Commit Graph

13632 Commits

Author SHA1 Message Date
David Craven 22897187c1
gnu: llvm: Enable install utils.
* gnu/packages/llvm.scm (llvm)[arguments]: Add -DLLVM_INSTALL_UTILS=ON
  to configure-flags.
2016-12-14 16:30:42 +01:00
Leo Famulari 7ab3ea4266
gnu: nss, nss-certs: Update to 3.27.2.
* gnu/packages/gnuzilla.scm (nss): Update to 3.27.2.
* gnu/packages/certs.scm (nss-certs): Update to 3.27.2.
2016-12-14 10:19:32 -05:00
Leo Famulari 5ac6b841c2
gnu: icedtea-8: Update to 3.2.0 [fixes CVE-2016-{5542,5554,5568,5573,5582,5597}].
* gnu/packages/java.scm (icedtea-8): Update to 3.2.0.
[arguments]: Pass '--disable-system-pcsc' and '--disable-system-sctp'
to #:configure-flags.
2016-12-14 10:19:32 -05:00
Leo Famulari ab129dac7d
gnu: icedtea-7: Update to 2.6.8 [fixes CVE-2016-{5542,5554,5568,5573,5582,5597}]
* gnu/packages/java.scm (icedtea-7): Update to 2.6.8.
2016-12-14 10:19:29 -05:00
Marius Bakke 497355dc09
gnu: python-nbconvert: Disable tests.
* gnu/packages/python.scm (python-nbconvert, python2-nbconvert)[arguments]:
Set #:tests? #f.
[native-inputs]: Add python-pytest.
2016-12-14 12:59:40 +01:00
Marius Bakke 63b02364aa
gnu: python-iso8601: Fix test dependencies.
* gnu/packages/python.scm (python-iso8601, python2-iso8601)[native-inputs]:
  Add python-pytest.
2016-12-14 12:47:22 +01:00
Marius Bakke 55ab64516b
gnu: python-django-filter: Fix test suite.
* gnu/packages/django.scm (python-django-filter,
  python2-django-filter)[arguments]: Replace 'check' phase with custom command.
2016-12-14 12:43:36 +01:00
Marius Bakke 281cc11c8e
gnu: python-django-simple-math-captcha: Disable tests.
* gnu/packages/django.scm (python-django-simple-math-captcha,
  python2-django-simple-math-captcha)[arguments]: Set #:tests? #f.
2016-12-14 12:40:13 +01:00
Marius Bakke ea8907c5d5
gnu: python-mox3: Disable tests.
* gnu/packages/openstack.scm (python-mox3, python2-mox3)[arguments]: Disable
  tests.
  [native-inputs]: Add python-oslosphinx and python-sphinx.
2016-12-14 12:02:45 +01:00
Ben Woodcroft ce3f92e701
gnu: Add r-bit64.
* gnu/packages/statistics.scm (r-bit64): New variable.
2016-12-14 20:43:28 +10:00
Ben Woodcroft 42066e6b4a
gnu: Add r-bit.
* gnu/packages/statistics.scm (r-bit): New variable.
2016-12-14 20:43:28 +10:00
Marius Bakke 2ff4559b49
gnu: python-hacking: Disable tests.
* gnu/packages/openstack.scm (python-hacking, python2-hacking)[arguments]:
Set #:tests? #f.
2016-12-14 11:40:34 +01:00
Marius Bakke a717e8a698
gnu: python-flake8-2.2.4: Disable tests.
* gnu/packages/python.scm (python-flake8-2.2.4,
  python2-flake8-2.2.4)[arguments]: Set #:tests? #f.
2016-12-14 11:40:25 +01:00
Marius Bakke 73e3060d57
gnu: python-pep8-1.5.7: Disable tests.
* gnu/packages/python.scm (python-pep8-1.5.7, python2-pep8-1.5.7)[arguments]:
Set #:tests? #f.
2016-12-14 11:21:50 +01:00
Marius Bakke 0d84e1ef22
gnu: python-pyflakes-0.8.1: Disable tests.
* gnu/packages/python.scm (python-pyflakes-0.8.1,
  python2-pyflakes-0.8.1)[arguments]: Set #:tests? #f.
2016-12-14 11:19:11 +01:00
Marius Bakke 90110ef956
gnu: python-testrepository: Disable tests.
* gnu/packages/python.scm (python-testrepository, python2-testrepository):
Set #:tests? #f.
2016-12-14 10:46:47 +01:00
Marius Bakke f6c1ef1804
gnu: python-fixtures: Fix test suite.
* gnu/packages/python.scm (python-fixtures, python2-fixtures): Replace 'check'
  with custom phase.
  [native-inputs]: Add python-mock.
2016-12-14 10:40:21 +01:00
Marius Bakke fb08c4fedc
gnu: python-psutil: Disable tests.
* gnu/packages/python.scm (python-psutil, python2-psutil): Disable tests.
2016-12-14 10:18:33 +01:00
Mark H Weaver 5a3849443a
gnu: linux-libre: Update to 4.9.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.9.
* gnu/packages/linux-libre-4.8-x86_64.conf,
gnu/packages/linux-libre-4.8-i686.conf: Delete files.
* gnu/packages/linux-libre-4.9-x86_64.conf,
gnu/packages/linux-libre-4.9-i686.conf: New files.
* Makefile.am (KCONFIGS): Update accordingly.
2016-12-14 03:27:26 -05:00
Ludovic Courtès 4fbd0f4f86
gnu: guile-next: Update to 2.1.5.
* gnu/packages/guile.scm (guile-next): Update to 2.1.5.
[properties]: Add 'upstream-name', 'ftp-server', and 'ftp-directory'.
2016-12-14 08:48:38 +01:00
Leo Famulari 9d3a15b496
gnu: python-sphinx-rtd-theme: Build with python-sphinx.
* gnu/packages/python.scm (python-sphinx-rtd-theme,
python2-sphinx-rtd-theme)[propagated-inputs]: Add python-sphinx.
2016-12-13 20:54:34 -05:00
Leo Famulari 2b9e4bead9
gnu: python-zope-schema: Build with python-zope-exceptions.
* gnu/packages/python.scm (python-zope-schema,
python2-zope-schema)[propagated-inputs]: Add python-zope-schema.
2016-12-13 20:54:29 -05:00
Ludovic Courtès e8a463e646
gnu: usbutils: Update to 008.
* gnu/packages/linux.scm (usbutils): Update to 008.
[inputs]: Add EUDEV.
2016-12-14 00:22:49 +01:00
Ludovic Courtès 3232613e63
gnu: wireless-regdb: Update to 2016.06.10.
* gnu/packages/linux.scm (wireless-regdb): Update to 2016.06.10.
2016-12-14 00:22:49 +01:00
Christopher Baines 4b41febf9c
services: mysql: Add port to configuration
* gnu/services/databases.scm (<mysql-configuration>): Add port field.
(mysql-configuration-file): Use the port field when creating the
configuration file.
* doc/guix.texi (Database Services): Document it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-12-14 00:22:49 +01:00
Marius Bakke a792e1aa8d
gnu: python-cairocffi: Disable tests.
* gnu/packages/python.scm (python-cairocffi, python2-cairocffi)[arguments]:
Set #:tests? #f.
2016-12-13 17:04:20 -05:00
Marius Bakke 6734c7bae3
gnu: python-cairocffi: Use 'modify-phases' syntax.
* gnu/packages/python.scm (python-cairocffi)[arguments]: Use 'modify-phases'.
2016-12-13 17:04:20 -05:00
Marius Bakke e2816ac72d
gnu: python-xcffib: Disable tests.
* gnu/packages/python.scm (python-xcffib, python2-xcffib)[arguments]:
Set #:tests? #f.
2016-12-13 17:04:20 -05:00
Marius Bakke c8cd850c87
gnu: python-xcffib: Use 'modify-phases' syntax.
* gnu/packages/python.scm (python-xcffib)[arguments]: Use 'modify-phases'.
2016-12-13 17:04:19 -05:00
Marius Bakke cff0ccf9dc
gnu: python-requests: Disable tests.
* gnu/packages/python.scm (python-requests, python2-requests,
python-requests-2.7)[native-inputs]: Remove field.
[arguments]: New field. Set #:tests? #f.
2016-12-13 17:04:19 -05:00
Marius Bakke 97be1bc231
gnu: python-click: Fix tests.
* gnu/packages/python.scm (python-click, python2-click)[arguments]: Replace
'check' with custom phase.
[native-inputs]: Add python-pytest.
2016-12-13 17:04:19 -05:00
Marius Bakke 3fe2c209e0
gnu: python-tornado: Disable tests.
* gnu/packages/python.scm (python-tornado, python2-tornado)[arguments]:
Set #:tests? #f.
2016-12-13 17:04:19 -05:00
Marius Bakke 03cb5f9edb
gnu: python-sphinx: Disable tests.
* gnu/packages/python.scm (python-sphinx, python2-sphinx)[arguments]:
Set #:tests? #f.
2016-12-13 17:04:18 -05:00
Marius Bakke 995cb99e4b
gnu: python-pygments: Disable tests.
* gnu/packages/python.scm (python-pygments, python2-pygments)[arguments]:
Set #:tests? #f.
2016-12-13 17:04:18 -05:00
Marius Bakke bd10e677d1
gnu: python-coverage: Disable tests.
* gnu/packages/python.scm (python-coverage, python2-coverage)[arguments]:
Set #:tests? #f.
2016-12-13 17:04:18 -05:00
Marius Bakke 4fd129ee86
gnu: python-six: Fix test dependencies.
* gnu/packages/python.scm (python-six, python2-six)[native-inputs]: Add
python-py and python-pytest.
2016-12-13 17:04:18 -05:00
Marius Bakke dcb0da7bff
gnu: python-py: Disable tests.
* gnu/packages/python.scm (python-py, python2-py)[arguments]: Set #:tests? #f.
2016-12-13 21:04:31 +01:00
Marius Bakke 3f1b4bc316
gnu: xf86-input-keyboard: Update to 1.9.0.
* gnu/packages/xorg.scm (xf86-input-keyboard): Update to 1.9.0.
2016-12-13 20:39:01 +01:00
Marius Bakke 12f3af5f1a
gnu: xf86-video-ati: Update to 7.8.0.
* gnu/packages/xorg.scm (xf86-video-ati): Update to 7.8.0.
2016-12-13 20:37:13 +01:00
Marius Bakke 546856a3de
gnu: xf86-input-libinput: Update to 0.23.0.
* gnu/packages/xorg.scm (xf86-input-libinput): Update to 0.23.0.
2016-12-13 20:31:29 +01:00
Tobias Geerinckx-Rice d7f84eab02
gnu: iproute2: Update to 4.9.0.
* gnu/packages/linux.scm (iproute2): Update to 4.9.0.
[home-page]: Point to the latest attempt, and use HTTPS.
2016-12-13 19:32:34 +01:00
Alex Kost bee075e706
gnu: libjpeg-turbo: Fix typo.
This is a followup to commit e90a706e16.

* gnu/packages/image.scm (libjpeg-turbo): Remove extra "\".
2016-12-13 19:56:07 +03:00
Ludovic Courtès 1975ec69e7
gnu: epic5: Fix 'license' field to contain only licenses.
* gnu/packages/irc.scm (epic5)[license]: Call 'license:non-copyleft'.
2016-12-13 17:24:30 +01:00
Efraim Flashner 1d0814670c
gnu: python-pyqt: Update to 5.7.
* gnu/packages/qt.scm (python-pyqt): Update to 5.7.
2016-12-13 15:11:25 +02:00
Efraim Flashner e5a12fba82
gnu: onionshare: Update to 0.9.2 (fixes CVE-2016-5026).
* gnu/packages/tor.scm (onionshare): Update to 0.9.2.
[source]: Remove patch.
[arguments]: Update substitutions for new version.
* gnu/packages/patches/onionshare-fix-install-paths.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-12-13 13:12:31 +02:00
Ben Woodcroft 991e143d25
gnu: diamond: Update to 0.8.29.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.29.
2016-12-13 20:01:56 +10:00
Ben Woodcroft ced1c496aa
gnu: orfm: Update to 0.6.1.
* gnu/packages/bioinformatics.scm (orfm): Update to 0.6.1.
2016-12-13 20:00:50 +10:00
Efraim Flashner 310248c621
gnu: libsrtp: Fix building on mips.
* gnu/packages/telephony.scm (libsrtp)[arguments]: Add substitution
changing variable name from 'mips' to 'mips_value'. Also substitute
dictionary location in test suite.
2016-12-13 11:15:49 +02:00
Efraim Flashner 6f09178d2a
gnu: libsrtp: Have source use file-name.
* gnu/packages/telephony.scm (libsrtp)[source]: Add file-name field.
2016-12-13 11:15:48 +02:00
Efraim Flashner e90a706e16
gnu: libjpeg-turbo: Fix build on mips.
* gnu/packages/image.scm (libjpeg-turbo)[arguments]: Add substitution to
set variable type before use.
2016-12-13 11:15:32 +02:00
Marius Bakke 61dd253f8e
gnu: lftp: Update to 4.7.4.
* gnu/packages/ftp.scm (lftp): Update to 4.7.4.
[home-page]: Change to new domain.
[source]: Adjust to new domain. Add mirror.
2016-12-13 09:38:01 +01:00
Marius Bakke d660f7be6d
gnu: python-setuptools: Update to 31.0.0.
* gnu/packages/python.scm (python-setuptools, python2-setuptools): Update to
31.0.0.
[source]: Use 'pypi-uri'.
[license]: Update for bundled libraries.
2016-12-13 09:37:49 +01:00
Marius Bakke ad04bd6b2a
gnu: duplicity: Use 'modify-phases' syntax.
* gnu/packages/backup.scm (duplicity)[arguments]: Use 'modify-phases'.
2016-12-13 09:37:43 +01:00
Tobias Geerinckx-Rice 7843f276d1
gnu: xf86-video-nouveau: Update to 1.0.13.
* gnu/packages/xorg.scm (xf86-video-nouveau): Update to 1.0.13.
2016-12-13 04:59:22 +01:00
Tobias Geerinckx-Rice 80a612dccf
gnu: xf86-input-synaptics: Update to 1.9.0.
* gnu/packages/xorg.scm (xf86-input-synaptics): Update to 1.9.0.
2016-12-13 04:50:28 +01:00
Tobias Geerinckx-Rice f63491a385
gnu: xf86-input-mouse: Update to 1.9.2.
* gnu/packages/xorg.scm (xf86-input-mouse): Update to 1.9.2.
2016-12-13 04:50:28 +01:00
Tobias Geerinckx-Rice 5de2ec6deb
gnu: xf86-input-joystick: Update to 1.6.3.
* gnu/packages/xorg.scm (xf86-input-joystick): Update to 1.6.3.
2016-12-13 04:50:28 +01:00
Tobias Geerinckx-Rice 08cf3e4ce5
gnu: xf86-input-evdev: Update to 2.10.4.
* gnu/packages/xorg.scm (xf86-input-evdev): Update to 2.10.4.
2016-12-13 04:50:27 +01:00
Tobias Geerinckx-Rice 2f79bbfc01
gnu: nano: Update to 2.7.2.
* gnu/packages/nano.scm (nano): Update to 2.7.2.
2016-12-13 04:30:04 +01:00
Tobias Geerinckx-Rice 68a9d6df5e
gnu: perl-dbix-class-introspectablem2m: Update source tarball URL.
* gnu/packages/perl.scm (perl-dbix-class-introspectablem2m)[source]: Update
tarball URL.
2016-12-12 22:08:45 +01:00
Tobias Geerinckx-Rice 32fd260076
gnu: cssc: Update to 1.4.0.
* gnu/packages/version-control.scm (cssc): Update to 1.4.0.
[source]: Remove unneeded patches (i.e. all of them).
* gnu/packages/patches/cssc-gets-undeclared.patch: Delete file.
* gnu/packages/patches/cssc-missing-include.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Remove deleted patches.
2016-12-12 22:08:45 +01:00
Tobias Geerinckx-Rice bea3cf4b90
gnu: gsl: Update to 2.3.
* gnu/packages/maths.scm (gsl): Update to 2.3.
2016-12-12 22:08:45 +01:00
Tobias Geerinckx-Rice 469846a7ba
gnu: vim: Update to 8.0.0133.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0133.
2016-12-12 22:08:44 +01:00
Kei Kebreau b43ec33b6d
gnu: denemo: Change default preferences to use the already-present lilypond.
* gnu/packages/music.scm (denemo)[progpagated-inputs]: Move lilypond to ...
[inputs]: ... here.
[phases]: New phase set-lilypond.
2016-12-12 12:16:17 -05:00
Efraim Flashner 987ad88fb6
gnu: calibre: Update to 2.74.0.
* gnu/packages/ebook.scm (calibre): Update to 2.74.0.
2016-12-12 16:14:30 +02:00
Efraim Flashner 0468eddafb
gnu: python-sip: Update to 4.18.1.
* gnu/packages/qt.scm (python-sip): Update to 4.18.1.
2016-12-12 16:14:30 +02:00
Efraim Flashner f9513086c4
gnu: python-pyqt-4: Use 'modify-phases' syntax.
* gnu/packages/qt.scm (python-pyqt-4)[arguments]: Use 'modify-phases'
syntax.
2016-12-12 16:14:30 +02:00
Efraim Flashner a0bc2d45eb
gnu: python-pyqt@5.5: Remove variable.
* gnu/packages/qt.scm (python-pyqt@5.5, python2-pyqt@5.5): Remove them.
2016-12-12 16:14:29 +02:00
Efraim Flashner c5ea912016
gnu: calibre: Update qt dependancies.
* gnu/packages/ebook.scm (calibre)[native-inputs]: Remove qt, add
qtbase.
[inputs]: Remove qt, replace python2-pyqt@5.5 with python2-pyqt.
2016-12-12 16:14:29 +02:00
Efraim Flashner e9adcd81b1
gnu: python-pyqt: Build with more qt modules.
* gnu/packages/qt.scm (python-pyqt)[inputs]: Add qtbase, qtconnectivity,
qtdeclarative, qtlocation, qtmultimedia, qtsensors, qtserialport, qtsvg,
qttools, qtwebchannel, qtwebkit, qtwebsockets, qtx11extras,
qtxmlpatterns.
(python2-pyqt)[inputs]: Same.
(python-pyqt@4)[inputs]: Only use python.
2016-12-12 16:14:24 +02:00
Ben Woodcroft 2df3d147ef
gnu: orfm: Update to 0.6.0.
* gnu/packages/bioinformatics.scm (orfm): Update to 0.6.0.
2016-12-12 20:49:31 +10:00
Christopher Baines 23b40c6625
gnu: direnv: Update to 2.10.0.
* gnu/packages/shellutils.scm (direnv): Update to 2.10.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-11 17:58:55 -05:00
Leo Famulari 4a990395d7
Merge branch 'staging' 2016-12-11 15:03:52 -05:00
Danny Milosavljevic 0c6fc4b7e5
gnu: sunxi-tools: Update to 1.4.2.
* gnu/packages/admin.scm (sunxi-tools): Update to 1.4.2.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-11 14:14:31 -05:00
Marius Bakke 4eb6ed28a3
gnu: python-html5lib: Add dependency on python-webencodings.
* gnu/packages/python.scm (python-html5lib,
python2-html5lib)[propagated-inputs]: Add python-webencodings.
2016-12-11 20:09:26 +01:00
Marius Bakke adbca19e83
gnu: Add python-webencodings.
* gnu/packages/python.scm (python-webencodings, python2-webencodings): New
variables.
2016-12-11 20:09:23 +01:00
Mark H Weaver 81d6fd2457
gnu: linux-libre: Update to 4.8.14.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.14.  Remove patches.
(linux-libre-arm-generic): Remove patches.
2016-12-11 09:51:10 -05:00
Mark H Weaver 762bc71e21
gnu: linux-libre@4.4: Update to 4.4.38.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.38.
Remove patches.
2016-12-11 09:51:08 -05:00
Ricardo Wurmus 0ff55f9d77
gnu: fcgi: Disable parallel building.
* gnu/packages/web.scm (fcgi)[arguments]: Disable parallel building.
2016-12-11 15:18:36 +01:00
Tobias Geerinckx-Rice 1ce6f33b0c
gnu: Add sshoot.
* gnu/packages/vpn.scm (sshoot): New variable.
2016-12-11 11:58:41 +01:00
Tobias Geerinckx-Rice 6c2e82bcb7
gnu: Add python-argcomplete.
* gnu/packages/python.scm (python-argcomplete): New variable.
2016-12-11 11:58:40 +01:00
Tobias Geerinckx-Rice 5c863d57ff
gnu: Add sshuttle.
* gnu/packages/vpn.scm (sshuttle): New variable.
2016-12-11 11:58:40 +01:00
Christopher Baines 97bb1ab665
services: Activate system prior to services.
* gnu/services.scm (activation-script): Move 'activation-current-system'
call before (for-each primitive-load …).

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-11 09:31:34 +01:00
Leo Famulari 5ce09ef18f
gnu: openjpeg-2.1.2: Use a meaningful file-name for the source code.
This is a followup to commit 0e8b7b1c35.

* gnu/packages/image.scm (openjpeg-2.1.2)[source]: Give a meaningful
file-name.
2016-12-11 02:25:16 -05:00
Leo Famulari b245f7589e
gnu: diffoscope: Update to 63.
* gnu/packages/package-management.scm (diffoscope): Update to 63.
[arguments]: Remove obsolete 'disable-failing-test' and 'disable-egg-zipping'
phases. The former was fixed upstream, and the latter is fixed by the new Python
build system.
2016-12-11 02:04:38 -05:00
Leo Famulari 0e8b7b1c35
gnu: openjpeg: Update replacement to 2.1.2 [fixes CVE-2016-{7445,8332}].
* gnu/packages/image.scm (openjpeg/fixed): Replace variable with ...
(openjpeg-2.1.2): ... this.
[patches]: Remove patches inherited from openjpeg.
(openjpeg)[replacement]: Replace with openjpeg-2.1.2.
2016-12-11 02:04:31 -05:00
Mark H Weaver d94691e0c2
Merge branch 'master' into staging 2016-12-10 23:03:57 -05:00
Kei Kebreau edd1652e0a
gnu: Add denemo.
* gnu/packages/music.scm (denemo): New variable.
2016-12-10 19:40:01 -05:00
Tobias Geerinckx-Rice 14f4a46c98
gnu: libpsl: Update to 0.16.0.
* gnu/packages/web.scm (libpsl): Update to 0.16.0.
2016-12-11 00:50:13 +01:00
David Craven e31b75f22f
gnu: Add ocaml-menhir.
* gnu/packages/ocaml.scm (ocaml-menhir): New variable.
2016-12-10 21:47:08 +01:00
David Craven 2694d1dc80
gnu: coq: Update to 8.5pl2.
* gnu/packages/ocaml.scm (coq): Update to 8.5pl2.
  [arguments]: Configure script takes single hyphen arguments.
2016-12-10 21:47:08 +01:00
David Craven 60bc622b1d
gnu: idris: Update to 0.12.3.
* gnu/packages/haskell.scm (idris): Update to 0.12.3.
  [origin]: Remove snippet.
  [inputs]: Add ghc-aeson, ghc-async, ghc-fsnotify, ghc-regex-tdfa,
  ghc-tasty-golden, ghc-tasty-rerun and ghc-terminal-size.
  [arguments]: Disable tests.
2016-12-10 21:47:08 +01:00
David Craven 3ea25176f0
gnu: ghc-trifecta: Update to 1.6.
* gnu/packages/haskell.scm (ghc-trifecta): Update to 1.6.
  [inputs]: Add ghc-doctest and ghc-quickcheck.
  [arguments]: Enable tests.
2016-12-10 21:47:08 +01:00
David Craven 4e05c326ef
gnu: Add ghc-terminal-size.
* gnu/packages/haskell.scm (ghc-terminal-size): New variable.
2016-12-10 21:47:08 +01:00
David Craven 5e6cafe157
gnu: Add ghc-ieee754.
* gnu/packages/haskell.scm (ghc-ieee754): New variable.
2016-12-10 21:47:07 +01:00
David Craven f7e624b639
gnu: Add ghc-tasty-rerun.
* gnu/packages/haskell.scm (ghc-tasty-rerun): New variable.
2016-12-10 21:47:07 +01:00
David Craven b7f96285a5
gnu: Add ghc-fsnotify.
* gnu/packages/haskell.scm (ghc-fsnotify): New variable.
2016-12-10 21:47:07 +01:00
David Craven f63981de14
gnu: Add ghc-hinotify.
* gnu/packages/haskell.scm (ghc-hinotify): New variable.
2016-12-10 21:47:07 +01:00
Mark H Weaver 56c394ee43
gnu: icecat: Add more fixes from upstream mozilla-esr45.
* gnu/packages/gnuzilla.scm (icecat)[sources]: Add more fixes from the
upstream mozilla-esr45 repository.
2016-12-10 15:22:38 -05:00
Efraim Flashner 67c539e21f
gnu: Remove unused patch.
* gnu/packages/patches/openjpeg-CVE-2015-6581.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-12-10 21:59:56 +02:00
Efraim Flashner a304b6c362
gnu: openjpeg: Add fixes for CVE-2016-{9850,9851}.
* gnu/packages/image.scm (openjpeg)[replacement]: New field.
(openjpeg/fixed): New variable, patch against CVE-2016-9850,
CVE-2016-9851.
* gnu/packages/patches/openjpeg-CVE-2016-9850-CVE-2016-9851.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2016-12-10 21:46:45 +02:00
Efraim Flashner 70c1d5ed05
gnu: ffmpeg@2.8: Update to 2.8.9.
* gnu/packages/video.scm (ffmpeg@2.8): Update to 2.8.9.
2016-12-10 21:00:23 +02:00
Efraim Flashner a6cd85742d
gnu: jasper: Update to 2.0.6.
* gnu/packages/image.scm (jasper): Update to 2.0.6.
2016-12-10 20:59:19 +02:00
Christopher Baines a77f036084
gnu: password-store: Don't run tests in parallel.
* gnu/packages/password-utils.scm (password-store): Don't run tests in
  parallel, as it causes them to hang and the build to timeout.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-10 14:07:32 +01:00
Christopher Baines 619f98fa8f
gnu: password-store: Delete build phase
* gnu/packages/password-utils.scm (password-store): Remove the build
  phase, as it is unused.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-10 14:04:18 +01:00
Marius Bakke fc184fe2de
gnu: openssl-next: Update to 1.1.0c [fixes CVE-{7053,7054,7055}].
* gnu/packages/tls.scm (openssl-next): Update to 1.1.0c.
[arguments]: Duplicate 'configure' to add rpath flag previously handled by
now-defunct 'patch-runpath' phase. Duplicate 'remove-miscellany' phase.
2016-12-10 14:00:05 +01:00
Kei Kebreau fdb552bbd4
gnu: windowmaker: Fix invocation of 'wmsetbg'.
* gnu/packages/gnustep.scm (windowmaker)[arguments]: Add substitution of
40-character limit with a 107-character limit.
2016-12-09 22:10:06 -05:00
Ben Woodcroft a225db5293
gnu: vsearch: Update to 2.3.4.
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.3.4.
2016-12-10 10:45:13 +10:00
Ben Woodcroft 7922ab8fe8
gnu: pardre: Update to 1.1.5-1.
* gnu/packages/bioinformatics.scm (pardre): update to 1.1.5-1.
[source]: Update source hash.
2016-12-10 10:45:12 +10:00
Mark H Weaver 6b2921c3ac
gnu: linux-libre: Add fixes for CVE-2016-8655 et al.
* gnu/packages/linux.scm (linux-libre, linux-libre-arm-generic):
Add patches for CVE-2016-8655 and the vulnerability described in
<http://seclists.org/oss-sec/2016/q4/644>.
2016-12-09 18:36:21 -05:00
Mark H Weaver 1134e99d86
gnu: linux-libre@4.4: Add fixes for CVE-2016-8655 et al.
* gnu/packages/linux.scm (linux-libre-4.4): Add patches for CVE-2016-8655 and
the vulnerability described in <http://seclists.org/oss-sec/2016/q4/644>.
2016-12-09 18:36:03 -05:00
Ludovic Courtès 72c0b68780
gnu: libsoup: Update to 2.56.0.
* gnu/packages/gnome.scm (libsoup): Update to 2.56.0.
2016-12-10 00:10:30 +01:00
Ben Woodcroft fdf3a68d9e
gnu: ruby-sdoc: Update to 0.4.2.
* gnu/packages/ruby.scm (ruby-sdoc): Update to 0.4.2.
[arguments]: Remove 'relax-minitest-requirement' phase, Add 'set-rubylib'
phase.
[native-inputs]: Add ruby-hoe.
2016-12-10 07:51:47 +10:00
Ben Woodcroft 71596c3ce6
gnu: Adjust gemspec modifications for ruby-2.3.2.
* gnu/packages/ruby.scm (ruby-mocha)[arguments]: Adjust 'substitute*' of
gemspec.
(ruby-domain-name)[arguments]: Likewise.
2016-12-10 07:50:16 +10:00
Mark H Weaver 750778abd4
gnu: linux-libre: Update to 4.8.13.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.13.
2016-12-09 15:13:22 -05:00
Mark H Weaver 33d6a2ff9f
gnu: linux-libre@4.4: Update to 4.4.37.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.37.
2016-12-09 15:10:17 -05:00
Paul Garlick f81c6a4932
gnu: gmsh: Update to 2.15.0.
* gnu/packages/maths.scm (gmsh): Update to 2.15.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-09 19:14:21 +01:00
Marius Bakke dfdc92259b
gnu: libev: Update to 4.23.
* gnu/packages/libevent.scm (libev): Update to 4.23.
2016-12-09 18:23:05 +01:00
Ludovic Courtès f80b4d2ce0
Merge remote-tracking branch 'origin/master' into staging 2016-12-09 18:11:14 +01:00
Ludovic Courtès 13b5f44b47
gnu: libepoxy: Add patch to avoid segfault when GL support is missing.
* gnu/packages/patches/libepoxy-gl-null-checks.patch: New file.
* gnu/packages/gl.scm (libepoxy)[source]: Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-12-09 18:09:43 +01:00
Ludovic Courtès d99ee3d923
gnu: ruby-sdoc: Really relax minitest version requirement.
* gnu/packages/ruby.scm (ruby-sdoc)[arguments]: Adjust pattern in
'relax-minitest-requirement'.
2016-12-09 15:39:13 +01:00
Hartmut Goebel 43e8824d3c
gnu: python-pyqt: Fix build by explicitly setting the stubsdir.
* gnu/packages.qt.scm (python-pyqt, python2-pyqt)[arguments]: In phase
'configure' pass option --stubsdir.
2016-12-09 13:04:17 +01:00
Hartmut Goebel 931eaeaad9
gnu: python-pyqt-5.5: Use non-inherited "configure" phase.
This allows passing different options for 5.5 than for the main version
(which is currently 5.6).

* gnu/packages.qt.scm (python-pyqt-5.5, python2-pyqt-5.5)[arguments]: Copy
from (python-pyqt)[arguments].
2016-12-09 13:04:17 +01:00
Hartmut Goebel 9fde877856
gnu: python2-pyqt-4: Change package name to python2-pyqt.
* gnu/packages/qt.scm (python2-pyqt-4)[package]: Change "name"
python2-pyqt.
2016-12-09 13:04:17 +01:00
Danny Milosavljevic 444a79b6fe
gnu: Add python-flask-restful-swagger.
* gnu/packages/python.scm (python-flask-restful-swagger,
  python2-flask-restful-swagger): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-09 11:57:10 +01:00
Marius Bakke fe3b8862cf
gnu: alot: Update to 0.4.
* gnu/packages/mail.scm (alot): Update to 0.4.
[arguments]: Update python3 comment.
2016-12-09 11:47:39 +01:00
Julien Lepiller b1a3c533f3
gnu: php: Update to 7.0.14.
* gnu/packages/php.scm (php): Update to 7.0.14.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-09 09:58:36 +01:00
Leo Famulari e11fb2b862
gnu: parallel: Update 20161122.
* gnu/packages/parallel.scm (parallel): Update to 20161122.
2016-12-08 23:12:51 -05:00
rennes 1f6a73ee6b
gnu: Add gnome-system-monitor.
* gnu/packages/gnome.scm (gnome-system-monitor): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-08 23:42:12 +01:00
ng0 0c69a17efd
gnu: Add epic5.
* gnu/packages/irc.scm (epic5): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-12-08 22:36:15 +02:00
Efraim Flashner c32f0e3059
gnu: enlightenment: Update to 0.21.4.
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.21.4.
2016-12-08 21:45:37 +02:00
Efraim Flashner 80a92a0fb5
gnu: efl: Update to 1.18.4.
* gnu/packages/enlightenment.scm (efl): Update to 1.18.4.
2016-12-08 21:45:37 +02:00
Efraim Flashner 256470325b
gnu: tor: Update to 0.2.8.11.
* gnu/packages/tor.scm (tor): Update to 0.2.8.11.
2016-12-08 21:45:33 +02:00
Leo Famulari cb5a32c022
gnu: imagemagick: Update to 6.9.6-7.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.6-7.
2016-12-08 14:32:02 -05:00
Leo Famulari 57513498de
gnu: tcsh: Fix out of bounds read.
* gnu/packages/patches/tcsh-fix-out-of-bounds-read.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/shells.scm (tcsh)[replacement]: New field.
(tcsh/fixed): New variable.
2016-12-08 13:53:36 -05:00
José Miguel Sánchez García a2c1dceadd
gnu: Add vis.
* gnu/packages/text-editors.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2016-12-08 15:07:34 +01:00
Marius Bakke a14061aae6
gnu: python-html5lib: Update to 1.0b10 [fixes CVE-2016-{9909,9910}].
* gnu/packages/python.scm (python-html5lib, python2-html5lib): Update to 1.0b10.
2016-12-08 13:55:46 +01:00
Ben Woodcroft 1b7f17ef90
gnu: vsearch: Update to 2.3.3.
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.3.3.
2016-12-08 22:39:10 +10:00
Alex Kost cb72d34348
gnu: libreoffice: Add 'libreoffice' symlink.
* gnu/packages/libreoffice.scm (libreoffice)[arguments]: Adjust
'bin-install' phase to make 'libreoffice' symlink along with 'soffice'.

Co-authored-by: ng0 <ng0@libertad.pw>
2016-12-08 12:32:52 +03:00
Alex Kost a9c61335c9
gnu: Update 'geiser' hash and deprecate 'geiser-next'.
* gnu/packages/emacs.scm (geiser)[source]: Update the hash (the release
tarball was updated in place).
(geiser-next): Deprecate.
2016-12-08 12:32:52 +03:00
John Darrington 7b706a4930
gnu: Fix path to /etc/netconfig in libtirpc.
* gnu/packages/onc-rpc.scm (libtirpc) [arguments]: Replace "/etc/netconfig"
with (string-append %output "/etc/netconfig")
2016-12-08 08:30:57 +01:00
Adonay Felipe Nogueira c451474488
gnu: samba: Don't expect configuration files inside the store.
Fixes <http://bugs.gnu.org/24834>.

* gnu/packages/samba.scm (samba)[arguments]: Add --sysconfdir configure flag.
Add 'disable-etc-samba-directory-creation' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-08 00:28:47 +01:00
José Miguel Sánchez García 35cdc267ae
gnu: Add lua-lpeg.
* gnu/packages/lua.scm (lua-lpeg): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-07 23:20:24 +01:00
José Miguel Sánchez García db913ac431
gnu: Add libtermkey.
* gnu/packages/terminals.scm (libtermkey): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-07 23:09:49 +01:00
Ludovic Courtès 3593e5d5c5
gnu: cross-base: Move phases to (gnu build cross-toolchain).
* gnu/packages/cross-base.scm (cross-gcc-arguments) <#:phases>: Use
'cross-gcc-build-phases', and move body cross-toolchain.scm.
(cross-gcc): Add #:imported-modules.  Add (gnu build cross-toolchain) to
 #:modules.
* gnu/build/cross-toolchain.scm: New file, with code from
'cross-gcc-arguments'.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-12-07 21:52:26 +01:00
Ludovic Courtès 3009a9e451
gnu: cross-base: Factorize list of cross environment variables.
* gnu/packages/cross-base.scm (cross-libc): Replace literal list of
environment variable names with %GCC-CROSS-INCLUDE-PATHS.
(cross-kernel-headers): Likewise.
2016-12-07 21:52:26 +01:00
Efraim Flashner 8a3ce2c7b0
gnu: ams-lv2: Remove CPU optimization flags on non-Intel hardware.
* gnu/packages/music.scm (ams-lv2)[arguments]: Add phase to remove
Intel specific CPU optimization flags when compiling on non-Intel
hardware.
2016-12-07 21:38:43 +02:00
Danny Milosavljevic bb4b17064d
gnu: python-sqlalchemy-utils: Update to 0.32.11.
* gnu/packages/python.scm (python-sqlalchemy-utils): Update to 0.32.11.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-07 18:51:46 +01:00
Danny Milosavljevic 1ed21519f7
gnu: Add python-sadisplay.
* gnu/packages/python.scm (python-sadisplay, python2-sadisplay): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-07 14:20:46 +01:00
Efraim Flashner 491f291892
gnu: subversion: Update to 1.8.17.
* gnu/packages/version-control.scm (subversion): Update to 1.8.17.
2016-12-07 13:15:06 +02:00
Manolis Ragkousis f13f60cb26
gnu: make-bootstrap: Produce the correct %glibc-bootstrap-tarball for Hurd systems.
* gnu/packages/make-bootstrap.scm (%glibc-bootstrap-tarball): Make it a procedure.
  (%glibc-stripped): Make it a procedure and move the kernel specific part from
  here to ...
* guix/build/make-bootstrap.scm (make-stripped-libc): ... here. New file.
* Makefile.am (MODULES): Add it.
2016-12-07 12:59:02 +02:00
Manolis Ragkousis 1ecb7be8b7
gnu: cross-kernel-headers: Remove propagated-inputs from xhurd-headers.
* gnu/packages/cross-base.scm (xhurd-headers)[propagated-inputs]: Remove them.
2016-12-07 12:56:02 +02:00
Jan Nieuwenhuizen 88da729ff7
gnu: guile-2.0: support mingw.
* gnu/packages/guile.scm (guile-2.0): Support MinGW.
2016-12-07 10:23:17 +01:00
Jan Nieuwenhuizen ae12d58627
gnu: readline: support mingw.
* gnu/packages/patches/readline-7.0-mingw.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/readline.scm (readline): Support MinGW.
2016-12-07 10:23:17 +01:00
Mark H Weaver d230cf61f6
gnu: ncurses: support mingw.
* gnu/packages/ncurses.scm (ncurses): Support MinGW.

Co-Authored-By: Jan Nieuwenhuizen <janneke@gnu.org>
2016-12-07 10:23:17 +01:00
Jan Nieuwenhuizen 7f1c32f0e6
gnu: gmp: build shared library for mingw.
* gnu/packages/multiprecision.scm (gmp)[MINGW]: Use --enable-shared.
2016-12-07 10:23:17 +01:00
Jan Nieuwenhuizen d788fcd3ba
gnu: libunistring: support mingw: propagate libiconv if needed.
* gnu/packages/libunistring (libunistring): propagated-inputs: add
libiconv-if-needed.  Fixes unicode translation in MinGW.
2016-12-07 10:23:17 +01:00
Jan Nieuwenhuizen 4dab8c5906
gnu: Add function libiconv-if-needed.
* gnu/packages/base.scm (libiconv-if-needed): New function.
2016-12-07 10:23:16 +01:00
Jan Nieuwenhuizen cba36e6482
gnu: cross-base: Add i686-w64-mingw32 target.
* guix/utils.scm (mingw-target?): New function.
* gnu/packages/cross-base.scm (cross-gcc-snippet): New procedure
(cross-gcc): Use it.
(cross-gcc-arguments, cross-gcc-patches, cross-gcc): Support MinGW.
(native-libc, cross-newlib?): New functions.
(cross-libc): Use cross-newlib? to support MinGW.
(%gcc-include-paths, %gcc-cross-include-paths): New variables.
2016-12-07 10:23:16 +01:00
Jan Nieuwenhuizen cf0ef075c4
gnu: Add mingw-w64.
* gnu/packages/patches/gcc-4.9.3-mingw-gthr-default.patch,
gnu/packages/patches/mingw-w64-5.0rc2-gcc-4.9.3.patch,
gnu/packages/mingw.scm: New files.
* gnu/local.mk (dist_patch_DATA): Add the patches.
(GNU_SYSTEM_MODULES): Add mingw.scm.
2016-12-07 10:23:16 +01:00
Ricardo Wurmus 4908ae4847
gnu: zynaddsubfx: Update to 3.0.1.
* gnu/packages/music.scm (zynaddsubfx): Update to 3.0.1.
2016-12-07 10:13:04 +01:00
Efraim Flashner 4ff71cac67
gnu: libx264: Update to 20161205-2245.
* gnu/packages/video.scm (libx264): Update to 20161205-2245.
[source]: Use https.
[home-page]: Same.
2016-12-07 07:33:23 +02:00
Leo Famulari 425fabfc9a
gnu: radicale: Skip the test suite.
* gnu/packages/dav.scm (radicale)[arguments]: Skip the tests.
2016-12-06 20:46:18 -05:00
Efraim Flashner 37479058a1
gnu: ffmpeg: Update to 3.2.2.
* gnu/packages/video.scm (ffmpeg): Update to 3.2.2.
2016-12-06 20:48:56 +02:00
Ricardo Wurmus 61c71171a2
gnu: emacs-expand-region: Update to 0.11.0.
* gnu/packages/emacs.scm (emacs-expand-region): Update to 0.11.0.
2016-12-06 16:14:53 +01:00
Efraim Flashner 1ebe49f192
gnu: httpd: Add fix for CVE-2016-8740.
* gnu/packages/web.scm (httpd)[source]: Add patch for CVE-2016-8740.
* gnu/packages/patches/httpd-CVE-2016-8740.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2016-12-06 15:39:25 +02:00
Hartmut Goebel 3a735ecf0e
gnu: python2-notebook: Fix build.
* gnu/packages/python.scm (python2-notebook)[properties]: Add
python2-variant.
(python2-notebook)[native-packages] add python2-mock. [arguments] Add
phase "disable-test-case" for disabling a failing test. immediately
2016-12-06 11:30:15 +01:00
Hartmut Goebel c4abbac349
gnu: python-ipython-genutils: Update description.
* gnu/packages/python.scm (python-ipython-genutils)[description]: Add
deprecation note and TODO comment.
2016-12-06 11:29:37 +01:00
Hartmut Goebel 4dbc8ec483
gnu: python-ipython: Update to 4.0.3
* gnu/packages/python.scm (python-ipython, python2-ipython): Update to
version 4.0.3.
2016-12-06 11:29:35 +01:00
Ricardo Wurmus 5a66e25ce6
gnu: Add seq24.
* gnu/packages/music.scm (seq24): New variable.
* gnu/packages/patches/seq24-rename-mutex.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patch.
2016-12-06 10:15:49 +01:00
Efraim Flashner 24420005ec
gnu: links: Update to 2.14.
* gnu/packages/links.scm (links): Update to 2.14.
2016-12-06 10:11:27 +02:00
Jan Nieuwenhuizen 590abe010b
gnu: Add openh264.
* gnu/packages/video.scm (openh264): New variable.
2016-12-06 10:11:18 +02:00
Ludovic Courtès 40f2d1bc3b
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 8d125c.
2016-12-06 01:24:06 +01:00
Ludovic Courtès 8243951ef1
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to e11c42f.
2016-12-06 00:24:24 +01:00
Leo Famulari 4bd391f557
gnu: i3-wm: Update to 4.13.
* gnu/packages/wm.scm (i3-wm): Update to 4.13.
[arguments]: Pass '-std=c11' to #:make-flags. Provide path to XML_CATALOG_FILES.
Pass '--disable-builddir' to #:configure-flags. Re-enable the 'configure' phase
to adjust to new Autotools build system.
[inputs]: Add xcb-util-xrm.
[native-inputs]: Add docbook-xsl.
2016-12-05 17:09:15 -05:00
Leo Famulari 81f4f1051f
gnu: xcb-util-cursor: Propagate dependencies from 'xcb-cursor.pc'.
* gnu/packages/xorg.scm (xcb-util-cursor)[inputs]: Move xcb-util-renderutil and
xcb-util-image to ...
[propagated-inputs]: ... here.
2016-12-05 17:09:15 -05:00
Leo Famulari 6e02766d43
gnu: ruby-2.2, ruby-2.1, ruby-1.8: Don't replace with ruby-2.3.3.
* gnu/packages/ruby.scm (ruby-2.2, ruby-2.1, ruby-1.8)[replacement]: New field.
2016-12-05 16:41:23 -05:00
Ludovic Courtès 3a6a563228
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 9328eaf.
2016-12-05 21:09:02 +01:00
Ludovic Courtès 9328eafbf5
services: file-system: Make sure fsck.* commands are in $PATH.
Fixes a regression introduced in
bf7ef1bb84, whereby the fsck.* commands
would not be found.

* gnu/services/base.scm (file-system-shepherd-service): Call calls to
'setenv'.
2016-12-05 20:54:59 +01:00
Tobias Geerinckx-Rice c0cc805e3f
gnu: fuse-exfat: Update to 1.2.5.
* gnu/packages/linux.scm (fuse-exfat): Update to 1.2.5.
[native-inputs]: Remove scons build system which is no longer used.
[arguments]: Remove.
[home-page]: Replace dead Google Code home page.
2016-12-05 20:33:31 +01:00
Tobias Geerinckx-Rice 694f485b47
gnu: exfat-utils: Update to 1.2.5.
* gnu/packages/mtools.scm (exfat-utils): Update to 1.2.5.
2016-12-05 20:33:31 +01:00
Tobias Geerinckx-Rice 8975d00cd6
gnu: Add mktorrent.
* gnu/packages/bittorrent.scm (mktorrent): New variable.
2016-12-05 20:33:30 +01:00
Leo Famulari 8f35c03061
gnu: python-flask: Propagate python-click.
* gnu/packages/python.scm (python-flask, python2-flask)[native-inputs]: Move
python-click to ...
[propagated-inputs]: ... here.
2016-12-04 19:27:47 -05:00
Ludovic Courtès 95088559a9
gnu: shepherd: Update to 0.3.2.
* gnu/packages/admin.scm (shepherd): Update to 0.3.2.
[properties]: New field.
2016-12-04 22:32:47 +01:00
Ludovic Courtès ba9f0db08c
services: tor: Make sure /var/lib is world-readable.
* gnu/services/networking.scm (tor-hidden-service-activation): Add
'chmod' call for /var/lib.
2016-12-04 22:32:25 +01:00
Marius Bakke 222222be63
gnu: vim: Update to 8.0.0124.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0124.
2016-12-04 22:25:30 +01:00
Tobias Geerinckx-Rice c8608faf14
gnu: dovecot: Update to 2.2.27.
* gnu/packages/mail.scm (dovecot): Update to 2.2.27.
[source, home-page]: Use HTTPS.
2016-12-04 22:15:02 +01:00
Tobias Geerinckx-Rice 9865a15057
gnu: vim: Update to 8.0.0118.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0118.
2016-12-04 22:15:02 +01:00
Ricardo Wurmus b3410b44b2
gnu: Add qmidiarp.
* gnu/packages/music.scm (qmidiarp): New variable.
2016-12-04 20:52:51 +01:00
Christopher Andersson 4cf9f57b0e
gnu: Add Swedish Aspell dictionary.
* gnu/packages/aspell.scm (aspell-dict-sv): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-04 19:05:06 +01:00
Marius Bakke 76bbce6af2
gnu: mupdf: Update to 1.10a.
* gnu/packages/patches/mupdf-CVE-2016-6265.patch: Delete file.
* gnu/packages/patches/mupdf-CVE-2016-6525.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7504.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7505.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7506.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7563.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7564.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-8674.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-9017.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-9136.patch: Likewise.
* gnu/packages/patches/mupdf-build-with-openjpeg-2.1.patch: Adjust to 1.10a.
* gnu/local.mk (dist_patch_DATA): Remove deleted patches.
* gnu/packages/pdf.scm (mupdf): Update to 1.10a.
[source]: Remove patches.
2016-12-04 17:41:54 +01:00
Marius Bakke a351fc8369
Merge branch 'master' into staging 2016-12-04 17:41:36 +01:00
Alex Kost d1a5b20081
gnu: Move image viewers to (gnu packages image-viewers).
* gnu/packages/feh.scm (feh): Remove file.  Move package to...
* gnu/packages/geeqie.scm (geeqie): Likewise...
* gnu/packages/sxiv.scm (sxiv): Likewise...
* gnu/packages/image-viewers.scm: ... here.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove files.
2016-12-04 17:42:05 +03:00
Alex Kost 023f0fb06e
gnu: exiv2: Move to (gnu packages image).
* gnu/packages/geeqie.scm (exiv2): Move to...
* gnu/packages/image.scm: ... here.
* gnu/packages/gnome.scm: Adjust the used modules.
* gnu/packages/gnunet.scm: Likewise.
* gnu/packages/gps.scm: Likewise.
2016-12-04 17:39:48 +03:00
Alex Kost c3a10d30d1
gnu: emms: Update to 4.2.
* gnu/packages/emacs.scm (emms): Update to 4.2.
[arguments]: EMMS installs "emms-print-metadata" now but assumes that
BINDIR exists, so do not install it manually in 'post-install' phase,
and make "/bin" directory in 'pre-install' phase.
2016-12-04 17:39:48 +03:00
Alex Kost c44ec4a8b4
gnu: emacs-with-editor: Update to 2.5.6.
* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.5.6.
2016-12-04 17:39:48 +03:00
Alex Kost 4e0d9fce5a
gnu: emacs-hl-todo: Update to 1.7.4.
* gnu/packages/emacs.scm (emacs-hl-todo): Update to 1.7.4.
2016-12-04 17:39:47 +03:00
Ricardo Wurmus 951581a2d6
gnu: Add ingen.
* gnu/packages/music.scm (ingen): New variable.
2016-12-04 11:24:24 +01:00
Ricardo Wurmus f91d0d08dd
gnu: Add raul-devel.
* gnu/packages/audio.scm (raul-devel): New variable.
2016-12-04 11:17:46 +01:00
Ricardo Wurmus a9276c12ba
gnu: Add ganv-devel.
* gnu/packages/gtk.scm (ganv-devel): New variable.
2016-12-04 11:17:45 +01:00
Ricardo Wurmus 849c3d03f0
gnu: Add ams-lv2.
* gnu/packages/music.scm (ams-lv2): New variable.
2016-12-04 10:16:37 +01:00
Ricardo Wurmus 85f4863f3b
gnu: lvtk: Build UI library.
* gnu/packages/audio.scm (lvtk)[inputs]: Add gtkmm-2.
[arguments]: Pass "-std=c++11" flag.
2016-12-04 10:16:37 +01:00
Efraim Flashner 8a610eb605
gnu: Fix header in (gnu packages golang).
* gnu/packages/golang.scm: Replace header line declaring this file as
part of GNU Guix.
2016-12-04 08:50:30 +02:00
Efraim Flashner 8c15851717
gnu: Add econnman.
* gnu/packages/connman.scm (econnman): New variable.
2016-12-04 08:39:49 +02:00
Efraim Flashner 22fda787f6
gnu: Add lekha.
* gnu/packages/enlightenment.scm (lekha): New variable.
2016-12-04 08:39:49 +02:00
Efraim Flashner cf3504c69c
gnu: Add qsyncthingtray.
* gnu/packages/sync.scm (qsyncthingtray): New variable.
2016-12-04 08:39:48 +02:00
Efraim Flashner 760d6066f7
gnu: Rename owncloud.scm to sync.scm.
* gnu/packages/owncloud.scm: Rename to ...
* gnu/packages/sync.scm: ... this.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register it.
2016-12-04 08:39:48 +02:00
Efraim Flashner 7526edb9d5
gnu: Add rkflashtool.
* gnu/packages/flashing-tools.scm (rkflashtool): New variable.
2016-12-04 08:39:48 +02:00
Efraim Flashner c7ad32d94a
gnu: uget: Add missing input.
* gnu/packages/bittorrent.scm (uget)[native-inputs]: Add intltool.
2016-12-04 08:39:48 +02:00
Efraim Flashner 12ed023fb7
gnu: tor: Update to 0.2.8.10.
* gnu/packages/tor.scm (tor): Update to 0.2.8.10.
2016-12-04 08:39:48 +02:00
Leo Famulari 4b569a4ff5
gnu: acme-client: Update to 0.1.15.
* gnu/packages/tls.scm (acme-client): Update to 0.1.15.
[native-inputs]: Add pkg-config.
2016-12-03 23:28:22 -05:00
Leo Famulari b172196976
gnu: taglib: Update to 1.10.
* gnu/packages/mp3.scm (taglib): Update to 1.10.
2016-12-03 20:52:00 -05:00
Ben Woodcroft e990c81d38
gnu: aragorn: Update to 1.2.38.
* gnu/packages/bioinformatics.scm (aragorn): Update to 1.2.38.
2016-12-04 10:51:54 +10:00
Ricardo Wurmus 57b94e9d8d
gnu: Add highlight.
* gnu/packages/pretty-print.scm (highlight): New variable.
2016-12-03 23:26:16 +01:00
Ricardo Wurmus 3bec8a016f
gnu: git: Fix gitweb.
* gnu/packages/version-control.scm (git)[inputs]: Add perl-cgi.
[arguments]: Wrap "gitweb.cgi" with PERL5LIB.
2016-12-03 20:11:37 +01:00
Thomas Danckaert aa8c0ada2e
gnu: Add grantlee.
* gnu/packages/qt.scm (grantlee): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-03 18:55:01 +01:00
Thomas Danckaert f447dbc796
gnu: Add libksysguard.
* gnu/packages/kde.scm (libksysguard): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-03 18:55:01 +01:00
Mark H Weaver 5bdec7d634
gnu: icecat: Update to 45.5.1-gnu1.
* gnu/packages/gnuzilla.scm (icecat): Update to 45.5.1-gnu1.
[source]: Remove temporary URI for 45.3 beta.  Fix URI computation.  Remove
outdated patches.  Add more cherry-picked bug fixes from upstream
mozilla-esr45.  Use 'list' instead of quasiquote in 'patches' field.
2016-12-03 12:29:53 -05:00
John Darrington 8e3f813f22
gnu: Add Kerberos client service.
* doc/guix.texi (Kerberos Services)[Krb5 Service]: New subsubheading.
* gnu/services/kerberos.scm (krb5-service-type): New variable.
* gnu/services/configuration.scm (configuration-field-serializer,
  configuration-field-getter): Export variables.
2016-12-03 18:00:32 +01:00
Ricardo Wurmus 9bad404355
gnu: Add fcgiwrap.
* gnu/packages/web.scm (fcgiwrap): New variable.
2016-12-03 17:06:51 +01:00
Ricardo Wurmus ab519cfa3d
gnu: Add fcgi.
* gnu/packages/patches/fcgi-2.4.0-gcc44-fixes.patch: New file.
* gnu/packages/patches/fcgi-2.4.0-poll.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patches.
* gnu/packages/web.scm (fcgi): New variable.
2016-12-03 17:06:47 +01:00
Mark H Weaver e9913f8271
gnu: linux-libre: Update to 4.8.12.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.12.
2016-12-03 10:20:59 -05:00
Mark H Weaver bc6d461249
gnu: linux-libre@4.4: Update to 4.4.36.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.36.
2016-12-03 10:20:00 -05:00
Mark H Weaver 80a359f293
gnu: linux-libre@4.1: Update to 4.1.36.
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.36.
2016-12-03 10:19:08 -05:00
Ludovic Courtès 020434d497
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 463fb7d.
2016-12-03 12:05:32 +01:00
Leo Famulari a6c4790567
gnu: python-cryptography: Update to 1.6.
* gnu/packages/python.scm (python-cryptography, python2-cryptography): Update
to 1.6.
(python-cryptography-vectors, python2-cryptography-vectors): Update to 1.6.
2016-12-03 02:39:09 -05:00
Leo Famulari 80b63e670e
gnu: tzdata: Update to 2016j.
* gnu/packages/base.scm (tzdata): Update to 2016j.
[source]: Use HTTPS URL.
[home-page]: Use HTTPS URL.
2016-12-02 13:16:35 -05:00
Hartmut Goebel 447b9473cb
gnu: dblatex: Update comment.
* gnu/packages/docbook.scm (dblatex)[arguments]: Detail comment about why
the use of setuptools needs to be disabled.
2016-12-02 18:07:36 +01:00
Hartmut Goebel b0aa6ede25
gnu: python-numpy: Fix inputs.
This fixes 2efabc5589, where some inputs
have been changed to propagated-inputs, but the propagated-inputs are
still extended from inputs and the inputs are not extended at all.

* gnu/packages/python.scm (python-numpy, python2-numpy)[inputs]:
Extend from python-numpy-bootstrap's package-inputs. [propagated-inputs]:
Extend from python-numpy-bootstrap's package-propagated-inputs.
2016-12-02 18:07:36 +01:00
Hartmut Goebel 77a6932adf
gnu: python2-ipython: Fix inputs.
This fixes e62600feb6, where the inputs
have been changed to native-inputs, but still extended from inputs.

* gnu/packages/python.scm (python2-ipython)[native-inputs]: Extend
from python-ipython's package-native-inputs.
2016-12-02 18:07:36 +01:00
Hartmut Goebel fe4a8da445
gnu: python-numpydoc: Correct inputs.
This does what 213d1745c6 was
supposed to do.

* gnu/packages/python.scm (python-numpydoc, python-numpydoc)
Change first of the duplicate [native-inputs] definitions to
[propagated-inputs].
2016-12-02 18:07:36 +01:00
Hartmut Goebel e89aceab63
gnu: calibre: Do not use python setuptools for building.
* gnu/packages/ebook.scm (calibre)[arguments]: Set #:use-setuptools?
to false.
2016-12-02 18:07:36 +01:00
John Darrington bf7ef1bb84
gnu: file-system-shepherd-service: Use mount-file-system.
* gnu/services/base.scm (file-system-shepherd-service): Use
  mount-file-system instead of manually mounting the file system.
2016-12-02 17:43:30 +01:00
Marius Bakke d24727c019
gnu: Add dnscrypt-proxy.
* gnu/packages/dns.scm (dnscrypt-proxy): New variable.
2016-12-02 16:58:58 +01:00
Marius Bakke afe62a8bfb
gnu: Add dnscrypt-wrapper.
* gnu/packages/dns.scm (dnscrypt-wrapper): New variable.
2016-12-02 16:58:31 +01:00
Marius Bakke 5834a405ea
gnu: virt-manager: Do not use python setuptools for building.
* gnu/packages/qemu.scm (virt-manager)[arguments]: Set #use-setuptools? to #f.
2016-12-02 13:27:09 +01:00
Marius Bakke a189ac715d
gnu: bluez: Update to 5.43.
* gnu/packages/linux.scm (bluez): Update to 5.43.
2016-12-02 13:08:11 +01:00
Marius Bakke 17f2b485b1
gnu: mesa: Update to 13.0.2.
* gnu/packages/gl.scm (mesa): Update to 13.0.2.
[inputs]: Remove eudev.
[native-inputs]: Move 'mesa-wayland-egl-symbols-check-mips.patch' to ...
[source]: ... here.
[arguments]: Don't apply patch. Remove udev substitution.
2016-12-02 12:16:15 +01:00
Marius Bakke 2028be238b
gnu: dblatex: Update to 0.3.9.
* gnu/packages/docbook.scm (dblatex): Update to 0.3.9.
2016-12-02 12:01:42 +01:00
Marius Bakke 000c5a1163
gnu: libsigc++: Update to 2.10.0.
* gnu/packages/glib.scm (libsigc++): Update to 2.10.0.
2016-12-02 11:40:41 +01:00
Leo Famulari cb8edaac35
gnu: go-1.7: Update to 1.7.4 [security fixes].
* gnu/packages/golang.scm (go-1.7): Update to 1.7.4.
2016-12-02 03:52:06 -05:00
Eric Bavier 786b66ef75
gnu: vtk: Build with more system libraries.
* gnu/packages/vtk.scm (vtk)[inputs]: Add expat, freetype, hdf5, jpeg,
png, tiff, jsoncpp, libogg, libtheora, and zlib.
[arguments]: Use #:build-type keyword.  Add cmake flags for system
libraries.
2016-12-01 23:50:17 -06:00
Eric Bavier 0e988a8483
gnu: vtk: Upgrade to 7.1.0.
* gnu/packages/vtk.scm (vtk): Upgrade to 7.1.0.
[source]: Remove patches.  Use version-major+minor.
* gnu/packages/patches/vtk-mesa-10.patch: Delete patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-12-01 23:50:17 -06:00
Eric Bavier 996f5ece8c
gnu: jsoncpp: Build shared libraries.
* gnu/packages/serialization.scm (jsoncpp)[arguments]: New field.
2016-12-01 23:50:17 -06:00
Eric Bavier a4b0bfb195
gnu: netcdf: Upgrade to 4.4.1.1.
* gnu/packages/maths.scm (netcdf, netcdf-parallel-openmpi): Upgrade to
4.4.1.1.
[source]: Adjust patch name, add netcdf-tst_h_par.patch
* gnu/packages/patches/netcdf-config.date.patch: Rename to...
* gnu/packages/patches/netcdf-date-time.patch: ...this.  Adjust for
latest source.
* gnu/packages/patches/netcdf-tst_h_par.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Adjust patches.
2016-12-01 23:50:09 -06:00
Efraim Flashner b45baef156
gnu: offlineimap: Update to 7.0.12.
* gnu/packages/mail.scm (offlineimap): Update to 7.0.12.
2016-12-02 07:41:03 +02:00
Marius Bakke 3cc0342b45
gnu: dblatex: Do not use python setuptools for building.
* gnu/packages/docbook.scm (dblatex)[arguments]: Set #:use-setuptools?
to false.
2016-12-01 23:43:37 +01:00
Tomáš Čech 4b67098d9a
gnu: Add uget.
* gnu/packages/bittorrent.scm (uget): New variable.
2016-12-01 21:05:20 +01:00
David Thompson 02ecdeaa02
gnu: ardour: Update to 5.5.
* gnu/packages/audio.scm (ardour): Update to 5.5.
2016-12-01 13:22:24 -05:00
Efraim Flashner 329e432d60
gnu: python-gst: Update to 1.10.2.
* gnu/packages/gstreamer.scm (python-gst): Update to 1.10.2.
2016-12-01 12:56:23 +02:00
Efraim Flashner 68c2ab8c22
gnu: gst-libav: Update to 1.10.2.
* gnu/packages/gstreamer.scm (gst-libav): Update to 1.10.2.
2016-12-01 12:55:45 +02:00
Efraim Flashner acc4d15c0d
gnu: gst-plugins-ugly: Update to 1.10.2.
* gnu/packages/gstreamer.scm (gst-plugins-ugly): Update to 1.10.2.
2016-12-01 12:55:09 +02:00
Efraim Flashner 3103a71f65
gnu: gst-plugins-bad: Update to 1.10.2.
* gnu/packages/gstreamer.scm (gst-plugins-bad): Update to 1.10.2.
2016-12-01 12:54:19 +02:00
Efraim Flashner 1742132fb1
gnu: gst-plugins-good: Update to 1.10.2.
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.10.2.
[source]: Remove patches.
* gnu/packages/patches/gst-plugins-good-fix-crashes.patch,
gnu/packages/patches/gst-plugins-good-fix-invalid-read.patch,
gnu/packages/patches/gst-plugins-good-fix-signedness.patch,
gnu/packages/patches/gst-plugins-good-flic-bounds-check.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2016-12-01 12:53:30 +02:00
Efraim Flashner 2f0b72af50
gnu: gst-plugins-base: Update to 1.10.2.
* gnu/packages/gstreamer.scm (gst-plugins-base): Update to 1.10.2.
2016-12-01 12:50:30 +02:00
Efraim Flashner a8ce5851ce
gnu: gstreamer: Update to 1.10.2.
* gnu/packages/gstreamer.scm (gstreamer): Update to 1.10.2.
2016-12-01 12:49:32 +02:00
Efraim Flashner d0b9c34fb3
gnu: perl-catalyst-action-rest: Change to new uri.
This is a followup to abafd66d04.

* gnu/packages/web.scm (perl-catalyst-action-rest)[source]: Update to
new source uri.
2016-12-01 12:44:44 +02:00
Efraim Flashner 9469275790
gnu: perl-catalyst-view-tt: Change source uri.
This is a followup to 776ca1cb22.

* gnu/packages/web.scm (perl-catalyst-view-tt)[source]: Change to new
source uri.
2016-12-01 12:44:44 +02:00
Efraim Flashner 08af1a420a
gnu: perl-http-server-simple: Change source uri.
This is a followup to 5b3646f100.

* gnu/packages/web.scm (perl-http-server-simple)[source]: Update to new
source uri.
2016-12-01 12:44:43 +02:00
Ricardo Wurmus 084f8e0435
gnu: perl-http-message: Update URLs.
* gnu/packages/web.scm (perl-http-message)[source]: Update URL.
[home-page]: Likewise.
2016-12-01 11:07:13 +01:00
Andy Patterson 4ce8860df9
services: cups: Follow symlinks when installing extensions.
* gnu/services/cups.scm (union-directory): Use "stat" when calling
"find-files" to follow symlinks.
2016-12-01 11:03:20 +01:00
Efraim Flashner 8e9badce00
gnu: nasm: Update to 2.12.02.
* gnu/packages/assembly.scm (nasm): Update to 2.12.02.
2016-12-01 10:50:46 +02:00
Efraim Flashner 161fb9be8e
gnu: nasm: Switch patch to phase.
* gnu/packages/assembly.scm (nasm)[source]: Remove patch.
[arguments]: Disable ps and pdf doc outputs in new phase.
* gnu/packages/patches/nasm-no-ps-pdf.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-12-01 10:47:29 +02:00
Efraim Flashner 4181c9393d
gnu: nasm: Allow building on all systems.
* gnu/packages/assembly.scm (nasm)[supported-systems]: Remove field.
2016-12-01 09:46:56 +02:00
Mark H Weaver 9689e71d2f
gnu: icecat: Add fixes for CVE-2016-9079 and other bugs.
* gnu/packages/gnuzilla.scm (icecat)[source][patches]: Add fixes for
CVE-2016-9079 and other selected fixes from the upstream mozilla-esr45
repository.
2016-11-30 20:51:05 -05:00
Mark H Weaver a9427ce556
gnu: linux-libre: Update to 4.8.11.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.11.
2016-11-30 20:24:07 -05:00
Mark H Weaver 7d9df7ca22
gnu: linux-libre@4.4: Update to 4.4.35.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.35.
2016-11-30 20:23:11 -05:00
Tobias Geerinckx-Rice e0593466a1
gnu: btrfs-progs: Update to 4.8.5.
* gnu/packages/linux.scm (btrfs-progs): Update to 4.8.5.
2016-12-01 01:42:30 +01:00
Ludovic Courtès d30e578a00
gnu: Add Nagios.
* gnu/packages/monitoring.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-11-30 23:31:03 +01:00
Efraim Flashner ee264bbf90
gnu: perl-http-tiny: Update to 0.070.
* gnu/packages/web.scm (perl-http-tiny): Update to 0.070.
[propagated-inputs]: Add perl-mozilla-ca.
2016-11-30 21:45:18 +02:00
Efraim Flashner 5b3646f100
gnu: perl-http-server-simple: Update to 0.51.
* gnu/packages/web.scm (perl-http-server-simple): Update to 0.51.
2016-11-30 21:39:51 +02:00
Efraim Flashner a8a7227b7d
gnu: perl-http-message: Update to 6.11.
* gnu/packages/web.scm (perl-http-message): Update to 6.11.
[propagated-inputs]: Add perl-encode-locale.
2016-11-30 21:37:10 +02:00
Efraim Flashner 1ade054c2e
gnu: perl-http-cookiejar: Update to 0.008.
* gnu/packages/web.scm (perl-http-cookiejar): Update to 0.008.
[native-inputs]: Add perl-uri.
2016-11-30 21:33:05 +02:00
Efraim Flashner fb332b15aa
gnu: perl-libwww: Update to 6.15.
* gnu/packages/web.scm (perl-libwww): Update to 6.15.
[propagated-inputs]: Add perl-http-date, perl-http-message, perl-uri.
2016-11-30 21:26:50 +02:00
Efraim Flashner 1bb8ca409a
gnu: perl-http-body: Update to 1.22.
* gnu/packages/web.scm (perl-http-body): Update to 1.22.
2016-11-30 21:26:50 +02:00
Efraim Flashner 3700b27dc6
gnu: perl-html-parser: Update to 3.72.
* gnu/packages/web.scm (perl-html-parser): Update to 3.72.
[inputs]: Add perl-http-message.
2016-11-30 21:26:49 +02:00
Efraim Flashner 97c0cfdc3f
gnu: perl-finance-quote: Update to 1.38.
* gnu/packages/web.scm (perl-finance-quote): Update to 1.38.
2016-11-30 21:26:49 +02:00
Efraim Flashner 85b9c18b1a
gnu: perl-encode-locale: Update to 1.05.
* gnu/packages/web.scm (perl-encode-locale): Update to 1.05.
2016-11-30 21:26:48 +02:00
Efraim Flashner caa0194434
gnu: perl-cgi: Update to 4.35.
* gnu/packages/web.scm (perl-cgi): Update to 4.35.
2016-11-30 21:26:48 +02:00
Efraim Flashner 776ca1cb22
gnu: perl-catalyst-view-tt: Update to 0.44.
* gnu/packages/web.scm (perl-catalyst-view-tt): Update to 0.44.
[propagated-inputs]: Add perl-data-dump.
2016-11-30 21:26:48 +02:00
Efraim Flashner 0018eb57c9
gnu: perl-catalyst-view-json: Update to 0.36.
* gnu/packages/web.scm (perl-catalyst-view-json): Update to 0.36.
2016-11-30 21:26:48 +02:00
Efraim Flashner e8b20020ba
gnu: perl-catalyst-plugin-session: Update to 0.40.
* gnu/packages/web.scm (perl-catalyst-plugin-session): Update to 0.40.
[propagated-inputs]: Add perl-mro-compat.
2016-11-30 21:26:47 +02:00
Efraim Flashner 9fc4145211
gnu: perl-catalyst-plugin-accesslog: Update to 1.10.
* gnu/packages/web.scm (perl-catalyst-plugin-accesslog): Update to 1.10.
[arguments]: Enable tests.
2016-11-30 21:26:47 +02:00
Efraim Flashner abafd66d04
gnu: perl-catalyst-action-rest: Update to 1.20.
* gnu/packages/web.scm (perl-catalyst-action-rest): Update to 1.20.
[propagated-inputs]: Add perl-config-general, perl-cpanel-json-xs,
perl-xml-simple.
2016-11-30 21:26:47 +02:00
Efraim Flashner faf806dba9
gnu: perl-apache-logformat-compiler: Update to 0.33.
* gnu/packages/web.scm (perl-apache-logformat-compiler): Update to 0.33.
2016-11-30 21:26:47 +02:00
Efraim Flashner 1b49fc8fc3
gnu: perl-email-sender: Update to 1.300028.
* gnu/packages/mail.scm (perl-email-sender): Update to 1.300028.
2016-11-30 21:26:46 +02:00
Efraim Flashner 47b4cedf5d
gnu: perl-xml-xpath: Update to 1.40.
* gnu/packages/xml.scm (perl-xml-xpath): Update to 1.40.
2016-11-30 21:26:46 +02:00
Efraim Flashner 28a3b6b42c
gnu: perl-xml-compile-wsdl11: Update to 3.05.
* gnu/packages/xml.scm (perl-xml-compile-wsdl11): Update to 3.05.
2016-11-30 21:26:46 +02:00
Efraim Flashner 0c3e27a4f4
gnu: perl-xml-compile-soap: Update to 3.20.
* gnu/packages/xml.scm (perl-xml-compile-soap): Update to 3.20.
2016-11-30 21:26:45 +02:00
Efraim Flashner 6b9d3f5539
gnu: perl-xml-compile-cache: Update to 1.05.
* gnu/packages/xml.scm (perl-xml-compile-cache): Update to 1.05.
2016-11-30 21:26:45 +02:00
Efraim Flashner 18c832b02e
gnu: perl-xml-compile: Update to 1.54.
* gnu/packages/xml.scm (perl-xml-compile): Update to 1.54.
2016-11-30 21:26:45 +02:00
Efraim Flashner 4e5465f255
gnu: perl-xml-dom: Update to 1.46.
* gnu/packages/xml.scm (perl-xml-dom): Update to 1.46.
[propagated-inputs]: Add perl-xml-parser.
2016-11-30 21:26:45 +02:00
Efraim Flashner f3aa34cc5a
gnu: perl-xml-libxml-simple: Update to 0.97.
* gnu/packages/xml.scm (perl-xml-libxml-simple): Update to 0.97.
2016-11-30 21:26:44 +02:00
Efraim Flashner ffbc7d6553
gnu: perl-graph-readwrite: Update to 2.09.
* gnu/packages/xml.scm (perl-graph-readwrite): Update to 2.09.
2016-11-30 21:26:44 +02:00
Efraim Flashner 467d4c85c3
gnu: perl-dbd-sqlite: Update to 1.52.
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.52.
2016-11-30 21:26:44 +02:00
Efraim Flashner ebd2dbbfc1
gnu: perl-dbix-class-schema-loader: Update to 0.07046.
* gnu/packages/databases.scm (perl-dbix-class-schema-loader):
Update to 0.07046.
2016-11-30 21:26:43 +02:00
Efraim Flashner 7a462b8023
gnu: perl-dbix-class-introspectablem2m: Update to 0.001002.
* gnu/packages/databases.scm (perl-dbix-class-introspectablem2m):
Update to 0.001002.
2016-11-30 21:26:43 +02:00
Efraim Flashner 180cb81b4c
gnu: perl-dbix-class-cursor-cached: Update to 1.001004.
* gnu/packages/databases.scm (perl-dbix-class-cursor-cached):
Update to 1.001004.
2016-11-30 21:26:43 +02:00
Efraim Flashner 5d78d746af
gnu: perl-dbix-class: Update to 0.082840.
* gnu/packages/databases.scm (perl-dbix-class): Update to 0.082840.
2016-11-30 21:26:43 +02:00
Efraim Flashner f363d5d854
gnu: perl-email-simple: Update to 2.211.
* gnu/packages/mail.scm (perl-email-simple): Update to 2.211.
2016-11-30 21:26:42 +02:00
Efraim Flashner e4146b0485
gnu: perl-namespace-autoclean: Update to 0.28.
* gnu/packages/perl.scm (perl-namespace-autoclean): Update to 0.28.
2016-11-30 21:26:42 +02:00
Efraim Flashner 199bbbe1ed
gnu: perl-class-method-modifiers: Update to 2.12.
* gnu/packages/perl.scm (perl-class-method-modifiers): Update to 2.12.
2016-11-30 21:26:42 +02:00
Efraim Flashner a883ba0246
gnu: perl-email-mime-contenttype: Update to 1.018.
* gnu/packages/mail.scm (perl-email-mime-contenttype): Update to 1.018.
2016-11-30 21:26:41 +02:00
Efraim Flashner b4522b9855
gnu: perl-email-mime: Update to 1.937.
* gnu/packages/mail.scm (perl-email-mime): Update to 1.937.
2016-11-30 21:26:41 +02:00
Efraim Flashner 1fb37ef06e
gnu: perl-email-messageid: Update to 1.406.
* gnu/packages/mail.scm (perl-email-messageid): Update to 1.406.
2016-11-30 21:26:41 +02:00
Efraim Flashner 151bba2b3d
gnu: perl-email-address: Update to 1.908.
* gnu/packages/mail.scm (perl-email-address): Update to 1.908.
2016-11-30 21:26:41 +02:00
Marius Bakke bc118f1a03
gnu: cairo: Eliminate graft.
* gnu/packages/gtk.scm (cairo)[replacement]: Remove field.
[source]: Add patch from 'cairo/fixed'.
(cairo-xcb)[source]: Inherit from cairo.
[replacement]: Remove field.
(cairo/fixed): Remove variable.
* gnu/packages/pdf.scm (poppler)[inputs]: Remove cairo replacement.
2016-11-30 18:31:37 +01:00
Marius Bakke 8b6aee5f82
gnu: dbus: Update to 1.10.14.
* gnu/packages/glib.scm (dbus): Update to 1.10.14.
2016-11-30 18:26:15 +01:00
Marius Bakke 86cf191426
gnu: dbus: Eliminate graft.
* gnu/packages/glib.scm (dbus)[replacement]: Remove field.
[version]: Update to 1.10.12.
[source]: Update hash.
(dbus-1.10.12): Remove variable.
2016-11-30 18:26:05 +01:00
Marius Bakke 35bbe88b3c
gnu: pixman: Eliminate graft.
* gnu/packages/xdisorg.scm (pixman)[replacement]: Remove field.
[source]: Add patch from 'pixman/fixed'.
(pixman/fixed): Remove variable.
2016-11-30 18:25:57 +01:00
Marius Bakke 8a7cbc882a
Merge branch 'master' into staging 2016-11-30 18:24:32 +01:00
Ludovic Courtès 72f0c5ea3c
gnu: iw: Update to 4.9.
* gnu/packages/linux.scm (iw): Update to 4.9.
2016-11-30 17:35:21 +01:00
Ludovic Courtès 873c469e74
gnu: pciutils: Update to 3.5.2.
* gnu/packages/pciutils.scm (pciutils): Update to 3.5.2.
2016-11-30 17:35:21 +01:00
Ludovic Courtès 130079ae27
tests: Create a copy-on-write image instead of copying eagerly.
* gnu/tests/install.scm (qemu-command/writable-image): Invoke 'qemu-img
-o backing_file' instead of calling 'copy-file'.
2016-11-30 17:35:20 +01:00
Leo Famulari dcd9d1637a
gnu: hdf5: Update to 1.8.18 [fixes CVE-2016-{4330,4331,4332,4333}].
* gnu/packages/maths.scm (hdf5): Update to 1.8.18.
[source]: Add alternate URL.
2016-11-30 11:16:18 -05:00
Ricardo Wurmus 819c1945d1
services: nginx: Join strings with spaces.
* gnu/services/web.scm (config-domain-strings, config-index-strings):
Use "string-join" to join strings with spaces.
2016-11-30 16:03:18 +01:00
Ricardo Wurmus 7edd195ac8
gnu: gcj: Conditionally apply patch for armhf.
* gnu/packages/gcc.scm (gcj)[source]: Inherit from "gcc" package.
[native-inputs]: Conditionally add arm-patch.
[arguments]: Conditionally add phase "apply-arm-patch".
2016-11-30 16:03:11 +01:00
Leo Famulari 1d60f7c2b3
gnu: borg: Fix the test suite.
* gnu/packages/backup.scm (borg)[arguments]: Use
add-installed-pythonpath and disable tests related to FUSE.
2016-11-30 01:52:16 -05:00
Leo Famulari 663d5b5330
gnu: git: Update to 2.11.0.
* gnu/packages/version-control.scm (git): Update to 2.11.0.
2016-11-29 23:54:37 -05:00
Mathieu Lirzin a7cf4eb6d9
services: Add 'cuirass-service'.
* gnu/services/cuirass.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Continuous integration): New node.
2016-11-29 23:13:11 +01:00
Mathieu Lirzin 365de1e7a5
gnu: Add Cuirass.
* gnu/packages/ci.scm (cuirass): New variable.

Co-authored-by: Jan Nieuwenhuizen <janneke@gnu.org>
2016-11-29 23:10:11 +01:00
David Craven 43ddcd723e
gnu: guix-0.11.0: Add guile-ssh to inputs.
* gnu/packages/package-management.scm (guile-ssh)[inputs]: Add
  guile-ssh.
  [arguments]: Add guile-ssh to GUILE_LOAD_PATH.
2016-11-29 22:40:03 +01:00
Ricardo Wurmus a19a6d3ac8
gnu: frescobaldi: Disable tests.
* gnu/packages/music.scm (frescobaldi)[arguments]: Disable tests.
2016-11-29 22:06:50 +01:00
John Darrington 660516e875
gnu: Add zzuf
* gnu/packages/debug.scm (zzuf): New variable.
2016-11-29 21:32:09 +01:00
Tobias Geerinckx-Rice 3084a99084
gnu: libxi: Update to 1.7.8.
* gnu/packages/xorg.scm (libxi): Update to 1.7.8.
2016-11-29 19:16:15 +01:00
Tobias Geerinckx-Rice 7f81d7f4a5
gnu: libxfont: Update to 1.5.2.
* gnu/packages/xorg.scm (libxfont): Update to 1.5.2.
2016-11-29 19:15:48 +01:00
Tobias Geerinckx-Rice 7e49a851b5
gnu: gphoto2, libgphoto2: Use libjpeg-turbo.
* gnu/packages/photo.scm (gphoto2, libgphoto2)[inputs]: Add libjpeg-turbo.
2016-11-29 19:15:47 +01:00
Tobias Geerinckx-Rice 9b81876f5f
gnu: spice: Use libjpeg-turbo instead of libjpeg.
* gnu/packages/spice.scm (spice)[inputs]: Use libjpeg-turbo as suggested
during the build.
2016-11-29 19:15:47 +01:00
Tobias Geerinckx-Rice 7cba7647a5
gnu: icecat: Use libjpeg-turbo instead of bundled libjpeg.
* gnu/packages/gnuzilla.scm (icecat)[source]: Remove bundled libjpeg, which
is actually libjpeg-turbo.
[inputs]: Add libjpeg-turbo.
[arguments]: Use it.
2016-11-29 19:15:47 +01:00
Tobias Geerinckx-Rice 37e05d64e4
gnu: Add libjpeg-turbo.
* gnu/packages/image.scm (libjpeg-turbo): New variable.
2016-11-29 19:15:47 +01:00
Hartmut Goebel dc2ef09ad7
gnu: kauth: Fix cmake macros to be used by other packages.
* gnu/packages/kde-framework.scm (kauth)[phases]: New phase
  fix-cmake-install-paths.
2016-11-29 19:13:40 +01:00
Hartmut Goebel 7b722e3cba
gnu: extra-cmake-modules: Always install into /lib and not into /lib64.
* gnu/packages/kde-frameworks.scm (extra-cmake-modules)[phases]:
  New phase fix-lib-path.
2016-11-29 19:11:09 +01:00
Hartmut Goebel c1265fcc70
gnu: Add ksyntaxhighlighting.
* gnu/packages/kde-frameworks.scm (ksyntaxhighlighting): New variable.
2016-11-29 19:11:09 +01:00
Hartmut Goebel 7feff6f6dc
gnu: Update kde-frameworks to 5.28.
* gnu/packages/kde-frameworks.scm (kpackage): Update to 5.28.1
  (extra-cmake-modules, attica, bluez-qt, breeze-icons, kapidox,
  karchive, kcodecs, kconfig, kcoreaddons, kdbusaddons, kdnssd,
  kguiaddons, ki18n, kidletime, kitemmodels, kitemviews, kplotting,
  kwayland, kwidgetsaddons, kwindowsystem, modemmanager-qt,
  networkmanager-qt, oxygen-icons, solid, sonnet, threadweaver, kauth,
  kcompletion, kcrash, kdoctools, kfilemetadata, kimageformats,
  kjobwidgets, knotifications, kpty, kunitconversion, baloo,
  kactivities, kactivities-stats, kbookmarks, kcmutils,
  kconfigwidgets, kdeclarative, kded, kdesignerplugin, kdesu,
  kemoticons, kglobalaccel, kiconthemes, kinit, kio, knewstuff,
  knotifyconfig, kparts, kpeople, krunner, kservice, ktexteditor,
  ktextwidgets, kwallet, kxmlgui, kxmlrpcclient, plasma-framework,
  frameworkintegration): Update to 5.28.0
2016-11-29 19:11:09 +01:00
Hartmut Goebel 03e856ddf5
Merge branch 'python-build-system'. 2016-11-29 19:06:27 +01:00
Hartmut Goebel 80983df357
gnu: python2-discogs-client: Remove python2-setuptools from inputs.
* gnu/packages/music.scm (python2-discogs-client): Use simply
  "package-with-python2". Remove inheriting from python-discogs-client
  since adding python2-setuptools to [native-inputs] has been the sole
  reason for inheriting.
  (python-discogs-client) Remove the now needless [properties]
  "python2-variant".
2016-11-29 19:02:35 +01:00
Efraim Flashner 072f1e22cc
gnu: dovecot: Update to 2.2.26.0.
* gnu/packages/mail.scm (dovecot): Update to 2.2.26.0.
[arguments]: Patch shebangs in test file.
2016-11-29 19:52:21 +02:00
Hartmut Goebel 3bf4280659
Merge branch 'master' into python-build-system 2016-11-29 18:47:16 +01:00
Hartmut Goebel 2cb64f3b1b
gnu: wicd: Fix build.
* gnu/packages/wicd.scm (wicd) [arguments]: Disable installation
  via setuptools (and --single-version-externally-managed).
2016-11-29 18:39:16 +01:00
Hartmut Goebel 388606a72b
gnu: wxPython: Remove useless inputs.
* gnu/packages/wxwidgets.scm (python2-wxpython) [native-inputs]: Remove
  setuptools, which is already included in python.
2016-11-29 18:39:15 +01:00
Hartmut Goebel 6f1dcafd81
gnu: wxPython: Fix build.
* gnu/packages/wxwidgets.scm (python2-wxpython) [arguments]: Disable
  installation via setuptools (and --single-version-externally-managed).
2016-11-29 18:39:14 +01:00
Ludovic Courtès 683c5ab70a
gnu: oxygen-icons: Add 'upstream-name' property.
Fixes <http://bugs.gnu.org/25020>.
Reported by Hartmut Goebel <h.goebel@goebel-consult.de>.

* gnu/packages/kde-frameworks.scm (oxygen-icons)[properties]: New
field.
2016-11-29 16:12:32 +01:00
Efraim Flashner a409de9811
gnu: efl: Update to 1.18.3.
* gnu/packages/enlightenment.scm (efl): Update to 1.18.3.
2016-11-29 16:12:47 +02:00
Efraim Flashner 07cda02c5b
gnu: wine: Use 'modify-phases' syntax.
* gnu/packages/wine.scm (wine)[arguments]: Use 'modify-phases' syntax.
2016-11-29 16:12:47 +02:00
Efraim Flashner 658c987fdd
gnu: wine: Update to 1.9.24.
* gnu/packages/wine.scm (wine): Update to 1.9.24.
[home-page]: Use https.
2016-11-29 16:12:41 +02:00
Ricardo Wurmus ded69d6f86
gnu: Add non-session-manager.
* gnu/packages/music.scm (non-session-manager): New variable.
2016-11-29 10:59:17 +01:00
Efraim Flashner 0944bb1a6a
gnu: offlineimap: Update to 7.0.10.
* gnu/packages/mail.scm (offlineimap): Update to 7.0.10.
2016-11-29 11:02:39 +02:00
Efraim Flashner c51d926c74
gnu: cairo: Fix CVE-2016-9082.
* gnu/packages/gtk.scm (cairo)[replacement]: New field.
(cairo/fixed): New variable.
(cairo-xcb)[source]: Use patch.
[replacement]: New field, set false.
* gnu/packages/pdf.scm (poppler)[inputs]: Custom cairo should be
replaced by a new custom patched cairo.
* gnu/packages/patches/cairo-CVE-2016-9082.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2016-11-29 09:45:48 +02:00
Efraim Flashner eb55f01821
gnu: Add viewnior.
* gnu/packages/image-viewers.scm (viewnior): New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-11-29 09:38:33 +02:00
Efraim Flashner 22486fbea6
gnu: Add wgetpaste.
* gnu/packages/wget.scm (wgetpaste): New variable.
2016-11-29 09:35:39 +02:00
Efraim Flashner 3e757c005f
gnu: aspell-dict-en: Update to 2016.11.20-0.
* gnu/packages/aspell.scm (aspell-dict-en): Update to 2016.11.20-0.
2016-11-29 09:35:11 +02:00
John Darrington 0c85db79f7
gnu: Allow nfs file systems to be automatically mounted.
* gnu/build/file-systems.scm (mount-file-system): Append target addr= when
mounting nfs filesystems.
2016-11-29 07:21:15 +01:00
Marius Bakke 7c635ed6f7
gnu: perl-dbd-mysql: Update to 4.041 [security fix].
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.041.
[source]: Update CPAN URI.
2016-11-28 23:05:23 +01:00
Ludovic Courtès d2bcf35e18
vm: Avoid needless file copy in 'load-in-linux-vm'.
Reported by Chris Webber.

* gnu/build/vm.scm (load-in-linux-vm)[image-file]: Remove.  Directly
refer to OUTPUT instead.
2016-11-28 22:58:18 +01:00
Ricardo Wurmus bd3be46e7f
gnu: Add r-gkmsvm.
* gnu/packages/bioinformatics.scm (r-gkmsvm): New variable.
2016-11-28 22:43:18 +01:00
Ricardo Wurmus 419a8a186f
gnu: Add r-rocr.
* gnu/packages/statistics.scm (r-rocr): New variable.
2016-11-28 22:43:18 +01:00
Ricardo Wurmus 0cfe0570f2
gnu: Add r-gplots.
* gnu/packages/statistics.scm (r-gplots): New variable.
2016-11-28 22:43:18 +01:00
Ricardo Wurmus 6034cd905e
gnu: Add r-gdata.
* gnu/packages/statistics.scm (r-gdata): New variable.
2016-11-28 22:43:18 +01:00
Ricardo Wurmus 2d9fb1702f
gnu: Add r-seqgl.
* gnu/packages/bioinformatics.scm (r-seqgl): New variable.
2016-11-28 22:43:17 +01:00
Ricardo Wurmus c827f20286
gnu: Add r-chipkernels.
* gnu/packages/bioinformatics.scm (r-chipkernels): New variable.
2016-11-28 22:43:17 +01:00
Ricardo Wurmus 1571f90e35
gnu: Add r-gtools.
* gnu/packages/statistics.scm (r-gtools): New variable.
2016-11-28 22:43:17 +01:00
Ricardo Wurmus f05c7eb48d
gnu: Add r-kernlab.
* gnu/packages/machine-learning.scm (r-kernlab): New variable.
2016-11-28 22:43:17 +01:00
Ricardo Wurmus 6335bf1c80
gnu: Add r-sfsmisc.
* gnu/packages/statistics.scm (r-sfsmisc): New variable.
2016-11-28 22:43:17 +01:00
Ricardo Wurmus d71605294f
gnu: Add r-wgcna.
* gnu/packages/bioinformatics.scm (r-wgcna): New variable.
2016-11-28 22:43:17 +01:00
Ricardo Wurmus 1bd46f5520
gnu: Add r-fastcluster.
* gnu/packages/statistics.scm (r-fastcluster): New variable.
2016-11-28 22:43:16 +01:00
Ricardo Wurmus c4708783ee
gnu: Add r-preprocesscore.
* gnu/packages/statistics.scm (r-preprocesscore): New variable.
2016-11-28 22:43:16 +01:00
Ricardo Wurmus c9a6671490
gnu: Add r-dynamictreecut.
* gnu/packages/statistics.scm (r-dynamictreecut): New variable.
2016-11-28 22:43:16 +01:00
Ricardo Wurmus e619a5c245
gnu: Add r-r4rna.
* gnu/packages/bioinformatics.scm (r-r4rna): New variable.
2016-11-28 22:43:16 +01:00
Ricardo Wurmus e7d16ad161
gnu: Add r-spams.
* gnu/packages/statistics.scm (r-spams): New variable.
2016-11-28 22:43:16 +01:00
Ricardo Wurmus 9f5435d963
gnu: Add r-googlesheets.
* gnu/packages/statistics.scm (r-googlesheets): New variable.
2016-11-28 22:43:16 +01:00
Ricardo Wurmus d427e03eee
gnu: Add r-cellranger.
* gnu/packages/statistics.scm (r-cellranger): New variable.
2016-11-28 22:43:15 +01:00
Ricardo Wurmus 58612fd2c8
gnu: Add r-rematch.
* gnu/packages/statistics.scm (r-rematch): New variable.
2016-11-28 22:43:15 +01:00
Ricardo Wurmus e48ddb9628
doc: Suggest installing gvfs.
* gnu/system/examples/desktop.tmpl: Add gvfs to the system-wide list of
packages.
2016-11-28 22:09:38 +01:00
Ricardo Wurmus eb21d24806
gnu: lv2: Update to 1.14.0.
* gnu/packages/audio.scm (lv2): Update to 1.14.0.
2016-11-28 22:08:37 +01:00
Ricardo Wurmus 1bbe79594e
gnu: non-sequencer: Update to 1.9.5-2.a22f33f.
* gnu/packages/music.scm (non-sequencer): Update to 1.9.5-2.a22f33f.
2016-11-28 22:07:20 +01:00
Efraim Flashner 5e9cce55b5
gnu: ntp: Update to 4.2.8p9.
* gnu/packages/ntp.scm (ntp): Update to 4.2.8p9.
2016-11-28 21:56:30 +02:00
Efraim Flashner d35de59b64
gnu: ntp: Fix indentation.
* gnu/packages/ntp.scm (ntp): Fix indentation to only use spaces.
2016-11-28 20:53:14 +02:00
John Darrington f0ddc5e55b
gnu: Add editres.
* gnu/packages/xorg.scm (editres): New variable.
2016-11-28 18:22:15 +01:00
Ben Woodcroft 9926875572
gnu: Add newick-utils.
* gnu/packages/bioinformatics.scm (newick-utils): New variable.
2016-11-28 09:00:41 +10:00
Efraim Flashner c7a70c336f
gnu: jasper: Update to 2.0.0 [fixes security issues].
* gnu/packages/image.scm (jasper): Update to 2.0.0.
[build-system]: Switch to cmake-build-system.
2016-11-27 22:19:55 +02:00
Tobias Geerinckx-Rice f6c44a3f04
gnu: gphoto2: Update to 2.5.11.
* gnu/packages/photo.scm (gphoto2): Update to 2.5.11.
2016-11-27 20:58:18 +01:00
Tobias Geerinckx-Rice 69874f5fd2
gnu: libgphoto2: Update to 2.5.11.
* gnu/packages/photo.scm (libgphoto2): Update to 2.5.11.
2016-11-27 20:58:18 +01:00
Leo Famulari f27ec24d88
gnu: beets: Update to 1.4.1.
* gnu/packages/music.scm (beets): Update to 1.4.1.
[inputs]: Add python2-discogs-client.
2016-11-27 14:49:36 -05:00
Leo Famulari d3db5efbf9
gnu: Add python-discogs-client.
* gnu/packages/music.scm (python-discogs-client,
python2-discogs-client): New variables.
2016-11-27 14:49:36 -05:00
Leo Famulari 6782444764
gnu: python-rarfile: Update to 2.8.
* gnu/packages/python.scm (python-rarfile, python2-rarfile): Update to 2.8.
[source]: Remove obsolete patch.
* gnu/packages/patches/python-rarfile-fix-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-11-27 14:49:35 -05:00
Leo Famulari 8c4964dd51
gnu: python-jellyfish: Update to 0.5.6.
* gnu/packages/python.scm (python-jellyfish, python2-jellyfish): Update to
0.5.6.
2016-11-27 14:49:35 -05:00
Leo Famulari b04d9b97c4
gnu: python-pylast: Update 1.6.0.
* gnu/packages/music.scm (python-pylast, python2-pylast): Update to 1.6.0.
2016-11-27 14:49:35 -05:00
Leo Famulari daedf34db9
gnu: python-musicbrainzngs: Update to 0.6.
* gnu/packages/music.scm (python-musicbrainzngs, python2-musicbrainzngs): Update
to 0.6.
[arguments]: Disable the test suites.
2016-11-27 14:49:35 -05:00
Leo Famulari 38e81a2c55
gnu: python-munkres: Update to 1.0.8.
* gnu/packages/python.scm (python-munkres, python2-munkres): Update to 1.0.8.
2016-11-27 14:49:34 -05:00
Leo Famulari 4228a79e6f
gnu: python-mutagen: Update to 1.35.1.
* gnu/packages/music.scm (python-mutagen, python2-mutagen): Update to 1.35.1.
[native-inputs]: Add python-pytest.
2016-11-27 14:49:30 -05:00
Ricardo Wurmus 1bf5a7e920
gnu: gcj: Inherit source field from "gcc".
* gnu/packages/gcc.scm (gcj)[source]: Inherit source from "gcc" package.
2016-11-27 19:00:57 +01:00
Ricardo Wurmus bac6409970
gnu: gcj: Correct paths in ARM patch.
* gnu/packages/patches/gcj-arm-mode.patch: Strip directories.
2016-11-27 18:59:54 +01:00
Marius Bakke 8c4140e49e
gnu: notmuch: Update to 0.23.3.
* gnu/packages/mail.scm (notmuch): Update to 0.23.3.
[arguments]: Re-enable previously failing tests.
2016-11-27 18:29:44 +01:00
Leo Famulari cd569f0d29
gnu: gcj: Fix typo in patch filename.
This is a followup to commit dbf8f84f15.

Reported by quigonjinn on #guix.

* gnu/packages/gcc.scm (gcj)[source]: Fix typo.
2016-11-27 10:57:33 -05:00
Danny Milosavljevic 7574cecf0f
gnu: python2-flask: Pick up python-flask's native-inputs.
* gnu/packages/python.scm (python2-flask)[native-inputs]:
  Pick up python-flask's native-inputs.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-27 13:23:53 +01:00
Marius Bakke cf7daaf5da
gnu: docbook-xsl: Update to 1.79.1.
* gnu/packages/docbook.scm (docbook-xsl): Update to 1.79.1.
2016-11-27 11:26:49 +01:00
Marius Bakke 988e1dca4b
gnu: udisks: Update to 2.1.8.
* gnu/packages/freedesktop.scm (udisks): Update to 2.1.8.
[home-page]: Use HTTPS.
2016-11-27 11:13:50 +01:00
Maxim Cournoyer aef5055ff9
gnu: udisks: Add manpages.
* gnu/packages/freedesktop.scm (udisks)[native-inputs]: Add docbook-xml
and docbook-xsl.
[arguments]: Add #:make-flags to specify XML catalog files for manuals.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-27 11:10:31 +01:00
Ricardo Wurmus dbf8f84f15
gnu: gcj: Fix build on armhf.
* gnu/packages/patches/gcj-arm-mode.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.
* gnu/packages/gcc.scm (gcj): Add patch.
[arguments]: Delete failing tests.
2016-11-27 10:04:57 +01:00
Ricardo Wurmus 253cdd6c14
gnu: Add biber-2.5.
* gnu/packages/tex.scm (biber-2.5): New variable.
2016-11-27 09:48:43 +01:00
Ricardo Wurmus d400068085
gnu: Add biber.
* gnu/packages/tex.scm (biber): New variable.
2016-11-27 09:48:43 +01:00
Ricardo Wurmus ebcf74daf8
gnu: Add perl-text-bibtex.
* gnu/packages/tex.scm (perl-text-bibtex): New variable.
2016-11-27 09:48:43 +01:00
Ricardo Wurmus 93863a5e72
gnu: Add perl-xml-libxslt.
* gnu/packages/xml.scm (perl-xml-libxslt): New variable.
2016-11-27 09:48:43 +01:00
Ricardo Wurmus df669244f9
gnu: perl-unicode-linebreak: Update to 2016.003.
* gnu/packages/perl.scm (perl-unicode-linebreak): Update to 2016.003.
2016-11-27 09:48:43 +01:00
Ricardo Wurmus 5d2ecbffb2
gnu: Add perl-unicode-collate.
* gnu/packages/perl.scm (perl-unicode-collate): New variable.
2016-11-27 09:48:43 +01:00
Ricardo Wurmus 37e7a4929f
gnu: Add perl-unicode-normalize.
* gnu/packages/perl.scm (perl-unicode-normalize): New variable.
2016-11-27 09:48:42 +01:00
Ricardo Wurmus dc32ee5381
gnu: Add perl-text-roman.
* gnu/packages/perl.scm (perl-text-roman): New variable.
2016-11-27 09:48:42 +01:00
Ricardo Wurmus 44c31aaae8
gnu: Add perl-text-csv-xs.
* gnu/packages/perl.scm (perl-text-csv-xs): New variable.
2016-11-27 09:48:42 +01:00
Ricardo Wurmus 0ef5191c88
gnu: Add perl-sort-key.
* gnu/packages/perl.scm (perl-sort-key): New variable.
2016-11-27 09:48:42 +01:00
Ricardo Wurmus 3521dc9293
gnu: Add perl-mozilla-ca.
* gnu/packages/perl.scm (perl-mozilla-ca): New variable.
2016-11-27 09:48:42 +01:00
Ricardo Wurmus 37115dc650
gnu: Add perl-lingua-translit.
* gnu/packages/perl.scm (perl-lingua-translit): New variable.
2016-11-27 09:48:41 +01:00
Ricardo Wurmus e9ef394ac9
gnu: Add perl-ipc-cmd.
* gnu/packages/perl.scm (perl-ipc-cmd): New variable.
2016-11-27 09:48:41 +01:00
Ricardo Wurmus 81157cf5a7
gnu: Add perl-extutils-libbuilder.
* gnu/packages/perl.scm (perl-extutils-libbuilder): New variable.
2016-11-27 09:48:41 +01:00
Ricardo Wurmus 0185442003
gnu: Add perl-encode-hanextra.
* gnu/packages/perl.scm (perl-encode-hanextra): New variable.
2016-11-27 09:48:41 +01:00
Ricardo Wurmus 2bc1b85ce6
gnu: Add perl-encode-jis2k.
* gnu/packages/perl.scm (perl-encode-jis2k): New variable.
2016-11-27 09:48:41 +01:00
Ricardo Wurmus 891d9679a2
gnu: Add perl-encode-eucjpascii.
* gnu/packages/perl.scm (perl-encode-eucjpascii): New variable.
2016-11-27 09:48:41 +01:00
Ricardo Wurmus 49a3fcc13c
gnu: perl-encode-detect: Move to alphabetical position.
* gnu/packages/perl.scm (perl-encode-detect): Move variable definition.
2016-11-27 09:48:40 +01:00
Ricardo Wurmus 7a146c2528
gnu: Add perl-datetime-calendar-julian.
* gnu/packages/perl.scm (perl-datetime-calendar-julian): New variable.
2016-11-27 09:48:40 +01:00
Ricardo Wurmus 36dd594316
gnu: Add perl-date-simple.
* gnu/packages/perl.scm (perl-date-simple): New variable.
2016-11-27 09:48:40 +01:00
Ricardo Wurmus cc3dafbb02
gnu: Add perl-data-uniqid.
* gnu/packages/perl.scm (perl-data-uniqid): New variable.
2016-11-27 09:48:40 +01:00
Ricardo Wurmus 9413e95f59
gnu: Add perl-data-compare.
* gnu/packages/perl.scm (perl-data-compare): New variable.
2016-11-27 09:48:40 +01:00
Ricardo Wurmus adbf4b944c
gnu: Add perl-business-ismn.
* gnu/packages/perl.scm (perl-business-ismn): New variable.
2016-11-27 09:48:40 +01:00
Ricardo Wurmus 296663839b
gnu: Add perl-tie-cycle.
* gnu/packages/perl.scm (perl-tie-cycle): New variable.
2016-11-27 09:48:39 +01:00
Ricardo Wurmus e0b6accf19
gnu: Add perl-business-issn.
* gnu/packages/perl.scm (perl-business-issn): New variable.
2016-11-27 09:48:39 +01:00
Ricardo Wurmus 72f8646ef5
gnu: Add perl-business-isbn.
* gnu/packages/perl.scm (perl-business-isbn): New variable.
2016-11-27 09:48:39 +01:00
Ricardo Wurmus a3f5beb7a2
gnu: Add perl-business-isbn-data.
* gnu/packages/perl.scm (perl-business-isbn-data): New variable.
2016-11-27 09:48:39 +01:00
Ricardo Wurmus 3f1df54cc0
gnu: Add perl-autovivification.
* gnu/packages/perl.scm (perl-autovivification): New variable.
2016-11-27 09:48:39 +01:00
Ricardo Wurmus d4ba9a5f21
gnu: Add perl-mojolicious.
* gnu/packages/perl-web.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-11-27 09:48:39 +01:00
Ricardo Wurmus 45591fd7fd
gnu: Add threaded variants of fftw and fftwf for Ardour and mod-host.
* gnu/packages/algebra.scm (fftw-with-threads, fftwf-with-threads): New
variables.
* gnu/packages/audio.scm (ardour)[inputs]: Replace "fftw" and "fftwf"
with "fftw-with-threads" and "fftwf-with-threads", respectively.
* gnu/packages/music.scm (mod-host)[inputs]: Likewise.
2016-11-27 09:48:16 +01:00
宋文武 a82f0b3617
tests: Add 'opensmtpd-service-type' test.
* gnu/tests/mail.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-11-27 10:15:43 +08:00
Leo Famulari b46cefc954
gnu: libsodium: Update to 1.0.11.
* gnu/packages/crypto.scm (libsodium): Update to 1.0.11.
2016-11-26 20:48:34 -05:00
Tobias Geerinckx-Rice d32f4800d6
gnu: libgphoto2: Add XML support.
* gnu/packages/photo.scm (libgphoto2)[inputs]: Add libxml2.
2016-11-27 01:43:40 +01:00
Tobias Geerinckx-Rice 9dcc9bbf3b
gnu: gphoto2: Update to 2.5.10.
* gnu/packages/photo.scm (gphoto2): Update to 2.5.10.
2016-11-27 01:43:40 +01:00
Tobias Geerinckx-Rice 35c0ad4448
gnu: libgphoto2: Update to 2.5.10.
* gnu/packages/photo.scm (libgphoto2): Update to 2.5.10.
2016-11-27 01:43:39 +01:00
Toni Reina c3e2a2471c
gnu: Add Mozilla Fira Mono font.
* gnu/packages/fonts.scm (font-fira-mono): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-26 23:21:37 +01:00
Leo Famulari cd65d600ac
gnu: cyrus-sasl: Fix CVE-2013-4122.
* gnu/packages/patches/cyrus-sasl-CVE-2013-4122.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cyrus-sasl.scm (cyrus-sasl)[replacement]: New field.
(cyrus-sasl/fixed): New variable.
[source]: Use patch.
2016-11-26 16:21:02 -05:00
Efraim Flashner 439a2f62ce
gnu: ffmpeg: Update to 3.2.1.
* gnu/packages/video.scm (ffmpeg): Update to 3.2.1.
2016-11-26 22:53:13 +02:00
Leo Famulari 9e46245b89
gnu: gst-plugins-good: Fix CVE-2016-{9634,9635,9636} and other security issues.
* gnu/packages/patches/gst-plugins-good-fix-crashes.patch,
gnu/packages/patches/gst-plugins-good-fix-invalid-read.patch,
gnu/packages/patches/gst-plugins-good-fix-signedness.patch,
gnu/packages/patches/gst-plugins-good-flic-bounds-check.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gstreamer.scm (gst-plugins-good): Use them.
2016-11-26 14:27:24 -05:00
Julien Lepiller 5305ed2002
services: Factorize configuration abstraction.
* gnu/services/mail.scm and gnu/services/cups.scm (&configuration-error)
(configuration-error, configuration-field-error)
(configuration-missing-field, configuration-field, serialize-configuration)
(validate-configuration, define-configuration, uglify-field-name)
(serialize-field, serialize-package, serialize-string)
(serialize-space-separated-string-list, space-separated-string-list?)
(serialize-file-name, file-name?, serialize-field-name)
(generate-documentation): Move duplicate code...
* gnu/services/configuration.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add configuration.scm.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-26 19:46:01 +01:00
Leo Famulari cf3678df6e
gnu: psyclpc: Update comment.
This is a followup to commit eaa45301f4.

* gnu/packages/messaging.scm (psyclpc): Update comment.
2016-11-26 13:36:51 -05:00
ng0 ebfc2ecc3c
gnu: Move content of (gnu packages psyc) into (gnu packages messaging).
* gnu/packages/psyc.scm (perl-net-psyc, libpsyc, psyclpc): Move this ...
* gnu/packages/messaging.scm (perl-net-psyc, libpsyc, psyclpc): ... here.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove psyc.scm.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-26 13:23:46 -05:00
ng0 eaa45301f4
gnu: psyclpc: Upgrade to 20160821-2.61cf9aa.
This makes the package reproducible.

* gnu/packages/psyc.scm (psyclpc): Upgrade to 20160821-2.61cf9aa.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-26 13:23:46 -05:00
Danny Milosavljevic c6c80104ab
gnu: python-flask: Update to 0.11.1.
* gnu/packages/python.scm (python-flask): Update to 0.11.1.
[native-inputs]: Add python-click.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-26 16:35:07 +01:00
Danny Milosavljevic 61684de287
gnu: python-pyopenssl: Update to 16.2.0.
* gnu/packages/python.scm (python-pyopenssl): Update to 16.2.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-26 16:35:07 +01:00
Danny Milosavljevic b2e6e150aa
gnu: python-simplejson: Update to 3.10.0.
* gnu/packages/python.scm (python-simplejson): Update to 3.10.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-26 16:35:07 +01:00
ng0 faa29e4bdb
gnu: Add mumble.
* gnu/packages/telephony.scm (mumble): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-26 12:32:22 +01:00
Marius Bakke 4f55441fe3
gnu: transmission: Update to 2.92.
* gnu/packages/bittorrent.scm (transmission): Update to 2.92.
[inputs]: Add cyrus-sasl.
2016-11-26 12:32:01 +01:00
Ben Woodcroft 5e0a0f4226
gnu: roary: Update to 3.7.0.
* gnu/packages/bioinformatics.scm (roary): Update to 3.7.0.
2016-11-26 20:15:39 +10:00
Ben Woodcroft 31a9d653ad
gnu: Add proteinortho.
* gnu/packages/bioinformatics.scm (proteinortho): New variable.
2016-11-26 20:15:37 +10:00
Julien Lepiller d3eff97afd
gnu: Add python-polib.
* gnu/packages/python.scm (python-polib, python2-polib): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-26 10:29:29 +01:00
John Darrington fc5dc4e81c
gnu: Whitespace changes
* gnu/services/kerberos.scm: Fold lines to 80 character limit.
2016-11-26 07:37:33 +01:00
Leo Famulari 53d892dd92
gnu: imagemagick: Update to 6.9.6-6 [fixes CVE-2016-9556].
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.6-6.
2016-11-26 00:38:45 -05:00
宋文武 f88371e866
services: Add opensmtpd service.
* gnu/services/mail.scm (<opensmtpd-configuration>): New record type.
(%default-opensmtpd-config-file, %opensmtpd-accounts): New variables.
(opensmtpd-shepherd-service, opensmtpd-activation): New procedures.
(opensmtpd-service-type): New variable.
* doc/guix.texi (Mail Services): Document it.
2016-11-26 12:50:11 +08:00
Leo Famulari 0959478c72
gnu: Add missing module import to (gnu packages ldc).
This is a followup to commit e44b511298.

* gnu/packages/ldc.scm: Import (gnu packages python).
2016-11-25 23:18:29 -05:00
Danny Milosavljevic e44b511298
gnu: ldc: Update to 0.17.2.
* gnu/packages/ldc.scm (ldc): Update to 0.17.2.
* gnu/packages/patches/ldc-disable-tests.patch: Fix timezone file name.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-25 23:54:51 +01:00
Ludovic Courtès 6634180f9e
gnu: guile-ssh: Update to 0.10.2.
* gnu/packages/ssh.scm (guile-ssh): Update to 0.10.2.
[home-page]: Update.
[source]: Use the 'url-fetch' method and a GitHub generated
tarball.
[arguments] <autoreconf>: Remove now unneeded 'chmod' call.
2016-11-25 23:44:20 +01:00
Ricardo Wurmus 7276b5604d
gnu: hydrogen: Update to 0.9.7.
* gnu/packages/music.scm (hydrogen): Update to 0.9.7.
2016-11-25 21:44:16 +01:00
Leo Famulari c415f76302
gnu: python-betamax: Fix typo.
* gnu/packages/python.scm (python-betamax): Fix typo.
2016-11-25 11:31:43 -05:00
Leo Famulari de32aa74b4
Merge branch 'master' into python-build-system 2016-11-25 11:20:21 -05:00
Tobias Geerinckx-Rice d66cbd1adc
gnu: btrfs-progs: Update to 4.8.4.
* gnu/packages/linux.scm (btrfs-progs): Update to 4.8.4.
2016-11-25 17:00:51 +01:00
Tobias Geerinckx-Rice fc89cb691d
gnu: lz4: Update to 1.7.4.2.
* gnu/packages/compression.scm (lz4): Update to 1.7.4.2.
2016-11-25 16:31:20 +01:00
Tobias Geerinckx-Rice dead1067c3
gnu: hplip: Update to 3.16.11.
* gnu/packages/cups.scm (hplip): Update to 3.16.11.
2016-11-25 16:31:10 +01:00
Ricardo Wurmus aaaf8b3844
gnu: qtractor: Update to 0.8.0.
* gnu/packages/music.scm (qtractor): Update to 0.8.0.
2016-11-25 13:08:06 +01:00
Alex Kost 1e34721435
gnu: qemu: Install all required info files.
* gnu/packages/qemu.scm (qemu)[arguments]: Adjust 'install-info' phase
to find all info files (including "*.info-N").
2016-11-25 16:09:22 +03:00
Theodoros Foradis 8f528bd442
gnu: Add kicad-library.
* gnu/packages/engineering.scm (kicad-library): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-25 00:38:11 -05:00
Theodoros Foradis befc9ff643
gnu: Add kicad.
* gnu/packages/engineering.scm (kicad): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-25 00:38:11 -05:00
Theodoros Foradis b353c7d201
gnu: Add python2-wxpython.
* gnu/packages/wxwidgets.scm (python2-wxpython): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-25 00:38:10 -05:00
Theodoros Foradis 2cd3b6fd03
gnu: Add wxwidgets-gtk2.
* gnu/packages/wxwidgets.scm (wxwidgets-gtk2): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-25 00:38:10 -05:00
Leo Famulari 88d45b74c1
gnu: nginx: Update to 1.11.6.
* gnu/packages/web.scm (nginx): Update to 1.11.6.
[arguments]: Remove the obsolete option --with-ipv6 from #:configure-flags.
2016-11-25 00:07:40 -05:00
Tobias Geerinckx-Rice e0f8a520ed
gnu: miniupnpc: Improve synopsis and description.
* gnu/packages/upnp.scm (miniupnp)[synopsis, description]: Edit, fix typos,
add some relevant (search) terms from the home page, and expand acronyms.
2016-11-25 02:21:51 +01:00
Tobias Geerinckx-Rice 5af82630fe
gnu: miniupnpc: Use the correct ‘upnpc’ in ‘external-ip’.
* gnu/packages/upnp.scm (miniupnpc)[arguments]: Add ‘qualify-paths’ phase.
2016-11-25 02:21:51 +01:00
Tobias Geerinckx-Rice cdbdaf7b6b
gnu: miniupnpc: Use ‘modify-phases’ syntax.
* gnu/packages/upnp.scm (miniupnpc)[arguments]: Use ‘modify-phases’.
2016-11-25 02:21:50 +01:00
Tobias Geerinckx-Rice 2d3b0203f4
gnu: miniupnpc: Update to 2.0.
* gnu/packages/upnp.scm (miniupnpc): Update to 2.0.
2016-11-25 02:21:50 +01:00
Tobias Geerinckx-Rice ade5848576
gnu: vim: Update to 8.0.0101.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0101.
2016-11-25 02:21:49 +01:00
Ludovic Courtès 13fb1bd94e
doc: Document encrypted root partitions.
This is a followup to f7f292d359.

* doc/guix.texi (Preparing for Installation): Give commands for
encrypted root installation.
(Proceeding with the Installation): Add item about mapped devices.
(File Systems): Mention that 'dependencies' can list <mapped-device>
objects.
* gnu/system/examples/desktop.tmpl (mapped-devices): New field.
(file-systems): Add 'dependencies' field.
2016-11-24 23:20:41 +01:00
Ludovic Courtès 030f59fac9
services: network-manager: Depend on 'wpa-supplicant'.
Suggested by Chris Marusich <cmmarusich@gmail.com>.

* gnu/services/networking.scm (network-manager-shepherd-service)
[requirement]: Add 'wpa-supplicant'.
2016-11-24 21:43:48 +01:00
Ludovic Courtès 89007a0bb7
services: network-manager: Install polkit actions.
Reported by Chris Marusich <cmmarusich@gmail.com>
at <https://lists.gnu.org/archive/html/help-guix/2016-11/msg00038.html>.

* gnu/services/networking.scm (network-manager-service-type)[extensions]:
Add POLKIT-SERVICE-TYPE.
2016-11-24 21:43:47 +01:00
Ludovic Courtès 2e32869824
services: Move polkit to (gnu services dbus).
* gnu/services/desktop.scm (<polkit-configuration>, %polkit-accounts)
(%polkit-pam-services, polkit-directory, polkit-etc-files)
(polkit-setuid-programs, polkit-service-type, polkit-service): Move
to...
* gnu/services/dbus.scm: ... here.
2016-11-24 21:43:47 +01:00
Ludovic Courtès 62126576fc
gnu: hdf5: Build the C++ interface.
* gnu/packages/maths.scm (hdf5)[arguments]: Add #:configure-flags.
2016-11-24 21:43:47 +01:00
Tobias Geerinckx-Rice 6f09c100d9
gnu: vim: Update to 8.0.0096.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0096.
2016-11-24 16:57:22 +01:00
Tobias Geerinckx-Rice c50f2af9f8
gnu: ir: Use archived tarball and home page.
* gnu/packages/audio.scm (ir)[source]: Use a list of archive mirrors.
[home-page]: Link to an Internet Archive snapshot.
2016-11-24 06:34:37 +01:00
Tobias Geerinckx-Rice 2df984f278
gnu: ir: Use ‘modify-phases’ syntax.
* gnu/packages/audio.scm (ir)[arguments]: Use ‘modify-phases’.
2016-11-24 06:34:37 +01:00
Leo Famulari 0bd1097c50
gnu: libtiff: Update to 4.0.7.
* gnu/packages/image.scm (libtiff): Update to 4.0.7.
[source]: Update URL and remove obsolete patches.
[home-page]: Update URL.
[native-inputs]: Add gcc-5.
(libtiff-4.0.7): Delete variable.
* gnu/packages/patches/libtiff-CVE-2015-8665+CVE-2015-8683.patch,
gnu/packages/patches/libtiff-CVE-2016-3623.patch,
gnu/packages/patches/libtiff-CVE-2016-3945.patch,
gnu/packages/patches/libtiff-CVE-2016-3990.patch,
gnu/packages/patches/libtiff-CVE-2016-3991.patch,
gnu/packages/patches/libtiff-CVE-2016-5314.patch,
gnu/packages/patches/libtiff-CVE-2016-5321.patch,
gnu/packages/patches/libtiff-CVE-2016-5323.patch,
gnu/packages/patches/libtiff-oob-accesses-in-decode.patch,
gnu/packages/patches/libtiff-oob-write-in-nextdecode.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2016-11-23 22:53:43 -05:00
Leo Famulari 2ac7d54616
Merge branch 'master' into staging 2016-11-23 22:24:52 -05:00
Ludovic Courtès cc73339b97
tests: Remove 'GUIX_LOCPATH' hack that had been added for glibc@2.23.
* gnu/tests/base.scm (run-basic-test)[test]("locale"): Remove
'GUIX_LOCPATH' hack, which is no longer needed since
commit 9f58fe3d1c.
2016-11-23 21:13:18 +01:00
Ludovic Courtès f7f292d359
install: Enable "cryptodisk" handling in GRUB.
This allows 'grub-install' to do the right thing when / or /boot is a
LUKS-encrypted partition.

Fixes <http://bugs.gnu.org/21843>.

* gnu/build/install.scm (install-grub): Add 'setenv' to set
'GRUB_ENABLE_CRYPTODISK'.
(wait-for-screen-text): New test.
* gnu/tests/base.scm (run-basic-test): Add #:initialization parameter
and honor it.
* gnu/tests/install.scm (%encrypted-root-os)[kernel-arguments]: Remove.
(%encrypted-root-installation-script): Pass '--uuid' to 'cryptsetup
luksFormat'.  Remove 'sed' invocation.
(enter-luks-passphrase): New procedure.
(%test-encrypted-os)[value]: Pass #:initialization to 'run-basic-test'.
2016-11-23 21:13:18 +01:00
Ludovic Courtès b7d408ec1b
mapped-devices: Use 'cryptsetup-static' in 'luks-device-mapping'.
* gnu/system/mapped-devices.scm (open-luks-device): Use
CRYPTSETUP-STATIC instead of CRYPTSETUP.  Use 'file-append'.
(close-luks-device): Likewise.
2016-11-23 21:13:18 +01:00
Ludovic Courtès fe93383350
marionette: Add 'marionette-screen-text' using OCR.
* gnu/build/marionette.scm (marionette-screen-text): New procedure.
* gnu/tests/base.scm (run-basic-test)["screen text"]: New test.
2016-11-23 21:13:18 +01:00
Ludovic Courtès f25c9ebc80
marionette: Delay synchronization with the host's REPL.
* gnu/build/marionette.scm (<marionette>)[marionette-repl]: Rename to...
[%marionette-repl]: ... this.
(marionette-repl): New macro.
(make-marionette): Wrap last 'read' call into 'delay', making the last
argument to 'marionette' a promise of a port.
(marionette-eval): Use 'force' in 'match' clause.
2016-11-23 21:13:18 +01:00
Leo Famulari 1c9f78eca1
gnu: python-passlib: Update to 1.7.0.
* gnu/packages/python.scm (python-passlib, python2-passlib): Update to 1.7.0.
2016-11-23 14:38:05 -05:00
Efraim Flashner 262c2d33bc
gnu: perl-digest-md5: Fix typo.
* gnu/packages/perl.scm (perl-digest-md5)[arguments]: Remove extra ')'.
2016-11-23 18:16:53 +02:00
ng0 8a28e717ba
gnu: Add perl-digest-md5.
* gnu/packages/perl.scm (perl-digest-md5): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-23 16:46:47 +01:00
Efraim Flashner bc05caee77
gnu: chez.scm: Add '#:use-module srfi srfi-1'.
This is a follow-up to 1e16648f82.

* gnu/packages/chez.scm: Add '#:use-module srfi srfi-1'.
2016-11-23 12:42:36 +02:00
Efraim Flashner 8553fe5734
gnu: Add aspell-dict-he.
* gnu/packages/aspell.scm (aspell-dict-he): New variable.
2016-11-23 12:38:28 +02:00
Efraim Flashner 1e16648f82
gnu: chez-scheme: Remove support for armhf.
* gnu/packages/chez.scm (chez-scheme)[supported-systems]: Remove
armhf-linux from the list of supported systems.
2016-11-23 12:37:17 +02:00
Mark H Weaver 08b3e4a970
gnu: linux-libre: Update to 4.8.10.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.10.
2016-11-22 21:59:54 -05:00
Mark H Weaver 4263eb4dd0
gnu: linux-libre@4.4: Update to 4.4.34.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.34.
2016-11-22 21:49:39 -05:00
Ludovic Courtès 66ebb5bca3
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 1f410017.
2016-11-23 00:03:18 +01:00
Ludovic Courtès 35b2f18c5f
Revert "gnu: Update mit-krb5 to version 1.14.4."
This reverts commit 2947ff6430, which
would have caused too many rebuilds for 'master'.
2016-11-23 00:03:17 +01:00
Ludovic Courtès ad17470551
marionette: Avoid use of SIGALRM for timeouts.
* gnu/build/marionette.scm (make-marionette)[accept*]: New procedures.
Remove calls to 'sigaction'.  Use 'accept*' instead of 'accept'.
2016-11-22 23:45:08 +01:00
Ludovic Courtès 106b389e52
gnu: Add 'cryptsetup-static'.
* gnu/packages/cryptsetup.scm (static-library): New procedure.
(cryptsetup-static): New variable.
2016-11-22 23:45:01 +01:00
Ludovic Courtès 01f94cca19
gnu: Add 'lvm2-static'.
* gnu/packages/patches/lvm2-static-link.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (lvm2)[source](patches): New field.
(lvm2-static): New variable.
2016-11-22 22:59:31 +01:00
Ludovic Courtès 10da75dff8
gnu: grub: Add dependency on LVM2.
* gnu/packages/grub.scm (grub)[inputs]: Add LVM2.
2016-11-22 22:59:31 +01:00
Christopher Allan Webber 8957af324b
gnu: python-pyld: Update to 0.7.1.
* gnu/packages/python.scm (python-pyld): Update to 0.7.1.
2016-11-22 15:29:33 -06:00
Marius Bakke 61320932ed
gnu: harfbuzz: Update to 1.3.3.
* gnu/packages/gtk.scm (harfbuzz): Update to 1.3.3.
[home-page]: Use HTTPS.
2016-11-22 21:46:59 +01:00
John Darrington 2947ff6430
gnu: Update mit-krb5 to version 1.14.4.
* gnu/packages/mit-krb5.scm (mit-krb5): Update to 1.14.4
2016-11-22 21:27:19 +01:00
Marius Bakke 1f410017ff
gnu: notmuch: Update to 0.23.2.
* gnu/packages/mail.scm (notmuch): Update to 0.23.2.
2016-11-22 20:44:53 +01:00
Marius Bakke 6317d36f3b
gnu: notmuch: Skip tests that fail with gnupg-2.1.16.
* gnu/packages/mail.scm (notmuch)[arguments]: Add environment variable
to skip tests that broke after gnupg-2.1.16.
2016-11-22 20:44:48 +01:00
Leo Famulari be72eb98fa
gnu: libtiff: Update replacement to 4.0.7.
* gnu/packages/image.scm (libtiff)[replacement]: Update to 4.0.7.
(libtiff-4.0.7): New variable. Update home-page and source URLs.
(libtiff/fixed): Delete variable.
* gnu/packages/patches/libtiff-CVE-2016-5652.patch,
gnu/packages/patches/libtiff-CVE-2016-9273.patch,
gnu/packages/patches/libtiff-CVE-2016-9297.patch,
gnu/packages/patches/libtiff-CVE-2016-9448.patch,
gnu/packages/patches/libtiff-uint32-overflow.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2016-11-22 12:30:36 -05:00
Marius Bakke d8e3bb082d
gnu: vim: Update to 8.0.0095.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0095.
2016-11-22 17:33:07 +01:00
Kei Kebreau c3cc7d412a
gnu: Add espeak.
* gnu/packages/audio.scm (espeak): New variable.
2016-11-22 11:24:41 -05:00
Eric Bavier 52db41aff8
gnu: system: Add openfwwf-firmware to %base-firmware.
* gnu/system.scm (%base-firmware): Add openfwwf-firmware.
* doc/guix.texi (Hardware Considerations): Mention b43-open support.
(operating-system Reference)[firmware]: Likewise.
2016-11-22 09:38:36 -06:00
Eric Bavier e36a67c91a
gnu: Add openfwwf-firmware.
* gnu/packages/firmware.scm (b43-tools, openfwwf-firmware): New
variables.
2016-11-22 09:38:36 -06:00
Efraim Flashner 4a5ec78d5f
gnu: w3m: Update to 0.5.3+git20161120 [fixes security issues].
Fixes CVE-2016-9439 and others.

* gnu/packages/w3m.scm (w3m): Update to 0.5.3+git20161120.
2016-11-22 14:00:11 +02:00
Efraim Flashner 83a3e805be
gnu: w3m: Use 'modify-phases' syntax.
* gnu/packages/w3m.scm (w3m)[arguments]: Use 'modify-phases' syntax.
2016-11-22 14:00:11 +02:00
Ben Woodcroft ee7518a009
gnu: ruby: Update replacement to 2.3.3.
* gnu/packages/ruby.scm (ruby)[replacement]: Update to 2.3.3.
(ruby-2.3.2): Replace this ...
(ruby-2.3.3): ... with this.
2016-11-22 21:39:18 +10:00
Ben Woodcroft f4a8081d24
gnu: ruby: Update to 2.3.3.
* gnu/packages/ruby.scm (ruby): Update to 2.3.3.
2016-11-22 21:35:58 +10:00
Ben Woodcroft 8e5f8c98e2
gnu: diamond: Update to 0.8.27.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.27.
2016-11-22 21:01:21 +10:00
Ricardo Wurmus 1ea7969fa6
gnu: zynaddsubfx: Update to 3.0.0.
* gnu/packages/music.scm (zynaddsubfx): Update to 3.0.0.
[inputs]: Add "mesa".
2016-11-22 09:47:16 +01:00
Efraim Flashner dd3f8fe660
gnu: connman: Update to 1.33.
* gnu/packages/connman.scm (connman): Update to 1.33.
2016-11-21 23:52:19 +02:00
Petter daf72603eb
gnu: Remove redundancy where mkdir-p <dir> is followed by install-file <file> <dir>.
* gnu/packages/bioinformatics.scm (bwa)[arguments]: Remove redundant mkdir-p.
(eigensoft)[arguments]: Likewise.
(snap-aligner)[arguments]: Likewise.
(pardre)[arguments]: Likewise.
(piranha)[arguments]: Likewise.
* gnu/packages/maths.scm (hypre)[arguments]: Likewise.
* gnu/packages/mp3.scm (mpc123)[arguments]: Likewise.
* gnu/packages/music.scm (tuxguitar)[arguments]: Likewise.
* gnu/packages/pdf.scm (impressive)[arguments]: Likewise.
* gnu/packages/qemu.scm (qemu)[arguments]: Likewise.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-21 14:39:54 -05:00
Alex Kost 7c90d0f40e
gnu: packages: Use gettext-minimal.
* gnu/packages/crypto.scm (tomb): Use 'gettext-minimal' instead of
'gnu-gettext'.
* gnu/packages/emacs.scm (m17n-db): Likewise.
* gnu/packages/ftp.scm (weex): Likewise.
* gnu/packages/games.scm (chromium-bsu): Likewise.
* gnu/packages/image.scm (steghide): Likewise.
* gnu/packages/linux.scm (radeontop): Likewise.
* gnu/packages/mpd.scm (sonata): Likewise.
* gnu/packages/networking.scm (whois): Likewise.
* gnu/packages/package-management.scm (guix-0.11.0): Likewise.
* gnu/packages/psyc.scm (psyclpc): Likewise.
* gnu/packages/syndication.scm (newsbeuter): Likewise.
* gnu/packages/vim.scm (vim-full): Likewise.
2016-11-21 19:47:30 +03:00
Hartmut Goebel 856f30b000
gnu: shared-mime-info: Update to 1.7
* gnu/packages/gnome.scm (shared-mime-info): Update to 1.7.
2016-11-21 17:17:11 +01:00
Leo Famulari dc6d1b9609
gnu: libtiff: Fix URL in 'libtiff-uint32-overflow.patch'.
* gnu/packages/patches/libtiff-uint32-overflow.patch: Fix URL.
2016-11-21 11:16:37 -05:00
Leo Famulari 6305b81fed
gnu: swig: Update to 3.0.10.
* gnu/packages/swig.scm (swig): Update to 3.0.10.
2016-11-21 11:10:06 -05:00
Ludovic Courtès c9eae83ffa
gnu: dico: Update to 2.4.
* gnu/packages/dico.scm (dico): Update to 2.4.
[source]: Remove 'snippet'.
2016-11-21 15:25:38 +01:00
Ludovic Courtès b3131e2318
services: static-networking: Remove unused parameter.
This is a followup to e48fcd7b8d.

* gnu/services/networking.scm (static-networking-service): Remove #:net-tools.
(static-networking-service-type): Remove outdated comment.
2016-11-21 15:25:38 +01:00
ng0 e01e2c6c52
gnu: services: Add git-service.
* gnu/services/version-control.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Misellaneous Services)[Version Control]: New section.

Co-authored-by: 宋文武 <iyzsong@member.fsf.org>
2016-11-21 20:37:43 +08:00
Ricardo Wurmus 2316078a4e
gnu: Add emacs-emms-mode-line-cycle.
* gnu/packages/emacs.scm (emacs-emms-mode-line-cycle): New variable.
2016-11-21 11:52:26 +01:00
Efraim Flashner 83b294b6d6
gnu: opusfile: Update to 0.8.
* gnu/packages/xiph.scm (opusfile): Update to 0.8.
2016-11-21 10:49:45 +02:00
Efraim Flashner b1e25b08f2
gnu: obs: Update to 0.16.6.
* gnu/packages/video.scm (obs): Update to 0.16.6.
2016-11-21 07:14:05 +02:00
Efraim Flashner 89a30625b9
gnu: mpv: Update to 0.22.0.
* gnu/packages/video.scm (mpv): Update to 0.22.0.
2016-11-21 06:57:16 +02:00
Efraim Flashner 7ceee88c43
gnu: chez-scheme: Properly identify system architecture.
* gnu/packages/chez.dcm (chez-scheme)[arguments]: Substitute `uname -m'
for `uname -a' in configure, allowing proper identification of the
machine architecture.
2016-11-21 06:57:16 +02:00
Ludovic Courtès e48fcd7b8d
services: static-networking: Avoid use of net-tools.
* gnu/services/networking.scm (<static-networking>)[net-tools]: Remove.
(static-networking-service-type): Use 'add-network-route/gateway' and
'delete-network-route' instead of NET-TOOLS.
(static-networking-service): Adjust accordingly.
2016-11-21 00:34:49 +01:00
Julien Lepiller 1845c2a436
gnu: Add php.
* gnu/packages/php.scm: New file.
* gnu/packages/patches/gd-fix-chunk-size-on-boundaries.patch: New file.
* gnu/packages/patches/gd-fix-truecolor-format-correction.patch: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add php.
(dist_patch_DATA): Add gd patches.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2016-11-20 17:54:14 +01:00
Marius Bakke b28a33512f
gnu: Add sqlite-3.15.1.
* gnu/packages/databases.scm (sqlite-3.15.1): New variable.
2016-11-20 17:46:32 +01:00
Nicolas Goaziou 43ffe220c8
gnu: lilypond: Update to 2.19.51.
* gnu/packages/music.scm (lilypond): Update to 2.19.51.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-20 17:46:21 +01:00
Leo Famulari 25291aca74
gnu: python-icalendar: Update to 3.11.
* gnu/packages/python.scm (python-icalendar): Update to 3.11.
2016-11-20 11:22:27 -05:00
Ben J Woodcroft 66b1bac355
gnu: ruby: Update to 2.3.2.
* gnu/packages/ruby.scm (ruby): Update to 2.3.2.
[replacement]: Remove field.
[origin]: Remove patch.
* gnu/packages/patches/ruby-symlinkfix.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-11-20 15:50:10 +10:00
Leo Famulari 764c566221
gnu: gnupg: Update to 2.1.16.
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.16.
[arguments]: Remove obsolete substitution from 'patch-paths' phase.
Remove 'set-home' phase. Add 'set-gnupg-home' phase.
2016-11-19 23:43:32 -05:00
宋文武 9fff9e6484
gnu: gtk-engines: Don't propagate GTK+.
* gnu/packages/gtk.scm (gtk-engines): Move gtk+ to 'inputs'.
2016-11-20 12:02:04 +08:00
Mark H Weaver 5a1ef07d3e
gnu: linux-libre: Update to 4.8.9.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.9.
2016-11-19 22:29:38 -05:00
Mark H Weaver 13172f0d79
gnu: linux-libre@4.4: Update to 4.4.33.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.33.
2016-11-19 22:28:07 -05:00
Ben Woodcroft 9b62c5a8fb
gnu: ruby: Replace with ruby-2.3.2 [fixes CVE-2015-3900].
* gnu/packages/ruby.scm (ruby)[replacement]: New field.
(ruby-2.3.2): New variable.
2016-11-20 11:38:12 +10:00
Ludovic Courtès 966a543b36
gnu: Use 'mirror://' URLs in several places.
* gnu/packages/emacs.scm (m17n-lib)[source]: Use 'mirror://'.
* gnu/packages/games.scm (extremetuxracer)[source]: Likewise.
* gnu/packages/gcc.scm (%gcc-infrastructure): Likewise.
* gnu/packages/gtk.scm (python2-pygtk)[source]: Likewise.
* gnu/packages/perl.scm (perl)[source]: Likewise.
* gnu/packages/telephony.scm (exosip)[source]: Likewise.
* gnu/packages/wm.scm (xmonad)[source]: Likewise.
(ghc-xmonad-contrib)[source]: Likewise.
2016-11-19 18:44:54 +01:00
Ludovic Courtès 6129dd8b59
vm: Disable initrd-time QEMU networking for VM images.
Fixes <http://bugs.gnu.org/24943>.
Reported by dian_cecht@zoho.com.

* gnu/system/vm.scm (system-qemu-image)[initrd]: Remove
 #:qemu-networking? #t.
(virtualized-operating-system): Likewise
2016-11-19 18:44:54 +01:00
Ricardo Wurmus 18675264c6
gnu: Add samplv1.
* gnu/packages/music.scm (samplv1): New variable.
2016-11-19 17:54:50 +01:00
Ricardo Wurmus cf9af706fb
gnu: Add drumkv1.
* gnu/packages/music.scm (drumkv1): New variable.
2016-11-19 17:54:50 +01:00
Leo Famulari 2fedcd1895
gnu: libtiff: Fix CVE-2016-9448.
* gnu/packages/patches/libtiff-CVE-2016-9448.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
2016-11-19 11:31:00 -05:00
Leo Famulari b7e0f65b40
gnu: imagemagick: Update to 6.9.6-5.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.6-5.
2016-11-19 10:48:51 -05:00
Rene Saavedra 3446ffb57c
gnu: gnome-control-center: Add gdk-pixbuf input.
* gnu/packages/gnome.scm (gnome-control-center)[inputs]: Add gdk-pixbuf.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-19 10:38:01 -05:00
ng0 8f49395064
gnu: Add emacs-danneskjold-theme.
* gnu/packages/emacs.scm (emacs-danneskjold-theme): New variable.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-11-19 21:31:20 +08:00
ng0 5cd4129221
gnu: emacs-cyberpunk-theme: Update to 1.18.
* gnu/packages/emacs.scm (emacs-cyberpunk-theme): Update to 1.18.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-11-19 20:19:03 +08:00
Nicolas Goaziou fd057b84ec
gnu: emacs-org: Update to 20161118.
* gnu/packages/emacs.scm (emacs-org): Update to 20161118.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-11-19 20:09:50 +08:00
宋文武 e5aade794a
services: dicod-service: Honor 'dicod-configuration-dico'.
* gnu/services/dict.scm (dicod-shepherd-service): Use
'dicod-configuration-dico' of config.
2016-11-19 19:37:30 +08:00
宋文武 ae1e2133b9
gnu: opensmtpd: Correct CA certificates file path.
* gnu/packages/mail.scm (opensmtpd)[arguments]: Pass
'--with-path-CAfile=/etc/ssl/certs/ca-certificates.crt' to #:configure-flags.
2016-11-19 19:19:16 +08:00
Ricardo Wurmus cfcef2c2ac
gnu: gx-switchless-wah-lv2: Update to 0-2.7b0869120.
* gnu/packages/music.scm (gx-switchless-wah-lv2): Update to
0-2.7b0869120.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:16 +01:00
Ricardo Wurmus 8e6f6503f0
gnu: gx-slow-gear-lv2: Update to 0-2.cb852e042.
* gnu/packages/music.scm (gx-slow-gear-lv2): Update to 0-2.cb852e042.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:16 +01:00
Ricardo Wurmus a7cd2d44e1
gnu: gx-vintage-fuzz-master-lv2: Update to 0-2.0fec0bc1e.
* gnu/packages/music.scm (gx-vintage-fuzz-master-lv2): Update to
0-2.0fec0bc1e.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:16 +01:00
Ricardo Wurmus 1df4d85f8b
gnu: gx-super-fuzz-lv2: Update to 0-2.f40389575.
* gnu/packages/music.scm (gx-super-fuzz-lv2): Update to 0-2.f40389575.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:16 +01:00
Ricardo Wurmus c1802b0834
gnu: gx-voodoo-fuzz-lv2: Update to 0-2.aec7889b4.
* gnu/packages/music.scm (gx-voodoo-fuzz-lv2): Update to 0-2.aec7889b4.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:15 +01:00
Ricardo Wurmus dad6cb50da
gnu: gx-hyperion-lv2: Update to 0-2.6a096a664.
* gnu/packages/music.scm (gx-hyperion-lv2): Update to 0-2.6a096a664.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:15 +01:00
Ricardo Wurmus 31de5e2244
gnu: gx-saturator-lv2: Update to 0-2.0b581ac85.
* gnu/packages/music.scm (gx-saturator-lv2): Update to 0-2.0b581ac85.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:15 +01:00
Ricardo Wurmus 4ed4bb11cb
gnu: qsynth: Update to 0.4.3.
* gnu/packages/audio.scm (qsynth): Update to 0.4.3.
2016-11-19 11:26:15 +01:00
Ricardo Wurmus f2bd238bcd
gnu: synthv1: Update to 0.8.0.
* gnu/packages/music.scm (synthv1): Update to 0.8.0.
2016-11-19 11:26:15 +01:00
Nicolas Goaziou 2c453091e4
gnu: wireshark: Update to 2.2.2.
* gnu/packages/networking.scm (wireshark): Update to 2.2.2.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-11-19 16:33:55 +08:00
Nicolas Goaziou ce53f5cbf0
gnu: giac-xcas: Update to 1.2.2-103
* gnu/packages/algebra.scm (giac-xcas): Update to 1.2.2-103.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-11-19 16:28:58 +08:00
Muriithi Frederick Muriuki 6689c636d0
gnu: Add ruby-net-http-digest-auth.
* gnu/packages/ruby.scm (ruby-net-http-digest-auth): New variable.
2016-11-19 15:16:19 +10:00
Ben J Woodcroft 4af80275a8
gnu: ruby-2.2: Update to 2.2.6.
* gnu/packages/ruby.scm (ruby-2.2): Update to 2.2.6.
2016-11-19 07:48:01 +10:00
ng0 175d626478
gnu: mps-youtube: Disable tests.
* gnu/packages/video.scm (mps-youtube): Disable tests.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-18 15:16:48 -05:00
ng0 ed3fee5f7b
gnu: python-pafy: Disable tests.
* gnu/packages/python.scm (python-pafy): Disable tests.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-18 15:16:48 -05:00
Petter 01278f16a9
gnu: Add xcalib.
* gnu/packages/xdisorg (xcalib): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-18 15:05:59 -05:00
Ludovic Courtès c2662820f3
gnu: emacs-org: Update to 20161102.
* gnu/packages/emacs.scm (emacs-org)[source]: Switch to elpa.gnu.org so
'guix refresh' can pick it up.  Update to 20161102.
2016-11-18 18:28:03 +01:00
Ludovic Courtès 8134dc1f74
gnu: guile@2.0.13: Fix non-determinism issue in REPL server test.
* gnu/packages/patches/guile-repl-server-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/guile.scm (guile-2.0.13)[source]: Use it.
2016-11-18 18:28:02 +01:00
Danny Milosavljevic 651049789f
gnu: xonsh: Update to 0.4.7.
* gnu/packages/shells.scm (xonsh): Update to 0.4.7.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-18 17:02:30 +01:00
宋文武 d7da76044b
gnu: opensmtpd: Build man pages.
* gnu/packages/mail.scm (opensmtpd)[native-inputs]: Add groff.
2016-11-18 22:19:49 +08:00
Efraim Flashner 4d17fe2ad3
gnu: python-gst: Update to 1.10.1.
* gnu/packages/gstreamer.scm (python-gst, python2-gst): Update to 1.10.1.
2016-11-18 14:26:40 +02:00
Efraim Flashner 950548b0f7
gnu: gst-libav: Update to 1.10.1.
* gnu/packages/gstreamer.scm (gst-libav): Update to 1.10.1.
2016-11-18 14:26:40 +02:00
Efraim Flashner 2e747a3ff6
gnu: gst-plugins-ugly: Update to 1.10.1.
* gnu/packages/gstreamer.scm (gst-plugins-ugly): Update to 1.10.1.
2016-11-18 14:26:39 +02:00
Efraim Flashner 95e89a4510
gnu: gst-plugins-bad: Update to 1.10.1 (Fixes security issues).
* gnu/packages/gstreamer.scm (gst-plugins-bad): Update to 1.10.1.
2016-11-18 14:26:39 +02:00
Efraim Flashner faa3c13920
gnu: gst-plugins-good: Update to 1.10.1.
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.10.1.
2016-11-18 10:01:29 +02:00
Efraim Flashner de0e591a53
gnu: gst-plugins-base: Update to 1.10.1.
* gnu/packages/gstreamer.scm (gst-plugins-base): Update to 1.10.1.
2016-11-18 10:01:29 +02:00
Efraim Flashner 28e3663134
gnu: gstreamer: Update to 1.10.1.
* gnu/packages/gstreamer.scm (gstreamer): Update to 1.10.1.
2016-11-18 10:01:17 +02:00
Ludovic Courtès 1f9803c2a4
services: static-networking: Add netmask.
Reported by Mathieu Lirzin and Andreas Enge.

* gnu/services/networking.scm (<static-networking>)[netmask]: New
field.
(static-networking-service-type): Honor it.
* gnu/services/networking.scm (static-networking-service): Add #:netmask
and honor it.
* doc/guix.texi (Networking Services): Adjust accordingly.
2016-11-17 23:21:48 +01:00
Ludovic Courtès 056d0b4034
tests: basic: Fix harmless thinko.
* gnu/tests/base.scm (run-basic-test)["login on tty1"]: Move the
file-waiting loop inside the 'marionette-eval' body.  Before that, we
were waiting for the file to appear on the host, which would never
happen, meaning that we were always waiting for 15 seconds.
2016-11-17 23:21:48 +01:00
Leo Famulari 175c910380
gnu: mpop: Use 'sourceforge' mirror.
This is a followup to commit 5837e69936.

* gnu/packages/mail.scm (mpop)[source]: Use 'sourceforge' mirror.
2016-11-17 15:56:06 -05:00
Arun Isaac 5837e69936
gnu: mpop: Update to 1.2.6.
* gnu/packages/mail.scm (mpop): Update to 1.2.6.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-17 17:45:38 +01:00
Efraim Flashner e5294500d6
gnu: obs: Update to 0.16.5.
* gnu/packages/video.scm (obs): Update to 0.16.5.
2016-11-17 07:26:20 +02:00
Efraim Flashner ca569eb89f
gnu: aria2: Update to 1.29.0.
* gnu/packages/bittorrent.scm (aria2): Update to 1.29.0.
2016-11-17 07:26:20 +02:00
Mark H Weaver 2f63e087fe
Revert "gnu: icecat: Enable gtk3 support."
This reverts commit eaf72e218e.

IceCat misbehaves with gtk+3, most notably the scroll bar handles are
invisible.  Here we revert back to gtk+2 until these problems can be
addressed.
2016-11-16 22:34:11 -05:00
Eric Bavier fe047e1380
gnu: Add Handbrake.
* gnu/packages/video.scm (handbrake): New variable.
* gnu/packages/patches/handbrake-pkg-config-path.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-11-16 20:58:12 -06:00
Leo Famulari 1339a8ed1c
gnu: libtiff: Fix some buffer overflows.
* gnu/packages/patches/libtiff-uint32-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
2016-11-16 19:59:28 -05:00
Leo Famulari 7cea56e2ac
gnu: libtiff: Fix CVE-2016-9297.
* gnu/packages/patches/libtiff-CVE-2016-9297.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
2016-11-16 19:59:24 -05:00
Efraim Flashner d87c201f96
gnu: jasper: Update to 1.900.29.
* gnu/packages/image.scm (jasper): Update to 1.900.29.
[inputs]: Add libjpeg.
2016-11-16 22:06:33 +02:00
Mark H Weaver 9cdb405b81
gnu: icecat: Remove unneeded patch.
This is a followup to commit 1a87aa7567.

* gnu/packages/gnuzilla.scm (icecat)[sources][patches]: Remove patch for
CVE-2016-5296, which is for a bundled copy of pixman that is
subsequently deleted by a snippet.
2016-11-16 14:14:25 -05:00
Marius Bakke d3e5dc0a44
gnu: perl-dbd-mysql: Update to 4.039 [Fixes CVE-2016-1249].
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.039.
[source]: Update CPAN URI.
2016-11-16 18:33:57 +00:00
Leo Famulari 1d87fdf531
gnu: ncmpcpp: Update to 0.7.7.
* gnu/packages/mpd.scm (ncmpcpp): Update to 0.7.7.
2016-11-16 13:09:36 -05:00
Leo Famulari 0ffa8b8e7b
gnu: shotwell: Update to 0.25.0.1.
* gnu/packages/gnome.scm (shotwell): Update to 0.25.0.1.
2016-11-16 13:09:36 -05:00
Mark H Weaver 1a87aa7567
gnu: icecat: Add fixes from Firefox ESR 45.5.0.
Includes fixes for CVE-2016-5290, CVE-2016-5291, CVE-2016-5297, CVE-2016-9064,
and CVE-2016-9066.

* gnu/packages/gnuzilla.scm (icecat)[source][patches]: Add fixes for
aforementioned CVEs and other selected fixes from Firefox ESR 45.5.0.  Note
that the first six patches of CVE-2016-5290 and the patch for CVE-2016-9066
were already present, but were labeled by mozilla bug number instead of CVE.
* gnu/packages/patches/icecat-CVE-2016-9064.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-11-16 13:04:02 -05:00
Mark H Weaver 56ac2bf442
gnu: pixman: Add fix for CVE-2016-5296.
* gnu/packages/patches/pixman-CVE-2016-5296.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xdisorg.scm (pixman)[replacement]: New field.
(pixman/fixed): New variable.
2016-11-16 13:03:56 -05:00
宋文武 eb4b3e4bef
gnu: opensmtpd: Update to 6.0.2p1.
* gnu/packages/mail.scm (opensmtpd): Update to 6.0.2p1.
[arguments]: Pass '--with-path-sock=/var/run' to #:configure-flags.
2016-11-16 21:00:40 +08:00
Mark H Weaver d55019136e
gnu: linux-libre: Update to 4.8.8.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.8.
2016-11-16 00:08:19 -05:00
Mark H Weaver 7d154949c9
gnu: linux-libre@4.4: Update to 4.4.32.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.32.
2016-11-16 00:06:46 -05:00
Hartmut Goebel d46491779e
gnu: python-awscli: fix inputs.
* gnu/packages/python.scm (python-awscli): [inputs] change to
  [native-inputs].
2016-11-15 22:36:22 +01:00
Hartmut Goebel 8fa6890b6c
gnu: python-botocore: fix inputs.
* gnu/packages/python.scm (python-botocore): [inputs] change to
  [native-inputs].
2016-11-15 22:36:21 +01:00
Hartmut Goebel 05e2e4cf00
gnu: python-pip: fix inputs.
* gnu/packages/python.scm (python-pip): [inputs] change to
  [native-inputs].
2016-11-15 22:36:21 +01:00
Hartmut Goebel e62600feb6
gnu: python2-ipython: fix inputs.
* gnu/packages/python.scm (python2-ipython): [inputs] change to
  [native-inputs].
2016-11-15 22:36:20 +01:00
Hartmut Goebel 5b1416d983
gnu: python-betamax: fix inputs.
* gnu/packages/python.scm (python-betamax): [inputs] change to
  [propagated-inputs].
2016-11-15 22:36:19 +01:00
Hartmut Goebel 1b5241c515
gnu: python-scikit-learn: Remove useless property "python2-variant".
The Python 2 packages does not change the definition, thus the
propery is useless.

* gnu/packages/python.scm (python-scikit-learn): [properties]:
  Remove  "python2-variant". (python2-scikit-learn): Remove
  now needless "strip-python2-variant".
2016-11-15 22:36:18 +01:00
Hartmut Goebel bac23672ee
gnu: python-tables: Remove python byte-code files from source.
* gnu/packages/python.scm (python-tables)[source]: Add snippet.
2016-11-15 22:36:18 +01:00
Hartmut Goebel b9c8ccce04
gnu: python-flake8-2.2.4: Remove python byte-code files from source.
* gnu/packages/python.scm (python-flake8-2.2.4)[source]: Add snippet.
2016-11-15 22:36:17 +01:00
Hartmut Goebel 011271c769
gnu: python-flake8: Remove python byte-code files from source.
* gnu/packages/python.scm (python-flake8)[source]: Add snippet.
2016-11-15 22:36:09 +01:00
Hartmut Goebel bac6816879
gnu: python-pytest-django: Remove needless propagated input "python-py".
This is already propagated by python-pytest.

* gnu/packages/python.scm (python-pytest-django) [propagated-inputs]:
  Remove python-py.
2016-11-15 22:32:02 +01:00
Hartmut Goebel de5bc89093
gnu: python2-pbcore: Fix inputs:
* gnu/packages/bioinformatics.scm (python2-pbcore) [inputs] change to
  [propagated-inputs]. [native-inputs]: Remove python-docutils, which
  comes with sphinx. [former propagated-inputs]: move all (which is only
  pyxb) to [inputs].
2016-11-15 22:32:01 +01:00
Hartmut Goebel 54c85e12fd
gnu: python2-warpedlmm: Remove phase remove-bin-directory.
This directory did contain contain wrappers for `nose`, which should not
be there anyway (since nose already was a native-input). The new
python build system no longer creates this directory, while the old one
did. (This difference is due to the bloody details of how packages are
installed.)

* gnu/packages/bioinformatics.scm (python2-warpedlmm)
  [modify-phases] Remove, since remove-bin-directory was the only
  modification here.
2016-11-15 22:32:00 +01:00
Hartmut Goebel 3221207417
gnu: khal: Fix build.
The old one was plain wrong and only worked by luck since the old
python build system did manipulate PYTHONPATH.

* gnu/packages/calendar.scm(khal)[phase manpage]: Use
  add-installed-pythonpath.
2016-11-15 22:31:59 +01:00
Hartmut Goebel 632735f215
gnu: python-testlib: Remove useless self-defined phase "unpack".
Unzipping is now done by standard-phase "unpack" automatically.

* gnu/packages/python.scm (python-testlib, python2-testlib)[phases] No longer
  replace "unpack".
2016-11-15 22:31:59 +01:00
Hartmut Goebel 251ed7f2fe
gnu: python-sphinxcontrib-newsfeed: Remove needless input.
* gnu/packages/python.scm (python-sphinxcontrib-newsfeed) [propagated-inputs]:
  Remove python-docutils, already porpagated by python-sphinx.
2016-11-15 22:31:58 +01:00
Hartmut Goebel 38ceb106bd
gnu: python-nautilus: Correct inputs
* gnu/packages/python.scm(python-nautilus, python2-nautilus):
  [propagated-inputs] remove python-graphql-core, python-graphql-relay,
  python-requests: not listed and already propagated by others. Remove
  pycparser: not listed, not used in source. Move python-nose2 to
  [native-inputs] (used for tests only).
2016-11-15 22:31:57 +01:00
Hartmut Goebel 4e0969686c
gnu: python-freezegun: Correct input.
* u/packages/python.scm(python-freezegun)[native-inputs] move
  python-dateutils-2 to [propagated-inputs].
2016-11-15 22:31:56 +01:00
Hartmut Goebel fd1d6de729
gnu: python-consul: Correct inputs.
* gnu/packages/python.scm(python-consul)[native-inuts] move python-requests
  and python-six to [propagated-inputs].
2016-11-15 22:31:55 +01:00
Hartmut Goebel 2c199b5527
gnu: python-prompt-toolkit: Correct inputs
* gnu/packages/python.scm(python-prompt-toolkit)[native-inputs] move
  python-six to [propagated-inputs]. Remove now empty [native-inputs].
2016-11-15 22:31:55 +01:00
Hartmut Goebel d8ea5f2f27
gnu: python-responses: Correct inputs
* gnu/packages/python.scm(python-responses)[native-inputs] move python-cookies
  to [propagated-inputs]
2016-11-15 22:31:54 +01:00
Hartmut Goebel a0a0985978
gnu: python-sphinxcontrib-programoutput: Remove needless input.
This is an indirect requirement and propagated by python-sphinx already.

* gnu/packages/python.scm(python-sphinxcontrib-programoutput)
  [propagated-inputs]: Remove python-docutils.
2016-11-15 22:31:53 +01:00
Hartmut Goebel 47c7dc4a3f
gnu: python-sphinx-repoze-autointerface: Remove needless input.
This is an indirect requirement and propagated by python-sphinx already.

* gnu/packages/python.scm(python-sphinx-repoze-autointerface)
  [propagated-inputs]: Remove python-docutils.
2016-11-15 22:31:52 +01:00
Hartmut Goebel 06f1d73ed4
gnu: python-celery: Remove needless inputs.
These are indirect requirements and propagated by python-kombu.

* gnu/packages/python.scm(python-celery)[propagated-inputs] Remove python-amqp
  and python-anyjson.
2016-11-15 22:31:51 +01:00
Hartmut Goebel f7989b8bb0
gnu: Remove some outdated comments.
These comments were about setuptools used at runtime for pkg_resources.

* gnu/packages/python.scm: Remove some outdated comments.
2016-11-15 22:31:50 +01:00
Hartmut Goebel 7ba07edfb1
gnu: python-tox: Update FIXME comments.
* gnu/packages/python.scm(python-tox)[arguments]: Update FIXME
  comment. [inputs]: Add FIXME comment.
2016-11-15 22:31:49 +01:00
Hartmut Goebel 8322749a1c
gnu: python-urllib3: update comment.
* gnu/packages/python.scm(python-urllib3)[propagated-inputs]: Update comment.
2016-11-15 22:31:49 +01:00
Hartmut Goebel b9fc496ff6
gnu: python-wsgi-intercept: Correct inputs.
* gnu/packages/python.scm(python-wsgi-intercept): [native-inputs]: move
  python-six to [propagated-inputs].  [propagated-inputs] move
  python-httplib2, python-requests to [native-inputs].
2016-11-15 22:31:48 +01:00
Hartmut Goebel a5333f7c61
gnu: python-websocket-client: Correct inputs.
* gnu/packages/python.scm (python-websocket-client)[native-inputs] change to
  [propagated-inputs], remove a wrong comment.
2016-11-15 22:31:47 +01:00
Hartmut Goebel fd8e23b7b3
gnu: python-zope-security: Correct inputs.
* gnu/packages/python.scm(python-zope-security)[native-inputs] New element,
  move python-zope-component, python-zope-configuration, python-zope-location,
  python-zope-testrunner, python-zope-testing here.
2016-11-15 22:31:46 +01:00
Hartmut Goebel 861f70c9da
gnu: python-configobj: Correct inputs.
* gnu/packages/python.scm(python-configobj)[native-inputs] change to
  [propagated-inputs].
2016-11-15 22:31:46 +01:00
Hartmut Goebel d27f176a72
gnu: python-zope-location: Correct inputs.
* gnu/packages/python.scm(python-zope-location)[native-inputs] change to
  [propagated-inputs].
2016-11-15 22:31:45 +01:00
Hartmut Goebel 38d480a8a6
gnu: python-zope-interface: Correct inputs.
* gnu/packages/python.scm(python-zope-interface)[propagated-inputs] change to
  [native-inputs].
2016-11-15 22:31:44 +01:00
Hartmut Goebel 2887700e4d
gnu: python-pathpy: Build documentation.
* gnu/packages/python.scm (python-pathpy, python2-pathpy)
  [output] Add output "doc".
  [native-inputs]: Add python-sphinx and python-rst.linker
  [build-doc], [install-doc]: New build phases.
2016-11-15 22:31:43 +01:00
Hartmut Goebel fe94cf0cdd
gnu: Add python-rst.linker, python2-rst.linker.
* gnu/packages/python.scm (python-rst.linker, python2-rst.linker): New
  variables.
2016-11-15 22:31:43 +01:00
Hartmut Goebel 213d1745c6
gnu: python-numpydoc: Correct inputs.
* gnu/packages/python.scm (python-numpydoc, python-numpydoc)
  [native-inputs]: Remove python-docutils. Move python-shpinx to
  [propagated-inputs].
2016-11-15 22:31:42 +01:00
Hartmut Goebel cf8124b017
gnu: python-redis: Remove unused input.
* gnu/packages/python.scm (python-redis, python2-redis) Comment out
  [native-inputs] since these are used only for running tests, which
  is disabled since it requires a Redis server.
2016-11-15 22:31:41 +01:00
Hartmut Goebel 1273359455
gnu: python2-scikit-image: Remove needless native-input and inheritance.
Remove last additional [native-inputs] python-mock, thus there is no
need to inherit python-scikit-image package. Simply use
package-with-python2.

* gnu/packages/python.scm: (python-scikit-image): [properties]: Remove
  python2-variant. (python2-scikit-image) Use simply
  "package-with-python2" after removing last [native-inputs] python-mock.
2016-11-15 22:31:40 +01:00
Hartmut Goebel ddd1dc3d2d
gnu: python2-scikit-image: Remove needless propagated-input.
* gnu/packages/python.scm: (python2-scikit-image)
  [propagated-inputs]: Remove python-pytz, it does not occur anywhere in
  the source.
2016-11-15 22:31:39 +01:00
Hartmut Goebel b83e23337b
gnu: python-scikit-image: Correct inputs.
* gnu/packages/python.scm: (python-scikit-image, python2-scikit-image)
  [propagated-inputs]: Move python-numpy and python-six to [native-inputs].
  Add comment.
2016-11-15 22:31:39 +01:00
Hartmut Goebel 9fbe7b2bca
gnu: python-blinker: No longer disable tests.
The package does not provide tests, but there is no need to disable them.
Having them enabled allows running them if some newer version may provide
tests.

* gnu/package/python.scm (python-blinker, python2-blinker):
  [arguments]: Remove.
2016-11-15 22:31:38 +01:00
Hartmut Goebel 7c88bcf4bb
gnu: python-feedgenerator: Remove python byte-code files from source.
* gnu/packages/python.scm (python-feedgenerator, python2-feedgenerator)
  [source]: Add snippet.
2016-11-15 22:31:37 +01:00
Hartmut Goebel f052ec9a50
gnu: python-joblib: Add comment.
* gnu/packages/python.scm (python-joblib): Add comment.
2016-11-15 22:31:36 +01:00
Hartmut Goebel 6aa5f1ca24
gnu: python-joblib: Remove python byte-code files from source.
* gnu/packages/python.scm (python-joblib, python2-joblib)[source]:
  Add snippet.
2016-11-15 22:31:36 +01:00
Hartmut Goebel bb06aa3446
gnu: python-oauthlib, python-oauthlib2: Correct inputs.
* gnu/packages/python.scm (python-oauthlib) [propagated-inputs] Move all to
  [native-inputs]. [native-inputs]: Remove python-mock, python-coverage.
  (python2-oauthlib)[native-inputs]: Add python2-mock.
2016-11-15 22:31:35 +01:00
Hartmut Goebel 130fe99410
gnu: python-pyjwt: Add missing inputs and enable test-suite.
* gnu/packages/python.scm (python-pyjwt) [native-inputs]: Add
  python-pytest and python-pytest-cov. [arguments]. Remove.
2016-11-15 22:31:34 +01:00
Hartmut Goebel f78e1c27ef
gnu: python-cov-core: Fix imports.
* gnu/packages/python.scm (python-cov-core) [inputs]: change
  to [propagated-inputs].
2016-11-15 22:31:33 +01:00
Hartmut Goebel 25b2c47d75
gnu: python-statsmodels: Fix build
* gnu/packages/statistics.scm (python-statsmodels): [check] set
  PYTHONPATH prior to running tests.
2016-11-15 22:31:33 +01:00
Hartmut Goebel d5e41cf28c
gnu: pytest-mock: remove needless propagated input "python-py".
This is not listed as an requirement and is already propagated by
python-pytest.

* gnu/packages/python.scm (python-pytest-mock, python2-pytest-mock):
  [propagated-inputs]: Remove python-py.
2016-11-15 22:31:32 +01:00
Hartmut Goebel 8e73d3baab
gnu: python-testscenarios: remove needless input "mimetools".
This does not occur in the source.

* gnu/packages/python.scm (python-testscenarios, python2-testscenarios)
  [propagated-inputs]: Remove python-mimeparse.
2016-11-15 22:31:31 +01:00
Hartmut Goebel e0ed457944
gnu: python-setuptools: remove pre-built binaries from source.
These are used to build self-extracting installers for Windows.

* gnu/packages/python.scm (python-setuptools, python2-setuptools) [source]:
  Add snippet to delete *.exe files.
2016-11-15 22:31:30 +01:00
Hartmut Goebel c4516ad206
gnu: python-pytest-xdist: Remove needless input python-apipkg.
* gnu/packages/python.scm (python-pytest-xdist): Remove input
  python-apipkg.
2016-11-15 22:31:29 +01:00
Hartmut Goebel b52ad3714a
gnu: python-subunit, python-testrepository: Fix inputs
* gnu/packages/python.scm (python-subunit, python2-subunit):
  [propagated-inputs]:: Add python-extras, remove python-testtools, move
  python-testscenarios to [native-inputs].  (python-testrepository,
  python2-testrepository): [native-inputs] move python-fixtures and
  python-subunit to [propagated-inputs]
2016-11-15 22:31:29 +01:00
Hartmut Goebel 521b77729e
gnu: python-scripttest: Correct inputs.
python-pytest is only required for testing, not at run-time.

* gnu/packages/python.scm (python-singledispatch, python2-singledispatch):
  [propagated-inputs] Move python-pytest to [native-inputs].
2016-11-15 22:31:28 +01:00
Hartmut Goebel abcc7a0eb9
gnu: python-pandas: Fix build.
* gnu/packages/python.scm (python-pandas): Add python-cython to
  native-inputs.
2016-11-15 22:31:27 +01:00
Hartmut Goebel e116d100fd
gnu: openstack: Correct inputs.
* gnu/packages/openstack.scm (python-os-testr) Propagate input
  python-subunit, change all other inputs to native-inputs.
  (python-mox3): Remove needless input python-six.
  (python-stevedore, python-requests-mock): Move python-pbr to
  native-inputs.
2016-11-15 22:31:27 +01:00
Hartmut Goebel 48160559a1
gnu: thefuck: Fix build.
Requires setuptools >= 17.1 due to some features used, while our
python currently only includes 12.0.

* gnu/packages/admin.scm (thefuck): Add setuptools to native-inputs.
2016-11-15 22:31:26 +01:00
Hartmut Goebel a08a835034
gnu: vdirsyncer: Fix build by setting correct PYTHONPATH.
For thus, use add-installed-pythonpath.

* gnu/packages/dav.scm (vdirsyncer): set PYTHONPATH using
  add-installed-pythonpath.
2016-11-15 22:31:25 +01:00
Hartmut Goebel eee5cd0440
gnu: python-ipython: Fix build.
* gnu/packages/python.scm (python-ipython, python2-ipython) [check,
  install-doc] set PYTHONPATH prior to running tests.
2016-11-15 22:31:24 +01:00
Hartmut Goebel d548e6aa06
gnu: python-scipy: Fix build.
* gnu/packages/python.scm (python-scipy) Use add-installed-pythonpath.  Add
  dummy newlines character to string to make emacs happy.
2016-11-15 22:31:23 +01:00
Hartmut Goebel ca33a3ad97
gnu: python-matplotlib: Fix build.
* gnu/packages/python.scm (python-matplotlib, python2-matplotlib): Correct
  inputs. [install-doc] set PYTHONPATH prior to building docs.
2016-11-15 22:31:23 +01:00
Hartmut Goebel 2efabc5589
gnu: python-numpy-bootstrap, python-numpy: Fix build.
* gnu/packages/python.scm (python-numpy-bootstrap): Correct inputs, use
  modify-phases, add dummy newlines character to string to make emacs happy,
  set PYTHONPATH prior to running tests. (python-numpy): propagate inputs, set
  PYTHONPATH prior to building docs.
2016-11-15 22:31:22 +01:00
Hartmut Goebel 9e8c6a37db
gnu: python-fonttools: Remove intervening directory in site-packges.
* gnu/packages/python.scm (python-fonttools): Add phase patch-setuppy.
2016-11-15 22:31:21 +01:00
Hartmut Goebel b72ac1b54b
gnu: python2-pysnptools: Correct inputs.
dateutil, pytz, and six do not occur in the code.

Remove python-dateutil, python-pytz, python-six from inputs;
Move python-cython to native-inputs; move python-pandas to
propagated-inputs.
2016-11-15 22:31:21 +01:00
Hartmut Goebel e408ffc302
gnu: python-zope-testing: Remove needless input.
* gnu/packages.python.scm (python-zope-testing): Remove
  python-zope-interface from native-imports.
2016-11-15 22:31:20 +01:00
Hartmut Goebel 47f77210fc
gnu: python-zope-schema: Add missing inputs.
* gnu/packages.python.scm (python-zope-schema): Add python-coverage and
  python-nose to native-inputs.
2016-11-15 22:31:19 +01:00
Hartmut Goebel 05c2fd3685
gnu: python-pytest-flakes: Fix build.
* python.scm (python-pytest-flakes): Set PYTHONPATH prior to running tests.
2016-11-15 22:31:18 +01:00
Hartmut Goebel 6151120a71
gnu: python-pillow: Fix build.
* gnu/packages/python.scm (python-pillow)[check-installed]: Add
  installed site-package to PYTHONPATH.
2016-11-15 22:31:17 +01:00
Hartmut Goebel 5e1c9d242a
gnu: python-singledispatch: correct inputs.
python-six is only required for conversion, not at run-time

* gnu/packages/python.scm (python-singledispatch, python2-singledispatch):
  [inputs] Move python-six to [native-inputs].
2016-11-15 22:31:17 +01:00
Hartmut Goebel d2a8db92fe
gnu: python-pbr: Rework bootstrapping.
For breaking the cyclic build, formerly a separate (older) version was used
for bootstrapping.  Now we use the same version just without tests and without
test dependencies.

* gnu/packages/python.scm (python-pbr-0.11, python2-pbr-0.11):
  replace by … (python-pbr-minimal, python2-pbr-minimal).
  (python-pbr) inherit from python-pbr-minimal, adding the requirements for
  testing and building the documentation.
  (python-fixtures) [native-inputs] Use python-pbr-minimal here.
  (python-testrepository): [native-inputs] Add it here, it was a missing
  dependency.
2016-11-15 22:31:16 +01:00
Hartmut Goebel b2e66edf52
gnu: python-testrepositoryfixture: Correct inputs.
python-fixtures is required only for building.

* gnu/packages/python.scm (python-testrepository) [propagated-inputs] move
  python-fixtures to [native-inputs].
2016-11-15 22:31:15 +01:00
Hartmut Goebel 424f0a4175
gnu: python-fixture: Enable tests.
* gnu/packages/python.scm (python-fixtures) [arguments] remove
  keyword `#:tests?`.
2016-11-15 22:31:14 +01:00
Hartmut Goebel ae92caddc5
gnu: python-fixture: Correct inputs.
python-pbr is required only for building.

* gnu/packages/python.scm (python-fixtures) [propagated-inputs] move
  python-pbr-0.11 to [native-inputs].
2016-11-15 22:31:13 +01:00
Hartmut Goebel 6986669012
gnu: python-hdf5: Correct inputs.
According to setup.py python-six is requried at run-time, thus has to be a
propagated input.

* gnu/packages/python.scm (python-hdf5) [inputs]: Move `python-six` to
  [propagated-inputs].
2016-11-15 22:31:12 +01:00
Hartmut Goebel 9820a02858
gnu: python-h5py: Remove needless "python2-variant" property.
* gnu/packages/python.scm (python-h5py) [python2-variant]: Remove
  property. (python2-h5py): Don't strip property "strip-python2-variant".
2016-11-15 22:31:12 +01:00
Hartmut Goebel d9a6e221e2
gnu: python-ccm: Update synopsis and description.
* gnu/packages/python.scm (python-ccm): Update synopsis and description.
2016-11-15 22:31:11 +01:00
Hartmut Goebel e165f137d8
gnu: python-ccm: Add missing input python-psutil.
* gnu/packages/python.scm (python-ccm) [propagated-inouts]: Add
  python-psutil.
2016-11-15 22:31:10 +01:00
Hartmut Goebel ef7451131a
gnu: python-sphinx-rtd-theme: Remove inputs.
This package is a plugin for python-sphinx, it does not require python-sphinx
nor docutils, but is an add-on for python-sphinx and should not be installed
by it's own.

* gnu/packages/python/.scm (python-sphinx-rtd-theme)[inputs]: Remove.
2016-11-15 22:31:09 +01:00
Hartmut Goebel ce40b38395
gnu: python-pytest-cov: Use upstream options for testing.
* gnu/packages/python.scm (python-pytest-cov): Replace phase "check"
  by one passing the options found in upstream's tox.ini-file
  to "python setup.py check".
2016-11-15 22:31:08 +01:00
Hartmut Goebel b3e8b4bd0f
gnu: scons: Do not use setuptools for building.
* gnu/packages/python.scm (scons): Set "#:use-setuptools" to #f.
2016-11-15 22:31:07 +01:00
Hartmut Goebel f2516de2fc
gnu: Fix python inputs, part 7: Ensure python-cython is a native-input.
* gnu/packages/audio.scm (python-pyliblo): [inputs] Move python-cyton to
  [native-inputs].
* gnu/packages/bioinformatics.scm (python2-pybedtools): dito.
* gnu/packages/music.scm (beast, python-pyportmidi): dito.
* gnu/packages/python.scm (python2-fastlmm, python-kivy): dito.
2016-11-15 22:31:07 +01:00
Hartmut Goebel 328bb95d35
gnu: Fix python inputs, part 6: some inputs become native-inputs.
This patch handles the inputs which are native-inputs almost always like nose,
sphinx, and pytest.

* gnu/packages/python.scm
  (python-jsonschema, python-numpydoc, python-mccabe, python-mistune,
  python-ptyprocess, python-webob, python-apipkg, python-flake8-2.2.4)[inputs]
  change to [native-inputs].
  (python-flake8, tox) Likewise, add a comment.
  (python-scikit-learn, python-numpy)[native-inputs] New element, move
  python-nose here.
  (python2-kombu)[inputs] change to [native-inputs], use python-kombu's
  package-native-inputs.
2016-11-15 22:31:06 +01:00
Hartmut Goebel 482d95918e
gnu: Fix python inputs, part 5: some inputs become propagated-inputs
* gnu/packages/openstack.scm
  (python-os-client-config)[inputs] change to
  [native-inputs]. [propagated-inputs]: New element, move python-appdirs,
  python-pyyaml here.
  (python-git-review)[propagated-inputs]: New element, move python-requests
  here.
* gnu/packages/python.scm
  (python-rpy2)[propagated-inputs]: New element, move python-six here.
  (python-xcffib)[inputs] move python-six to [propagated-inputs].
  (python-flake8)[propagated-inputs]: New element, move python-pep8,
  python-pyflakes, python-mccabe here.
  (python-flake8-2.2.4)[propagated-inputs]: New element, move python-pep8,
  python-pyflakes, python-mccabe here.
  (python-pytest)[propagated-inputs]: New element, move python-py here.
  (python-tox)[propagated-inputs]: New element, move all inputs except of
  python-pytest here.
  (python-botocore)[propagated-inputs]: New element, move python-dateutil,
  python-docutils, python-jmespath here.
  (awscli)[propagated-inputs]: New element, move python-colorama,
  python-botocore, python-s3transfer, python-docutils, python-rsa here.
  (python-mako)[propagated-inputs]: New element, move python-markupsafe here.
* gnu/packages/qemu.scm(python-libvirt)[propagated-inputs]: New element, move
  python-lxml here.
2016-11-15 22:31:05 +01:00
Hartmut Goebel dae73d9b9a
gnu: Fix python inputs, part 3: all native-inputs become propagated-inputs.
This patch contains the changes in python.scm where all [native-inputs]
are changed to [propagated-inputs].

* gnu/packages/python.scm.scm (python-feedgenerator): All [native-inputs] are
  changed to [propagated-inputs].
2016-11-15 22:31:04 +01:00
Hartmut Goebel e7881f3db4
gnu: Fix python inputs, part 2: all inputs become native-inputs.
This patch contains the changes where all [inputs] are changed to
[native-inputs].

* gnu/packages/python.scm (python-pytest, python-fixtures,
  python-testrepository, python-virtualenv): All [inputs] are changed to
  [native-inputs].
* gnu/packages/openstack.scm (python-bandit, python-debtcollector,
  python-hacking, python-tempest-lib, python-oslo.config, python-oslo.context,
  python-oslo.i18n, python-oslo.log, python-oslo.serialization,
  python-oslosphinx, python-oslotest, python-oslo.utils): Likewise.
2016-11-15 22:31:03 +01:00
Hartmut Goebel f22efa0152
gnu: Fix python inputs, part 1: all inputs become propagated-inputs.
This patch contains the changes where all [inputs] are changed to
[propagated-inputs]

* gnu/packages/python.scm (python-passlib, python-paramiko, python-ccm,
  python-babel, python-keyring python-pandas, python-tzlocal,
  python-parse-type, python-nose2, python-pytest, python-pytest-mock,
  python-pytest-xdist, python-scripttest, python-testtools, python-pytest-cov,
  python-testscenarios, python-pbr-0.11, python-oauthlib, python-jinja2,
  python-sphinx, python-tzlocal, python-bugz, python2-pytest-mock, behave,
  pelican, sqlalchemy-utils, python-pygridtools, python-urwidtrees,
  python-tornado, python2-tornado, python-debian, python-execnet,
  python-pytest-cache, pytest-localserver, python-clint, python-rply,
  python-hy, python-rauth, python-rsa, python-celery, python-vobject, s3cmd,
  python-prompt-toolkit, ptpython, python-requests-oauthlib, python-stem,
  python-binaryornot, python2-binaryornot, python-nltk, python-pymongo,
  python-schematics, python-url, python2-url, python-freezegun,
  python-glances, python-graphql-core, python-graphql-relay, python-graphene,
  python-nautilus, python-s3transfer): All [inputs] become
  [propagated-inputs].
* gnu/packages/bioinformatics.scm (python-biopython): Likewise.
* gnu/packages/django.scm (pytest-django): Likewise.
* gnu/packages/mail.scm (python-mailmanclient): Likewise.
* gnu/packages/password-utils.scm (python-bcrypt): Likewise.
* gnu/packages/propbuf.scm (python-protobuf): Likewise.
* gnu/packages/rdf.scm (python-rdflib): Likewise.

SQACH all become propagated
2016-11-15 22:31:03 +01:00
Hartmut Goebel b41a05ce49
gnu: Remove work-arounds for bug 20765 (ensure uncompressed eggs).
Bug 20765 is solved since we build all Python packages using
option "--single-version-externally-managed".

* gnu/packages/bioinformatics.scm (pbtranscript-tofu): Remove
  configure-flags. (pepr): remove phase "disable-egg-generation".
* gnu/packages/pdf.scm (reportlab): Remove configure-flags.
* gnu/packages/python.scm (python-sphinx-rtd-theme, python2-elib.intl,
  python-pkgconfig, python-pytest-pep8, python-pytest-flakes): Remove
  configure-flags. (python-pillow) remove phase
  "disable-egg-generation". (python-libarchive-c) Remove patching
  setup.cfg.
* gnu/packages/statistics.scm (python-patsy): remove phase
  "prevent-generation-of-egg-archive".
* gnu/packages/tls.scm (python-acme): remove phase
  "disable-egg-compression".
* gnu/packages/tor.scm (onionshare): Remove configure-flags.
2016-11-15 22:31:02 +01:00
Hartmut Goebel d8013ee221
gnu: Remove needless inputs python-pip and python2-pip.
This is installed together with Python 3 anyway and for our build
of Python 2.

* gnu/packages/python.scm (python2-fixtures): [inputs] remove "python-pip".
* gnu/packages/pdf.scm (python2-reportlab): [native-inputs] remove
  "python2-pip". (python-reportlab)[properties]: remove "python2-variant".
2016-11-15 22:31:01 +01:00
Hartmut Goebel f210e94432
gnu: Remove python-setuptools and python2-setuptools from inputs (part 4b)
This patch contains the changes in python.scm where
setuptools are used in an inherited package and removing this input also
removes the need for inheriting the package. This is the case if adding
setuptools in the inherited packge was the only change.

Change this to not inherit and remove the new needless call to
"strip-python2-variant (where applicable).

* gnu/packages/python.scm.scm: Remove inheriting Python 2 packages inheriting
  from a Python 3 package if adding python-setuptools respective
  python2-setuptools to [inputs], [native-inputs] and [propagated-inputs] have
  been the sole reason for inheriting. Remove now needless [properties]
  "python2-variant" where applicable.
  (python2-lockfile, python2-keyring, python2-dateutil-2,
  python2-parsedatetime, python2-pandas, python2-pyicu, python2-pytest-cov,
  python2-pytest-runner, python2-pytest-xdist, python2-cov-core,
  python2-itsdangerous, python2-numexpr, python2-q, python2-sqlalchemy-utils,
  python2-alembic, python2-beautifulsoup4, python2-msgpack, python2-ipaddress,
  python2-atomicwrites, python2-apipkg, python2-execnet, python2-pytest-cache,
  python2-wtforms, python2-mako, python2-waitress, python2-wsgiproxy2,
  python2-pyquery, python2-webtest, python2-translitcodec, python2-editor,
  python2-sphinxcontrib-programoutput, python2-psycopg2, python2-vobject,
  python2-flask, python2-cookies, python2-responses, python2-future,
  python2-ply, python2-wcwidth, python2-prompt-toolkit, python2-jedi,
  python2-requests-oauthlib, python2-pyserial, python2-nltk, python2-pymongo,
  python2-sh, python2-schematics, python2-publicsuffix, python2-publicsuffix2,
  python2-url, python2-freezegun, python2-cachecontrol, python2-lit,
  python2-pytest-pep8, python2-pytest-flakes, python2-glances,
  python2-betamax, python2-file, python2-flask-babel, python2-furl,
  python2-imagesize python2-orderedmultidict, python2-pycodestyle,
  python2-vcversioner, python2-graphql-core, python2-graphql-relay,
  python2-validictory): Remove neesless input "python2-setuptools", don't
  inherit, don't call strip-python2-variant.
  (python-lockfile, python-keyring, python-dateutil-2, python-parsedatetime,
  python-pandas, python-pyicu, python-pytest-cov, python-pytest-runner,
  python-pytest-xdist, python-cov-core, python-itsdangerous, python-numexpr,
  python-q, python-sqlalchemy-utils, python-alembic, python-beautifulsoup4,
  python-msgpack, python-ipaddress, python-atomicwrites, python-apipkg,
  python-execnet, python-pytest-cache, python-wtforms, python-mako,
  python-waitress, python-wsgiproxy2, python-pyquery, python-webtest,
  python-translitcodec, python-editor, python-sphinxcontrib-programoutput,
  python-psycopg2, python-vobject, python-flask, python-cookies,
  python-responses, python-future, python-ply, python-wcwidth,
  python-prompt-toolkit, python-jedi, python-requests-oauthlib,
  python-pyserial, python-nltk, python-pymongo, python-sh, python-schematics,
  python-nltk, python-publicsuffix2, python-cachecontrol, python-lit,
  python-pytest-pep8, python-pytest-flakes, python-glances, python-betamax,
  python-file, python-flask-babel, python-furl, python-imagesize,
  python-orderedmultidict, python-pycodestyle, python-vcversioner,
  python-graphql-core, python-graphql-relay, python-validictory): Remove
  "python2-variant" property.
2016-11-15 22:29:00 +01:00
Hartmut Goebel 5c31f4aa7c
gnu: Remove python-setuptools and python2-setuptools from inputs (part 4a)
This patch contains the changes for all modules beside python.scm where
setuptools are used in an inherited package and removing this input also
removes the need for inheriting the package. This is the case if adding
setuptools in the inherited package was the only change.

Change this to not inherit and remove the new needless call to
"strip-python2-variant (if applicable).

* gnu/packages/bioinformatics.scm (python-biopython, python2-biopython,
  python-twobitreader, python2-twobitreader,
  python-plastid, python2-plastid,
  python2-pybigwig,
  python2-screed,
  sra-tools): No longer "inherit" Python 2 packages
  inheriting from a Python 3 package if the sole reason for inheriting was
  adding python-setuptools respective python2-setuptools to [inputs],
  [native-inputs] or [propagated-inputs]. Remove now needless [properties]
  "python2-variant" where applicable.
* gnu/packages/django.scm (python-pytest-django, python2-pytest-django,
  python-django-filter, python2-django-filter): Likewise.
* gnu/packages/gnupg.scm (python2-pygpgme): Likewise.
* gnu/packages/mail.scm (python-mailmanclient, python2-mailmanclient):
  Likewise.
* gnu/packages/mpd.scm (python-msp, python2-mpd2): Likewise.
* gnu/packages/music.scm (python-pylast, python2-pylast): Likewise.
* gnu/packages/openstack.scm (python-requests-mock, python2-requests-mock,
  python2-git-review): Likewise.
* gnu/packages/password-utils.scm (python2-bcrypt): Likewise.
* gnu/packages/protobuf.scm (python-protobuf, python2-protobuf): Likewise.
* gnu/packages/statistics.scm (python-patsy, python2-patsy): Likewise.
* gnu/packages/web.scm (python2-feedparser): Likewise.
2016-11-15 22:28:59 +01:00
Hartmut Goebel 00e10c6e67
gnu: Remove python-setuptools and python2-setuptools from inputs (part 3)
This patch contains the changes where setuptools are used in an inherited
package and removing this input keeps the need for inheriting the package.

* gnu/packages/bioinformatics.scm (python2-biom-format): Remove
  python-setuptools respective python2-setuptools from [inputs],
  [native-inputs] and [propagated-inputs] in Python 2 packages inheriting from
  a Python 3 package.
* gnu/packages/python.scm (python2-pytest-mock,
  python2-oauthlib,
  python2-seaborn,
  python2-tornado,
  python2-terminado,
  python2-rauth,
  python2-anyjson,
  python2-amqp,
  python2-kombu,
  python2-billiard,
  python2-celery,
  python2-jellyfish,
  python2-binaryornot,
  python2-natsort,
  python2-graphene): Likewise.
* gnu/packages/statistics.scm (python2-statsmodels): Likewise.
2016-11-15 22:28:38 +01:00
Hartmut Goebel f3b98f4fec
gnu: Remove python-setuptools and python2-setuptools from inputs (part 2)
This patch contains the changes where removing setuptools from the inputs
affected some code-lines beside.

* gnu/packages/admin.scm (ansible): Remove all [inputs], [native-inputs] and
  [propagated-inputs] where python-setuptools or python2-setuptools are the
  sole entries. Remove python-setuptools and python2-setuptools listed on a
  line by its own from [inputs], [native-inputs] and [propagated-inputs].

* gnu/packages/backup.scm (duplicity): Likewise.
* gnu/packages/bioinformatics.scm (bamm, python2-pybedtools,
  python2-bx-python, python2-dendropy, python-pysam, python2-pysam, clipper,
  crossmap, cutadapt, deeptools, grit, idr, python2-warpedlmm,
  pbtranscript-tofu, seqmagick): Likewise.
* gnu/packages/docbook.scm (dblatex): Likewise.
* gnu/packages/freedesktop.scm (python-pyxdg, python2-pyxdg): Likewise.
* gnu/packages/lirc.scm (python2-lirc): Likewise.
* gnu/packages/mp3.scm (eyed3): Likewise.
* gnu/packages/nutrition.scm (gourmet): Likewise.
* gnu/packages/openstack.scm (python-hacking, python2-hacking,
  python-os-testr, python2-os-testr,
  python-stevedore, python2-stevedore,
  python-tempest-lib, python2-tempest-lib,
  python-oslo.log, python2-oslo.log,
  python-keystoneclient, python2-keystoneclient): Likewise.
* gnu/packages/password-utils.scm (assword): Likewise.
* gnu/packages/python.scm (python-passlib, python2-passlib,
  python-babel, python2-babel,
  python-parse-type,
  python-pytest, python2-pytest,
  python-scripttest, python2-scripttest,
  python-testtools, python2-testtools,
  python-testscenarios, python2-testscenarios,
  python-subunit, python2-subunit,
  python-pbr-0.11,
  python-pbr, python2-pbr,
  python-testrepository, python2-testrepository,
  behave,
  python-wheel, python2-wheel,
  python-requests, python2-requests,
  python-jsonschema, python2-jsonschema,
  python-pyjwt, python2-pyjwt,
  python-virtualenv, python2-virtualenv,
  python-jinja2, python2-jinja2,
  python-joblib, python2-joblib,
  python-sphinx, python2-sphinx,
  python-feedgenerator, python2-feedgenerator,
  python-scikit-image, python2-scikit-image,
  python-redis, python2-redis,
  python2-fastlmm,
  python-numpydoc, python2-numpydoc,
  python-matplotlib, python2-matplotlib,
  python2-pysnptools,
  python-rpy2, python2-rpy2,
  python-pillow, python2-pillow,
  python-pycparser, python2-pycparser,
  python-cffi, python2-cffi,
  python-cairocffi, python2-cairocffi,
  python-drmaa, python2-drmaa,
  python-pathpy, python2-pathpy,
  python-simplegeneric, python2-simplegeneric,
  python-ipython, python2-ipython,
  python-apsw, python2-apsw,
  python-lxml, python2-lxml,
  python-networkx, python2-networkx,
  python-pyzmq, python2-pyzmq,
  python-mccabe, python2-mccabe,
  python-mccabe-0.2.1,
  python-flake8, python2-flake8,
  python-flake8-2.2.4,
  python-mistune, python2-mistune,
  python-ptyprocess, python2-ptyprocess,
  python-llfuse, python2-llfuse,
  python-webob, python2-webob,
  python-xlrd, python2-xlrd,
  python-tables, python2-tables,
  python-pip, python2-pip,
  python-libarchive-c, python2-libarchive-c,
  python-docopt, python2-docopt,
  python-pyrfc3339, python2-pyrfc3339,
  python-configobj, python2-configobj,
  python-clint, python2-clint,
  python-rply, python2-rply,
  python2-rpython,
  python-widgetsnbextension, python2-widgetsnbextension
  jupyter,
  python-jupyter-console, python2-jupyter-console,
  python-hy, python2-hy,
  python-urllib3, python2-urllib3,
  python-rsa, python2-rsa,
  python-tox, python2-tox,
  python2-hypothesis,
  python-paste, python2-paste,
  python-pastescript, python2-pastescript,
  python2-unicodecsv,
  python-pkgconfig, python2-pkgconfig,
  python2-rope,
  python-sqlparse, python2-sqlparse,
  python-gevent, python2-gevent,
  python-tabulate, python2-tabulate,
  python-arrow, python2-arrow,
  python-cleo, python2-cleo,
  python-fake-factory, python2-fake-factory,
  ptpython): Likewise.
* gnu/packages/rdf.scm (python-rdflib, python2-rdflib): Likewise.
* gnu/packages/terminals.scm (asciinema): Likewise.
* gnu/packages/version-control.scm (git-annex-remote-hubic): Likewise.
* gnu/packages/xdisorg.scm (arandr): Likewise.
2016-11-15 22:27:31 +01:00
Ricardo Wurmus 86f4e9d76a
gnu: fftw: Build threads library.
* gnu/packages/algebra.scm (fftw)[arguments]: Add "--enable-threads" to
configure flags.
2016-11-15 22:09:25 +01:00
Hartmut Goebel 5d85493284
gnu: Remove python-setuptools and python2-setuptools from inputs (part 1b)
This patch contains the changes in all modules beside python.scm where
removing setuptools from the inputs could be achieved by removing complete
lines.

* gnu/packages/admin.scm (graphios, thefuck): Remove all [inputs],
  [native-inputs] and [propagated-inputs] where python-setuptools or
  python2-setuptools are the sole entries. Remove python-setuptools and
  python2-setuptools listed on a line by its own from [inputs],
  [native-inputs] and [propagated-inputs].
* gnu/packages/backup.scm (rdiff-backup): Likewise.
* gnu/packages/bioinformatics.scm (htseq, macs, python2-pbcore, rseqc,
  multiqc): Likewise.
* gnu/packages/django.scm (python-django, python2-django,
  python-django-simple-math-captcha, python2-django-simple-math-captcha):
  Likewise.
* gnu/packages/docker.scm (python-docker-py, docker-compose): Likewise.
* gnu/packages/game-development.scm (python-pygame): Likewise.
* gnu/packages/key-mon.scm (key-mon): Likewise.
* gnu/packages/mail.scm (khard): Likewise.
* gnu/packages/music.scm (beets, python2-pyechonest): Likewise.
* gnu/packages/openstack.scm (python-bandit, python2-bandit,
  python-debtcollector, python2-debtcollector,
  python-mox3, python2-mox3,
  python-os-client-config, python2-os-client-config,
  python-oslo.config, python2-oslo.config,
  python-oslo.context, python2-oslo.context,
  python-oslo.i18n, python2-oslo.i18n,
  python-oslo.serialization, python2-oslo.serialization,
  python-oslosphinx, python2-oslosphinx,
  python-oslotest, python2-oslotest,
  python-oslo.utils, python2-oslo.utils,
  python-swiftclient, python2-swiftclient): Likewise.
* gnu/packages/pdf.scm (pdfposter): Likewise.
* gnu/packages/tls.scm (python-acme, python2-acme): Likewise.
2016-11-15 21:58:44 +01:00
Hartmut Goebel f54d6bacbf
gnu: Remove python-setuptools and python2-setuptools from inputs (part 1a)
This patch contains the changes in python.scm where removing setuptools from
the inputs could be achieved by removing complete lines.

* gnu/packages/python.scm (python-psutil, python2-psutil,
  python-py-bcrypt, python2-py-bcrypt,
  python-paramiko, python2-paramiko,
  python-httplib2, python2-httplib2,
  python-ecdsa, python2-ecdsa,
  python-ccm, python2-ccm,
  python2-backport-ssl-match-hostname,
  python-pycrypto, python2-pycrypto,
  python-six, python2-six,
  python-dateutil, python2-dateutil,
  python2-mechanize,
  python-extras, python2-extras,
  python-mimeparse, python2-mimeparse,
  python-nose, python2-nose,
  python-nose2, python2-nose2,
  python-unittest2, python2-unittest2,
  python-py, python2-py,
  python-testresources, python2-testresources,
  python-fixtures-0.3.16,
  python-fixtures, python2-fixtures,
  python-coverage, python2-coverage,
  python-discover, python2-discover,
  python-exif-read, python2-exif-read,
  python-pyld, python2-pyld,
  python-certifi, python2-certifi,
  python-click, python2-click,
  python-vcversioner, python2-vcversioner,
  python-unidecode, python2-unidecode,
  python-pyyaml, python2-pyyaml,
  python-markupsafe, python2-markupsafe,
  python-pystache, python2-pystache,
  python-docutils, python2-docutils,
  python-pygments, python2-pygments,
  python-sphinx-rtd-theme, python2-sphinx-rtd-theme,
  python-blinker, python2-blinker,
  python-rq, python2-rq,
  python-numpy, python2-numpy,
  python-distutils-extra, python2-distutils-extra,
  python2-elib.intl,
  python-pillow, python2-pillow,
  python-xcffib, python2-xcffib,
  python-decorator, python2-decorator,
  python-gridmap, python2-gridmap,
  python-pickleshare, python2-pickleshare,
  python-isodate, python2-isodate,
  python-html5lib, python2-html5lib,
  python2-cssutils,
  python-cssselect, python2-cssselect,
  python-netifaces, python2-netifaces,
  python-sympy, python2-sympy,
  python-testlib, python2-testlib,
  python2-xlib,
  python-singledispatch, python2-singledispatch,
  python-backports-abc, python2-backports-abc,
  python-pep8, python2-pep8,
  python-pyflakes, python2-pyflakes,
  python-fonttools, python2-fonttools,
  python-ly,
  python-appdirs, python2-appdirs,
  python-netaddr, python2-netaddr,
  python-wrapt, python2-wrapt,
  python-iso8601, python2-iso8601,
  python-monotonic, python2-monotonic,
  python-prettytable, python2-prettytable,
  python-pyasn1-modules, python2-pyasn1-modules,
  python-idna, python2-idna,
  python-pretend, python2-pretend,
  python-cryptography-vectors, python2-cryptography-vectors,
  python-cryptography, python2-cryptography,
  python-pyopenssl, python2-pyopenssl,
  python-debian, python2-debian,
  python-chardet, python2-chardet,
  python-zope-event, python2-zope-event,
  python-zope-i18nmessageid, python2-zope-i18nmessageid,
  python-websocket-client, python2-websocket-client,
  python-args, python2-args,
  python-astor, python2-astor,
  python2-functools32,
  python2-futures,
  python2-promise,
  python-colorama, python2-colorama,
  python-pluggy, python2-pluggy,
  python-jmespath, python2-jmespath,
  python-botocore, python2-botocore,
  awscli,
  python-pytest-subtesthack, python2-pytest-subtesthack,
  python-pastedeploy, python2-pastedeploy,
  python-magic, python2-magic,
  python2-s3cmd,
  python2-bz2file,
  python-cysignals, python2-cysignals,
  python-py3status,
  python-tblib, python2-tblib,
  python-greenlet, python2-greenlet,
  python-twisted, python2-twisted,
  python-kazoo, python2-kazoo,
  python-pykafka, python2-pykafka,
  python2-jsonrpclib,
  python-chai, python2-chai,
  python-inflection, python2-inflection,
  python-pylev, python2-pylev,
  python-lazy-object-proxy, python2-lazy-object-proxy,
  python-dnspython, python2-dnspython,
  python-email-validator, python2-email-validator,
  python-ukpostcodeparser, python2-ukpostcodeparser,
  python-pyaml, python2-pyaml,
  python-flexmock, python2-flexmock,
  python-orator, python2-orator,
  python-bleach, python2-bleach,
  python-ipywidgets, python2-ipywidgets,
  python-nbconvert, python2-nbconvert,
  python-nbformat, python2-nbformat,
  python-axolotl-curve25519, python-axolotl2-curve25519,
  python-axolotl, python2-axolotl,
  python-nautilus, python-s3transfer): Remove python-setuptools and
  python2-setuptools from [inputs], [native-inputs] or [propagated-inputs].
  Remove [inputs], [native-inputs] and [propagated-inputs] where
  python-setuptools or python2-setuptools were the sole entry.
2016-11-15 21:54:58 +01:00
ng0 e1b0b8f5b7
gnu: Fix name for ng0.
* gnu/packages/gnupg.scm: Change name in copyright header.
2016-11-15 14:36:58 -05:00
Tobias Geerinckx-Rice bb6e641588
gnu: Add httptunnel.
* gnu/packages/web.scm (httptunnel): New variable.
2016-11-15 20:27:14 +01:00
Ricardo Wurmus 84590149e6
gnu: hisat: Fix typo.
* gnu/packages/bioinformatics.scm (hisat)[arguments]: Fix directory
name in install phase.
2016-11-15 20:21:08 +01:00