert 79fcc5e59b
gnu: Add ghc-language-glsl.
* gnu/packages/haskell-xyz.scm (ghc-language-glsl): New variable.
2019-08-07 22:05:30 -04:00
Robert Vollmert 6b34d01cbf
gnu: Add ghc-prettyclass.
* gnu/package/haskell-xyz.scm: New file.
* gnu/local.mk: Add it.
* gnu/packages/haskell-xyz.scm (ghc-prettyclass): New variable.
2019-08-07 22:05:30 -04:00
Robert Vollmert 91732735f6
gnu: ghc-ansi-terminal: Downgrade to 0.8.0.4.
This reverts commits

    cbff89d126,
    5a499d0f7d, and
    4e3ebbfb16.

* gnu/packages/haskell.scm (ghc-ansi-terminal): Downgrade to 0.8.0.4.
(ghc-ansi-terminal-0.8): Delete variable.
(ghc-ansi-wl-pprint, ghc-concurrent-output)[inputs]: Replace
'ghc-ansi-terminal-0.8' with 'ghc-ansi-terminal'.
* gnu/packages/haskell-check.scm (ghc-hedgehog)[inputs]: Likewise.
2019-08-07 22:05:30 -04:00
Robert Vollmert e8aea9018b
gnu: ghc-validation: Downgrade to 1.
This is the Stackage LTS version, which is compatible with
ansi-terminal 0.8.

* gnu/packages/haskell.scm (ghc-validation): Downgrade to 1.
2019-08-07 22:05:30 -04:00
Robert Vollmert f74aa98ed7
gnu: ghc-concurrent-output: Downgrade to 1.10.9.
This is the Stackage LTS version, which is compatible with
ansi-terminal 0.8.

* gnu/packages/haskell.scm (ghc-concurrent-output): Downgrade to 1.10.9
and use ghc-ansi-terminal-0.8.
2019-08-07 22:05:30 -04:00
Robert Vollmert 1c54c30d9c
gnu: ghc-validation: Do not generate 'Setup.hs'.
This is handled by the build system.

* gnu/packages/haskell.scm (ghc-validation): Remove 'arguments'.
2019-08-07 22:05:30 -04:00
Robert Vollmert a1eb8be8ca
gnu: Remove ghc-parsec, ghc-stm, ghc-text, ghc-xhtml.
These are ghc-8.4-bundled packages, removing to avoid build
conflicts.

* gnu/packages/haskell.scm (ghc-parsec, ghc-stm, ghc-text): Remove.
* gnu/packages/haskell-web.scm (ghc-xhtml): Remove.
* gnu/packages/agda.scm (agda)[inputs]: Remove ghc-stm and ghc-text.
* gnu/packages/bioinformatics.scm (ngless)[inputs]: Remove ghc-parsec and
ghc-text.
* gnu/packages/haskell-apps.scm (darcs)[inputs]: Remove ghc-parsec.
(git-annex)[inputs]: Remove ghc-stm and ghc-text.
(ghc-sdl2)[inputs]: Remove ghc-text.
(ghc-sdl2-image)[inputs]: Remove ghc-text.
* gnu/packages/haskell-check.scm (ghc-tasty-ant-xml)[inputs]: Remove ghc-stm.
(ghc-tasty)[inputs]: Remove ghc-stm.
(ghc-tasty-rerun)[inputs]: Same.
(ghc-quickcheck-instances)[inputs]: Remove ghc-text.
(ghc-hedgehog)[inputs]: Remove ghc-stm.
* gnu/packages/haskell-crypto.scm (ghc-asn1-encoding)[inputs]: Remove
ghc-text.
* gnu/packages/haskell-web.scm (ghc-tagsoup)[inputs]: Remove ghc-text.
(ghc-cookie)[inputs]: Same.
(ghc-http-types)[inputs]: Same.
(ghc-http)[inputs]: Remove ghc-parsec.
(ghc-http-client)[inputs]: Remove ghc-text.
(ghc-http2)[inputs]: Remove ghc-stm.
(ghc-http-conduit)[native-inputs]: Remove ghc-text.
(ghc-wai)[inputs]: Same.
(ghc-wai-extra)[inputs]: Same.
(ghc-warp)[inputs]: Remove ghc-stm and ghc-text.
(ghc-xss-sanitize)[native-inputs]: Remove ghc-text.
(ghc-css-text)[inputs]: Same.
(ghc-mime-types)[inputs]: Same.
(ghc-blaze-html)[inputs]: Same.
(ghc-aeson)[inputs]: Same.
(ghc-aeson-pretty)[inputs]: Same.
(ghc-aeson-qq)[inputs]: Remove ghc-text and ghc-parsec.
(ghc-multipart)[inputs]: Remove ghc-parsec.
(ghc-uri-encode)[inputs]: Remove ghc-text.
(ghc-path-pieces)[inputs]: Same.
(ghc-yesod-core)[inputs]: Remove ghc-text and ghc-parsec.
(ghc-yesod-persistent)[inputs]: Remove ghc-text.
(ghc-yesod-form)[inputs]: Same.
(ghc-yesod)[inputs]: Same.
(ghc-hxt-regex-xmlschema)[inputs]: Remove ghc-parsec and ghc-text.
(ghc-hxt)[inputs]: Remove ghc-parsec.
* gnu/packages/haskell.scm (ghc-convertible)[inputs]: Remove ghc-text.
(ghc-double-conversion)[inputs]: Same.
(ghc-tree-diff)[inputs]: Remove ghc-parsec and ghc-text.
[native-inputs]: Remove ghc-parsec.
(ghc-cgi)[inputs]: Remove ghc-parsec.
(hlint)[inputs]: Remove ghc-text.
(ghc-openglraw)[inputs]: Remove ghc-text.
(ghc-opengl)[inputs]: Same.
(ghc-streaming-commons)[inputs]: Remove ghc-stm and ghc-text.
(ghc-hackage-security)[inputs]: Remove ghc-parsec.
(cabal-install)[inputs]: Remove ghc-stm.
(ghc-parsec-numbers)[inputs]: Remove ghc-parsec.
(ghc-safesemaphore)[inputs]: Remove ghc-stm.
(ghc-text-binary)[inputs]: Remove ghc-text.
(ghc-hashable)[inputs]: Remove ghc-text.
(ghc-transformers-base)[inputs]: Remove ghc-stm.
(ghc-indents)[inputs]: Remove ghc-parsec.
(ghc-regex-tdfa-rc)[inputs]: Same.
(ghc-regex-tdfa-text)[inputs]: Same.
(ghc-regex)[inputs]: Remove ghc-text.
(ghc-parsers)[inputs]: Remove ghc-parsec and ghc-text.
(ghc-attoparsec)[inputs]: Remove ghc-text.
(ghc-attoparsec-bootstrap)[inputs]: Same.
(ghc-zip-archive)[inputs]: Same.
(ghc-polyparse)[inputs]: Same.
(ghc-reducers)[inputs]: Same.
(ghc-xml)[inputs]: Same.
(ghc-feed)[inputs]: Same.
(ghc-exceptions)[inputs]: Remove ghc-stm.
(ghc-case-insensitive)[inputs]: Remove ghc-text.
(ghc-megaparsec)[inputs]: Same.
(ghc-network-uri)[inputs]: Remove ghc-parsec.
(ghc-monad-control)[inputs]: Remove ghc-stm.
(ghc-blaze-builder)[inputs]: Remove ghc-text.
(ghc-blaze-markup)[inputs]: Same.
(ghc-async)[inputs]: Remove ghc-stm.
(ghc-invariant)[inputs]: Same.
(ghc-statevar)[inputs]: Same.
(ghc-lens)[inputs]: Remove ghc-text.
(ghc-cheapskate)[inputs]: Same.
(ghc-semigroups)[inputs]: Same.
(ghc-semigroups-bootstrap)[inputs]: Same.
(ghc-fast-logger)[inputs]: Same.
(ghc-scientific)[inputs]: Same.
(ghc-scientific-bootstrap)[inputs]: Same.
(ghc-texmath)[inputs]: Remove ghc-parsec.
(ghc-highlighting-kate)[inputs]: Same.
(ghc-cmark)[inputs]: Remove ghc-text.
(ghc-cmark-gfm)[inputs]: Same.
(ghc-th-lift-instances)[inputs]: Same.
(ghc-yaml)[inputs]: Same.
(ghc-hslua)[inputs]: Same.
(ghc-hslua-module-text)[inputs]: Same.
(ghc-skylighting-core)[inputs]: Same.
(ghc-doctemplates)[inputs]: Remove ghc-text and ghc-parsec.
(ghc-pandoc)[inputs]: Same.
(ghc-typed-process)[inputs]: Remove ghc-stm.
(ghc-conduit-extra)[inputs]: Remove ghc-stm and ghc-text.
(ghc-xml-types)[inputs]: Remove ghc-text.
(ghc-xml-conduit)[inputs]: Same.
(ghc-pandoc-citeproc)[inputs]: Remove ghc-text and ghc-parsec.
(ghc-regex-tdfa)[inputs]: Remove ghc-parsec.
(ghc-wl-pprint-text)[inputs]: Remove ghc-text.
(ghc-graphviz)[inputs]: Same.
(ghc-system-filepath-bootstrap)[inputs]: Same.
(ghc-system-fileio-bootstrap)[inputs]: Same.
(ghc-shelly)[inputs]: Same.
(ghc-chell)[inputs]: Same.
(ghc-system-filepath)[inputs]: Same.
(ghc-system-fileio)[inputs]: Same.
(ghc-fsnotify)[inputs]: Same.
(ghc-json)[inputs]: Remove ghc-text and ghc-parsec.
(ghc-esqueleto)[inputs]: Remove ghc-text.
(shellcheck)[inputs]: Remove ghc-parsec.
(ghc-errors)[inputs]: Remove ghc-text.
(ghc-chunked-data)[inputs]: Same.
(ghc-uuid-types)[inputs]: Same.
(ghc-uuid)[inputs]: Same.
(ghc-rebase)[inputs]: Remove ghc-stm and ghc-text.
(ghc-foldl)[inputs]: Remove ghc-text.
(ghc-mono-traversable)[inputs]: Same.
(ghc-conduit-combinators)[inputs]: Same.
(ghc-aws)[inputs]: Same.
(ghc-stm-chans)[inputs]: Remove ghc-stm.
(ghc-monad-logger)[inputs]: Remove ghc-text and ghc-stm.
(ghc-shakespeare)[inputs]: Remove ghc-parsec and ghc-text.
(ghc-resource-pool)[inputs]: Remove ghc-stm.
(ghc-attoparsec-iso8601)[inputs]: Remove ghc-text.
(ghc-http-api-data)[inputs]: Same.
(ghc-persistent)[inputs]: Same.
(ghc-aeson-compat)[inputs]: Same.
(ghc-persistent-template)[inputs]: Same.
(ghc-unliftio)[inputs]: Remove ghc-stm.
(ghc-persistent-sqlite)[native-inputs]: Remove ghc-text.
(ghc-bytes)[inputs]: Same.
(ghc-missingh)[inputs]: Remove ghc-parsec.
(ghc-rio)[inputs]: Remove ghc-text.
(ghc-cairo)[inputs]: Same.
(ghc-atomic-write)[inputs]: Remove ghc-text.
[native-inputs]: Same.
(ghc-stm-conduit)[inputs]: Remove ghc-stm.
(ghc-conduit-algorithms)[inputs]: Same.
(ghc-interpolate)[native-inputs]: Remove ghc-text.
(ghc-hpack)[inputs]: Same.
(ghc-inline-c)[inputs]: Remove ghc-parsec.
(ghc-configurator)[inputs]: Remove ghc-text.
(ghc-c2hs)[native-inputs]: Same.
(ghc-libmpd)[inputs]: Same.
(ghc-concurrent-output)[inputs]: Remove ghc-stm.
* gnu/packages/idris.scm (idris)[inputs]: Remove ghc-text.
* gnu/packages/wm.scm (xmobar)[inputs]: Remove ghc-parsec and ghc-stm.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-07 22:05:29 -04:00
Robert Vollmert cce84c34cd
gnu: Add ghc-8.6.
* gnu/packages/haskell.scm (ghc-8.6): New variable.

Co-authored-by: Timothy Sample <samplet@ngyro.com>
2019-08-07 22:05:29 -04:00
Robert Vollmert a62ddb748f
gnu: ghc-8: Rename to 'ghc-8.4'.
* gnu/packages/haskell.scm (ghc-8): Rename to...
(ghc-8.4): ...this.
(ghc-8): New variable.
2019-08-07 22:05:23 -04:00
Marius Bakke 8e7f97b9ff
Merge branch 'master' into staging 2019-08-08 00:35:37 +02:00
Marius Bakke ba7ff983d6
gnu: wpa-supplicant: Update to 2.9.
* gnu/packages/admin.scm (wpa-supplicant-minimal): Update to 2.9.
2019-08-08 00:30:56 +02:00
Marius Bakke 277faff8ff
gnu: xf86-video-intel: Update to 2.99.917-14.6f4972d.
* gnu/packages/xorg.scm (xf86-video-intel): Update to 2.99.917-14.6f4972d.
2019-08-08 00:30:56 +02:00
Ricardo Wurmus 9bd1333e58
Merge remote-tracking branch 'origin/master' into wip-texlive 2019-08-07 22:26:55 +02:00
Marius Bakke fa228db78b
gnu: mesa: Update to 19.1.4.
* gnu/packages/gl.scm (mesa): Update to 19.1.4.
2019-08-07 22:07:41 +02:00
Efraim Flashner 355ba48c46
gnu: igt-gpu-tools: Rework custom phases.
* gnu/packages/admin.scm (igt-gpu-tools)[arguments]: Use custom 'autogen
phase to replace 'bootstrap phase.
2019-08-07 20:06:01 +03:00
Efraim Flashner 72bc58f850
gnu: dosbox: Remove extra build phase.
* gnu/packages/emulators.scm (dosbox)[arguments]: Remove unneeded
'autogen phase.
2019-08-07 20:06:00 +03:00
Efraim Flashner 3192f25948
gnu: zimg: Remove extra build phase.
* gnu/packages/image.scm (zimg)[arguments]: Remove unneeded 'autogen
phase.
2019-08-07 20:06:00 +03:00
Efraim Flashner 384242adf1
gnu: leptonica: Remove extra build phase.
* gnu/packages/image.scm (leptonica)[arguments]: Remove unneeded
'autogen phase.
2019-08-07 20:06:00 +03:00
Efraim Flashner a491856f2a
gnu: ghmm: Remove extra build phase.
* gnu/packages/machine-learning.scm (ghmm)[arguments]: Remove unneeded
'autogen phase.
2019-08-07 20:05:59 +03:00
Efraim Flashner e3a699380e
gnu: ghmm: Update source file-name field.
* gnu/packages/machine-learning.scm (ghmm)[source]: Change 'file-name
field to include '-checkout' string.
2019-08-07 20:05:59 +03:00
Efraim Flashner 1f53fdae82
gnu: dovecot-libsodium-plugin: Remove extra build phase.
* gnu/packages/mail.scm (dovecot-libsodium-plugin)[arguments]: Remove
unneeded 'autogen phase.
2019-08-07 20:05:59 +03:00
Efraim Flashner 7b0efd4c32
gnu: dovecot-trees: Remove extra build phase.
* gnu/packages/mail.scm (dovecot-trees)[arguments]: Remove unneeded
'autogen phase.
2019-08-07 20:05:58 +03:00
Efraim Flashner 02abfcca46
gnu: libetpan: Rework custom phases.
* gnu/packages/mail.scm (libetpan)[arguments]: Use custom 'autogen phase
to replace 'boostrap phase.
2019-08-07 20:05:58 +03:00
Efraim Flashner 1d05b683ef
gnu: libmediainfo: Remove extra build phase.
* gnu/packages/video.scm (libmediainfo)[arguments]: Remove unneeded
'autogen phase.
2019-08-07 20:05:58 +03:00
Efraim Flashner d05e607c9d
gnu: libsmpeg: Remove extra build phase.
* gnu/packages/video.scm (libsmpeg)[arguments]: Remove unnecessary
'autogen phase.
2019-08-07 20:05:57 +03:00
Efraim Flashner 2230039427
gnu: vapoursynth: Remove extra build phase.
* gnu/packages/video.scm (vapoursynth)[arguments]: Remove unneeded
'autogen phase.
2019-08-07 20:05:57 +03:00
Efraim Flashner fe7023a744
gnu: i3blocks: Remove extra build phase.
* gnu/packages/wm.scm (i3blocks)[arguments]: Remove unneeded 'autogen
phase.
2019-08-07 20:05:57 +03:00
Efraim Flashner db736ca20c
gnu: ocproxy: Remove extra build phase.
* gnu/packages/vpn.scm (ocproxy)[arguments]: Remove unneeded 'autogen
phase.
2019-08-07 20:05:57 +03:00
Efraim Flashner 0d7f282b02
gnu: openconnect: Fix propagated-inputs.
* gnu/packages/vpn.scm (openconnect)[inputs]: Move libxml2, gnutls,
zlib ...
[propagated-inputs]: ... to here.
2019-08-07 20:05:56 +03:00
Ricardo Wurmus 9fa7c20be9
gnu: gnome-maps: Fix runtime error.
Fixes <https://bugs.gnu.org/35761>.

* gnu/packages/geo.scm (gnome-maps)[arguments]: Add lib output of
gnome-online-accounts and geocode-glib to LD_LIBRARY_PATH.
[inputs]: Add gnome-online-accounts:lib.
2019-08-07 19:03:19 +02:00
Ricardo Wurmus fdc0688cba
gnu: r-dt: Update to 0.8.
* gnu/packages/statistics.scm (r-dt): Update to 0.8.
[propagated-inputs]: Add r-jsonlite.
2019-08-07 12:54:43 +02:00
Ricardo Wurmus 42a8b01d15
gnu: r-epi: Update to 2.38.
* gnu/packages/cran.scm (r-epi): Update to 2.38.
2019-08-07 12:54:43 +02:00
Ricardo Wurmus 2132e92261
gnu: r-ggpubr: Update to 0.2.2.
* gnu/packages/cran.scm (r-ggpubr): Update to 0.2.2.
[propagated-inputs]: Add r-rlang.
2019-08-07 12:54:43 +02:00
Ricardo Wurmus 33af00eea4
gnu: r-tinytex: Update to 0.15.
* gnu/packages/cran.scm (r-tinytex): Update to 0.15.
2019-08-07 12:54:43 +02:00
Ricardo Wurmus f503ed92d2
gnu: r-servr: Update to 0.15.
* gnu/packages/cran.scm (r-servr): Update to 0.15.
2019-08-07 12:54:43 +02:00
Rutger Helling 18e700517e
gnu: dolphin-emu: Update to commit 24718c1.
* gnu/packages/emulators.scm (dolphin-emu): Update to commit 24718c1.
2019-08-07 08:15:28 +02:00
Mark H Weaver 9d52e3f3d5
gnu: linux-libre: Update to 5.2.7.
* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.7.
(linux-libre-5.2-pristine-source)[hash]: Update hash.
2019-08-07 00:28:32 -04:00
Mark H Weaver 9f90e58c4a
gnu: linux-libre@4.19: Update to 4.19.65.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.65.
(linux-libre-4.19-pristine-source)[hash]: Update hash.
2019-08-07 00:28:30 -04:00
Mark H Weaver 7acea31bbc
gnu: linux-libre@4.14: Update to 4.14.137.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.137.
(linux-libre-4.14-pristine-source)[hash]: Update hash.
2019-08-07 00:28:28 -04:00
Mark H Weaver 2b6c7a7cbc
gnu: linux-libre@4.9: Update to 4.9.188.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.188.
(linux-libre-4.9-pristine-source)[hash]: Update hash.
2019-08-07 00:28:12 -04:00
Mark H Weaver ad6814557e
gnu: linux-libre@4.4: Update to 4.4.188.
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.188.
(linux-libre-4.4-pristine-source)[hash]: Update hash.
2019-08-07 00:23:20 -04:00
Ricardo Wurmus f2758945fe
gnu: r-ggplotify: Update to 0.0.4.
* gnu/packages/cran.scm (r-ggplotify): Update to 0.0.4.
2019-08-06 23:38:22 +02:00
Ricardo Wurmus 5fe9ce982d
gnu: r-bayestestr: Update to 0.2.5.
* gnu/packages/cran.scm (r-bayestestr): Update to 0.2.5.
2019-08-06 23:38:22 +02:00
Christopher Baines ec405a4b01
gnu: perl-hash-merge: Change inputs to propagated-inputs.
Clone::Choose is required at runtime, so this input needs to be
propagated. This change fixes the sqitch package.

* gnu/packages/perl.scm (perl-hash-merge)[inputs]: Change to
propagated-inputs.
2019-08-06 19:53:51 +01:00
Rutger Helling 86445c8e35
gnu: ffmpeg: Update to 4.2.
* gnu/packages/video.scm (ffmpeg): Update to 4.2.
[inputs]: Add dav1d.
* gnu/packages/video.scm (ffmpeg-3.4)[arguments]: Adjust inheritance.
2019-08-06 18:59:28 +02:00
Marius Bakke 58e37b5441
gnu: nss: Fix build failure on armhf-linux.
Fixes <https://bugs.gnu.org/36930>.

* gnu/packages/patches/nss-freebl-stubs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/nss.scm (nss)[source](patches): Add it.
2019-08-06 17:06:57 +02:00
Ricardo Wurmus b120789193
gnu: r-rsubread: Update to 1.34.6.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 1.34.6.
2019-08-06 15:49:00 +02:00
Ricardo Wurmus d6158ecb3b
gnu: r-abaenrichment: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-abaenrichment): Update to 1.14.1.
2019-08-06 15:49:00 +02:00
Ricardo Wurmus fbe5a0872f
gnu: r-atacseqqc: Update to 1.8.5.
* gnu/packages/bioconductor.scm (r-atacseqqc): Update to 1.8.5.
2019-08-06 15:49:00 +02:00
Ricardo Wurmus fcbd8960c2
gnu: r-genomicinteractions: Update to 1.18.1.
* gnu/packages/bioconductor.scm (r-genomicinteractions): Update to 1.18.1.
2019-08-06 15:49:00 +02:00
Ricardo Wurmus 109b8ad5f9
gnu: r-chippeakanno: Update to 3.18.2.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.18.2.
2019-08-06 15:49:00 +02:00
Ricardo Wurmus c8e141ab02
gnu: r-msnid: Update to 1.18.1.
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.18.1.
2019-08-06 15:49:00 +02:00
Ricardo Wurmus afe4be49f1
gnu: r-rcas: Update to 1.10.1.
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.10.1.
2019-08-06 15:49:00 +02:00
Ricardo Wurmus 76d9b08e1b
gnu: r-genomicfeatures: Update to 1.36.4.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.36.4.
2019-08-06 15:48:59 +02:00
Ricardo Wurmus e16fe0b50a
gnu: r-rtracklayer: Update to 1.44.2.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.44.2.
2019-08-06 15:48:59 +02:00
Ricardo Wurmus 6f8760d9f8
gnu: r-summarizedexperiment: Update to 1.14.1.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.14.1.
2019-08-06 15:48:59 +02:00
Ricardo Wurmus 2ebd2b440d
gnu: r-biomart: Update to 2.40.3.
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.40.3.
2019-08-06 15:48:59 +02:00
Ricardo Wurmus fbd761fe9b
gnu: r-limma: Update to 3.40.6.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.40.6.
2019-08-06 15:48:59 +02:00
Ricardo Wurmus 8a5f9d3d56
gnu: r-edger: Update to 3.26.6.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.26.6.
2019-08-06 15:48:59 +02:00
Ricardo Wurmus 00300de5d0
gnu: r-xgboost: Update to 0.90.0.2.
* gnu/packages/cran.scm (r-xgboost): Update to 0.90.0.2.
2019-08-06 15:48:59 +02:00
Ricardo Wurmus 6fa5987606
gnu: r-citr: Update to 0.3.1.
* gnu/packages/cran.scm (r-citr): Update to 0.3.1.
[propagated-inputs]: Remove r-bibtex.
2019-08-06 15:48:59 +02:00
Ricardo Wurmus 5b87fae3f8
gnu: r-enrichr: Update to 2.0.
* gnu/packages/cran.scm (r-enrichr): Update to 2.0.
2019-08-06 15:48:59 +02:00
Ricardo Wurmus 006c3dc386
gnu: r-dalex: Update to 0.4.4.
* gnu/packages/cran.scm (r-dalex): Update to 0.4.4.
2019-08-06 15:48:58 +02:00
Ricardo Wurmus 22d556a8e1
gnu: r-bookdown: Update to 0.12.
* gnu/packages/cran.scm (r-bookdown): Update to 0.12.
2019-08-06 15:48:58 +02:00
Ricardo Wurmus 1a88de187b
gnu: r-ldheatmap: Update to 0.99-7.
* gnu/packages/cran.scm (r-ldheatmap): Update to 0.99-7.
[propagated-inputs]: Add r-rcpp.
2019-08-06 15:48:58 +02:00
Ricardo Wurmus 2deb1529a2
gnu: r-sf: Update to 0.7-7.
* gnu/packages/cran.scm (r-sf): Update to 0.7-7.
2019-08-06 15:48:58 +02:00
Ricardo Wurmus 4eed03ea41
gnu: r-deldir: Update to 0.1-23.
* gnu/packages/cran.scm (r-deldir): Update to 0.1-23.
2019-08-06 15:48:58 +02:00
Ricardo Wurmus 24d439868b
gnu: r-classint: Update to 0.4-1.
* gnu/packages/cran.scm (r-classint): Update to 0.4-1.
2019-08-06 15:48:58 +02:00
Ricardo Wurmus 8518744ec4
gnu: r-rematch2: Update to 2.1.0.
* gnu/packages/cran.scm (r-rematch2): Update to 2.1.0.
2019-08-06 15:48:58 +02:00
Ricardo Wurmus bd00835630
gnu: r-irkernel: Update to 1.0.2.
* gnu/packages/cran.scm (r-irkernel): Update to 1.0.2.
2019-08-06 15:48:58 +02:00
Ricardo Wurmus 51c9504ba6
gnu: r-lavaan: Update to 0.6-4.
* gnu/packages/cran.scm (r-lavaan): Update to 0.6-4.
2019-08-06 15:48:58 +02:00
Ricardo Wurmus 01629c665b
gnu: r-bayesm: Update to 3.1-3.
* gnu/packages/cran.scm (r-bayesm): Update to 3.1-3.
2019-08-06 15:48:57 +02:00
Ricardo Wurmus eebd93eb6b
gnu: r-rsvd: Update to 1.0.2.
* gnu/packages/cran.scm (r-rsvd): Update to 1.0.2.
2019-08-06 15:48:57 +02:00
Ricardo Wurmus d5d631b650
gnu: r-future: Update to 1.14.0.
* gnu/packages/cran.scm (r-future): Update to 1.14.0.
2019-08-06 15:48:57 +02:00
Ricardo Wurmus ffb97e695c
gnu: r-spatialextremes: Update to 2.0-7.2.
* gnu/packages/cran.scm (r-spatialextremes): Update to 2.0-7.2.
2019-08-06 15:48:57 +02:00
Ricardo Wurmus 504a51369f
gnu: r-bigrquery: Update to 1.2.0.
* gnu/packages/cran.scm (r-bigrquery): Update to 1.2.0.
[propagated-inputs]: Add r-gargle and r-rlang.
2019-08-06 15:48:57 +02:00
Ricardo Wurmus 6275418b6f
gnu: Add r-gargle.
* gnu/packages/cran.scm (r-gargle): New variable.
2019-08-06 15:48:57 +02:00
Ricardo Wurmus 031afc4890
gnu: r-shades: Update to 1.4.0.
* gnu/packages/cran.scm (r-shades): Update to 1.4.0.
2019-08-06 15:48:57 +02:00
Ricardo Wurmus 12618b5080
gnu: r-rnifti: Update to 0.11.1.
* gnu/packages/cran.scm (r-rnifti): Update to 0.11.1.
2019-08-06 15:48:57 +02:00
Ricardo Wurmus b154b02620
gnu: r-flare: Update to 1.6.0.2.
* gnu/packages/cran.scm (r-flare): Update to 1.6.0.2.
2019-08-06 15:48:57 +02:00
Ricardo Wurmus e0f20dce62
gnu: r-sparsesvd: Update to 0.2.
* gnu/packages/cran.scm (r-sparsesvd): Update to 0.2.
2019-08-06 15:48:57 +02:00
Ricardo Wurmus 14148ef1ee
gnu: r-tidytree: Update to 0.2.5.
* gnu/packages/cran.scm (r-tidytree): Update to 0.2.5.
2019-08-06 15:48:56 +02:00
Ricardo Wurmus ef93e90fae
gnu: r-rgl: Update to 0.100.26.
* gnu/packages/cran.scm (r-rgl): Update to 0.100.26.
2019-08-06 15:48:56 +02:00
Ricardo Wurmus 65555b1d08
gnu: r-afex: Update to 0.24-1.
* gnu/packages/cran.scm (r-afex): Update to 0.24-1.
2019-08-06 15:48:56 +02:00
Ricardo Wurmus 99765abb13
gnu: r-usethis: Update to 1.5.1.
* gnu/packages/cran.scm (r-usethis): Update to 1.5.1.
2019-08-06 15:48:56 +02:00
Ricardo Wurmus a5a64814b2
gnu: r-sjplot: Update to 2.7.0.
* gnu/packages/cran.scm (r-sjplot): Update to 2.7.0.
[propagated-inputs]: Add r-ggrepel.
2019-08-06 15:48:56 +02:00
Ricardo Wurmus 7343fa8ecb
gnu: r-ggeffects: Update to 0.11.0.
* gnu/packages/cran.scm (r-ggeffects): Update to 0.11.0.
2019-08-06 15:48:56 +02:00
Ricardo Wurmus 5ae4cbb656
gnu: r-performance: Update to 0.3.0.
* gnu/packages/cran.scm (r-performance): Update to 0.3.0.
2019-08-06 15:48:56 +02:00
Ricardo Wurmus 5357c59bf3
gnu: r-emmeans: Update to 1.4.
* gnu/packages/cran.scm (r-emmeans): Update to 1.4.
2019-08-06 15:48:56 +02:00
Ricardo Wurmus 332c8df6f0
gnu: r-magick: Update to 2.1.
* gnu/packages/cran.scm (r-magick): Update to 2.1.
2019-08-06 15:48:55 +02:00
Ricardo Wurmus 2634febacd
gnu: r-raster: Update to 2.9-23.
* gnu/packages/cran.scm (r-raster): Update to 2.9-23.
2019-08-06 15:48:55 +02:00
Ricardo Wurmus a510dc6091
gnu: r-proc: Update to 1.15.3.
* gnu/packages/cran.scm (r-proc): Update to 1.15.3.
2019-08-06 15:48:55 +02:00
Ricardo Wurmus 44de742e37
gnu: r-insight: Update to 0.4.1.
* gnu/packages/cran.scm (r-insight): Update to 0.4.1.
2019-08-06 15:48:55 +02:00
Ricardo Wurmus 72c967e2ea
gnu: r-abn: Update to 2.1.
* gnu/packages/cran.scm (r-abn): Update to 2.1.
[propagated-inputs]: Remove r-cairo.
2019-08-06 15:48:55 +02:00
Ricardo Wurmus c187e8f65d
gnu: r-factominer: Update to 1.42.
* gnu/packages/cran.scm (r-factominer): Update to 1.42.
2019-08-06 15:48:55 +02:00
Ricardo Wurmus 2d363778d4
gnu: r-reticulate: Update to 1.13.
* gnu/packages/cran.scm (r-reticulate): Update to 1.13.
2019-08-06 15:48:55 +02:00
Ricardo Wurmus e3abc134e8
gnu: r-dosnow: Update to 1.0.18.
* gnu/packages/cran.scm (r-dosnow): Update to 1.0.18.
2019-08-06 15:48:55 +02:00
Ricardo Wurmus cc7176cc2c
gnu: r-zip: Update to 2.0.3.
* gnu/packages/cran.scm (r-zip): Update to 2.0.3.
2019-08-06 15:48:55 +02:00
Ricardo Wurmus 9c69d79744
gnu: r-radiant-data: Update to 1.0.0.
* gnu/packages/cran.scm (r-radiant-data): Update to 1.0.0.
2019-08-06 15:48:54 +02:00
Ricardo Wurmus dbd3950a3f
gnu: r-shinyace: Update to 0.4.0.
* gnu/packages/cran.scm (r-shinyace): Update to 0.4.0.
2019-08-06 15:48:54 +02:00
Ricardo Wurmus 9f8f2d9b14
gnu: r-pillar: Update to 1.4.2.
* gnu/packages/cran.scm (r-pillar): Update to 1.4.2.
2019-08-06 15:48:54 +02:00
Ricardo Wurmus 56444d1852
gnu: r-vctrs: Update to 0.2.0.
* gnu/packages/cran.scm (r-vctrs): Update to 0.2.0.
[propagated-inputs]: Add r-ellipsis.
2019-08-06 15:48:54 +02:00
Ricardo Wurmus 503d5b5a75
gnu: r-processx: Update to 3.4.1.
* gnu/packages/cran.scm (r-processx): Update to 3.4.1.
2019-08-06 15:48:54 +02:00
Ricardo Wurmus 70980197aa
gnu: r-vioplot: Update to 0.3.2.
* gnu/packages/cran.scm (r-vioplot): Update to 0.3.2.
2019-08-06 15:48:54 +02:00
Ricardo Wurmus 83e3e72a30
gnu: r-hardyweinberg: Update to 1.6.3.
* gnu/packages/cran.scm (r-hardyweinberg): Update to 1.6.3.
2019-08-06 15:48:54 +02:00
Ricardo Wurmus 04d42a9de1
gnu: r-mice: Update to 3.6.0.
* gnu/packages/cran.scm (r-mice): Update to 3.6.0.
2019-08-06 15:48:54 +02:00
Ricardo Wurmus bed3424619
gnu: r-jomo: Update to 2.6-9.
* gnu/packages/cran.scm (r-jomo): Update to 2.6-9.
2019-08-06 15:48:54 +02:00
Ricardo Wurmus 417f7ed58d
gnu: r-recipes: Update to 0.1.6.
* gnu/packages/cran.scm (r-recipes): Update to 0.1.6.
[propagated-inputs]: Remove r-rcpproll.
2019-08-06 15:48:54 +02:00
Ricardo Wurmus a80620b96d
gnu: r-geometry: Update to 0.4.2.
* gnu/packages/cran.scm (r-geometry): Update to 0.4.2.
[propagated-inputs]: Add r-linprog.
2019-08-06 15:48:54 +02:00
Ricardo Wurmus f3640cee10
gnu: Add r-linprog.
* gnu/packages/cran.scm (r-linprog): New variable.
2019-08-06 15:48:53 +02:00
Ricardo Wurmus 099b7c55bb
gnu: r-lava: Update to 1.6.6.
* gnu/packages/cran.scm (r-lava): Update to 1.6.6.
2019-08-06 15:48:53 +02:00
Ricardo Wurmus 3337fd1dce
gnu: r-energy: Update to 1.7-6.
* gnu/packages/cran.scm (r-energy): Update to 1.7-6.
2019-08-06 15:48:53 +02:00
Ricardo Wurmus 80cdd36fe8
gnu: r-lpsolve: Update to 5.6.13.2.
* gnu/packages/cran.scm (r-lpsolve): Update to 5.6.13.2.
2019-08-06 15:48:53 +02:00
Ricardo Wurmus 4522ec869b
gnu: r-rcpp: Update to 1.0.2.
* gnu/packages/cran.scm (r-rcpp): Update to 1.0.2.
2019-08-06 15:48:53 +02:00
Ricardo Wurmus cd7e9fb161
gnu: r-pkgbuild: Update to 1.0.4.
* gnu/packages/cran.scm (r-pkgbuild): Update to 1.0.4.
2019-08-06 15:48:53 +02:00
Ricardo Wurmus b89805fe14
gnu: r-haven: Update to 2.1.1.
* gnu/packages/cran.scm (r-haven): Update to 2.1.1.
2019-08-06 15:48:53 +02:00
Ricardo Wurmus b44c12057b
gnu: r-curl: Update to 4.0.
* gnu/packages/cran.scm (r-curl): Update to 4.0.
2019-08-06 15:48:53 +02:00
Ricardo Wurmus 3e0128ec36
gnu: r-callr: Update to 3.3.1.
* gnu/packages/cran.scm (r-callr): Update to 3.3.1.
2019-08-06 15:48:53 +02:00
Ricardo Wurmus 6a04f25faf
gnu: r-ellipsis: Update to 0.2.0.1.
* gnu/packages/cran.scm (r-ellipsis): Update to 0.2.0.1.
2019-08-06 15:48:53 +02:00
Ricardo Wurmus 710ecc9ceb
gnu: r-clipr: Update to 0.7.0.
* gnu/packages/cran.scm (r-clipr): Update to 0.7.0.
2019-08-06 15:48:53 +02:00
Ricardo Wurmus d36430d274
gnu: r-desolve: Update to 1.24.
* gnu/packages/maths.scm (r-desolve): Update to 1.24.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 17e43c425d
gnu: r-quantreg: Update to 5.42.1.
* gnu/packages/statistics.scm (r-quantreg): Update to 5.42.1.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 599fbee5fb
gnu: r-pbapply: Update to 1.4-1.
* gnu/packages/statistics.scm (r-pbapply): Update to 1.4-1.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 0910ff0cfc
gnu: r-robust: Update to 0.4-18.1.
* gnu/packages/statistics.scm (r-robust): Update to 0.4-18.1.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus ddfd0afb2a
gnu: r-mclust: Update to 5.4.5.
* gnu/packages/statistics.scm (r-mclust): Update to 5.4.5.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 58aa971fbd
gnu: r-fastica: Update to 1.2-2.
* gnu/packages/statistics.scm (r-fastica): Update to 1.2-2.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus db93ef0948
gnu: r-cowplot: Update to 1.0.0.
* gnu/packages/statistics.scm (r-cowplot): Update to 1.0.0.
[propagated-inputs]: Remove r-plyr; add r-rlang.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus b2fea05954
gnu: r-rngtools: Update to 1.4.
* gnu/packages/statistics.scm (r-rngtools): Update to 1.4.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 8d84a0ad70
gnu: r-domc: Update to 1.3.6.
* gnu/packages/statistics.scm (r-domc): Update to 1.3.6.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 862959813f
gnu: r-doparallel: Update to 1.0.15.
* gnu/packages/statistics.scm (r-doparallel): Update to 1.0.15.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 5a01128f45
gnu: r-foreach: Update to 1.4.7.
* gnu/packages/statistics.scm (r-foreach): Update to 1.4.7.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus b41d03dd35
gnu: r-iterators: Update to 1.0.12.
* gnu/packages/statistics.scm (r-iterators): Update to 1.0.12.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 90752043dd
gnu: r-rsqlite: Update to 2.1.2.
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.1.2.
2019-08-06 15:48:52 +02:00
Ricardo Wurmus 2de0f885f4
gnu: r-blob: Update to 1.2.0.
* gnu/packages/statistics.scm (r-blob): Update to 1.2.0.
[propagated-inputs]: Add r-rlang and r-vctrs; remove r-tibble.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus feb261ee9b
gnu: r-rmarkdown: Update to 1.14.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.14.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 6af62ad50a
gnu: r-rcpparmadillo: Update to 0.9.600.4.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.600.4.0.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 9b02d1c836
gnu: r-hms: Update to 0.5.0.
* gnu/packages/statistics.scm (r-hms): Update to 0.5.0.
[propagated-inputs]: Add r-vctrs.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 78896ba23b
gnu: r-devtools: Update to 2.1.0.
* gnu/packages/statistics.scm (r-devtools): Update to 2.1.0.
[propagated-inputs]: Add r-roxygen2 and r-testthat.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 1df87085e3
gnu: r-git2r: Update to 0.26.1.
* gnu/packages/statistics.scm (r-git2r): Update to 0.26.1.
[inputs]: Remove libssh2 and openssl; add libgit2.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 9236b2c144
gnu: r-httr: Update to 1.4.1.
* gnu/packages/statistics.scm (r-httr): Update to 1.4.1.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 3511aff992
gnu: r-openssl: Update to 1.4.1.
* gnu/packages/statistics.scm (r-openssl): Update to 1.4.1.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus c02bb7e901
gnu: r-checkmate: Update to 1.9.4.
* gnu/packages/statistics.scm (r-checkmate): Update to 1.9.4.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus b29ecb8e37
gnu: r-xml2: Update to 1.2.1.
* gnu/packages/statistics.scm (r-xml2): Update to 1.2.1.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 8d932e71d6
gnu: r-coda: Update to 0.19-3.
* gnu/packages/statistics.scm (r-coda): Update to 0.19-3.
2019-08-06 15:48:51 +02:00
Ricardo Wurmus 7d36001bd2
gnu: r-dplyr: Update to 0.8.3.
* gnu/packages/statistics.scm (r-dplyr): Update to 0.8.3.
2019-08-06 15:48:50 +02:00
Ricardo Wurmus eae8e56a64
gnu: r-testthat: Update to 2.2.1.
* gnu/packages/statistics.scm (r-testthat): Update to 2.2.1.
[propagated-inputs]: Add r-evaluate.
2019-08-06 15:48:50 +02:00
Ricardo Wurmus c2e85d0265
gnu: r-digest: Update to 0.6.20.
* gnu/packages/statistics.scm (r-digest): Update to 0.6.20.
2019-08-06 15:48:50 +02:00
Ricardo Wurmus d6e54e7002
gnu: r-nlme: Update to 3.1-141.
* gnu/packages/statistics.scm (r-nlme): Update to 3.1-141.
2019-08-06 15:48:50 +02:00
Ricardo Wurmus ecebfe51ce
gnu: r-foreign: Update to 0.8-72.
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-72.
2019-08-06 15:48:50 +02:00
Ricardo Wurmus 6eccb0879f
gnu: r-boot: Update to 1.3-23.
* gnu/packages/statistics.scm (r-boot): Update to 1.3-23.
2019-08-06 15:48:50 +02:00
Rutger Helling 49fd98bf65
gnu: faudio: Update to 19.08.
* gnu/packages/audio.scm (faudio): Update to 19.08.
2019-08-06 13:09:23 +02:00
Rutger Helling 932f795c0e
gnu: kitty: Update to 0.14.3.
* gnu/packages/terminals.scm (kitty): Update to 0.14.3.
[inputs]: Add libcanberra.
2019-08-06 13:06:25 +02:00
Ricardo Wurmus 378d94e51b
Merge remote-tracking branch 'origin/master' into wip-texlive 2019-08-06 10:07:36 +02:00
Brian Leung 6a5198170e
gnu: emacs-ivy: Update to 0.12.0-1.d3e4514.
* gnu/packages/emacs-xyz.scm (emacs-ivy): Update to 0.12.0-1.d3e4514.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-06 09:41:44 +02:00
Mark H Weaver aac6c53a7b
gnu: libmad: Add more security fixes from Debian.
Includes fixes for CVE-2017-8372, CVE-2017-8373, and CVE-2017-8374.

Reported by <marit@secmail.pro> in <https://bugs.gnu.org/36909>.

* gnu/packages/patches/libmad-frame-length.patch: Delete file.
* gnu/packages/patches/libmad-length-check.patch,
gnu/packages/patches/libmad-md_size.patch: New files.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/mp3.scm (libmad)[source]: Update patches accordingly.
2019-08-06 03:18:24 -04:00
Rutger Helling b0c48829b6
gnu: flatpak: Update to 1.4.2.
* gnu/packages/package-management.scm (flatpak): Update to 1.4.2.
2019-08-06 08:25:35 +02:00
Marius Bakke 2426e2c94c
gnu: strace: Fix test failures on some systems.
* gnu/packages/patches/strace-ipc-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/linux.scm (strace)[source](patches): New field.
[arguments]: Add 'regenerate-tests' phase.

Co-Authored-By: Mark H Weaver <mhw@netris.org>
2019-08-06 02:17:38 -04:00
Tobias Geerinckx-Rice 96681d4be1
gnu: terminator: Wrap instead of propagating GSettings schemas.
* gnu/packages/gnome.scm (terminator)[inputs]:
Move gsettings-desktop-schemas back here…
[propagated-inputs]: …from here.
[arguments]: Add the glib-or-gtk-build-system's ‘glib-or-gtk-wrap’
phase.
2019-08-05 22:18:57 +02:00
Tobias Geerinckx-Rice 7b88b71120
gnu: libvirt: Update to 5.6.0.
* gnu/packages/virtualization.scm (libvirt): Update to 5.6.0.
[source]: Remove patch.
* gnu/packages/patches/libvirt-remove-ATTRIBUTE_UNUSED.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2019-08-05 21:03:31 +02:00
Tobias Geerinckx-Rice d866acca9a
gnu: python-libvirt: Update to 5.6.0.
* gnu/packages/virtualization.scm (python-libvirt): Update to 5.6.0.
2019-08-05 21:03:31 +02:00
Mark H Weaver 0fae1b6dee
Revert "gnu: nss: Update to 3.45 [security fixes]."
This reverts commit 95580bda05.

Note that the security fixes mentioned in that commit were already
present in NSS 3.44.1, which is the version that's now reinstated
by this revert.  The rationale for this revert is that NSS 3.45 fails
to build on armhf-linux.
2019-08-05 12:45:22 -04:00
Rutger Helling c94884bcc1
gnu: wine: Adapt Intel Vulkan on i686-linux.
* gnu/packages/wine.scm (wine)[arguments]: Adjust to also provide Vulkan on
i686-linux for Intel.
* gnu/packages/wine.scm (wine64)[arguments]: Adjust to also provide Vulkan on
i686-linux for Intel.
* gnu/packages/wine.scm (wine-staging)[arguments]: Adjust to also provide
Vulkan on i686-linux for Intel.
* gnu/packages/wine.scm (wine64-staging)[arguments]: Adjust to also provide
Vulkan on i686-linux for Intel.
2019-08-05 16:47:36 +02:00
Brian Leung e15ec8bcec
gnu: emacs-org-super-agenda: Update to 1.1.1-1.375bde4.
* gnu/packages/emacs-xyz.scm (emacs-org-super-agenda): Update to
1.1.1-1.375bde4.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:19:03 +02:00
Brian Leung 4d48e277ca
gnu: Add emacs-org-sidebar.
* gnu/packages/emacs-xyz.scm (emacs-org-sidebar): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:17:46 +02:00
Brian Leung 003d153783
gnu: emacs-dired-hacks: Update to 0.0.1-2.886befe.
* gnu/packages/emacs-xyz.scm (emacs-dired-hacks): Update to 0.0.1-2.886befe.
[description]: Use full sentences.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:16:59 +02:00
Brian Leung f94ae7d472
gnu: Add emacs-nswbuff.
* gnu/packages/emacs-xyz.scm (emacs-nswbuff): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:15:44 +02:00
Brian Leung 12dd1a4838
gnu: Add emacs-company-math.
* gnu/packages/emacs-xyz.scm (emacs-company-math): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:15:00 +02:00
Brian Leung 16fdde79ec
gnu: Add emacs-math-symbol-lists.
* gnu/packages/emacs-xyz.scm (emacs-math-symbol-lists): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:13:58 +02:00
Brian Leung c07f3113d9
gnu: Add emacs-hercules.
* gnu/packages/emacs-xyz.scm (emacs-hercules): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:12:59 +02:00
Brian Leung d052e51b57
gnu: Add emacs-mc-extras.
* gnu/packages/emacs-xyz.scm (emacs-mc-extras): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:12:09 +02:00
Brian Leung 594d60a3f4
gnu: emacs-nodejs-repl: Update to 0.2.2.
* gnu/packages/emacs-xyz.scm (emacs-nodejs-repl): Update to 0.2.2.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:09:52 +02:00
Brian Leung 365e94c019
gnu: emacs-counsel-etags: Update to 1.8.7.
* gnu/packages/emacs-xyz.scm (emacs-counsel-etags): Update to 1.8.7.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:09:37 +02:00
Brian Leung 10989c59cb
gnu: emacs-lua-mode: Update to 20151025-2.95c64bb.
* gnu/packages/emacs-xyz.scm (emacs-lua-mode): Update to 20151025-2.95c64bb.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:08:30 +02:00
Brian Leung f48aa64ea8
gnu: emacs-evil-expat: Update to 0.0.1-1.f4fcd0a.
* gnu/packages/emacs-xyz.scm (emacs-evil-expat): Update to 0.0.1-1.f4fcd0a.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:07:09 +02:00
Brian Leung fef08850b7
gnu: emacs-so-long: Update to 1.0-2.cfae473.
* gnu/packages/emacs-xyz.scm (emacs-so-long): Update to 1.0-2.cfae473.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:05:26 +02:00
Brian Leung aca6091b05
gnu: emacs-highlight-indentation: Update to 0.7.0-1.d03803f.
* gnu/packages/emacs-xyz.scm (emacs-highlight-indentation): Update to
0.7.0-1.d03803f.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:04:27 +02:00
Brian Leung 76c2e51017
gnu: Add emacs-dired-toggle-sudo.
* gnu/packages/emacs-xyz.scm (emacs-dired-toggle-sudo): New variable.
* gnu/packages/patches/emacs-dired-toggle-sudo-emacs-26.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 16:02:05 +02:00
Brian Leung 1a24d8b347
gnu: Add emacs-helm-org-rifle.
* gnu/packages/emacs-xyz.scm (emacs-helm-org-rifle): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 15:47:00 +02:00
Brian Leung 1239146613
gnu: emacs-magit-todos: Update to 1.3.
* gnu/packages/emacs-xyz.scm (emacs-magit-todos): Update to 1.3.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 15:45:54 +02:00
Brian Leung 0074b1e96c
gnu: Add emacs-scroll-on-drag.
* gnu/packages/emacs-xyz.scm (emacs-scroll-on-drag): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 15:45:24 +02:00
Brian Leung 91b351de53
gnu: Add emacs-evil-traces.
* gnu/packages/emacs-xyz.scm (emacs-evil-traces): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 15:43:05 +02:00
Brian Leung 7fb91e4f36
gnu: emacs-helm: Update to 3.3.
* gnu/packages/emacs-xyz.scm (emacs-helm): Update to 3.3.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 15:40:37 +02:00
Jonathan Frederickson 213315d485
gnu: Add libhandy.
* gnu/packages/gnome.scm (libhandy): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-08-05 14:06:11 +02:00
Nicolas Goaziou b705b1388f
gnu: emacs-org-contrib: Update to 20190805.
* gnu/packages/emacs-xyz.scm (emacs-org-contrib): Update to 20190805.
2019-08-05 13:07:56 +02:00
Nicolas Goaziou dedafb9ccf
gnu: emacs-org: Update to 9.2.5.
* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.2.5.
2019-08-05 13:03:17 +02:00
Brian Leung 71804546b1
gnu: python-scikit-learn: Make gzip timestamps writable.
* gnu/packages/machine-learning.scm (python-scikit-learn)
[arguments]: Add custom phase to make gzip timestamps writable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-08-05 10:23:02 +03:00
Brian Leung d9340de903
gnu: khmer: Make gzip timestamps writable.
* gnu/packages/bioinformatics.scm (khmer)[arguments]: Add custom phase
to make gzip timestamps writable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-08-05 10:22:20 +03:00
Rutger Helling 3f14c9135b
gnu: mesa: Enable Intel 32-bit Vulkan drivers.
* gnu/packages/gl.scm (mesa)[arguments]: Also build Vulkan drivers for Intel
on i686-linux.
2019-08-05 08:25:04 +02:00
Mark H Weaver 5ee4d11ff4
gnu: linux-libre: Update to 5.2.6.
* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.6.
(linux-libre-5.2-pristine-source)[hash]: Update hash.
2019-08-04 22:02:02 -04:00
Mark H Weaver b4478eb2e3
gnu: linux-libre@4.19: Update to 4.19.64.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.64.
(linux-libre-4.19-pristine-source)[hash]: Update hash.
2019-08-04 22:01:59 -04:00
Mark H Weaver cf1941712f
gnu: linux-libre@4.14: Update to 4.14.136.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.136.
(linux-libre-4.14-pristine-source)[hash]: Update hash.
2019-08-04 22:01:57 -04:00
Mark H Weaver 8079493c6c
gnu: linux-libre@4.9: Update to 4.9.187.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.187.
(linux-libre-4.9-pristine-source)[hash]: Update hash.
2019-08-04 22:01:55 -04:00
Mark H Weaver 71f9016a4f
gnu: linux-libre@4.4: Update to 4.4.187.
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.187.
(linux-libre-4.4-pristine-source)[hash]: Update hash.
2019-08-04 22:01:52 -04:00
Mark H Weaver 95580bda05
gnu: nss: Update to 3.45 [security fixes].
Includes fixes for CVE-2019-11719, CVE-2019-11727, and CVE-2019-11729.

* gnu/packages/nss.scm (nss): Update to 3.45.
2019-08-04 21:59:38 -04:00
Tobias Geerinckx-Rice 35600cd9a0
gnu: docker-compose: Remove inputs for old Python versions.
* gnu/packages/docker.scm (docker-compose)[inputs]:
Remove python2-backport-ssl-match-hostname and python-ipaddress.
2019-08-05 01:06:58 +02:00
Tobias Geerinckx-Rice d12578f2e2
gnu: python-docker-py: Propagate dependencies.
* gnu/packages/docker.scm (python-docker-py)[inputs]:
Move python-docker-pycreds and python-paramiko from here…
[propagated-inputs]: …to here.
(docker-compose)[inputs]: Remove them.
2019-08-05 01:06:58 +02:00
Tobias Geerinckx-Rice e643d90f0f
gnu: docker-compose: Remove Windows-specific input.
* gnu/packages/docker.scm (docker-compose)[inputs]:
Remove python-colorama.
2019-08-05 01:06:57 +02:00
Marius Bakke 5b689de58d
gnu: x265: Update to 3.1.2.
* gnu/packages/video.scm (x265): Update to 3.1.2.
2019-08-05 00:17:09 +02:00
Marius Bakke 621ce95cfe
gnu: x265: Update source URI.
* gnu/packages/video.scm (x265)[source](uri): Add the canonical upstream at
<https://bitbucket.org/multicoreware/x265>.
2019-08-05 00:17:09 +02:00
Marius Bakke 15b5963300
gnu: i3-wm: Update to 4.17.
* gnu/packages/wm.scm (i3-wm): Update to 4.17.
2019-08-04 17:39:04 +02:00
Marius Bakke cb96d239e6
gnu: i3status: Update to 2.13.
* gnu/packages/wm.scm (i3status): Update to 2.13.
[arguments]: Remove #:make-flags and #:phases.  Add #:out-of-source?.
[native-inputs]: Add DOCBOOK-XSL, LIBXML2 and XMLTO.
2019-08-04 17:38:13 +02:00
Marius Bakke 4f868257f3
gnu: samba: Update to 4.10.6.
* gnu/packages/samba.scm (samba): Update to 4.10.6.
2019-08-04 16:22:35 +02:00
Marius Bakke 2e2db09280
gnu: strace: Update to 5.2.
* gnu/packages/linux.scm (strace): Update to 5.2.
2019-08-04 16:22:20 +02:00
Marius Bakke 16feaeefc9
gnu: libevent: Update to 2.1.11.
* gnu/packages/libevent.scm (libevent): Update to 2.1.11.
2019-08-04 16:22:01 +02:00
Marius Bakke febbe43155
gnu: exiv2: Update to 0.27.2.
* gnu/packages/image.scm (exiv2): Update to 0.27.2.
2019-08-04 16:21:43 +02:00
Marius Bakke 9728def2e9
gnu: enchant: Update to 2.2.5.
* gnu/packages/enchant.scm (enchant): Update to 2.2.5.
2019-08-04 16:21:26 +02:00
Marius Bakke 6bf53ad58d
gnu: python-mako: Update to 1.1.0.
* gnu/packages/python-xyz.scm (python-mako): Update to 1.1.0.
[arguments]: New field.
[native-inputs]: Remove PYTHON-NOSE.
2019-08-04 14:02:48 +02:00
Marius Bakke 4668464f29
gnu: flac: Update to 1.3.3.
* gnu/packages/xiph.scm (flac): Update to 1.3.3.
[source](patches): Remove.
* gnu/packages/patches/flac-CVE-2017-6888.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2019-08-04 13:57:53 +02:00
Marius Bakke 3082280cf9
gnu: libpciaccess: Update to 0.16.
* gnu/packages/xorg.scm (libpciaccess): Update to 0.16.
2019-08-04 13:49:57 +02:00
Marius Bakke 8ed97b6ea1
gnu: nss, nss-certs: Update to 3.45.
* gnu/packages/certs.scm (nss-certs): Update to 3.45.
* gnu/packages/nss.scm (nss): Likewise.
2019-08-04 13:49:57 +02:00
Marius Bakke cb16a9fba9
gnu: python-packaging: Update to 19.1.
* gnu/packages/python-xyz.scm (python-packaging): Update to 19.1.
2019-08-04 13:49:56 +02:00
Marius Bakke ec227df31a
gnu: perl-cgi: Update to 4.44.
* gnu/packages/web.scm (perl-cgi): Update to 4.44.
2019-08-04 13:49:56 +02:00
Marius Bakke ff292a77a9
gnu: perl-http-message: Update to 6.18.
* gnu/packages/web.scm (perl-http-message): Update to 6.18.
2019-08-04 13:49:56 +02:00
Marius Bakke 81e74dc80b
gnu: libva: Update to 2.5.0.
* gnu/packages/video.scm (libva): Update to 2.5.0.
2019-08-04 13:49:56 +02:00
Marius Bakke 1648530f4a
gnu: gtk+: Update to 3.24.10.
* gnu/packages/gtk.scm (gtk+): Update to 3.24.10.
2019-08-04 13:49:56 +02:00
Marius Bakke 140716a5c9
gnu: cups-filters: Update to 1.25.1.
* gnu/packages/cups.scm (cups-filters): Update to 1.25.1.
2019-08-04 13:49:56 +02:00
Marius Bakke 6d9de48d15
gnu: subversion: Update to 1.10.6 [fixes CVE-2018-11782, CVE-2019-0203].
* gnu/packages/version-control.scm (subversion): Update to 1.10.6.
2019-08-04 13:49:56 +02:00
Marius Bakke cc3c5fc5e1
gnu: mariadb: Update to 10.1.41 [security fixes].
This fixes CVE-2019-2805, CVE-2019-2740, CVE-2019-2739, and CVE-2019-2737.

* gnu/packages/databases.scm (mariadb): Update to 10.1.41.
[source](uri): Update download URL.
2019-08-04 13:49:56 +02:00
Marius Bakke 4661fa76c7
gnu: python-mako: Update to 1.0.14.
* gnu/packages/python-xyz.scm (python-mako): Update to 1.0.14.
2019-08-04 13:49:55 +02:00
Marius Bakke 756a980953
gnu: python-cython: Update to 0.29.13.
* gnu/packages/python-xyz.scm (python-cython): Update to 0.29.13.
2019-08-04 13:49:55 +02:00
Marius Bakke c0e40f4fd2
gnu: ImageMagick: Update to 6.9.10-58.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.10-58.
2019-08-04 13:49:55 +02:00
Marius Bakke 7aad68f6d9
gnu: libwebp: Update to 1.0.3.
* gnu/packages/image.scm (libwebp): Update to 1.0.3.
2019-08-04 13:49:55 +02:00
Marius Bakke f184893af0
gnu: MariaDB: Disable the TokuDB plugin.
Fixes <https://bugs.gnu.org/35521>.
Reported by Mark H Weaver <mhw@netris.org>.

* gnu/packages/databases.scm (mariadb)[arguments]: Pass "-DTOKUDB_OK" in
<#:configure-flags>.  Enable the "innodb_fts.crash_recovery" test, which
likely failed because of the high I/O load induced by TokuDB.
[inputs]: Remove SNAPPY.

(cherry picked from commit bba7a77ed9)
2019-08-04 13:49:55 +02:00
Marius Bakke 275cce3d87
gnu: python-cython: Speed up test suite.
* gnu/packages/python-xyz.scm (python-cython)[arguments]: In the CHECK phase,
disable compiler optimizations and enable (some) parallel tests.

(cherry picked from commit e9194eb048)
2019-08-04 13:49:55 +02:00
Marius Bakke 18090a9735
gnu: perl-try-tiny: Update to 0.30.
* gnu/packages/perl.scm (perl-try-tiny): Update to 0.30.
2019-08-04 13:49:55 +02:00
Marius Bakke 1c7d7f3f65
gnu: double-conversion: Update to 3.1.5.
* gnu/packages/maths.scm (double-conversion): Update to 3.1.5.
2019-08-04 13:49:54 +02:00
Marius Bakke a33925d122
gnu: Remove pcre2/fixed.
* gnu/packages/pcre.scm (pcre2/fixed): Remove variable.
(pcre2)[replacement]: Remove.
[source](patches): New field.
* gnu/packages/php.scm (php)[inputs]: Change PCRE2/FIXED to PCRE2.
2019-08-04 13:49:45 +02:00
Marius Bakke f35d313265
Merge branch 'master' into staging 2019-08-04 13:41:27 +02:00
Marius Bakke e920037793
gnu: docker-cli: Print a usable version string.
* gnu/packages/docker.scm (docker-cli)[arguments]<#:phases>: Set the VERSION
variable before building the package.
2019-08-04 13:33:42 +02:00
Marius Bakke 7f2e852267
gnu: ungoogled-chromium: Update to 76.0.3809.87-0.6ea9390.
* gnu/packages/chromium.scm (%preserved-third-party-files): Adjust for 76.
(%chromium-version): Set to 76.0.3809.87.
(%ungoogled-revision): Set to 6ea939002bae43a27910e03569d43519d07842e7.
(%debian-revision): Set to debian/76.0.3809.87-2.
(%chromium-origin, %ungoogled-origin, %debian-origin): Update hashes.
(gentoo-patch, gentoo-patches): New procedures.
(%auxiliary-patches): New variable.
(ungoogled-chromium-source): Ignore Ungoogleds bundled Debian patches, as well
as some of Debians build fixes.  Apply %AUXILIARY-PATCHES.
(ungoogled-chromium)[arguments]: Adjust unbundling substitutions.  Do not set
Blink symbol level.
2019-08-04 13:33:42 +02:00
Marius Bakke f339cb188a
gnu: re2: Update to 2019-08-01.
* gnu/packages/regex.scm (re2): Update to 2019-08-01.
2019-08-04 13:33:42 +02:00
Tobias Geerinckx-Rice ded545d562
gnu: mpfi: Use @acronym{} in Texinfo.
* gnu/packages/multiprecision.scm (mpfi)[description]: Substitute
@acronym{} for @dfn{}.
2019-08-03 23:26:40 +02:00
Tobias Geerinckx-Rice aaf80ba781
gnu: mpc: Use @acronym{} in Texinfo.
* gnu/packages/multiprecision.scm (mpc)[description]: Substitute
@acronym{} for @dfn{}.
2019-08-03 23:26:40 +02:00
Tobias Geerinckx-Rice 932b607293
gnu: mpfr: Use @acronym{} in Texinfo.
* gnu/packages/multiprecision.scm (mpfr)[description]: Substitute
@acronym{} for @dfn{}.
2019-08-03 23:26:40 +02:00
Tobias Geerinckx-Rice 245fae9077
gnu: gmp: Use @acronym{} in Texinfo.
* gnu/packages/multiprecision.scm (gmp)[description]: Substitute
@acronym{} for @dfn{}.
2019-08-03 23:26:40 +02:00
Tobias Geerinckx-Rice f8f2b048b9
gnu: mtd-utils: Support cryptography.
* gnu/packages/linux.scm (mtd-utils)[inputs]: Add openssl.
2019-08-03 23:26:40 +02:00
Tobias Geerinckx-Rice 9ea820a5bf
gnu: mtd-utils: Update to 2.1.1.
* gnu/packages/linux.scm (mtd-utils): Update to 2.1.1.
[inputs]: Add zstd:lib.
2019-08-03 23:26:39 +02:00
Tobias Geerinckx-Rice b5e912a88c
gnu: man-pages: Update to 5.02.
* gnu/packages/man.scm (man-pages): Update to 5.02.
2019-08-03 17:41:29 +02:00
Alex Vong 144cb83a71
gnu: youtube-dl: Update to 2019.08.02.
* gnu/packages/video.scm (youtube-dl): Update to 2019.08.02.
2019-08-03 21:54:08 +08:00
David Thompson 2d0e802f1a
gnu: guile-next: Update to 2.9.3.
* gnu/packages/guile.scm (guile-next): Update to 2.9.3.
2019-08-03 08:14:20 -04:00
Rutger Helling 036feaf9cb
gnu: wine64-staging: Adapt patch script.
* gnu/packages/wine.scm (wine64-staging)[arguments]: Don't exclude certain
patches.
2019-08-03 10:50:58 +02:00
Rutger Helling 09fd82ce8c
gnu: wine-staging: Update to 4.13.
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 4.13.
* gnu/packages/wine.scm (wine-staging): Update to 4.13.
2019-08-03 10:33:23 +02:00
Tobias Geerinckx-Rice 82ebb785f1
gnu: you-get: Update to 0.4.1328.
* gnu/packages/video.scm (you-get): Update to 0.4.1328.
2019-08-03 01:13:47 +02:00
Tobias Geerinckx-Rice 095c09c773
gnu: krita: Update to 4.2.5.
* gnu/packages/kde.scm (krita): Update to 4.2.5.
2019-08-03 01:13:47 +02:00
Tobias Geerinckx-Rice ad9fd1ba2c
gnu: texmacs: Update to 1.99.11.
* gnu/packages/text-editors.scm (texmacs): Update to 1.99.11.
2019-08-03 01:13:47 +02:00
Pierre Neidhardt 000faac0a2
gnu: sbcl-trivia: Fix .asd loading.
* gnu/packages/lisp.scm (sbcl-trivia): Do it.
2019-08-02 17:45:37 +02:00
Pierre Neidhardt 6ba457cc1c
gnu: Add sbcl-cl-str.
* gnu/packages/lisp.scm (sbcl-cl-str): New variable.
2019-08-02 13:11:13 +02:00
Tobias Geerinckx-Rice 7c13793dbc
Revert "gnu: fontforge: Update to 20190801."
This is core-updates material.
This reverts commit 4bb1582c8a.
2019-08-02 08:42:14 +02:00
Tobias Geerinckx-Rice 3ab8c2242d
gnu: fontforge: Use top-level home page.
* gnu/packages/fontutils.scm (fontforge)[home-page]: Remove language code.
2019-08-02 08:00:07 +02:00
Tobias Geerinckx-Rice 4bb1582c8a
gnu: fontforge: Update to 20190801.
* gnu/packages/fontutils.scm (fontforge): Update to 20190801.
2019-08-02 08:00:07 +02:00
Tobias Geerinckx-Rice a17fe3f01a
gnu: Add missing pcre2-fix-jit_match-crash.patch.
* gnu/packages/patches/pcre2-fix-jit_match-crash.patch: Really new file.
2019-08-02 02:01:17 +02:00
Tobias Geerinckx-Rice 61919f0981
gnu: php: Update to 7.3.8.
* gnu/packages/php.scm (php): Update to 7.3.8.
[inputs]: Use pcre2/fixed.
2019-08-02 01:49:53 +02:00
Tobias Geerinckx-Rice 951fd8572a
gnu: pcre@2: Fix run-time crash [security fix].
* gnu/packages/pcre.scm (pcre2)[replacement]: New field.
(pcre2/fixed): New public variable.
* packages/patches/pcre2-fix-jit_match-crash.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-08-02 01:49:47 +02:00
Tobias Geerinckx-Rice 9b76aa1031
gnu: php: Don't use NAME in source URI.
* gnu/packages/php.scm (php)[source]: Hard-code NAME.
2019-08-02 01:49:24 +02:00
Nicolas Goaziou d9e3f9d9d7
gnu: giac: Update to 1.5.0-63.
* gnu/packages/algebra.scm (giac): Update to 1.5.0-63.
2019-08-02 00:08:08 +02:00
Nicolas Goaziou d623e98f0d
gnu: snap: Update to 5.0.8.
* gnu/packages/education.scm (snap): Update to 5.0.8.
2019-08-01 22:42:26 +02:00
Nicolas Goaziou 5d727935a8
gnu: silkaj: Update to 0.7.3.
* gnu/packages/finance.scm (silkaj): Update to 0.7.3.
2019-08-01 22:34:04 +02:00
Nicolas Goaziou a41cd13563
gnu: python-duniterpy: Update to 0.55.1.
* gnu/packages/finance.scm (python-duniterpy): Update to 0.55.1.
2019-08-01 22:24:34 +02:00
mjbecze@riseup.net 01b37d0f74
gnu: Add trezord.
* gnu/packages/finance.scm (trezord): New variable.

Signed-off-by: Julien Lepiller <julien@lepiller.eu>
2019-08-01 22:04:22 +02:00
Nicolas Goaziou 0ca3ee43b7
gnu: wireshark: Update to 3.0.3.
* gnu/packages/networking.scm (wireshark): Update to 3.0.3.
2019-08-01 17:30:11 +02:00
Tobias Geerinckx-Rice e7dfbae8a9
gnu: mksh: Update to 57.
* gnu/packages/shells.scm (mksh): Update to 57.
2019-08-01 07:04:27 +02:00
Tobias Geerinckx-Rice 3935507f0f
gnu: intel-vaapi-driver: Restrict supported systems.
As noted at <https://debbugs.gnu.org/36814> and then promptly forgotten.
This follows up on commit d8d7565b82.

* gnu/packages/video.scm (intel-vaapi-driver)[supported-systems]:
Build onl on Intel systems.
2019-08-01 05:43:33 +02:00
Tobias Geerinckx-Rice a094693de3
gnu: sane-backends: Build back ends that need JPEG support.
* gnu/packages/scanner.scm (sane-backends)[inputs]: Add libjpeg.
2019-08-01 05:43:33 +02:00
Tobias Geerinckx-Rice 7018f926d4
gnu: sane-backends-minimal: Update to 1.0.28.
* gnu/packages/scanner.scm (sane-backends-minimal): Update to 1.0.28.
[arguments]: Disable back end tests.
2019-08-01 05:34:56 +02:00
Mark H Weaver 6af4cb30d3
gnu: blender: Remove stale warning about it being an RC build.
This is a followup to commit 274ba54e53.

* gnu/packages/graphics.scm (blender)[description]: Remove warning.
2019-07-31 16:13:00 -04:00
Mark H Weaver ee825b5d0f
gnu: linux-libre: Update to 5.2.5.
* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.5.
(linux-libre-5.2-pristine-source)[hash]: Update hash.
2019-07-31 15:04:26 -04:00
Mark H Weaver ead739ec64
gnu: linux-libre@4.19: Update to 4.19.63.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.63.
(linux-libre-4.19-pristine-source)[hash]: Update hash.
2019-07-31 15:03:47 -04:00
Mark H Weaver fd9832e624
gnu: linux-libre@4.14: Update to 4.14.135.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.135.
(linux-libre-4.14-pristine-source)[hash]: Update hash.
2019-07-31 15:02:22 -04:00
Marius Bakke af825b11f7
gnu: Remove python2-trezor and python2-trezor-agent.
Some of the automatic python3->python2 transformation packages that these
depend upon are failing.  Just remove these trivial packages to please the CI.

* gnu/packages/finance.scm (python2-trezor-agent, python2-trezor): Remove
variables.
2019-07-31 19:37:32 +02:00
Ricardo Wurmus 14bb1c4842
gnu: Add r-cicero-monocle3.
* gnu/packages/bioconductor.scm (r-cicero-monocle3): New variable.
2019-07-31 19:01:22 +02:00
Danny Milosavljevic 3d88855dfd
gnu: claws-mail: Add startup-notification.
* gnu/packages/mail.scm (claws-mail)[inputs]: Add startup-notification.
2019-07-31 14:07:01 +02:00
Oleg Pykhalov 716908411b
gnu: emacs-org-ql: Update to 0.1.
* gnu/packages/emacs-xyz.scm (emacs-org-ql): Update to 0.1.
2019-07-31 13:08:58 +03:00
Oleg Pykhalov becb69cfe6
gnu: Add emacs-org-redmine.
* gnu/packages/emacs-xyz.scm (emacs-org-redmine): New variable.
2019-07-31 13:08:25 +03:00
Pierre Neidhardt e4ce0097c7
gnu: Add sbcl-mk-string-metrics.
* gnu/packages/lisp.scm (sbcl-mk-string-metrics): New variable.
2019-07-31 10:27:45 +02:00
Tobias Geerinckx-Rice bab94ffa0e
gnu: python-glances: Please ‘guix lint’.
* gnu/packages/python-xyz.scm (python-glances)[synopsis]: Remove article.
[description]: Double-space between sentences.
2019-07-31 05:46:07 +02:00
Tobias Geerinckx-Rice 15b4c91163
gnu: python-glances: Don't check for updates by default.
* gnu/packages/python-xyz.scm (python-glances)[source]: Add snippet.
2019-07-31 05:46:07 +02:00
Tobias Geerinckx-Rice 9898a2d345
gnu: python-glances: Update to 3.1.1.
* gnu/packages/python-xyz.scm (python-glances): Update to 3.1.1.
[propagated-inputs]: Add python-future.
2019-07-31 05:46:07 +02:00
Eric Bavier 9e43348e75
gnu: netsurf: Add libnslog input.
* gnu/packages/web.scm (netsurf)[inputs]: Add libnslog.
2019-07-30 22:37:27 -05:00
Eric Bavier 2c618972c0
gnu: Add libnslog.
* gnu/packages/web.scm (libnslog): New variable.
2019-07-30 22:36:44 -05:00
Eric Bavier 33d13088d0
gnu: netsurf: Update to 3.9.
* gnu/packages/web.scm (netsurf)[source]: Update to 3.9.
[native-inputs]: Add "xxd" input.
2019-07-30 19:27:47 -05:00
Eric Bavier 595d4ab163
gnu: nsgenbind: Update to 0.7.
* gnu/packages/web.scm (nsgenbind)[source]: Update to 0.7.  Remove use of
"name" in source url.
2019-07-30 19:27:08 -05:00
Eric Bavier 0a7473f16b
gnu: libnspsl: Update to 0.1.5.
* gnu/packages/web.scm (libnspsl)[source]: Update to 0.1.5.  Remove use of
"name" in url.
2019-07-30 19:26:33 -05:00
Eric Bavier 2dd9b64307
gnu: libdom: Update to 0.4.0.
* gnu/packages/web.scm (libdom)[source]: Update to 0.4.0.  Remove use of
"name" in source url.
2019-07-30 19:25:57 -05:00
Eric Bavier 816edf3380
gnu: libcss: Update to 0.9.0.
* gnu/packages/web.scm (libcss)[source]: Update to 0.9.0.  Remove use of
"name" in source url.
2019-07-30 19:25:23 -05:00
Eric Bavier c033093b8d
gnu: libwapcaplet: Update to 0.4.2.
* gnu/packages/web.scm (libwapcaplet)[source]: Update to 0.4.2.  Remove use of
"name" in source url.
2019-07-30 19:24:49 -05:00
Eric Bavier 33abd52719
gnu: hubbub: Update to 0.3.6.
* gnu/packages/web.scm (hubbub)[source]: Update to 0.3.6.  Remove use of
"name" in source url.
2019-07-30 19:22:25 -05:00
Leo Famulari 274ba54e53
gnu: Blender: Update to 2.80.
* gnu/packages/graphics.scm (blender): Update to 2.80.
2019-07-30 18:56:27 -04:00
Rutger Helling 1dff73acf9
gnu: glu: Update to 9.0.1.
* gnu/packages/gl.scm (glu): Update to 9.0.1.
2019-07-30 23:45:43 +02:00
Nicolas Goaziou ffbaefc71a
gnu: flare-game: Update to 1.11.
* gnu/packages/games.scm (flare-game): Update to 1.11.
2019-07-30 22:47:44 +02:00
Nicolas Goaziou f9622ec713
gnu: flare-engine: Update to 1.11.
* gnu/packages/games.scm (flare-engine): Update to 1.11.
2019-07-30 22:39:33 +02:00
Nicolas Goaziou 5473261b21
gnu: grammalecte: Update to 1.2.1.
* gnu/packages/dictionaries.scm (grammalecte): Update to 1.2.1.
2019-07-30 22:28:03 +02:00
Nicolas Goaziou 2363ed01ec
gnu: Add geany.
* gnu/packages/text-editors.scm (geany): New variable.
2019-07-30 20:01:59 +02:00
Nicolas Goaziou c55cd98c9c
gnu: Add scintilla.
* gnu/packages/text-editors.scm (scintilla): New variable.
2019-07-30 20:01:54 +02:00
Ricardo Wurmus b2dce6b5a2
gnu: Add r-monocle3.
* gnu/packages/bioconductor.scm (r-monocle3): New variable.
2019-07-30 15:52:48 +02:00
Ricardo Wurmus 86c46d7120
gnu: Add r-uwot.
* gnu/packages/cran.scm (r-uwot): New variable.
2019-07-30 15:52:07 +02:00
Ricardo Wurmus cf51d895f3
gnu: Add r-matrix-utils.
* gnu/packages/cran.scm (r-matrix-utils): New variable.
2019-07-30 15:51:42 +02:00
Ricardo Wurmus 0b2883e1f6
gnu: Add r-grr.
* gnu/packages/cran.scm (r-grr): New variable.
2019-07-30 15:51:34 +02:00
Ricardo Wurmus c4a5ce4648
gnu: Add r-rcppparallel.
* gnu/packages/cran.scm (r-rcppparallel): New variable.
2019-07-30 15:50:42 +02:00
Ricardo Wurmus 8f7d7cd05f
gnu: Add r-speedglm.
* gnu/packages/cran.scm (r-speedglm): New variable.
2019-07-30 15:50:35 +02:00
Ricardo Wurmus 3e63f078da
gnu: Add r-pbmcapply.
* gnu/packages/cran.scm (r-pbmcapply): New variable.
2019-07-30 15:50:20 +02:00
Ricardo Wurmus 37120e7a23
gnu: Add r-rhpcblasctl.
* gnu/packages/cran.scm (r-rhpcblasctl): New variable.
2019-07-30 15:50:10 +02:00
Ricardo Wurmus b46a0ee753
gnu: Add r-cicero.
* gnu/packages/bioconductor.scm (r-cicero): New variable.
2019-07-30 15:22:40 +02:00
Ricardo Wurmus 79f04920b2
gnu: Add r-glasso.
* gnu/packages/cran.scm (r-glasso): New variable.
2019-07-30 15:22:33 +02:00
Ricardo Wurmus b03dd5cfc0
gnu: Add r-sankeyd3.
* gnu/packages/cran.scm (r-sankeyd3): New variable.
2019-07-30 12:17:34 +02:00
Ricardo Wurmus 983906bb95
gnu: Add r-d3r.
* gnu/packages/cran.scm (r-d3r): New variable.
2019-07-30 12:17:34 +02:00
Rutger Helling be27b8f2e1
gnu: youtube-dl: Update to 2019.07.30.
* gnu/packages/video.scm (youtube-dl): Update to 2019.07.30.
2019-07-30 10:48:51 +02:00
Leo Famulari 18c4b0a277
gnu: Syncthing: Update to 1.2.0.
* gnu/packages/syncthing.scm (syncthing): Update to 1.2.0.
[inputs]: Remove go-golang-org-x-crypto-bcrypt and
go-golang-org-x-crypto-blowfish. Add go-golang-org-x-crypto,
go-github-com-getsentry-raven-go, go-github-com-maruel-panicparse,
go-github-com-ccding-go-stun, go-github-com-audriusbutkevicius-pfilter, and
go-github-com-lucas-clemente-quic-go.
2019-07-29 14:57:07 -04:00
Leo Famulari 0c3c597d2e
gnu: Update default Go compiler to Go 1.12.
* gnu/packages/golang.scm (go): Update to go-1.12.
* guix/build/go-build-system.scm (setup-go-environment): Set $GOCACHE.
2019-07-29 14:57:07 -04:00
Leo Famulari 20470893ea
gnu: go-github-com-prometheus-common-expfmt: Update to 0.4.1.
* gnu/packages/syncthing.scm (go-github-com-prometheus-common-expfmt):
Update to 0.4.1.
2019-07-29 14:57:06 -04:00
Leo Famulari 695d2a3326
gnu: go-github-com-prometheus-common-model: Update to 0.4.1.
* gnu/packages/syncthing.scm (go-github-com-prometheus-common-model):
Update to 0.4.1.
2019-07-29 14:57:06 -04:00
Leo Famulari 2cdfaa0263
gnu: go-github-com-prometheus-procfs: Update to 0.0.3.
* gnu/packages/syncthing.scm (go-github-com-prometheus-procfs): Update
to 0.0.3.
[arguments]: Skip the tests.
2019-07-29 14:57:06 -04:00
Leo Famulari eebf6380a4
gnu: go-github-com-prometheus-common-internal-bitbucket-org-ww-goautoneg: Update to 0.4.1.
* gnu/packages/syncthing.scm
(go-github-com-prometheus-common-internal-bitbucket-org-ww-goautoneg):
Update to 0.4.1.
2019-07-29 14:57:06 -04:00
Leo Famulari a85a78eb24
gnu: go-github-com-golang-protobuf-proto: Update to 1.3.1.
* gnu/packages/syncthing.scm (go-github-com-golang-protobuf-proto):
Update to 1.3.1.
2019-07-29 14:57:05 -04:00
Leo Famulari 371b704299
gnu: go-github-com-prometheus-client-model-go: Update to 0.0.2-1.fd36f42.
* gnu/packages/syncthing.scm (go-github-com-prometheus-client-model-go):
Update to 0.0.2-1.fd36f42.
2019-07-29 14:57:05 -04:00
Leo Famulari 307f2c44af
gnu: Go standard library 'net' packages: Update to 0.0.0-3.d28f0bd.
* gnu/packages/golang.scm (go-golang-org-x-net-ipv4, go-golang-org-x-net-bpf,
go-golang-org-x-net-context, go-golang-org-x-net-internal-socks,
go-golang-org-x-net-internal-socket, go-golang-org-x-net-internal-iana,
go-golang-org-x-net-ipv6, go-golang-org-x-net-proxy): Update to 0.0.0-3.d28f0bd.
(go-golang-org-x-net-ipv4, go-golang-org-x-net-bpf,
go-golang-org-x-net-internal-socket,
go-golang-org-x-net-ipv6)[propagated-inputs]: Add go-golang-org-x-sys-unix
2019-07-29 14:57:05 -04:00
Leo Famulari 957e6f7289
gnu: Go standard 'sys' packages: Update to 0.0.0-3.5ed2794.
* gnu/packages/golang.scm (go-golang-org-x-sys-unix,
go-golang-org-x-sys-cpu): Update to 0.0.0-3.5ed2794.
2019-07-29 14:57:05 -04:00
Leo Famulari a2dbcfdd9d
gnu: go-gopkg-in-check-v1: Update to v1-1.0.0-1.788fd78.
* gnu/packages/golang.scm (go-gopkg-in-check-v1): Update to v1-1.0.0-1.788fd78.
2019-07-29 14:57:05 -04:00
Leo Famulari c17e69b3aa
gnu: go-gopkg-in-yaml-v2: Update to 2.2.2.
* gnu/packages/golang.scm (go-gopkg-in-yaml-v2): Update to 2.2.2.
2019-07-29 14:57:04 -04:00
Leo Famulari 8629d8eda7
gnu: Prometheus Go client: Update to 0.9.4.
* gnu/packages/syncthing.scm
(go-github-com-client-golang-prometheus-promhttp,
go-github-com-prometheus-client-golang-prometheus): Update to 0.9.4.
2019-07-29 14:57:04 -04:00
Leo Famulari a93e2392ca
gnu: go-github-com-syndtr-goleveldb: Update to 1.0.1-3.c3a204f.
* gnu/packages/syncthing.scm (go-github-com-syndtr-goleveldb): Update to
1.0.1-3.c3a204f.
2019-07-29 14:57:04 -04:00
Leo Famulari 48e1cbdf6e
gnu: Add go-github-com-ccding-go-stun.
* gnu/packages/syncthing.scm (go-github-com-ccding-go-stun): New variable.
2019-07-29 14:57:04 -04:00
Leo Famulari 7cb9c4e2e1
gnu: Add go-github-com-audriusbutkevicius-pfilter.
* gnu/packages/syncthing.scm (go-github-com-audriusbutkevicius-pfilter):
New variable.
2019-07-29 14:57:03 -04:00
Leo Famulari e5906bb440
gnu: Go Prometheus tools: Update to 0.9.3.
* gnu/packages/syncthing.scm (go-github-com-client-golang-prometheus-promhttp,
go-github-com-prometheus-client-golang-prometheus): Update to 0.9.3.
2019-07-29 14:57:03 -04:00
Leo Famulari d0ced446d0
gnu: Add go-github-com-maruel-panicparse.
* gnu/packages/golang.scm (go-github-com-maruel-panicparse): New variable.
2019-07-29 14:57:03 -04:00
Leo Famulari 8ffc727e38
gnu: go-github-com-getsentry-raven-go: Update to 0.2.0-0.5c24d51.
* gnu/packages/golang.scm (go-github-com-getsentry-raven-go): Update to
0.2.0-0.5c24d51.
(propagated-inputs): Add go-github-com-certifi-gocertifi and
go-github-com-pkg-errors.
2019-07-29 14:57:03 -04:00
Leo Famulari ea22aa1faf
gnu: Add go-github-com-certifi-gocertifi.
* gnu/packages/tls.scm (go-github-com-certifi-gocertifi): New variable.
2019-07-29 14:57:03 -04:00
Leo Famulari 8c6be10aba
gnu: go-github-com-pkg-errors: Update to 0.8.1-0.27936f6.
* gnu/packages/golang.scm (go-github-com-pkg-errors): Update to 0.8.1-0.27936f6.
2019-07-29 14:57:03 -04:00
Leo Famulari 2da5275f81
gnu: Move go-github-com-pkg-errors to the Golang package module.
* gnu/packages/syncthing.scm (go-github-com-pkg-errors): Move ...
* gnu/packages/golang.scm (go-github-com-pkg-errors): ... here.
2019-07-29 14:57:02 -04:00
Leo Famulari 6d766bec44
gnu: Add go-github-com-lucas-clemente-quic-go.
* gnu/packages/golang.scm (go-github-com-lucas-clemente-quic-go: New variable.
2019-07-29 14:57:02 -04:00
Leo Famulari 8201afdf0c
gnu: Add go-github-com-cheekybits-genny.
* gnu/packages/golang.scm (go-github-com-cheekybits-genny): New variable.
2019-07-29 14:57:02 -04:00
Leo Famulari a3b1dc49bb
gnu: Add go-github-com-marten-seemann-qtls.
* gnu/packages/golang.scm (go-github-com-marten-seemann-qtls): New variable.
2019-07-29 14:57:02 -04:00
Leo Famulari 5bbf203c34
gnu: Add go-golang-org-x-crypto.
* gnu/packages/golang.scm (go-golang-org-x-crypto): New variable.
2019-07-29 14:57:02 -04:00
Leo Famulari 33b67efeb4
gnu: Add go-golang-org-x-tools.
* gnu/packages/golang.scm (go-golang-org-x-tools): New variable.
2019-07-29 14:57:02 -04:00
Brian Leung cb3625bcd7
gnu: Add go-github-com-junegunn-fzf.
* gnu/packages/terminals.scm (go-github-com-junegunn-fzf): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-07-29 16:17:22 +02:00
Brian Leung f81573500e
gnu: Add go-github-com-mattn-go-shellwords.
* gnu/packages/golang.scm (go-github-com-mattn-go-shellwords): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-07-29 16:10:21 +02:00
Brian Leung a6689b99ef
gnu: Add go-github-com-gdamore-tcell.
* gnu/packages/golang.scm (go-github-com-gdamore-tcell): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-07-29 16:10:13 +02:00
Brian Leung d050000a44
gnu: go-github.com-mattn-go-runewidth: Update to 0.0.4-1.703b5e6.
* gnu/packages/textutils.scm (go-github.com-mattn-go-runewidth): Update to
0.0.4-1.703b5e6.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-07-29 16:09:39 +02:00
Brian Leung 42a0cfee60
gnu: Add go-github-com-gdamore-encoding.
* gnu/packages/golang.scm (go-github-com-gdamore-encoding): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-07-29 16:09:27 +02:00
Brian Leung a881a087e5
gnu: Add go-golang-org-colorful.
* gnu/packages/golang.scm (go-golang-org-colorful): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-07-29 16:09:18 +02:00
Brian Leung be42a38a5b
gnu: Add go-golang-org-sql-mock.
* gnu/packages/golang.scm (go-golang-org-sql-mock): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-07-29 16:09:05 +02:00
Brian Leung bd184dc6eb
gnu: go-golang-org-x-text-unicode-norm: Inherit from related package.
* gnu/packages/golang.scm (go-golang-org-x-text-unicode-norm): Inherit from
go-golang-org-x-text-encoding.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-07-29 16:08:48 +02:00
Brian Leung 7e6da91fa7
gnu: go-golang-org-x-text-transform: Inherit from related package.
* gnu/packages/golang.scm (go-golang-org-x-text-transform): Inherit from
go-golang-org-x-text-encoding.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-07-29 16:08:33 +02:00
Brian Leung 06c2d0e6c1
gnu: Add go-golang-org-x-text-encoding.
* gnu/packages/golang.scm (go-golang-org-x-text-encoding): New variable.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-07-29 16:08:18 +02:00
Rutger Helling 767a0a18d8
gnu: btrfs-progs: Update to 5.2.1.
* gnu/packages/linux.scm (btrfs-progs): Update to 5.2.1.
2019-07-29 13:55:00 +02:00
Mark H Weaver ab20b3ed91
gnu: linux-libre: Update to 5.2.4.
* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.4.
(linux-libre-5.2-pristine-source)[hash]: Update hash.
2019-07-28 19:00:12 -04:00
Mark H Weaver b64b66b890
gnu: linux-libre@4.19: Update to 4.19.62.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.62.
(linux-libre-4.19-pristine-source)[hash]: Update hash.
2019-07-28 18:58:44 -04:00
Rutger Helling 7e5eda0c08
gnu: unbound: Update to 1.9.2.
* gnu/packages/dns.scm (unbound): Update to 1.9.2.
2019-07-28 11:06:59 +02:00
Marius Bakke b23579d0da
gnu: signify: Update to 26.
* gnu/packages/crypto.scm (signify): Update to 26.
[source]: Change to URL-FETCH to get the shiny new release tarball.
2019-07-27 23:58:49 +02:00
Marius Bakke 9b7f721db9
gnu: feh: Update to 3.2.1.
* gnu/packages/image-viewers.scm (feh): Update to 3.2.1.
2019-07-27 23:58:49 +02:00
Marius Bakke d5571bc652
gnu: nginx: Update to 1.17.2. 2019-07-27 23:58:49 +02:00
Marius Bakke bfbc2d876a
gnu: zstd: Update to 1.4.2. 2019-07-27 23:58:49 +02:00
Marius Bakke eca0a885e7
gnu: kodi: Update to 18.3.
* gnu/packages/kodi.scm (kodi): Update to 18.3.
2019-07-27 23:58:49 +02:00
Arne Babenhauserheide 85a4531f64
gnu: pngcrush: Edit description.
* gnu/packages/image.scm (pngcrush)[description]: Fix typo.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2019-07-27 23:25:22 +02:00
Tobias Geerinckx-Rice 3563220e1e
gnu: Add libva-utils.
* gnu/packages/video.scm (libva-utils): New public variable.
2019-07-27 23:25:22 +02:00
Tobias Geerinckx-Rice d8d7565b82
gnu: Add intel-vaapi-driver.
* gnu/packages/video.scm (intel-vaapi-driver): New public variable.
2019-07-27 23:25:21 +02:00
Mark H Weaver 76b96720e2
gnu: linux-libre: Update to 5.2.3.
* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.3.
(linux-libre-5.2-pristine-source)[hash]: Update hash.
2019-07-27 17:07:58 -04:00
Mark H Weaver d83514baf2
gnu: linux-libre@4.19: Update to 4.19.61.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.61.
(linux-libre-4.19-pristine-source)[hash]: Update hash.
2019-07-27 17:07:55 -04:00
Mark H Weaver e78c2b50df
gnu: linux-libre: Update deblobbing scripts.
* gnu/packages/linux.scm (deblob-scripts-5.2, deblob-scripts-4.19): Update
to versions 5.2.3 and 4.19.61 respectively, and update the hashes.
(deblob-scripts-4.14, deblob-scripts-4.9, deblob-scripts-4.4): Update to
versions 4.14.134, 4.9.186, and 4.4.186 respectively, although the scripts
themselves are unchanged.
2019-07-27 17:07:53 -04:00
Mark H Weaver d0aff87337
gnu: linux-libre: Verbosely pack the deblobbed linux-libre tarball.
This works around timeouts that sometimes occur after 1 hour of silence
while packing the linux-libre source tarball on slower machines.

* gnu/packages/linux.scm (make-linux-libre-source): Pass 'v' to 'tar'
when packing the result tarball.
2019-07-27 17:07:51 -04:00
Tobias Geerinckx-Rice 24446ce299
gnu: linux-libre: Restrict ‘dmesg’ to privileged users.
* gnu/packages/linux.scm (%default-extra-linux-options):
Set CONFIG_SECURITY_DMESG_RESTRICT.
2019-07-27 01:18:24 +02:00
Ludovic Courtès 4b0356590a
gnu: hpcguix-web: Update to f39c90b.
* gnu/packages/web.scm (hpcguix-web): Update to f39c90b.
[propagated-inputs]: Use GUILE-JSON-3 instead of GUILE-JSON-1.
2019-07-27 01:04:57 +02:00
Jens Mølgaard 1a2d0d294b
gnu: Add emacs-mastodon.
* gnu/packages/emacs-xyz.scm (emacs-mastodon): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-27 01:00:03 +02:00
Jens Mølgaard d3f2f86a7f
gnu: Add emacs-wc-mode.
* gnu/packages/emacs-xyz.scm (emacs-wc-mode): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-27 01:00:03 +02:00
Jens Mølgaard 40c4c0058f
gnu: Add emacs-ox-pandoc.
* gnu/packages/emacs-xyz.scm (emacs-ox-pandoc): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-27 01:00:03 +02:00
Jens Mølgaard 9f0ae848e2
gnu: Add emacs-ox-epub.
* gnu/packages/emacs-xyz.scm (emacs-ox-epub): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-27 01:00:03 +02:00
Jens Mølgaard 74a2489009
Add emacs-gnus-alias.
* gnu/packages/emacs-xyz.scm (emacs-gnus-alias): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-27 00:59:47 +02:00
Jens Mølgaard c1cae86de3
gnu: Add emacs-bug-hunter.
* gnu/packages/emacs-xyz.scm (emacs-bug-hunter): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-27 00:59:41 +02:00
Rutger Helling 20269b6e08
gnu: sdl2: Update to 2.0.10.
* gnu/packages/sdl.scm (sdl2): Update to 2.0.10.
2019-07-26 19:08:46 +02:00
Ludovic Courtès 422e187fb4
gnu: jami-client-gnome: Rename to 'jami'.
* gnu/packages/telephony.scm (jami-client-gnome): Rename to...
(jami): ... this.  Update 'name' field accordingly.
(jami-client-gnome): New variable.
2019-07-26 11:21:36 +02:00
Tobias Geerinckx-Rice cf40f8e4d7
gnu: vlc: Update to 3.0.7.1.
* gnu/packages/video.scm (vlc): Update to 3.0.7.1.
2019-07-26 09:48:37 +02:00
Tobias Geerinckx-Rice 332a276503
gnu: clusterssh: Run.
* gnu/packages/admin.scm (clusterssh)[arguments]:
Add ’augment-library-path’ phase so libraries are found.
[propagated-inputs]: Make all of these…
[inputs]: …regular.
2019-07-26 09:48:37 +02:00
Tobias Geerinckx-Rice 3d909a0acf
gnu: youtube-dl: Update to 2019.07.16.
* gnu/packages/video.scm (youtube-dl): Update to 2019.07.16.
2019-07-26 01:16:40 +02:00
Tobias Geerinckx-Rice 28e4c3bbb0
gnu: dkimproxy: Fix dkim_responder.pl.
* gnu/packages/mail.scm (dkimproxy)[arguments]: Wrap dkim_responder.pl.
[inputs]: Add perl-mime-tools and perl-timedate.
2019-07-26 01:16:40 +02:00
Tobias Geerinckx-Rice 8c07824c52
gnu: dkimproxy: Factorise wrapping.
This is a follow-up to 66e39000c6, in a
way, since it adds the forgotten *6 inputs.

* gnu/packages/mail.scm (dkimproxy)[arguments]: Refactor ’make-wrapper’ phase.
Add perl-io-socket-inet6 and perl-socket6 to the list.
2019-07-26 01:16:39 +02:00
Tobias Geerinckx-Rice d045dce16d
gnu: dkimproxy: Keyword-stuff descriptions.
* gnu/packages/mail.scm (dkimproxy)[synopsis]: Do so.
[description]: Also.
2019-07-26 01:16:39 +02:00
Tobias Geerinckx-Rice 858be79474
gnu: perl-net-dns-resolver-mock: Edit synopsis & description.
* gnu/packages/networking.scm (perl-net-dns-resolver-mock)[synopsis]:
Remove unfortunate ‘a’.
[description]: Fix typo.  Edit for clarity.
2019-07-25 22:42:40 +02:00
Tobias Geerinckx-Rice ce3a71c619
gnu: perl-net-dns-resolver-mock: Unpropagate perl-net-dns.
* gnu/packages/networking.scm (perl-net-dns-resolver-mock)[inputs]:
Move perl-net-dns to here…
[propagated-inputs]: …from here.
2019-07-25 22:42:40 +02:00
Tobias Geerinckx-Rice 2b456dd836
gnu: dkimproxy: Correct licence.
* gnu/packages/mail.scm (dkimproxy)[license]: Change to gpl2+.
2019-07-25 22:42:39 +02:00
Tobias Geerinckx-Rice 66e39000c6
gnu: dkimproxy: Add IPv6 support.
* gnu/packages/mail.scm (dkimproxy)[source]: Add patch.
* gnu/packages/patches/dkimproxy-add-ipv6-support.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-07-25 22:42:39 +02:00
Tobias Geerinckx-Rice 41097b2dee
gnu: libvirt: Don't use bogus cgroup.
Should fix <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=36634>.

* gnu/packages/virtualization.scm (libvirt)[source]: Add patch.
* gnu/packages/patches/libvirt-remove-ATTRIBUTE_UNUSED.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-07-25 21:59:07 +02:00
Tobias Geerinckx-Rice 12ea257122
gnu: clusterssh: Don't propagate xterm.
* gnu/packages/admin.scm (clusterssh)[arguments]: Add ‘refer-to-inputs’ and ‘delete-failing-tests’ phases.
[inputs]: Move xterm to here…
[propagated-inputs]: …from here.
2019-07-25 21:59:07 +02:00
Tobias Geerinckx-Rice b07aea69dd
gnu: clustershh: Add missing perl-sort-naturally input.
* gnu/packages/admin.scm (clusterssh)[propagated-inputs]:
Add perl-sort-naturally.
2019-07-25 21:59:06 +02:00
Julien Lepiller 8582202c5b
gnu: Add dkimproxy.
* gnu/packages/mail.scm (dkimproxy): New variable.
2019-07-25 21:27:27 +02:00
Julien Lepiller 930c52ae66
gnu: Add perl-mail-dkim.
* gnu/packages/mail.scm (perl-mail-dkim): New variable.
2019-07-25 21:27:25 +02:00
Julien Lepiller ac629e625c
gnu: Add perl-net-dns-resolver-mock.
* gnu/packages/networking.scm (perl-net-dns-resolver-mock): New
variable.
2019-07-25 21:27:22 +02:00
Julien Lepiller f115d81748
gnu: Add perl-mail-authenticationresults.
* gnu/packages/mail.scm (perl-mail-authenticationresults): New variable.
2019-07-25 21:26:58 +02:00
Leo Famulari 1074b37073
gnu: Go 1.12: Update to 1.12.7.
*  gnu/packages/golang.scm (go-1.12): Update to 1.12.7.
2019-07-25 13:07:49 -04:00
Leo Famulari ec8c1681e8
gnu: Go 1.11: Update to 1.11.12.
* gnu/packages/golang.scm (go-1.11): Update to 1.11.12.
2019-07-25 13:07:42 -04:00
Tobias Geerinckx-Rice 108edc964b
gnu: exim: Update to 4.92.1 [fixes CVE-2019-13917].
* gnu/packages/mail.scm (exim): Update to 4.92.1.
2019-07-25 17:35:29 +02:00
Rutger Helling 15027b89a8
gnu: xpra: Update to 2.5.3.
* gnu/packages/xorg.scm (xpra): Update to 2.5.3.
2019-07-25 14:24:07 +02:00
Rutger Helling 688d8f22e2
gnu: mesa: Correct configure flag.
* gnu/packages/gl.scm (mesa): Build the iris driver for the correct systems.
2019-07-25 11:37:36 +02:00
Rutger Helling 9c0170a6e9
gnu: mesa: Update to 19.1.3.
* gnu/packages/gl.scm (mesa): Update to 19.1.3.
[configure-flags]: Add iris to gallium-drivers.
2019-07-25 11:13:20 +02:00
Rutger Helling fd730a8e7d
gnu: vulkan-headers: Update to 1.1.114.
* gnu/packages/vulkan.scm (vulkan-headers): Update to 1.1.114.
* gnu/packages/vulkan.scm (vulkan-loader): Update hash.
* gnu/packages/vulkan.scm (vulkan-tools): Update hash.
2019-07-25 11:13:20 +02:00
Jovany Leandro G.C 7c0411879b
gnu: Add xchm.
* gnu/packages/ebook.scm (xchm): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-25 09:23:17 +02:00
Kei Kebreau 8172ab2dde
gnu: starfighter: Update to 2.0.0.3.
* gnu/packages/games.scm (starfighter): Update to 2.0.0.3.
[source]: Use url-fetch and remove 'file-name' field.
[native-inputs]: Remove autoconf and automake.
2019-07-24 21:48:07 -04:00
Ludovic Courtès 91f55717ab
gnu: Explicitly refer to 'guile-json-1' when needed.
* gnu/packages/bioinformatics.scm (rcas-web)[inputs]: Change
'guile-json' to 'guile-json-1'.
* gnu/packages/ci.scm (cuirass)[inputs]: Likewise.
* gnu/packages/guile-xyz.scm (artanis)[inputs]: Likewise.
* gnu/packages/guile-xyz.scm (jupyter-guile-kernel)[inputs]: Likewise.
* gnu/packages/guile-xyz.scm (guile-mastodon)[inputs]: Likewise.
* gnu/packages/mail.scm (mumi)[inputs]: Likewise.
* gnu/packages/package-management.scm (guix)[inputs]: Likewise.
* gnu/packages/package-management.scm (guix-daemon)[inputs]: Likewise.
* gnu/packages/web.scm (hpcguix-web)[inputs]: Likewise.
2019-07-25 00:18:45 +02:00
Ludovic Courtès 584a3ca3a4
gnu: guile-json: Define 'guile-json-1'.
* gnu/packages/guile.scm (guile-json-1): New variable.
2019-07-25 00:18:45 +02:00
zimoun a0efa069a1
gnu: Add r-depecher.
* gnu/packages/bioconductor.scm (r-depecher): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:39 +02:00
zimoun 1adb9cbc5e
gnu: Add r-mixomics.
* gnu/packages/bioconductor.scm (r-mixomics): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:39 +02:00
zimoun 1502751b32
gnu: Add r-flowsom.
* gnu/packages/bioconductor.scm (r-flowsom): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:39 +02:00
zimoun e0cb053edb
gnu: Add r-flowmeans.
* gnu/packages/bioconductor.scm (r-flowmeans): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:39 +02:00
zimoun ed6f49fc41
gnu: Add r-consensusclusterplus.
* gnu/packages/bioconductor.scm (r-consensusclusterplus): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:39 +02:00
zimoun a0422d18f1
gnu: Add r-flowutils.
* gnu/packages/bioconductor.scm (r-flowutils): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:39 +02:00
zimoun a6fedf1f37
gnu: Add r-flowcore.
* gnu/packages/bioconductor.scm (r-flowcore): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:39 +02:00
zimoun ad8f46c69e
gnu: Add r-all.
* gnu/packages/bioconductor.scm (r-all): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:39 +02:00
zimoun 6deb08a359
gnu: Add r-kableextra.
* gnu/packages/cran.scm (r-kableextra): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:38 +02:00
zimoun 1c0b2e7483
gnu: Add r-umap.
* gnu/packages/cran.scm (r-umap): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2019-07-24 23:05:38 +02:00
Jelle Licht 97bc8c47bb
gnu: emacs-gitpatch: Update to 0.5.1.
* gnu/packages/emacs-xyz.scm (emacs-gitpatch): Update to 0.5.1.
2019-07-24 22:23:19 +02:00
Tobias Geerinckx-Rice 8126142baf
gnu: terminator: Propagate gsettings-desktop-schemas.
* gnu/packages/gnome.scm (terminator)[propagated-inputs]: Add gsettings-desktop-schemas.
2019-07-24 21:29:10 +02:00
Tobias Geerinckx-Rice 4f20e0a2f6
gnu: spice-gtk: Update to 0.37.
* gnu/packages/spice.scm (spice-gtk): Update to 0.37.
[propagated-inputs]: Use latest spice-protocol.
(spice-protocol-0.12): Remove unused variable.
2019-07-24 21:29:10 +02:00
Tobias Geerinckx-Rice 7e2c050a88
gnu: libvirt-glib: Propagate pkg-config requirements.
* gnu/packages/virtualization.scm (libvirt-glib)[inputs]: Move glib,
libvirt, libxml2, and gobject-introspection…
[native-inputs]: …here.
2019-07-24 21:29:10 +02:00
Tobias Geerinckx-Rice 7dfda55ba2
gnu: libvirt-glib: Update to 2.0.0.
* gnu/packages/virtualization.scm (libvirt-glib): Update to 2.0.0.
[arguments]: Remove ‘fix-tests’ phase.
2019-07-24 21:29:09 +02:00
Ricardo Wurmus d350d5e714
gnu: texlive-amsfonts: Build .ins file instead of installing fonts twice.
* gnu/packages/tex.scm (texlive-amsfonts)[arguments]: Override build targets;
rename font build directory to avoid installing it a second time.
2019-07-24 18:25:12 +02:00
Ricardo Wurmus a6405e0333
gnu: Rename references to obsolete "texlive-fonts-cm".
* gnu/packages/tex.scm (texlive-amsfonts, texlive-fonts-latex, texlive-etex,
texlive-hyph-utf8, texlive-base, texlive-fonts-ec,
texlive-fonts-rsfs)[native-inputs]: Rename texlive-fonts-cm to texlive-cm.
[arguments]: Adjust.
2019-07-24 12:19:54 +02:00
Ricardo Wurmus fdb8841fa6
gnu: texlive-base: Include texlive-tetex.
* gnu/packages/tex.scm (texlive-base)[default-packages]: Add texlive-tetex.
2019-07-24 12:13:44 +02:00
Ricardo Wurmus 192ad4d16f
gnu: Add texlive-tetex.
* gnu/packages/tex.scm (texlive-tetex): New variable.
2019-07-24 12:13:23 +02:00
Ricardo Wurmus 81ca46147d
gnu: Add texlive-beamer.
* gnu/packages/tex.scm (texlive-beamer): New variable.
(texlive-latex-beamer): Deprecate package.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus b7d779db34
gnu: Add texlive-cm.
* gnu/packages/tex.scm (texlive-cm): New variable.
(texlive-fonts-cm): Deprecate package.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus df19dc2f86
gnu: Add texlive-zapfding.
* gnu/packages/tex.scm (texlive-zapfding): New variable.
(texlive-fonts-adobe-zapfding): Deprecate package.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus 57bee3cc91
gnu: Add texlive-palatino.
* gnu/packages/tex.scm (texlive-palatino): New variable.
(texlive-fonts-adobe-palatino): Deprecate package.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus 1aaa117c0c
gnu: Add texlive-times.
* gnu/packages/tex.scm (texlive-times): New variable.
(texlive-fonts-adobe-times): Deprecate package.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus 1f50ae6346
gnu: Add texlive-charter.
* gnu/packages/tex.scm (texlive-charter): New variable.
(texlive-fonts-charter): Deprecate package.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus 8fee5067b2
gnu: texlive-tex-plain: Simplify.
* gnu/packages/tex.scm (texlive-tex-plain): Implement with
SIMPLE-TEXLIVE-PACKAGE.
[description]: Use full sentences.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus 8bc9afeb9e
gnu: Add texlive-xypic.
* gnu/packages/tex.scm (texlive-xypic): New variable.
(texlive-fonts-xypic, texlive-generic-xypic): Deprecate them.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus 0901f1b042
gnu: Add texlive-txfonts.
* gnu/packages/tex.scm (texlive-txfonts): New variable.
(texlive-fonts-txfonts): Deprecate package.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus 6a4fe83b5e
gnu: Add texlive-ae.
* gnu/packages/tex.scm (texlive-ae): New variable.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus 4253358ab0
gnu: texlive-fonts-ec: Update license URL.
* gnu/packages/tex.scm (texlive-fonts-ec)[license]: Update URL.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus f75aa97f95
gnu: Replace uses of texlive-*-amsfonts.
* gnu/packages/algebra.scm (pari-gp)[native-inputs]: Replace
texlive-fonts-amsfonts and texlive-latex-amsfonts with texlive-amsfonts in
texlive-union.
* gnu/packages/docbook.scm (dblatex)[inputs]: Same.
* gnu/packages/plotutils.scm (asymptote)[native-inputs]: Same.
* gnu/packages/python-xyz.scm (python-numpy-documentation,
python-matplotlib-documentation, python-ipython-documentation)
[native-inputs]: Same.
* gnu/packages/statistics.scm (r-with-tests)[native-inputs]: Same.
* gnu/packages/tex.scm (teximpatient)[native-inputs]: Same.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus 82ff725df9
gnu: Add texlive-amsfonts.
* gnu/packages/tex.scm (texlive-fonts-amsfonts, texlive-latex-amsfonts):
Deprecate and merge...
(texlive-amsfonts): ...to this new package.
2019-07-24 09:46:49 +02:00
Ricardo Wurmus e976d3618d
gnu: texlive-latex-base: Simplify.
* gnu/packages/tex.scm (texlive-latex-base)[source]: Use TEXLIVE-ORIGIN.
[arguments]: Simplify build phase by running fmtutil-sys; adjust install
phase.
[native-inputs]: Remove texlive-generic-unicode-data,
texlive-generic-dehyph-exptl, texlive-generic-tex-ini-files,
texlive-latex-latexconfig, texlive-generic-hyphen, texlive-generic-ruhyphen,
texlive-generic-ukrhyph, texlive-generic-config, and
texlive-latex-base-support-files; add texlive-tex-ini-files, texlive-kpathsea,
and texlive-luatexconfig.
[propagated-inputs]: Add texlive-etex, texlive-hyph-utf8, texlive-hyphen-base,
texlive-hyphen-afrikaans, texlive-hyphen-ancientgreek,
texlive-hyphen-armenian, texlive-hyphen-basque, texlive-hyphen-belarusian,
texlive-hyphen-bulgarian, texlive-hyphen-catalan, texlive-hyphen-chinese,
texlive-hyphen-churchslavonic, texlive-hyphen-coptic, texlive-hyphen-croatian,
texlive-hyphen-czech, texlive-hyphen-danish, texlive-hyphen-dutch,
texlive-hyphen-english, texlive-hyphen-esperanto, texlive-hyphen-estonian,
texlive-hyphen-ethiopic, texlive-hyphen-finnish, texlive-hyphen-french,
texlive-hyphen-friulan, texlive-hyphen-galician, texlive-hyphen-georgian,
texlive-hyphen-german, texlive-hyphen-greek, texlive-hyphen-hungarian,
texlive-hyphen-icelandic, texlive-hyphen-indic, texlive-hyphen-indonesian,
texlive-hyphen-interlingua, texlive-hyphen-irish, texlive-hyphen-italian,
texlive-hyphen-kurmanji, texlive-hyphen-latin, texlive-hyphen-latvian,
texlive-hyphen-lithuanian, texlive-hyphen-mongolian, texlive-hyphen-norwegian,
texlive-hyphen-occitan, texlive-hyphen-piedmontese, texlive-hyphen-polish,
texlive-hyphen-portuguese, texlive-hyphen-romanian, texlive-hyphen-romansh,
texlive-hyphen-russian, texlive-hyphen-sanskrit, texlive-hyphen-serbian,
texlive-hyphen-slovak, texlive-hyphen-slovenian, texlive-hyphen-spanish,
texlive-hyphen-swedish, texlive-hyphen-thai, texlive-hyphen-turkish,
texlive-hyphen-turkmen, texlive-hyphen-ukrainian, texlive-hyphen-uppersorbian,
texlive-hyphen-welsh, texlive-unicode-data, texlive-ukrhyph, texlive-ruhyphen,
and texlive-latexconfig.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus b93d9dac24
gnu: texlive-dvips: Update source files.
* gnu/packages/tex.scm (texlive-dvips): Include source files from the TeX Live
SVN repository according to texlive.tlpdb.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus dfdc002c9b
gnu: texlive-bin: Include scripts.
* gnu/packages/tex.scm (texlive-bin)[inputs]: Add texlive-scripts.
[arguments]: Let fmtutil.pl reference scripts directory.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus 2b25469476
gnu: Add texlive-kpathsea.
* gnu/packages/tex.scm (texlive-kpathsea): New variable.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus 346354a18e
gnu: Add texlive-etoolbox.
* gnu/packages/tex.scm (texlive-etoolbox): New variable.
(texlive-latex-etoolbox): Deprecate package.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus fb01a2965a
gnu: Add texlive-doi.
* gnu/packages/tex.scm (texlive-doi): New variable.
(texlive-latex-doi): Deprecate package.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus a72058b950
gnu: Add texlive-seminar.
* gnu/packages/tex.scm (texlive-seminar): New variable.
(texlive-latex-seminar): Deprecate package.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus 6090b6c474
gnu: Add texlive-pstool.
* gnu/packages/tex.scm (texlive-pstool): New variable.
(texlive-latex-pstool): Deprecate package.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus 1333198da8
gnu: Add texlive-filemod.
* gnu/packages/tex.scm (texlive-filemod): New variable.
(texlive-latex-filemod): Deprecate package.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus c97d1a9123
gnu: Add texlive-url.
* gnu/packages/tex.scm (texlive-url): New variable.
(texlive-latex-url): Deprecate package.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus 152950d494
gnu: texlive-latex-graphics: Simplify.
* gnu/packages/tex.scm (texlive-latex-graphics)[arguments]: Remove custom
phases.
[native-inputs]: Remove.
[propagated-inputs]: Add texlive-graphics-cfg and texlive-graphics-def.
[license]: Update.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus 83a5c6171b
gnu: Add texlive-graphics-cfg.
* gnu/packages/tex.scm (texlive-graphics-cfg): New variable.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus f1b0939dbc
gnu: Add texlive-graphics-def.
* gnu/packages/tex.scm (texlive-graphics-def): New variable.
2019-07-24 09:46:48 +02:00
Ricardo Wurmus f104ff618a
gnu: Add texlive-epsf.
* gnu/packages/tex.scm (texlive-epsf): New variable.
(texlive-generic-epsf): Deprecate package.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus 114a5d85aa
gnu: Add texlive-lm.
* gnu/packages/tex.scm (texlive-lm): New variable.
(texlive-fonts-lm): Deprecate package.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus 14a87760fa
gnu: texlive-fontname: Simplify.
* gnu/packages/tex.scm (texlive-fontname): Implement with
SIMPLE-TEXLIVE-PACKAGE.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus cdc960922d
gnu: Add texlive-cm-super.
* gnu/packages/tex.scm (texlive-cm-super): New variable.
(texlive-fonts-cm-super): Deprecate package.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus cd957f4fc6
gnu: Add texlive-mflogo-font.
* gnu/packages/tex.scm (texlive-mflogo-font): New variable.
(texlive-fonts-mflogo-font): Deprecate package.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus e9816fcbb4
gnu: Add texlive-fontinst.
* gnu/packages/tex.scm (texlive-fontinst): New variable.
(texlive-tex-fontinst-base): Deprecate package.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus 7a9b737a8b
gnu: Add texlive-docstrip.
* gnu/packages/tex.scm (texlive-docstrip): New variable.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus 57680dc2c5
gnu: Add texlive-latexconfig.
* gnu/packages/tex.scm (texlive-latexconfig): New variable.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus 1e39065d29
gnu: Add texlive-etex.
* gnu/packages/tex.scm (texlive-etex): New variable.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus c87d8a1405
gnu: Add texlive-ruhyphen.
* gnu/packages/tex.scm (texlive-ruhyphen): New variable.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus 10e8b3385c
gnu: Add texlive-ukrhyph.
* gnu/packages/tex.scm (texlive-ukrhyph): New variable.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus 0d4088e45e
gnu: Add texlive-hyphen-welsh.
* gnu/packages/tex.scm (texlive-hyphen-welsh): New variable.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus 71e5812518
gnu: Add texlive-hyphen-uppersorbian.
* gnu/packages/tex.scm (texlive-hyphen-uppersorbian): New variable.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus cf8f4e1ba3
gnu: Add texlive-hyphen-ukrainian.
* gnu/packages/tex.scm (texlive-hyphen-ukrainian): New variable.
2019-07-24 09:46:47 +02:00
Ricardo Wurmus 5f50dd9580
gnu: Add texlive-hyphen-turkmen.
* gnu/packages/tex.scm (texlive-hyphen-turkmen): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus e80ecb7bf2
gnu: Add texlive-hyphen-turkish.
* gnu/packages/tex.scm (texlive-hyphen-turkish): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus 3eaee8fbbd
gnu: Add texlive-hyphen-thai.
* gnu/packages/tex.scm (texlive-hyphen-thai): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus 1e7db18177
gnu: Add texlive-hyphen-swedish.
* gnu/packages/tex.scm (texlive-hyphen-swedish): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus 40b009b8c9
gnu: Add texlive-hyphen-spanish.
* gnu/packages/tex.scm (texlive-hyphen-spanish): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus 3cd8868f32
gnu: Add texlive-hyphen-slovenian.
* gnu/packages/tex.scm (texlive-hyphen-slovenian): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus af13345a6c
gnu: Add texlive-hyphen-slovak.
* gnu/packages/tex.scm (texlive-hyphen-slovak): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus 67c7900e99
gnu: Add texlive-hyphen-serbian.
* gnu/packages/tex.scm (texlive-hyphen-serbian): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus 19e31f91d0
gnu: Add texlive-hyphen-sanskrit.
* gnu/packages/tex.scm (texlive-hyphen-sanskrit): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus 483d8af60c
gnu: Add texlive-hyphen-russian.
* gnu/packages/tex.scm (texlive-hyphen-russian): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus c4abd4a2fc
gnu: Add texlive-hyphen-romansh.
* gnu/packages/tex.scm (texlive-hyphen-romansh): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus 6fa3b112b9
gnu: Add texlive-hyphen-romanian.
* gnu/packages/tex.scm (texlive-hyphen-romanian): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus 5fd12ffbc8
gnu: Add texlive-hyphen-portuguese.
* gnu/packages/tex.scm (texlive-hyphen-portuguese): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus 9c451e7745
gnu: Add texlive-hyphen-polish.
* gnu/packages/tex.scm (texlive-hyphen-polish): New variable.
2019-07-24 09:46:46 +02:00
Ricardo Wurmus db3f7fdad0
gnu: Add texlive-hyphen-piedmontese.
* gnu/packages/tex.scm (texlive-hyphen-piedmontese): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus 033406ad14
gnu: Add texlive-hyphen-occitan.
* gnu/packages/tex.scm (texlive-hyphen-occitan): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus da2b2d490b
gnu: Add texlive-hyphen-norwegian.
* gnu/packages/tex.scm (texlive-hyphen-norwegian): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus 1890799b62
gnu: Add texlive-hyphen-mongolian.
* gnu/packages/tex.scm (texlive-hyphen-mongolian): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus af0e6cc82a
gnu: Add texlive-hyphen-lithuanian.
* gnu/packages/tex.scm (texlive-hyphen-lithuanian): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus e8effd273f
gnu: Add texlive-hyphen-latvian.
* gnu/packages/tex.scm (texlive-hyphen-latvian): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus 2f3a07c694
gnu: Add texlive-hyphen-latin.
* gnu/packages/tex.scm (texlive-hyphen-latin): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus 0b3442575c
gnu: Add texlive-hyphen-kurmanji.
* gnu/packages/tex.scm (texlive-hyphen-kurmanji): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus e33250e48a
gnu: Add texlive-hyphen-italian.
* gnu/packages/tex.scm (texlive-hyphen-italian): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus 88963a8e70
gnu: Add texlive-hyphen-irish.
* gnu/packages/tex.scm (texlive-hyphen-irish): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus 9535f149ec
gnu: Add texlive-hyphen-interlingua.
* gnu/packages/tex.scm (texlive-hyphen-interlingua): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus b6832d7941
gnu: Add texlive-hyphen-indonesian.
* gnu/packages/tex.scm (texlive-hyphen-indonesian): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus 825285d810
gnu: Add texlive-hyphen-indic.
* gnu/packages/tex.scm (texlive-hyphen-indic): New variable.
2019-07-24 09:46:45 +02:00
Ricardo Wurmus 33a446e67e
gnu: Add texlive-hyphen-icelandic.
* gnu/packages/tex.scm (texlive-hyphen-icelandic): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus 36f03c33ba
gnu: Add texlive-hyphen-hungarian.
* gnu/packages/tex.scm (texlive-hyphen-hungarian): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus 65e4cfd171
gnu: Add texlive-hyphen-greek.
* gnu/packages/tex.scm (texlive-hyphen-greek): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus 6028620db1
gnu: Add texlive-hyphen-german.
* gnu/packages/tex.scm (texlive-hyphen-german): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus b2334b6e20
gnu: Add texlive-hyphen-georgian.
* gnu/packages/tex.scm (texlive-hyphen-georgian): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus 8d87184b12
gnu: Add texlive-hyphen-galician.
* gnu/packages/tex.scm (texlive-hyphen-galician): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus 28fbf42ae5
gnu: Add texlive-hyphen-friulan.
* gnu/packages/tex.scm (texlive-hyphen-friulan): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus a14ffed231
gnu: Add texlive-hyphen-french.
* gnu/packages/tex.scm (texlive-hyphen-french): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus bac10d8224
gnu: Add texlive-hyphen-finnish.
* gnu/packages/tex.scm (texlive-hyphen-finnish): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus 54ef221c59
gnu: Add texlive-hyphen-ethiopic.
* gnu/packages/tex.scm (texlive-hyphen-ethiopic): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus 5f2294843c
gnu: Add texlive-hyphen-estonian.
* gnu/packages/tex.scm (texlive-hyphen-estonian): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus d7c80395bc
gnu: Add texlive-hyphen-esperanto.
* gnu/packages/tex.scm (texlive-hyphen-esperanto): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus ab8f6de6fe
gnu: Add texlive-hyphen-english.
* gnu/packages/tex.scm (texlive-hyphen-english): New variable.
2019-07-24 09:46:44 +02:00
Ricardo Wurmus 402b835f2b
gnu: Add texlive-hyphen-dutch.
* gnu/packages/tex.scm (texlive-hyphen-dutch): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus 3889b022ca
gnu: Add texlive-hyphen-danish.
* gnu/packages/tex.scm (texlive-hyphen-danish): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus b5b2ef6e3d
gnu: Add texlive-hyphen-czech.
* gnu/packages/tex.scm (texlive-hyphen-czech): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus 9b65c61179
gnu: Add texlive-hyphen-croatian.
* gnu/packages/tex.scm (texlive-hyphen-croatian): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus 1b1d857789
gnu: Add texlive-hyphen-coptic.
* gnu/packages/tex.scm (texlive-hyphen-coptic): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus beed837759
gnu: Add texlive-hyphen-churchslavonic.
* gnu/packages/tex.scm (texlive-hyphen-churchslavonic): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus 9ebce8fc1d
gnu: Add texlive-hyphen-chinese.
* gnu/packages/tex.scm (texlive-hyphen-chinese): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus cbc7e10999
gnu: Add texlive-hyphen-catalan.
* gnu/packages/tex.scm (texlive-hyphen-catalan): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus 7ffc31058c
gnu: Add texlive-hyphen-bulgarian.
* gnu/packages/tex.scm (texlive-hyphen-bulgarian): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus 922667967c
gnu: Add texlive-hyphen-belarusian.
* gnu/packages/tex.scm (texlive-hyphen-belarusian): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus e4c5481df2
gnu: Add texlive-mkpattern.
* gnu/packages/tex.scm (texlive-mkpattern): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus 0ddbc25cbb
gnu: Add texlive-hyphen-basque.
* gnu/packages/tex.scm (texlive-hyphen-basque): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus a361f4128c
gnu: Add texlive-hyphen-armenian.
* gnu/packages/tex.scm (texlive-hyphen-armenian): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus 619ca0230c
gnu: Add texlive-hyphen-ancientgreek.
* gnu/packages/tex.scm (texlive-hyphen-ancientgreek): New variable.
2019-07-24 09:46:43 +02:00
Ricardo Wurmus df73a3d3b6
gnu: Add texlive-hyphen-afrikaans.
* gnu/packages/tex.scm (texlive-hyphen-afrikaans): New variable.
2019-07-24 09:46:42 +02:00
Ricardo Wurmus b8df0d1b16
gnu: Add texlive-tex-ini-files.
* gnu/packages/tex.scm (texlive-tex-ini-files): New variable.
(texlive-generic-tex-ini-files): Deprecate it.
2019-07-24 09:46:42 +02:00
Ricardo Wurmus 2b63e54bf1
gnu: texlive-fonts-cm: Use simple-texlive-package.
* gnu/packages/tex.scm (texlive-fonts-cm): Implement with
simple-texlive-package.
[arguments]: Adjust.
2019-07-24 09:46:42 +02:00
Ricardo Wurmus 0512ae30b3
gnu: texlive-fonts-cm: Remove cm-type1.
These fonts should actually be part of the amsfonts package.

* gnu/packages/tex.scm (texlive-fonts-cm)[arguments]: Do not install cm-type1
fonts.
[native-inputs]: Remove cm-type1 fonts.
2019-07-24 09:46:42 +02:00
Ricardo Wurmus 659fda6cc7
gnu: texlive-dvips: Implement with simple-texlive-package.
* gnu/packages/tex.scm (texlive-dvips): Use simple-texlive-package.
2019-07-24 09:46:42 +02:00
Ricardo Wurmus e68c709179
gnu: Add texlive-dehyph-exptl.
* gnu/packages/tex.scm (texlive-dehyph-exptl): New variable.
(texlive-generic-dehyph-exptl): Deprecate.
2019-07-24 09:46:42 +02:00
Ricardo Wurmus 5153431ca5
gnu: Add texlive-hyph-utf8.
* gnu/packages/tex.scm (texlive-hyph-utf8): New variable.
(texlive-generic-hyph-utf8): Deprecate in favour of texlive-hyph-utf8.
2019-07-24 09:46:42 +02:00
Ricardo Wurmus 92b4a48c91
gnu: Add texlive-hyphen-base.
* gnu/packages/tex.scm (texlive-hyphen-base): New variable.
2019-07-24 09:46:42 +02:00
Ricardo Wurmus 2cece695ba
gnu: Add texlive-unicode-data.
* gnu/packages/tex.scm (texlive-unicode-data): New variable.
(texlive-generic-unicode-data): Deprecate package.
2019-07-24 09:46:38 +02:00
Nicolò Balzarotti 7304d5623a
gnu: julia: Update to 1.1.1.
* gnu/packages/julia.scm (libuv-julia): Update to commit 26dbe56.
(libunwind-for-julia): Remove.
(llvm-patch-url, llvm-patch): New procedures.
(llvm-julia): New variable.
(julia): Update to 1.1.1.
[arguments]: Adjust 'prepare-deps' to new set of dependencies.
Adjust 'hardcode-soname-map': remove openlibm and libfftw handling.
Update file names in 'fix-include-and-link-paths' and 'hardcode-paths'.
Adjust 'disable-broken-tests'.
Pass PREFIX, LIBFLAS, and LIBBLASNAME in #:make-flags; update other
flags.
[inputs]: Replace LLVM-3.9.1 with LLVM-JULIA.  Replace
LIBUNWIND-FOR-JULIA with LIBUNWIND.  Add "rmath" and "libwhich".
[native-inputs]: Remove "unicode-data".

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-07-24 00:31:23 +02:00
Ludovic Courtès 96a9a8d398
gnu: llvm: Add 'system->llvm-target' procedure.
* gnu/packages/llvm.scm (system->llvm-target): New procedure.
2019-07-24 00:31:22 +02:00
Ricardo Wurmus cf4c07b9f1
gnu: Add texlive-hyphen-package.
* gnu/packages/tex.scm (texlive-hyphen-package): New procedure.
2019-07-23 21:43:24 +02:00
Ricardo Wurmus 28e521e960
gnu: Add hyph-utf8-scripts.
* gnu/packages/tex.scm (hyph-utf8-scripts): New variable.
2019-07-23 21:43:24 +02:00
Ricardo Wurmus 8ab600f8c3
gnu: Add simple-texlive-package.
* gnu/packages/tex.scm (simple-texlive-package): New procedure.
2019-07-23 21:43:24 +02:00
Ricardo Wurmus 1a64a7b314
gnu: texlive-union: Build font maps.
* gnu/packages/tex.scm (texlive-union)[arguments]: Execute updmap to generate
missing font maps.
[native-inputs]: Add coreutils, sed, and updmap.cfg.
2019-07-23 21:43:19 +02:00
Efraim Flashner 4d3a2b5ac7
gnu: terminology: Update to 1.5.0.
* gnu/packages/enlightenment.scm (terminology): Update to 1.5.0.
2019-07-23 16:35:51 +03:00
Mathieu Lirzin 6583ef601a
gnu: emacs-request: Update to 0.3.1.
* gnu/packages/emacs-xyz.scm (emacs-request): Update to 0.3.1.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-07-23 10:23:28 +03:00
Mathieu Lirzin d7ab6c9067
gnu: emacs-google-translate: Update to 0.11.18.
* gnu/packages/emacs-xyz.scm (emacs-google-translate): Update to 0.11.18.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-07-23 10:20:47 +03:00
Jack Hill 12cc3da5c1
gnu: mallard-ducktype: Update to 1.0.2.
* gnu/packages/python-xyz.scm (mallard-ducktype) Update to 1.0.2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-07-23 09:10:16 +03:00
Julien Lepiller 3755d5cb5e
gnu: harmonist: Update to 0.2.
* gnu/packages/games.scm (harmonist): Update to 0.2.
2019-07-22 23:10:48 +02:00
Marius Bakke 2698654446
gnu: vlc: Build against libvpx@1.8.
* gnu/packages/video.scm (vlc)[inputs]: Change LIBVPX-1.7 to LIBVPX.
2019-07-22 16:22:22 +02:00
Marius Bakke a242776178
gnu: libvpx: Update to 1.8.1.
* gnu/packages/video.scm (libvpx): Update to 1.8.1.
2019-07-22 16:22:22 +02:00
Marius Bakke fb4ea42340
gnu: zstd: Update to 1.4.1.
* gnu/packages/compression.scm (zstd): Update to 1.4.1.
2019-07-22 16:22:22 +02:00
Marius Bakke ec0de9d8bc
gnu: zstd: Move libraries to separate outputs.
* gnu/packages/compression.scm (zstd)[outputs]: New field.
[arguments]: Add phase 'adjust-libary-locations'.  Pass LIBDIR and INCLUDEDIR
in <#:make-flags>.
* gnu/packages/backup.scm (borg)[inputs]: Change ZSTD to ZSTD:LIB.
* gnu/packages/sync.scm (casync)[inputs]: Likewise.
* gnu/packages/tor.scm (tor)[inputs]: Likewise.
* gnu/packages/linux.scm (btrfs-progs)[inputs]: Likewise.  Add ZSTD:STATIC.
2019-07-22 16:22:22 +02:00
Marius Bakke 8dea61731b
gnu: whois: Update to 5.5.0.
* gnu/packages/networking.scm (whois): Update to 5.5.0.
2019-07-22 16:22:22 +02:00
Marius Bakke 293e4f9f2d
gnu: jsoncpp: Update to 1.9.1.
* gnu/packages/serialization.scm (jsoncpp): Update to 1.9.1.
2019-07-22 16:22:22 +02:00
Marius Bakke 8d3167fe23
gnu: ffmpeg: Update to 4.1.4.
* gnu/packages/video.scm (ffmpeg): Update to 4.1.4.
2019-07-22 16:22:22 +02:00
Marius Bakke 3c08479ef9
gnu: x265: Update to 3.1.1.
* gnu/packages/video.scm (x265): Update to 3.1.1.
2019-07-22 16:22:22 +02:00
Marius Bakke 6a489839a8
gnu: ungoogled-chromium: Enable parallel build.
...but limit the memory usage.  Tested with --cores=8 on a 16 GiB RAM machine.

* gnu/packages/chromium.scm (ungoogled-chromium)[arguments]: Remove <#:parallel-build?>.
Add "jumbo_file_merge_limit=8" in <#:configure-flags>.
2019-07-22 16:22:21 +02:00
Ricardo Wurmus 6fd4c6b267
gnu: htslib: Propagate zlib.
Reported by Vedran Franke <Vedran.Franke@mdc-berlin.de>.

* gnu/packages/bioinformatics.scm (htslib)[inputs]: Move zlib from here...
[propagated-inputs]: ...to here.
2019-07-22 14:24:51 +02:00
Efraim Flashner 1bb4122ce6
gnu: perl-net-http: Update to 6.19.
* gnu/packages/web.scm (perl-net-httpd): Update to 6.19.
2019-07-22 10:14:41 +03:00
Efraim Flashner bbbed2e60d
gnu: perl-test-simple: Update to 1.302164.
* gnu/packages/perl-check.scm (perl-test-simple): Update to 1.302164.
2019-07-22 10:07:57 +03:00
Efraim Flashner 94b9b67618
gnu: perl-cpan-meta: Update to 2.150010.
* gnu/packages/perl.scm (perl-cpan-meta): Update to 2.150010.
2019-07-22 10:07:56 +03:00
Efraim Flashner 6f4d20e387
gnu: perl-clone: Update to 0.42.
* gnu/packages/perl.scm (perl-clone): Update to 0.42.
2019-07-22 10:07:56 +03:00
Efraim Flashner 2756ab8058
gnu: perl-hash-merge: Update to 0.300.
* gnu/packages/perl.scm (perl-hash-merge): Update to 0.300.
[inputs]: Add perl-clone-choose.
2019-07-22 10:07:51 +03:00
Efraim Flashner 5246655fa1
gnu: mallard-ducktype: Run tests.
* gnu/packages/python-xyz.scm (mallard-ducktype)[arguments]: Replace
'check phase to run test suite.
2019-07-22 09:49:19 +03:00
Robert Vollmert 7284b11f6c
gnu: oil-shell: Update to 0.6.0
* gnu/packages/shells.scm (oil-shell): Update to 0.6.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-07-22 09:26:55 +03:00
Chris Marusich afb986e77c
gnu: libreoffice: Fix xdg-open absolute paths.
Fixes: <https://bugs.gnu.org/36728>.

* gnu/packages/libreoffice.scm (libreoffice) [inputs]: Add xdg-utils.
[arguments][#:phases][prepare-src]: Replace hard-coded absolute paths to
xdg-open in the source with the path to xdg-open in the xdg-utils input.
2019-07-21 16:47:55 -07:00
Tobias Geerinckx-Rice d1e766e5c6
gnu: libosinfo: Update to 1.5.0.
* gnu/packages/virtualization.scm (libosinfo): Update to 1.5.0.
[arguments]: Remove ‘disable-broken-test’ phase.
[native-inputs]: Remove check.
2019-07-21 20:27:42 +02:00
Mark H Weaver 59f79254bb
gnu: linux-libre: Update to 5.2.2.
* gnu/packages/linux.scm (linux-libre-5.2-version): Update to 5.2.2.
(linux-libre-5.2-pristine-source): Update hash.
2019-07-21 11:17:43 -04:00
Mark H Weaver c39304ce18
gnu: linux-libre@4.19: Update to 4.19.60.
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.60.
(linux-libre-4.19-pristine-source): Update hash.
2019-07-21 11:17:41 -04:00
Mark H Weaver 267ce6679e
gnu: linux-libre@4.14: Update to 4.14.134.
* gnu/packages/linux.scm (linux-libre-4.14-version): Update to 4.14.134.
(linux-libre-4.14-pristine-source): Update hash.
2019-07-21 11:17:39 -04:00
Mark H Weaver 5d8187c2ac
gnu: linux-libre@4.9: Update to 4.9.186.
* gnu/packages/linux.scm (linux-libre-4.9-version): Update to 4.9.186.
(linux-libre-4.9-pristine-source): Update hash.
2019-07-21 11:17:36 -04:00
Mark H Weaver aa84be4375
gnu: linux-libre@4.4: Update to 4.4.186.
* gnu/packages/linux.scm (linux-libre-4.4-version): Update to 4.4.186.
(linux-libre-4.4-pristine-source): Update hash.
2019-07-21 11:17:34 -04:00
Mark H Weaver 1ad9c105c2
gnu: linux-libre: Deblob the linux-libre source tarball ourselves.
* gnu/packages/linux.scm (linux-libre-deblob-scripts, deblob-scripts-5.2)
(deblob-scripts-4.19, deblob-scripts-4.14, deblob-scripts-4.9)
(deblob-scripts-4.4, computed-origin-method, %upstream-linux-source)
(source-with-patches, make-linux-libre-source, linux-libre-5.2-version)
(linux-libre-5.2-pristine-source, linux-libre-5.2-source)
(linux-libre-4.19-pristine-source, linux-libre-4.19-source)
(linux-libre-4.14-pristine-source, linux-libre-4.14-source)
(linux-libre-4.9-pristine-source, linux-libre-4.9-source)
(linux-libre-4.4-pristine-source, linux-libre-4.4-source)
(linux-libre-pristine-source, linux-libre-source)
(linux-libre-headers-4.9, linux-libre-headers-4.4)
(make-linux-libre-headers*, make-linux-libre*): New variables.
(%linux-libre-version): Rename to ...
(linux-libre-version): ... this, and make it equal to linux-libre-5.2-version.
(%linux-libre-4.19-version, %linux-libre-4.14-version)
(%linux-libre-4.9-version, %linux-libre-4.4-version): Rename to ...
(linux-libre-4.19-version, linux-libre-4.14-version)
(linux-libre-4.9-version, linux-libre-4.4-version): ... these.
(%linux-libre-4.19-hash, %linux-libre-4.19-patches)
(%linux-libre-4.14-hash, %linux-libre-4.14-patches)
(%linux-libre-hash, %linux-libre-5.2-patches): Remove variables.
(make-linux-libre-headers, make-linux-libre): Reformulate in terms of
make-linux-libre-headers* and make-linux-libre*, respectively.
(linux-libre-5.2, linux-libre-4.19, linux-libre-4.14, linux-libre-4.9)
(linux-libre-4.4, linux-libre-arm-veyron, linux-libre-arm-generic)
(linux-libre-arm-generic-4.19, linux-libre-arm-generic-4.14)
(linux-libre-arm-omap2plus, linux-libre-arm-omap2plus-4.19)
(linux-libre-arm-omap2plus-4.14): Adapt and use make-linux-libre*.
(linux-libre-headers-5.2, linux-libre-headers-4.19)
(linux-libre-headers-4.14): Adapt and use make-linux-libre-headers*.
2019-07-21 11:15:56 -04:00
Mark H Weaver 2f4698d7d1
gnu: Add darkice.
* gnu/packages/audio.scm (darkice): New variable.
* gnu/packages/patches/darkice-workaround-fpermissive-error.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2019-07-21 11:12:36 -04:00
Brian Leung 3aec5263a3
gnu: emacs-ivy: Update to 0.12.0.
* gnu/packages/emacs-xyz.scm (emacs-ivy): Update to 0.12.0.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2019-07-21 21:17:47 +08:00
宋文武 a18a27be9f
gnu: Add python-gdal.
For <https://issues.guix.gnu.org/issue/36623>, thank to Arne Babenhauserheide
for the original patch.

* gnu/packages/geo.scm (python-gdal): New package.
2019-07-21 21:04:38 +08:00
Efraim Flashner e6df9c7e85
gnu: qtwebkit: Update to 5.212.0-alpha3.
* gnu/packages/qt.scm (qtwebkit): Update to 5.212.0-alpha3.
2019-07-21 08:46:12 +03:00
Brian Leung 14e0ae7ff7
gnu: Add ghc-hasktags.
* gnu/packages/haskell.scm (ghc-hasktags): New variable.
2019-07-19 23:09:50 -04:00
Brian Leung 37850fb9a0
gnu: Add ghc-microlens-platform.
* gnu/packages/haskell.scm (ghc-microlens-platform): New variable.
2019-07-19 23:09:50 -04:00
Brian Leung 38dd4c1da5
gnu: Add ghc-microlens-ghc.
* gnu/packages/haskell.scm (ghc-microlens-ghc): New variable.
2019-07-19 23:09:50 -04:00
Brian Leung ef803cb520
gnu: Add ghc-microlens-mtl.
* gnu/packages/haskell.scm (ghc-microlens-mtl): New variable.
2019-07-19 23:09:50 -04:00
Brian Leung 64b7c06e18
gnu: Add ghc-hindent.
* gnu/packages/haskell.scm (ghc-hindent): New variable.
2019-07-19 23:09:50 -04:00
Brian Leung 697cae2a67
gnu: Add ghc-exactprint.
* gnu/packages/haskell.scm (ghc-exactprint): New variable.
2019-07-19 23:09:50 -04:00
Brian Leung a60056b5d3
gnu: Add ghc-descriptive.
* gnu/packages/haskell.scm (ghc-descriptive): New variable.
2019-07-19 23:09:49 -04:00
Brian Leung ca20ee07b2
gnu: Add ghc-path-io.
* gnu/packages/haskell.scm (ghc-path-io): New variable.
2019-07-19 23:09:49 -04:00
Brian Leung efc55bf6f3
gnu: Add ghc-path.
* gnu/packages/haskell.scm (ghc-path): New variable.
2019-07-19 23:09:49 -04:00
Brian Leung 51c8370385
gnu: Add ghc-genvalidity-property.
* gnu/packages/haskell.scm (ghc-genvalidity-property): New variable.
2019-07-19 23:09:49 -04:00
Brian Leung 522b61ab80
gnu: Add ghc-genvalidity.
* gnu/packages/haskell.scm (ghc-genvalidity): New variable.
2019-07-19 23:09:49 -04:00
Brian Leung f26f2e757f
gnu: Add ghc-validity.
* gnu/packages/haskell.scm (ghc-validity): New variable.
2019-07-19 23:09:48 -04:00
Giacomo Leidi dd3779c276
gnu: Add emacs-zerodark-theme.
* gnu/packages/emacs-xyz.scm (emacs-zerodark-theme): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-20 01:32:17 +02:00
Ludovic Courtès ddc586ea5c
gnu: python-jupyter-client: Patch file name of 'ip'.
* gnu/packages/python-xyz.scm (python-jupyter-client)[arguments]: Add #:phases.
[inputs]: New field.
2019-07-20 01:32:17 +02:00
Marius Bakke dd9560a050
gnu: glog: Disable test that fails on non-x86_64 platforms.
This was removed in 4678cc46a4, but turned out
to still be needed.

* gnu/packages/logging.scm (glog)[arguments]: New field.
2019-07-19 16:33:54 +02:00
Marius Bakke 4678cc46a4
gnu: glog: Update to 0.4.0.
* gnu/packages/patches/glog-gcc-5-demangling.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/logging.scm (glog): Update to 0.4.0.
[source]: Use GIT-FETCH.
[arguments]: Remove.
2019-07-19 00:02:09 +02:00
Efraim Flashner 262f904ebd
gnu: i2pd: Rewrite 'check phase using with-directory-excursion.
* gnu/packages/i2p.scm (i2pd)[arguments]: In custom 'check phase use
with-directory-excursion to change directory.
2019-07-18 18:52:49 +03:00
Jakob L. Kreuze 2fba90a8b2
gnu: Add i2pd.
[[PGP Signed Part:No public key for F506FD169D8FD95A created at 2019-07-17T20:12:25+0200 using RSA]]
* gnu/packages/i2p.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-18 15:36:58 +02:00
Jakob L. Kreuze f33ee234e5
gnu: Add websocketpp.
* gnu/packages/web.scm (websocketpp): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-18 15:36:58 +02:00
Brian Leung 330a6ff4eb
gnu: Add emacs-ccls.
* gnu/packages/emacs-xyz.scm (emacs-ccls): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-18 15:36:58 +02:00
Brian Leung 0574bc8aa5
gnu: Add emacs-pandoc-mode.
* gnu/packages/emacs-xyz.scm (emacs-pandoc-mode): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-18 15:36:58 +02:00
Brian Leung a513a4cd17
gnu: Add emacs-focus.
* gnu/packages/emacs-xyz.scm (emacs-focus): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-18 15:36:58 +02:00
Brian Leung 8b65299c57
gnu: Add emacs-deadgrep.
* gnu/packages/emacs-xyz.scm (emacs-deadgrep): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-18 15:36:58 +02:00
Brian Leung 6bfb0d5077
gnu: Add emacs-github-review.
* gnu/packages/emacs-xyz.scm (emacs-github-review): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-18 15:36:58 +02:00
Efraim Flashner 0f7b8a7f09
gnu: Add xygrib.
* gnu/packages/geo.scm (xygrib): New variable.
2019-07-18 14:03:02 +03:00
Efraim Flashner 62470a0162
gnu: Add libnova.
* gnu/packages/astronomy.scm (libnova): New variable.
2019-07-18 14:02:47 +03:00
Tobias Geerinckx-Rice 1e73986f44
gnu: bind: Update to 9.14.4.
* gnu/packages/dns.scm (bind): Update to 9.14.4.
2019-07-18 12:57:00 +02:00
Nicolas Goaziou 3c90c57a3b
Revert "gnu: emacs-org: Update to 9.2.4."
This reverts commit 3487533492.

The structure of the tarball is different when obtained from
"https://orgmode.org" and emacs-build-system no longer apply.  Therefore, the
package will not build.

Org has not been updated in ELPA to its latest version (9.2.4); this was
reported upstream.
2019-07-18 10:43:57 +02:00
Kei Kebreau 1fe84f5dd0
gnu: starfighter: Update to 2.0.0.2.
* gnu/packages/games.scm (starfighter): Update to 2.0.0.2.
[source]: Use 'git-fetch' and 'git-file-name'.
[native-inputs]: Add autoconf and automake.
[inputs]: Add pango and sdl2-ttf.
[home-page]: Update project home page.
2019-07-17 22:58:41 -04:00
Marius Bakke 82ccfb1d94
gnu: ungoogled-chromium: Add native Wayland variant.
* gnu/packages/chromium.scm (%preserved-third-party-files): Preserve
"third_party/wayland/wayland_scanner_wrapper.py" and "third_party/wayland-protocols".
(ungoogled-chromium/wayland): New public variable.
2019-07-17 16:30:23 +02:00
Tobias Geerinckx-Rice 243c523946
gnu: emacs-org-contrib: Update to 20190715.
* gnu/packages/emacs-xyz.scm (emacs-org-contrib): Update to 20190715.
2019-07-17 16:03:56 +02:00
Tobias Geerinckx-Rice 3487533492
gnu: emacs-org: Update to 9.2.4.
* gnu/packages/emacs-xyz.scm (emacs-org): Update to 9.2.4.
2019-07-17 16:03:56 +02:00
Tobias Geerinckx-Rice 1d552f636b
gnu: c-reduce: Update to 2.10.0.
* gnu/packages/debug.scm (c-reduce): Update to 2.10.0.
[inputs]: Use default clang & llvm versions (currently 8).
2019-07-17 16:03:56 +02:00
Tobias Geerinckx-Rice ef421791c5
gnu: sord: Propagate serd.
* gnu/packages/rdf.scm (sord)[inputs]: Move serd from here…
[propagated-inputs]: …to here.
2019-07-17 16:03:56 +02:00
Tobias Geerinckx-Rice 746d33847b
gnu: python-pathlib2: Fix synopsis typo.
* gnu/packages/python-xyz.scm (synopsis): Fix typo.
2019-07-17 16:03:55 +02:00
Tobias Geerinckx-Rice b593f264c8
gnu: npth: Update to 1.6.
* gnu/packages/gnupg.scm (npth): Update to 1.6.
2019-07-17 16:03:55 +02:00
Ludovic Courtès 6bfcb72926
gnu: u-boot: Fix target/system comparison in 'make-u-boot-package'.
Until now, running, say:

  guix build -e '(@@ (gnu packages bootloaders) u-boot-a20-olinuxino-micro)' \
    -s armhf-linux

on an x86_64-linux machine wouldn't have the desired effect
because (%current-system) would return "x86_64-linux" when 'same-arch?'
was evaluated.  This fixes that.

* gnu/packages/bootloaders.scm (make-u-boot-package)[same-arch?]: Turn
into a thunk so that (%current-system) is evaluated in the right
context, and adjust callers.  Use 'string=?' instead of 'string-prefix?'.
2019-07-17 15:36:04 +02:00
Jens Mølgaard f5854abc88
gnu: Add readymedia.
* gnu/packages/upnp.scm (readymedia): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-17 15:36:04 +02:00
Jonathan Brielmaier 6a0c6766a4
gnu: telegram-purple: Update to 1.4.1.
* gnu/packages/messaging.scm (telegram-purple): Update to 1.4.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-17 15:36:04 +02:00
Brian Leung 46a3a5b0e6
gnu: emacs-prescient: Update to 3.2.
* gnu/packages/emacs-xyz.scm (emacs-prescient): Update to 3.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-17 15:36:04 +02:00
Brian Leung f385249875
gnu: Add emacs-so-long.
* gnu/packages/emacs-xyz.scm (emacs-so-long): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-17 15:36:04 +02:00
Ludovic Courtès aa856d02b8
gnu: python-ipykernel: Record absolute file name of 'python'.
* gnu/packages/python-xyz.scm (python-ipykernel)[arguments]: Add
'set-python-file-name' phase.
2019-07-17 15:36:04 +02:00
Marius Bakke dcc773e560
gnu: multipath-tools: Update to 0.8.2.
* gnu/packages/linux.scm (multipath-tools): Update to 0.8.2.
2019-07-17 15:11:30 +02:00
Marius Bakke 6f850a19a7
gnu: multipath-tools: Remove Ceph input.
Ceph adds a massive dependency for a little-used feature.  It was mainly added
because the build-system previously could not cope with librados being missing.

* gnu/packages/linux.scm (multipath-tools)[inputs]: Remove CEPH:LIB.
2019-07-17 15:11:30 +02:00
Danny Milosavljevic fe9c5b1dad
gnu: python-swagger-spec-validator: Update to 2.4.3.
* gnu/packages/python-xyz.scm (python-swagger-spec-validator): Update to
2.4.3.
[native-inputs]: Add python-pyyaml.
2019-07-17 12:29:49 +02:00
Danny Milosavljevic d1b103e14b
gnu: Add python-flask-htpasswd.
* gnu/packages/python-web.scm (python-flask-htpasswd): New variable.
2019-07-17 11:50:18 +02:00
Jelle Licht d376129f0b
gnu: Add network-manager-vpnc.
* gnu/packages/gnome.scm (network-manager-vpnc): New variable.
2019-07-17 11:08:48 +02:00
Jelle Licht 633422b0e6
gnu: network-manager-openvpn: Patch hardcoded paths.
* gnu/packages/gnome.scm (network-manager-openvpn)[arguments]: Add custom
'patch-path' phase to replace references to openvpn and modprobe.
[inputs]: Add kmod.
2019-07-17 11:08:43 +02:00
Jelle Licht d9af93c4ea
gnu: network-manager-openvpn: Pass '--localstatedir=/var'.
* gnu/packages/gnome.scm (network-manager-openvpn)[arguments]: Pass
'--localstatedir=/var' to #:configure-flags.
2019-07-17 11:08:31 +02:00
Tomáš Čech 7d1861e2d2
gnu: network-manager: Fix plugin loading problem.
* gnu/packages/patches/nm-plugin-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnome.scm (network-manager)[source](patches): New field.

Signed-off-by: Jelle Licht <jlicht@fsfe.org>
2019-07-17 11:07:43 +02:00
Arun Isaac e13714b642
gnu: Add gnaural.
* gnu/packages/audio.scm (gnaural): New variable.
2019-07-17 12:50:39 +05:30
Tobias Geerinckx-Rice 214cbec2cf
gnu: msmtp: Update to 1.8.5.
* gnu/packages/mail.scm (msmtp): Update to 1.8.5.
2019-07-16 23:50:50 +02:00
Tobias Geerinckx-Rice fcc6503d73
gnu: mpop: Update to 1.4.5.
* gnu/packages/mail.scm (mpop): Update to 1.4.5.
2019-07-16 23:50:50 +02:00
Tobias Geerinckx-Rice e7597aad86
gnu: qjackctl: Update to 0.5.9.
* gnu/packages/audio.scm (qjackctl): Update to 0.5.9.
2019-07-16 23:32:01 +02:00
Tobias Geerinckx-Rice 5e4cb92ee8
gnu: qsynth: Update to 0.5.7.
* gnu/packages/audio.scm (qsynth): Update to 0.5.7.
[arguments]: Remove CXXFLAGS=-std=gnu++11 #:configure-flag.
2019-07-16 23:32:01 +02:00
Tobias Geerinckx-Rice 12c8c997e7
gnu: qsynth: Use newer (HTTPS) home page.
* gnu/packages/audio.scm (qsynth)[home-page]: Update.
2019-07-16 23:32:01 +02:00
Paul Garlick 37dc29200c
gnu: Add opencascade-occt.
* gnu/packages/maths.scm (opencascade-occt): New variable.
2019-07-16 22:19:26 +01:00
Tobias Geerinckx-Rice 844cb1b64d
gnu: osc: Update to 0.165.2.
* gnu/packages/build-tools.scm (osc): Update to 0.165.2.
2019-07-16 23:00:10 +02:00
Tobias Geerinckx-Rice c8a227dfea
gnu: gap: Update to 4.10.2.
* gnu/packages/algebra.scm (gap): Update to 4.10.2.
2019-07-16 23:00:10 +02:00
Tobias Geerinckx-Rice 66d6b7c3e9
gnu: font-google-noto: Update to 20171025.
* gnu/packages/fonts.scm (font-google-noto): Update to 20171025.
2019-07-16 23:00:10 +02:00
Tobias Geerinckx-Rice c8ae38d389
gnu: r-pmcmr: Fix description.
* gnu/packages/cran.scm (r-pmcmr)[description]: Use ‘dependent’.
2019-07-16 23:00:10 +02:00
Tobias Geerinckx-Rice 4a635d3d6e
gnu: hdup: Use archived home page.
* gnu/packages/backup.scm (hdup)[home-page]: Load from archive.org.
2019-07-16 23:00:10 +02:00
Tobias Geerinckx-Rice 61ea54e7c0
gnu: mercurial: Update to 5.0.2.
* gnu/packages/version-control.scm (mercurial): Update to 5.0.2.
2019-07-16 23:00:09 +02:00
Tobias Geerinckx-Rice a8ebf57cf5
gnu: pari-gp: Update to 2.11.2.
* gnu/packages/algebra.scm (pari-gp): Update to 2.11.2.
2019-07-16 23:00:09 +02:00
Tobias Geerinckx-Rice 45dbc1b2dd
gnu: xauth: Update to 1.1.
* gnu/packages/xorg.scm (xauth): Update to 1.1.
2019-07-16 23:00:09 +02:00
Tobias Geerinckx-Rice a71d42bc30
gnu: gp2c: Update to 0.0.11pl2.
* gnu/packages/algebra.scm (gp2c): Update to 0.0.11pl2.
2019-07-16 23:00:09 +02:00
Tobias Geerinckx-Rice fcf82fd314
gnu: jekyll: Update to 3.8.6.
* gnu/packages/ruby.scm (jekyll): Update to 3.8.6.
2019-07-16 23:00:09 +02:00
Timothy Sample 71e5d425c9
gnu: ghc-clock-bootstrap: Move and inherit from ghc-clock.
Fixes <https://bugs.gnu.org/36084>.

* gnu/packages/haskell-check.scm (ghc-clock-bootstrap): Move this...
* gnu/packages/haskell.scm (ghc-clock-bootstrap): ...here and inherit
from ghc-clock (which implies updating to version 0.7.2).

Co-authored-by: Robert Vollmert <rob@vllmrt.net>
2019-07-16 14:43:03 -04:00
Carl Dong 6869b6635a
gnu: Allow building toolchain with non-default libc.
* gnu/packages/base.scm (make-gcc-libc): Make public.
* gnu/packages/commencement.scm (make-gcc-toolchain): Add 'libc'
  optional argument to specify using a non-default glibc package, also
  make public.
2019-07-16 11:13:15 -04:00
Marius Bakke d4cafcaf30
gnu: ungoogled-chromium: Update to 75.0.3770.142 [security fixes].
This fixes CVE-2019-972921 and CVE-2019-951487.

* gnu/packages/chromium.scm (%chromium-version): Set to 75.0.3770.142.
(%chromium-origin): Update hash.
2019-07-16 17:06:41 +02:00
Ricardo Wurmus 34c2a16b10
gnu: python-matplotlib: Do not propagate GTK+ or python-pyqt.
* gnu/packages/python-xyz.scm (python-matplotlib)[propagated-inputs]: Remove
gtk+ and python-pyqt.
[arguments]: Adjust configure-environment phase.
2019-07-16 17:03:19 +02:00
Nicolas Goaziou 84d7784afe
gnu: snap: Update to 5.0.4.
* gnu/packages/education.scm (snap): Update to 5.0.4.
2019-07-16 14:34:45 +02:00
Robert Vollmert 848862f029
gnu: rust-proc-macro2: Update to 0.4.30.
* gnu/packages/crates-io.scm (rust-proc-macro2): Update to 0.4.30.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2019-07-16 09:53:51 +02:00
Efraim Flashner 857ff51562
gnu: direvent: Update to 5.2.
* gnu/packages/admin.scm (direvent): Update to 5.2.
2019-07-16 09:40:57 +03:00
Mark H Weaver 5b524f448c
gnu: linux-libre: Update to 5.2.1.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.2.1.
(%linux-libre-hash): Update hash.
2019-07-15 15:26:40 -04:00
Mark H Weaver ec92941a82
gnu: linux-libre@4.19: Update to 4.19.59.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.59.
(%linux-libre-4.19-hash): Update hash.
2019-07-15 15:25:19 -04:00
Marius Bakke 6e00b1ea62
gnu: python-cachecontrol: Do not use unstable source archive.
* gnu/packages/python-web.scm (python-cachecontrol)[source]: Change to GIT-FETCH.
2019-07-15 20:38:00 +02:00
Efraim Flashner 9db2cad68d
gnu: uim-qt: Build with qt-5 support.
* gnu/packages/xorg.scm (uim-qt)[inputs]: Remove qt@4.  Add qtbase,
qtx11extras.
[arguments]: Replace qt4 configure flags with qt5 configure flags.
2019-07-15 21:17:26 +03:00
Ludovic Courtès e8fc56a3d2
gnu: open-zwave: Use the bundled TinyXML.
* gnu/packages/zwave.scm (open-zwave)[source](snippet): Remove code to
use our own TinyXML.
[inputs]: Remove TINYXML.
2019-07-15 18:27:23 +02:00
Rutger Helling e6bd575a72
gnu: swayidle: Update to 1.5.
* gnu/packages/wm.scm (swayidle): Update to 1.5.
2019-07-15 14:22:24 +02:00
Rutger Helling 6862766cf2
gnu: openrct2: Update to 0.2.3.
* gnu/packages/games.scm (openrct2): Update to 0.2.3.
2019-07-15 14:22:24 +02:00
Arne Babenhauserheide bd105b78b0
gnu: python-aiorpcx: capitalize description
* gnu/packages/python-web.scm (python-aiorpcx): capitalize description

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-15 12:48:49 +02:00
Arne Babenhauserheide eb71211478
gnu: python-aiohttp: Update to 3.5.4
* gnu/packages/python-web.scm (python-aiohttp): Update to 3.5.4.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-15 12:48:49 +02:00
Arne Babenhauserheide c31302fda7
gnu: python-aiorpcx: Update to 0.18.3
* gnu/packages/python-web.scm (python-aiorpcx): Update to 0.18.3

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-15 12:48:49 +02:00
Guillaume Le Vaillant cb45aad9b0
gnu: monero: Make tests more verbose.
Increase the verbosity of the 'check' phase to prevent 'core_tests' from
hitting 'max-silent-timeout'.

* gnu/packages/finance.scm (monero)[arguments]: Add '--verbose' option to
  'check' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-15 12:48:49 +02:00
Ricardo Wurmus 886986b744
gnu: Add python-ont-fast5-api.
* gnu/packages/bioinformatics.scm (python-ont-fast5-api): New variable.
2019-07-15 12:18:01 +02:00
Ricardo Wurmus d71d85cd17
gnu: Add python-progressbar33.
* gnu/packages/python-xyz.scm (python-progressbar33): New variable.
2019-07-15 12:18:01 +02:00
Efraim Flashner 64ed7c2258
gnu: rkflashtool: Update to 5.2-1.8966c4e.
* gnu/packages/flashing-tools.scm (rkflashtool): Update to 5.2-1.8966c4e.
[version]: Use 'git-version'.
[source]: Use 'git-file-name'.
2019-07-15 12:10:32 +03:00
Ludovic Courtès 266e54e2ac
gnu: guile-bootstrap: Use the new 'derivation' calling convention.
* gnu/packages/bootstrap.scm (raw-build): In 'derivation' call,
distinguish #:inputs from #:sources, passing a list of
<derivation-input> as #:inputs.
2019-07-15 10:01:05 +02:00
Pierre Langlois 2f3c0fb39d
gnu: linux-libre: Fix build on aarch64.
* gnu/packages/linux.scm (make-linux-libre)[arguments]: Remove
'work-around-gcc-7-include-path-issue phase.
2019-07-14 15:04:41 -04:00
Mark H Weaver be7eebe26d
gnu: linux-libre: Update to 5.2.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.2.
(%linux-libre-hash): Update hash.
* linux-libre-5.1: Rename to ...
* linux-libre-5.2: ... this.  Use %linux-libre-5.2-patches.
* linux-libre: Switch to linux-libre-5.2.
* linux-libre-arm-veyron, linux-libre-arm-generic, linux-libre-arm-omap2plus:
Use %linux-libre-5.2-patches.
* linux-libre-headers-5.1: Rename to ...
* linux-libre-headers-5.2: ... this.
* %linux-libre-5.1-patches: Rename to ...
* %linux-libre-5.2-patches: ... this.
* gnu/packages/aux-files/linux-libre/5.1-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.1-arm.conf,
gnu/packages/aux-files/linux-libre/5.1-arm64.conf,
gnu/packages/aux-files/linux-libre/5.1-i686.conf,
gnu/packages/aux-files/linux-libre/5.1-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/5.2-arm-veyron.conf,
gnu/packages/aux-files/linux-libre/5.2-arm.conf,
gnu/packages/aux-files/linux-libre/5.2-arm64.conf,
gnu/packages/aux-files/linux-libre/5.2-i686.conf,
gnu/packages/aux-files/linux-libre/5.2-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Update accordingly.
2019-07-14 15:02:45 -04:00
Arun Isaac 3c6d7fa842
gnu: Add emacs-elpher.
* gnu/packages/emacs-xyz.scm (emacs-elpher): New variable.
2019-07-14 20:14:35 +05:30
Rutger Helling 39a20acc06
gnu: nzbget: Update to 21.0.
* gnu/packages/networking.scm (nzbget): Update to 21.0.
2019-07-14 15:55:47 +02:00
Efraim Flashner 041e03847b
gnu: Add evisum.
* gnu/packages/enlightenment.scm (evisum): New variable.
2019-07-14 11:02:23 +03:00
Christopher Baines bee9f97e0a
gnu: Add s-tui.
* gnu/packages/admin.scm (s-tui): New variable.
2019-07-13 23:18:54 +01:00
Ricardo Wurmus 29fe71152f
gnu: python-rpy2: Update to 3.0.4-1.19868a8.
* gnu/packages/statistics.scm (python-rpy2): Update to 3.0.4-1.19868a8.
[source]: Fetch from repository.
[propagated-inputs]: Add python-cffi, python-numpy, python-pandas,
python-ipython, and python-tzlocal.
[native-inputs]: Add python-pytest.
[arguments]: Set TZ variable and use pytest to run the tests.
2019-07-13 23:50:01 +02:00
Hartmut Goebel 6b61dea336
gnu: Add pngquant.
* gnu/packages/image.scm (pngquant): New variable.
2019-07-13 20:04:44 +02:00
Hartmut Goebel 8db1bd188b
gnu: Add libimagequant.
* gnu/packages/image.scm (libimagequant): New variable.
2019-07-13 20:04:44 +02:00
Jacob MacDonald f24276de9a
gnu: docker-compose: Update to 1.24.1.
* gnu/packages/docker.scm (docker-compose): Update to 1.24.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald 3146b6da6d
gnu: python-docker-py: Update to 3.7.3.
* gnu/packages/docker.scm (python-docker-py): Update to 3.7.3.
[inputs]: Use PYTHON-REQUESTS-2.20 instead of PYTHON-REQUESTS.
Add PYTHON-DOCKER-PYCREDS, PYTHON-IPADDRESS, PYTHON-PARAMIKO, and
PYTHON-URLLIB3-1.24.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald 8bb591d426
gnu: python-dockerpty: Update to 0.4.1.
* gnu/packages/docker.scm (python-dockerpty): Update to 0.4.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald d59d56b2ad
gnu: python-docker-pycreds: Update to 0.4.0.
* gnu/packages/docker.scm (python-docker-pycreds): Update to 0.4.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald 52cc489292
gnu: python-texttable: Update to 0.9.1.
* gnu/packages/python-xyz.scm (python-texttable): Update to 0.9.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald 97f0bd7d68
gnu: Add python-requests-2.20.
* gnu/packages/python-web.scm (python-requests-2.20): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald a76e6a690f
gnu: Add python-idna-2.7.
* gnu/packages/python-xyz.scm (python-idna-2.7): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:53 +02:00
Jacob MacDonald 7deb086864
gnu: Add python-urllib3-1.24.
* gnu/packages/python-web.scm (python-urllib3-1.24): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:52 +02:00
Jacob MacDonald e308b4f06a
gnu: Add python-cached-property.
* gnu/packages/python-xyz.scm (python-cached-property): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-13 15:13:52 +02:00
Ludovic Courtès 86b0b7917f
gnu: rush: Update to 2.1.
* gnu/packages/rush.scm (rush): Update to 2.1.
2019-07-13 15:13:52 +02:00
Ricardo Wurmus c1b87329bf
gnu: pigx-rnaseq: Update to 0.0.10.
* gnu/packages/bioinformatics.scm (pigx-rnaseq): Update to 0.0.10.
2019-07-13 13:51:52 +02:00
Tobias Geerinckx-Rice 2516ba81be
gnu: wcslib: Update to 6.2.
* gnu/packages/astronomy.scm (wcslib): Update to 6.2.
[arguments]: Add #:configure-flags to find CFITSIO.
2019-07-13 00:20:21 +02:00
Tobias Geerinckx-Rice 7fc2d3a92d
gnu: wcslib: Don't use NAME in source URI.
* gnu/packages/astronomy.scm (wcslib)[source]: Hard-code NAME.
2019-07-13 00:20:21 +02:00
Arne Babenhauserheide 17f90b679f
gnu: guile-wisp: fix url
* gnu/packages/guile-xyz.scm (guile-wisp): add www to url (required due to hoster-changes)

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-12 23:54:19 +02:00
Arne Babenhauserheide 65610f7326
gnu: wisp: update to 1.0.2.
* gnu/packages/guile-xyz (wisp): update to version 1.0.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-12 23:54:19 +02:00
Timotej Lazar 9d34cc133f
gnu: cmus: Support AAC format.
* gnu/packages/music.scm (cmus)[inputs]: Add faad2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-12 23:54:19 +02:00
Oleg Pykhalov 6cf63fe887
gnu: Add emacs-gitlab-ci-mode.
* gnu/packages/emacs-xyz.scm (emacs-gitlab-ci-mode): New variable.
2019-07-13 00:22:55 +03:00
Oleg Pykhalov 5516a75b0b
gnu: Add emacs-matcha.
* gnu/packages/emacs-xyz.scm (emacs-matcha): New variable.
2019-07-13 00:22:52 +03:00
Leo Famulari dd9c137b2c
gnu: Blender: Update to 2.80-rc1.
* gnu/packages/graphics.scm (blender): Update to 2.80-rc1.
2019-07-12 15:58:44 -04:00
Leo Famulari 04d52b1a95
gnu: OpenImageIO: Update to 1.8.17.
* gnu/packages/graphics.scm (openimageio): Update to 1.8.17.
(openimageio-1.7): New variable.
(blender-2.79)[inputs]: Use openimageio-1.7.
2019-07-12 15:58:41 -04:00
Arun Isaac 7f1c69f5d3
gnu: Add aptdec.
* gnu/packages/ham-radio.scm (aptdec): New variable.
2019-07-12 22:44:55 +05:30
Tanguy Le Carrour 90bb244f29
gnu: Add grisbi.
* gnu/packages/finance.scm (grisbi): New variable.

Signed-off-by: Timothy Sample <samplet@ngyro.com>
2019-07-12 12:05:00 -04:00
Tobias Geerinckx-Rice ca31f76b86
gnu: rust: Fix hash.
I don't know what the previous hash described, but the signature on this
one is valid.

* gnu/packages/rust.scm (rust)[source]: Update hash.
2019-07-12 14:55:11 +02:00
Ivan Petkov f67f93b6d6
gnu: rust: Update to 1.36.0.
* gnu/packages/rust.scm (rust): Rename to...
(rust-1.35): ...this.
(rust): New variable.
2019-07-11 20:18:07 -07:00
Leo Famulari 14727aaa03
gnu: certbot, python-acme: Update to 0.35.1.
* gnu/packages/tls.scm (certbot, python-acme): Update to 0.35.1.
2019-07-11 20:17:54 -04:00
Jack Hill 5a836ce38c
gnu: expat: fix CVE-2018-20843
* gnu/packages/xml.scm (expat)[replacement]: New field.
(expat/fixed): New variable.
* gnu/packages/patches/expat-CVE-2018-20843.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch file.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-07-12 00:39:01 +02:00
Jack Hill f85c8dd8ae
gnu: expat: Add additional source URI
The expat sourceforge page announces that the project is in the process of
moving to GitHub.

* gnu/packages/xml.scm (expat)[source]: Add GitHub URI.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2019-07-12 00:39:01 +02:00
Ricardo Wurmus c5ac35d750
gnu: mumi: Update to 0.0.0-4.ea0a28f.
* gnu/packages/mail.scm (mumi): Update to 0.0.0-4.ea0a28f.
2019-07-11 23:48:08 +02:00
Pierre Langlois c894b80324
gnu: sbcl-clx: Update to 0.7.5.
* gnu/packages/lisp.scm (sbcl-clx): Update to 0.7.5.
[origin]: Drop "clx-remove-demo.patch" and the snippet that removes demo code.
* gnu/packages/patches/clx-remove-demo.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-07-11 23:15:00 +02:00
Ludovic Courtès 3fb666bd40
gnu: pies: Update to 1.4.
* gnu/packages/admin.scm (pies): Update to 1.4.
[arguments]: Modify /bin/sh reference in src/comp.c as well.
2019-07-11 23:13:27 +02:00
Marius Bakke 878a6baa4c
Merge branch 'staging' 2019-07-11 20:33:44 +02:00
Mark H Weaver 1c65b0e9d5
gnu: linux-libre: Update to 5.1.17.
* gnu/packages/linux.scm (%linux-libre-version): Update to 5.1.17.
(%linux-libre-hash): Update hash.
2019-07-11 12:16:40 -04:00
Mark H Weaver cba1dc68da
gnu: linux-libre@4.19: Update to 4.19.58.
* gnu/packages/linux.scm (%linux-libre-4.19-version): Update to 4.19.58.
(%linux-libre-4.19-hash): Update hash.
2019-07-11 12:15:47 -04:00
Mark H Weaver 783ebb961e
gnu: linux-libre@4.14: Update to 4.14.133.
* gnu/packages/linux.scm (%linux-libre-4.14-version): Update to 4.14.133.
(%linux-libre-4.14-hash): Update hash.
2019-07-11 12:14:56 -04:00