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41333 Commits

Author SHA1 Message Date
Carlo Zancanaro ec36339dfd
services: certbot: Add --manual-public-ip-logging-ok for manual challenges 
* gnu/services/certbot.scm (certbot-command): Add
  --manual-public-ip-logging-ok flag to the certbot command when doing a
  manual challenge.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-16 10:22:35 +02:00
Rutger Helling fb6e550d6b
gnu: retroarch: Update to 1.7.8.4. 
* gnu/packages/emulators.scm (retroarch): Update to 1.7.8.4.
 2019-09-16 08:25:04 +02:00
Rutger Helling eca0f3d070
gnu: mgba: Update to 0.7.3. 
* gnu/packages/emulators.scm (mgba): Update to 0.7.3.
 2019-09-16 08:25:04 +02:00
Ricardo Wurmus d80a15696b
gnu: Add r-variancepartition. 
* gnu/packages/bioconductor.scm (r-variancepartition): New variable.
 2019-09-15 22:57:47 +02:00
Ricardo Wurmus 2a360cf6ac
gnu: Add r-wavetiling. 
* gnu/packages/bioconductor.scm (r-wavetiling): New variable.
 2019-09-15 22:54:21 +02:00
Ricardo Wurmus f5349b4d5a
gnu: Add r-genomegraphs. 
* gnu/packages/bioconductor.scm (r-genomegraphs): New variable.
 2019-09-15 22:51:52 +02:00
Ricardo Wurmus 4c63eeb8a4
gnu: Add r-oligo. 
* gnu/packages/bioconductor.scm (r-oligo): New variable.
 2019-09-15 22:50:31 +02:00
Ricardo Wurmus d6a5d9b24f
gnu: Add r-affxparser. 
* gnu/packages/bioconductor.scm (r-affxparser): New variable.
 2019-09-15 22:50:25 +02:00
Ricardo Wurmus df8576e5c9
gnu: Add r-variantfiltering. 
* gnu/packages/bioconductor.scm (r-variantfiltering): New variable.
 2019-09-15 22:41:03 +02:00
Ricardo Wurmus fc3719cc0f
gnu: Add r-shinythemes. 
* gnu/packages/cran.scm (r-shinythemes): New variable.
 2019-09-15 22:40:25 +02:00
Ricardo Wurmus 41b8b05c9e
gnu: Add r-shinytree. 
* gnu/packages/cran.scm (r-shinytree): New variable.
 2019-09-15 22:33:50 +02:00
Ricardo Wurmus 4112ff7e74
gnu: Add js-requirejs. 
* gnu/packages/javascript.scm (js-requirejs): New variable.
 2019-09-15 21:19:53 +02:00
Ricardo Wurmus bb0024dc69
gnu: Add r-reqon. 
* gnu/packages/bioconductor.scm (r-reqon): New variable.
 2019-09-15 21:07:57 +02:00
Ricardo Wurmus e5dfcd8e26
gnu: Add r-seqbias. 
* gnu/packages/bioconductor.scm (r-seqbias): New variable.
 2019-09-15 21:07:56 +02:00
Ricardo Wurmus 12105c6c3a
gnu: Add r-affycoretools. 
* gnu/packages/bioconductor.scm (r-affycoretools): New variable.
 2019-09-15 20:58:26 +02:00
Ricardo Wurmus 01c7ba9982
gnu: Add r-oligoclasses. 
* gnu/packages/bioconductor.scm (r-oligoclasses): New variable.
 2019-09-15 20:58:26 +02:00
Ricardo Wurmus 15184fb386
gnu: Add r-reportingtools. 
* gnu/packages/bioconductor.scm (r-reportingtools): New variable.
 2019-09-15 20:58:25 +02:00
Ricardo Wurmus 83b4209122
gnu: Add r-pfam-db. 
* gnu/packages/bioconductor.scm (r-pfam-db): New variable.
 2019-09-15 20:57:26 +02:00
Ricardo Wurmus 4ca2d6c1a6
gnu: Add r-affycontam. 
* gnu/packages/bioconductor.scm (r-affycontam): New variable.
 2019-09-15 20:53:27 +02:00
Ricardo Wurmus 5094aa9472
gnu: Add r-affycompatible. 
* gnu/packages/bioconductor.scm (r-affycompatible): New variable.
 2019-09-15 20:53:21 +02:00
Ricardo Wurmus 5cf940de21
gnu: Add r-affycomp. 
* gnu/packages/bioconductor.scm (r-affycomp): New variable.
 2019-09-15 20:53:14 +02:00
Ricardo Wurmus 53b1e10f23
gnu: Add r-affydata. 
* gnu/packages/bioconductor.scm (r-affydata): New variable.
 2019-09-15 20:53:01 +02:00
Ricardo Wurmus 853211a51b
gnu: Add r-timeseriesexperiment. 
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): New variable.
 2019-09-15 20:42:41 +02:00
Ricardo Wurmus 739b2d10f0
gnu: Add r-wavcluster. 
* gnu/packages/bioconductor.scm (r-wavcluster): New variable.
 2019-09-15 20:41:01 +02:00
Ricardo Wurmus d77e69e9e1
gnu: r-spam: Update to 2.3-0. 
* gnu/packages/cran.scm (r-spam): Update to 2.3-0.
 2019-09-15 16:15:37 +02:00
Ricardo Wurmus e48e476f41
gnu: r-feather: Update to 0.3.5. 
* gnu/packages/cran.scm (r-feather): Update to 0.3.5.
 2019-09-15 16:15:37 +02:00
Giacomo Leidi 21fc601295
gnu: emacs-zerodark-theme: Update to 4.6. 
* gnu/packages/emacs-xyz.scm (emacs-zerodark-theme): Update to 4.6.
[source]: Update to new source uri.
 2019-09-15 15:29:18 +03:00
Ricardo Wurmus 991c44109f
gnu: Add yubico-pam. 
* gnu/packages/authentication.scm (yubico-pam): New variable.
 2019-09-15 09:28:24 +02:00
Ricardo Wurmus 9eac315069
gnu: r-delayedmatrixstats: Update to 1.6.1. 
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.6.1.
 2019-09-14 23:39:39 +02:00
Ricardo Wurmus 82e343d14a
gnu: r-rhdf5lib: Update to 1.6.1. 
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.6.1.
 2019-09-14 23:39:25 +02:00
Ricardo Wurmus cd25e29616
gnu: r-rtracklayer: Update to 1.44.4. 
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.44.4.
 2019-09-14 23:39:20 +02:00
Ricardo Wurmus 146f0ba5d1
gnu: r-genomicranges: Update to 1.36.1. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.36.1.
 2019-09-14 23:39:12 +02:00
Ricardo Wurmus 7f518ef70b
gnu: r-s4vectors: Update to 0.22.1. 
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.22.1.
 2019-09-14 23:39:08 +02:00
Ricardo Wurmus 11f973e093
gnu: r-mixomics: Update to 6.8.4. 
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.8.4.
 2019-09-14 23:39:03 +02:00
Ricardo Wurmus f8fb5b75c9
gnu: r-gtrellis: Update to 1.16.1. 
* gnu/packages/bioconductor.scm (r-gtrellis): Update to 1.16.1.
 2019-09-14 23:38:58 +02:00
Ricardo Wurmus ec0270b1e9
gnu: r-regioner: Update to 1.16.4. 
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.16.4.
 2019-09-14 23:38:51 +02:00
Björn Höfling cd75c487c8
gnu: Add emacs-elixir-mode. 
* gnu/packages/emacs-xyz.scm (emacs-elixir-mode): New variable.
 2019-09-14 19:44:40 +02:00
Rutger Helling fda8ed0eb1
gnu: wine-staging: Update to 4.16. 
* gnu/packages/wine.scm (wine-staging-patchset-data): Update to 4.16.
* gnu/packages/wine.scm (wine-staging): Update to 4.16.
 2019-09-14 13:01:28 +02:00
Ricardo Wurmus 981dcc3b0c
gnu: r-tidyr: Update to 1.0.0. 
* gnu/packages/statistics.scm (r-tidyr): Update to 1.0.0.
[propagated-inputs]: Add r-ellipsis, r-lifecycle, and r-vctrs.
 2019-09-14 00:37:47 +02:00
Ricardo Wurmus 17f3960f28
gnu: r-diffusionmap: Update to 1.2.0. 
* gnu/packages/graph.scm (r-diffusionmap): Update to 1.2.0.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus fd399b7a83
gnu: r-seqinr: Update to 3.6-1. 
* gnu/packages/cran.scm (r-seqinr): Update to 3.6-1.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus f5b1354fdb
gnu: Add r-lifecycle. 
* gnu/packages/cran.scm (r-lifecycle): New variable.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus cd3ba9c8c7
gnu: r-huge: Update to 1.3.3. 
* gnu/packages/cran.scm (r-huge): Update to 1.3.3.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus ac50956f31
gnu: r-tidytree: Update to 0.2.7. 
* gnu/packages/cran.scm (r-tidytree): Update to 0.2.7.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus aef5e2aadd
gnu: r-activity: Update to 1.3. 
* gnu/packages/cran.scm (r-activity): Update to 1.3.
[propagated-inputs]: Add r-insol.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus d72da21d54
gnu: r-sjplot: Update to 2.7.1. 
* gnu/packages/cran.scm (r-sjplot): Update to 2.7.1.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus 664e15ed8f
gnu: r-sjstats: Update to 0.17.6. 
* gnu/packages/cran.scm (r-sjstats): Update to 0.17.6.
[propagated-inputs]: Add r-parameters.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus 28110e6842
gnu: r-emmeans: Update to 1.4.1. 
* gnu/packages/cran.scm (r-emmeans): Update to 1.4.1.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus 3ab3f7f3bb
gnu: r-sjlabelled: Update to 1.1.1. 
* gnu/packages/cran.scm (r-sjlabelled): Update to 1.1.1.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus 4557f44755
gnu: r-circlize: Update to 0.4.8. 
* gnu/packages/cran.scm (r-circlize): Update to 0.4.8.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus a1f4399438
gnu: r-httpuv: Update to 1.5.2. 
* gnu/packages/cran.scm (r-httpuv): Update to 1.5.2.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus 5ad9da9ab3
gnu: Add r-insol. 
* gnu/packages/cran.scm (r-insol): New variable.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus a0244ef000
gnu: Add r-rgdal. 
* gnu/packages/cran.scm (r-rgdal): New variable.
 2019-09-14 00:37:46 +02:00
Ricardo Wurmus a5a79dd0b8
gnu: Add r-parameters. 
* gnu/packages/cran.scm (r-parameters): New variable.
 2019-09-14 00:37:45 +02:00
Efraim Flashner 18a613fb29
gnu: gnujump: Add desktop file. 
This fixes bug#37069.

* gnu/packages/games.scm (gnujump)[arguments]: Add custom
'create-desktop-entry phase to install a desktop file.
 2019-09-13 17:07:16 +03:00
Efraim Flashner dbb0b06eb4
gnu: tipp10: Fix path in desktop entry. 
* gnu/packages/patches/tipp10-fix-compiling.patch: Remove changes to
hardcode executable path.
 2019-09-13 17:07:13 +03:00
Paul Garlick 0746c33eff
gnu: gmsh: Update home page. 
This addresses a 'guix lint' warning.

* gnu/packages/maths.scm (gmsh)[home-page]: Update to avoid URL
redirection.
 2019-09-13 14:53:57 +01:00
Efraim Flashner f61f424d5b
gnu: mcron: Update to 1.1.2. 
* gnu/packages/guile-xyz.scm (mcron): Update to 1.1.2.
[arguments]: Remove custom 'set-timezone phase.
[native-inputs]: Add autoconf, automake, help2man, texinfo.
[inputs]: Remove ed, which.
 2019-09-13 16:02:31 +03:00
Efraim Flashner f0e149752a
gnu: shellutils.scm: Sort module inputs. 
* gnu/packages/shellutils.scm: Sort module inputs alphabetically.
 2019-09-13 15:39:43 +03:00
Collin J. Doering 8ebd56ea75
gnu: Add zsh-autosuggestions. 
* gnu/packages/shellutils.scm (zsh-autosuggestions): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2019-09-13 15:39:34 +03:00
Collin J. Doering 9c4cb1ef4c
gnu: Add ruby-rspec-wait. 
* gnu/packages/ruby.scm (ruby-rspec-wait): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2019-09-13 15:39:28 +03:00
Collin J. Doering f69f37d54a
gnu: Add sh-z shell tool 
* gnu/packages/shellutils.scm (sh-z): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-13 10:50:11 +02:00
L p R n d n a00a3132c7
gnu: Thunar: Update to 1.8.9. 
* gnu/packages/xfce.scm (thunar): Update to 1.8.9.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-13 10:50:11 +02:00
Ludovic Courtès ba05be2249
gnu: openblas: Set 'NUM_THREADS'. 
Until now, OpenBLAS would use at most the N threads, where N is the
number of cores that happened to be available on the build
machine (typically N=8).

* gnu/packages/maths.scm (openblas/fixed-num-threads): New variable.
(openblas)[replacement]: New field.
(openblas-ilp64): Use 'package/inherit'.
 2019-09-13 10:50:11 +02:00
Ricardo Wurmus 5ad0a45221
gnu: python-matplotlib-documentation: Add missing input. 
* gnu/packages/python-xyz.scm (python-matplotlib-documentation)[native-inputs]:
Add python-sphinx-copybutton.
(python2-matplotlib-documentation)[native-inputs]: Remove
python-sphinx-copybutton.
 2019-09-13 00:44:57 +02:00
Ricardo Wurmus bcb22b3624
gnu: Add python-sphinx-copybutton. 
* gnu/packages/sphinx.scm (python-sphinx-copybutton): New variable.
 2019-09-13 00:44:57 +02:00
Ricardo Wurmus 5ea654cfe0
gnu: python-matplotlib: Update to 3.1.1. 
* gnu/packages/python-xyz.scm (python-matplotlib): Update to 3.1.1.
[native-inputs]: Remove python-nose; add python-pytest and unzip; add
jquery-ui.
[arguments]: Add build phases "fix-and-disable-failing-tests" and
"install-jquery-ui", and move the "check" phase after the "install" phase;
use the default backend in setup.cfg.
(python2-matplotlib): Keep at version 2.2.3.
(python-matplotlib-documentation)[arguments]: Remove "check" phase.
 2019-09-13 00:44:57 +02:00
Wiktor Żelazny 16fddf17f5
gnu: Add r-assertr. 
* gnu/packages/cran.scm (r-assertr): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2019-09-13 00:44:57 +02:00
Brian Leung 86ce3691e1
gnu: emacs-interactive-align: Update to 0.4.2. 
* gnu/packages/emacs-xyz.scm (emacs-interactive-align): Update to 0.4.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-12 23:23:47 +02:00
Tim Gesthuizen 2151e04c1a
gnu: Add emacs-doom-themes. 
* gnu/packages/emacs-xyz.scm (emacs-doom-themes): New variable.

Co-authored-by: Brett Gilio <brettg@posteo.net>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-12 23:22:19 +02:00
Ludovic Courtès d236cd16a7
linux-container: "run-container" scripts shows the container's PID. 
* gnu/build/linux-container.scm (call-with-container): Add
 #:process-spawned-hook and honor it.
* gnu/system/linux-container.scm (container-script)[script]:
Define 'explain' and pass it as #:process-spawned-hook'.
 2019-09-12 23:07:43 +02:00
Ludovic Courtès 3d8424a5ad
services: Fix /usr/bin/env special file target. 
This is a followup to a916215597.

* gnu/services/base.scm (%base-services): Fix "/usr/bin/env" target.
 2019-09-12 23:07:42 +02:00
Ludovic Courtès da966a7a3d
linux-container: Exclude more services when sharing networking with the host. 
* gnu/system/linux-container.scm (containerized-operating-system)[useless-services]:
Add more services to the list when SHARED-NETWORK? is true.
 2019-09-12 23:07:42 +02:00
Ludovic Courtès 5ccec77176
file-systems: Add /var/run/nscd to '%network-file-mappings'. 
This allows containers created by "guix environment -CN" or by
"guix system container -N" to talk to the host nscd.

* gnu/system/file-systems.scm (%network-file-mappings): Add
"/var/run/nscd".
* gnu/build/shepherd.scm (default-mounts)[nscd-socket]: Remove.
* gnu/system/linux-container.scm (container-script)[nscd-run-directory]
[nscd-mapping, nscd-os, nscd-specs]: Remove.
[script]: Filter out from SPECS bind-mounts where the device does not
exist.
* guix/scripts/environment.scm (launch-environment/container)
[optional-mapping->fs]: New procedure.
[mappings]: Remove %NETWORK-FILE-MAPPINGS.
[file-systems]: Add %NETWORK-FILE-MAPPINGS here, filtered through
'optional-mapping->fs'.
 2019-09-12 23:07:42 +02:00
Paul Garlick abed5df777
gnu: gmsh: Fetch source from Git. 
* gnu/packages/maths.scm (gmsh)[source]: Switch to GIT-FETCH.
 2019-09-12 16:21:31 +01:00
Maxim Cournoyer e2fb29b792
gnu: python-pytest-virtualenv: Enable tests. 
* gnu/packages/python-check.scm (python-pytest-virtualenv)
[phases]{patch-virtualenv-executable}: New phase.
[propagated-inputs]: Move python-virtualenv from here...
[inputs]: ...to here.
 2019-09-13 00:10:35 +09:00
Maxim Cournoyer 01a53e0b37
gnu: python-pathpy: Add a missing propagated input. 
This fixes the build of 'python-pytest-shutil', amongst others.

* gnu/packages/python-xyz.scm (python-pathpy)[propagated-inputs]: Add
python-importlib-metadata.
 2019-09-13 00:09:50 +09:00
Tobias Geerinckx-Rice 237d4cf73c
gnu: gfbgraph: Don't use NAME in source URI. 
* gnu/packages/gnome.scm (gfbgraph)[source]: Hard-code NAME.
 2019-09-12 16:16:44 +02:00
Tobias Geerinckx-Rice 7faed56c44
gnu: openconnect: Update to 8.05 [fixes CVE-2019-16239]. 
* gnu/packages/vpn.scm (openconnect): Update to 8.05.
 2019-09-12 16:16:44 +02:00
Ricardo Wurmus 8b35c8cd61
gnu: hypre: Update texlive-union. 
* gnu/packages/maths.scm (hypre)[native-inputs]: Replace texlive-generic-xypic
and texlive-fonts-xypic with texlive-xypic; add texlive-cm to the
texlive-union.
 2019-09-12 12:10:05 +02:00
Ricardo Wurmus 63d57404b3
gnu: texlive-xypic: Install all files. 
Reported by numerobis on the #guix IRC channel.

* gnu/packages/tex.scm (texlive-xypic)[source]: Install "tex/generic/xypic"
files.
[arguments]: Remove #:tex-directory.
 2019-09-12 12:10:05 +02:00
Brian Leung 4913828bb1
gnu: python-language-server: Update to 0.28.3-1.c3cab77. 
* gnu/packages/python-xyz.scm (python-language-server): Update to 0.28.3-1.c3cab77.

Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
 2019-09-12 09:47:48 +09:00
Ricardo Wurmus 412153bbaf
gnu: r-bsgenome-celegans-ucsc-ce6: Permit substitution. 
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6)[arguments]:
Remove field.
 2019-09-11 23:59:28 +02:00
Ricardo Wurmus 86ced7b271
gnu: r-bsgenome-celegans-ucsc-ce6: Use bioconductor-uri. 
* gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6)[source]: Use
BIOCONDUCTOR-URI.
 2019-09-11 23:58:52 +02:00
Ricardo Wurmus 0f272518ec
gnu: python-ipython-documentation: Make reproducible. 
Fixes <https://bugs.gnu.org/37373/>.

* gnu/packages/python-xyz.scm (python-ipython)[arguments]: Add phase
"make-docs-reproducible" to remove timestamps from documentation generated in
dependent python-ipython-documentation package.
 2019-09-11 23:30:49 +02:00
Tobias Geerinckx-Rice 6f2f7bc88a
gnu: recode: Don't use NAME in source URI. 
* gnu/packages/textutils.scm (recode)[source]: Hard-code NAME.
 2019-09-11 22:56:04 +02:00
Tobias Geerinckx-Rice 5ca1900ba5
gnu: recode: Update to 3.7.5. 
* gnu/packages/textutils.scm (recode): Update to 3.7.5.
[native-inputs]: Use python@3 and python-cython@3.
 2019-09-11 22:56:04 +02:00
Tobias Geerinckx-Rice 3b14974706
gnu: glslang: Use GIT-FILE-NAME. 
* gnu/packages/vulkan.scm (glslang)[source]: Use GIT-FILE-NAME.
 2019-09-11 22:56:04 +02:00
Tobias Geerinckx-Rice 97e53dccc0
gnu: nghttp2: Don't use NAME in source URI. 
* gnu/packages/web.scm (nghttp2)[source]: Hard-code NAME.
 2019-09-11 22:56:04 +02:00
Tobias Geerinckx-Rice bfebc73a74
gnu: neofetch: Update to 6.1.0. 
* gnu/packages/admin.scm (neofetch): Update to 6.1.0.
 2019-09-11 22:56:04 +02:00
Rutger Helling e8cfac22c7
gnu: youtube-dl: Update to 2019.09.12. 
* gnu/packages/video.scm (youtube-dl): Update to 2019.09.12.
 2019-09-11 21:03:02 +02:00
Tobias Geerinckx-Rice cf065aba1e
gnu: openssl: Update to 1.1.1d [fix CVE-2019-{1547,1549,1552,1563}]. 
* gnu/packages/tls.scm (openssl-next): Update to 1.1.1d.
 2019-09-11 18:30:22 +02:00
宋文武 5df412bfe6
services: libvirtd: Use '/run/current-system/profile/bin' as PATH. 
This is a followup to ef640db2f5.

* gnu/services/virtualization.scm (libvirt-shepherd-service): Set
'#:environment-variables' for 'make-forkexec-constructor'.
 2019-09-11 23:12:02 +08:00
Tobias Geerinckx-Rice ae9b6dba19
gnu: foo2zjs: Update to 20190909. 
* gnu/packages/cups.scm (foo2zjs): Update to 20190909.
 2019-09-11 16:30:15 +02:00
Maxim Cournoyer d1c9684753
gnu: workrave: Correct the types of inputs used. 
* gnu/packages/gnome.scm (workrave)[propagated-inputs]: Move them all to...
[inputs]: ...here.
[native-inputs]: Move libxscrnsaver to the 'inputs' field.
 2019-09-11 22:07:13 +09:00
Maxim Cournoyer aa51d92cdb
gnu: workrave: Update to version 1.10.34. 
* gnu/packages/gnome.scm (workrave): Update version and hash strings.
[inputs]: Remove python-cheetah.
[native-inputs]: Add boost, python-3 and python-jinja2; remove the "bin"
output of glib.
 2019-09-11 22:07:12 +09:00
Ludovic Courtès 7dc4b2a728
gnu: emacs-debbugs: Update to 0.19. 
* gnu/packages/emacs-xyz.scm (emacs-debbugs): Update to 0.19.
 2019-09-11 14:44:15 +02:00
Ludovic Courtès 373546123e
gnu: emacs-smart-mode-line: Update to 2.13. 
* gnu/packages/emacs-xyz.scm (emacs-smart-mode-line): Update to 2.13.
 2019-09-11 14:43:57 +02:00
Ludovic Courtès 28123c01d1
gnu: guile-json: Use "mirror://savannah" URL. 
* gnu/packages/guile.scm (guile-json, guile-json-3): Change URL to
mirror://savannah.
 2019-09-11 14:08:34 +02:00
Ludovic Courtès 4e0299194d
gnu: guile-json: Update to 3.2.0. 
* gnu/packages/guile.scm (guile-json-3): Update to 3.2.0.
 2019-09-11 14:08:34 +02:00
Ludovic Courtès 9abc58d3ef
gnu: guile-gcrypt: Update to 0.2.0. 
* gnu/packages/gnupg.scm (guile-gcrypt): Update to 0.2.0.
 2019-09-11 14:08:33 +02:00
宋文武 ef640db2f5
gnu: libvirt: Don't wrap with PATH. 
This reverts commit 903e051a71 to fix
<https://bugs.gnu.org/31365>.  The full path of the 'ip' command is already
embedded, and we want to search 'qemu' in PATH.

* gnu/packages/virtualization.scm (libvirt): Remove 'wrap-libvirtd phase.  Add
configure flags to run qemu as 'nobody:kvm'.
* gnu/services/virtualization.scm (libvirt-service-type): Add 'qemu' to the
system profile.
 2019-09-11 19:15:30 +08:00
Maxim Cournoyer e135ef9686
gnu: emacs-elpy: Update to 1.31.0. 
* gnu/packages/emacs-xyz.scm (emacs-elpy): Update to 1.31.0.
 2019-09-11 18:10:21 +09:00
Maxim Cournoyer 296e1aea65
gnu: python-jedi: Update to 0.15.1 and re-enable tests. 
* gnu/packages/python-xyz.scm (python-jedi): Update to 0.15.1; re-enable
tests.
 2019-09-11 18:10:20 +09:00
Maxim Cournoyer 4eb97c254e
gnu: python-parso: Run the test suite. 
* gnu/packages/python-xyz.scm (python-parso)[phases]: Replace the check phase.
 2019-09-11 18:10:20 +09:00
Maxim Cournoyer 1475094a45
gnu: python-parso: Update to 0.5.1. 
* gnu/packages/python-xyz.scm (python-parso): Update to 0.5.1.
 2019-09-11 18:10:20 +09:00
Steve Sprang 2316ce5187
gnu: Add openscad. 
* gnu/packages/engineering.scm (openscad): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2019-09-11 12:07:54 +03:00
Rutger Helling f8b7c35ad0
gnu: nftables: Update to 0.9.2. 
* gnu/packages/linux.scm (nftables): Update to 0.9.2.
 2019-09-11 10:21:55 +02:00
Rutger Helling c5e3f4f043
gnu: libnftnl: Update to 1.1.4. 
* gnu/packages/linux.scm (libnftnl): Update to 1.1.4.
 2019-09-11 10:21:55 +02:00
Tobias Geerinckx-Rice c1b79b3652
gnu: libsoup: Don't use NAME in source URI. 
* gnu/packages/gnome.scm (libsoup)[source]: Hard-code NAME.
 2019-09-11 00:33:51 +02:00
Tobias Geerinckx-Rice b5b0fd2354
gnu: tracker: Don't use NAME in source URI. 
* gnu/packages/gnome.scm (tracker)[source]: Hard-code NAME.
 2019-09-11 00:33:51 +02:00
Tobias Geerinckx-Rice 1d68eb321f
gnu: gvfs: Don't use NAME in source URI. 
* gnu/packages/gnome.scm (gvfs)[source]: Hard-code NAME.
 2019-09-11 00:33:50 +02:00
Tobias Geerinckx-Rice abab956bfc
gnu: umockdev: Update to 0.13.2. 
* gnu/packages/check.scm (umockdev): Update to 0.13.2.
 2019-09-11 00:33:50 +02:00
Tobias Geerinckx-Rice 886534b4e0
gnu: yoshimi: Update to 1.6.0.1. 
* gnu/packages/music.scm (yoshimi): Update to 1.6.0.1.
 2019-09-11 00:33:50 +02:00
Tobias Geerinckx-Rice 0edfe55332
gnu: perl-archive-zip: Update to 1.65. 
* gnu/packages/perl-compression.scm (perl-archive-zip): Update to 1.65.
 2019-09-11 00:33:50 +02:00
Tobias Geerinckx-Rice 8e42b087f0
gnu: haveged: Use @acronym in description. 
* gnu/packages/linux.scm (havege)[description]: Substitute @acronym
for @dfn mark-up.
 2019-09-11 00:33:50 +02:00
Tobias Geerinckx-Rice 6664ec0c8a
gnu: haveged: Use HTTPS home page. 
* gnu/packages/linux.scm (haveged)[home-page]: Use HTTPS.
 2019-09-11 00:33:50 +02:00
Tobias Geerinckx-Rice 389cae8b07
gnu: haveged: Update to 1.9.6. 
* gnu/packages/linux.scm (haveged): Update to 1.9.6.
 2019-09-11 00:33:50 +02:00
Brian Leung eb7ce870e0
gnu: emacs-helm-company: Update to 0.2.5. 
* gnu/packages/emacs-xyz.scm (emacs-helm-company): Update to 0.2.5.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-11 00:09:39 +02:00
Steve Sprang c3c0eda646
gnu: Add opencsg. 
* gnu/packages/graphics.scm (opencsg): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-11 00:09:39 +02:00
Brian Leung 984cabc4a6
gnu: python-language-server: Update to 0.28.1. 
* gnu/packages/python-xyz.scm (python-language-server): Update to 0.28.1.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-11 00:09:39 +02:00
Ludovic Courtès 489d16577e
gnu: cmake: Add package variant that knows about X.509 certificates. 
Fixes <https://bugs.gnu.org/37371>.

* gnu/packages/patches/cmake-curl-certificates.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cmake.scm (cmake/fixed): New variable.
 2019-09-11 00:09:39 +02:00
Tobias Geerinckx-Rice 7e143375d3
gnu: links: Update to 2.20.1 [security fix for tor users]. 
* gnu/packages/web-browsers.scm (links): Update to 2.20.1.
 2019-09-10 23:01:25 +02:00
Tobias Geerinckx-Rice 08dd5f673d
gnu: strongswan: Update to 5.8.1. 
* gnu/packages/networking.scm (strongswan): Update to 5.8.1.
 2019-09-10 21:51:11 +02:00
Tobias Geerinckx-Rice db05b57205
gnu: youtube-dl: Update to 2019.09.01. 
* gnu/packages/video.scm (youtube-dl): Update to 2019.09.01.
 2019-09-10 21:38:55 +02:00
Tobias Geerinckx-Rice 97e036cac1
gnu: i3blocks: Update to 1.5. 
* gnu/packages/wm.scm (i3blocks): Update to 1.5.
[source]: Use git tag.
[arguments]: Remove entirely.
 2019-09-10 21:37:19 +02:00
Tobias Geerinckx-Rice 07c0110eac
gnu: weechat: Update to 2.6. 
* gnu/packages/irc.scm (weechat): Update to 2.6.
[source]: Remove obsolete patch.
[inputs]: Replace python-2 with python(@3).
[arguments]: Remove ‘wrap’ phase.
* gnu/packages/patches/weechat-python.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2019-09-10 21:37:19 +02:00
Timothy Sample 83aa656217
gnu: ghc@8.6: Add missing 'native-search-paths'. 
Fixes <https://bugs.gnu.org/37064>.

* gnu/packages/haskell.scm (ghc-8.6)[native-search-paths]: Set search
paths explicitly instead of inheriting them.
 2019-09-09 21:21:00 -04:00
Tobias Geerinckx-Rice e9c784fba1
gnu: rclone: Update to 1.49.2. 
* gnu/packages/sync.scm (rclone): Update to 1.49.2.
 2019-09-10 02:18:04 +02:00
Tobias Geerinckx-Rice ae1bab3e95
gnu: fakeroot: Update to 1.24. 
* gnu/packages/linux.scm (fakeroot): Update to 1.24.
[source]: Adjust and use HTTPS.
 2019-09-10 02:18:04 +02:00
Tobias Geerinckx-Rice 9a5f35fe05
gnu: eclib: Update to 20190909. 
* gnu/packages/algebra.scm (eclib): Update to 20190909.
 2019-09-10 02:18:04 +02:00
Tobias Geerinckx-Rice 36ed9b4678
gnu: aisleriot: Update to 3.22.9. 
* gnu/packages/gnome.scm (aisleriot): Update to 3.22.9.
 2019-09-10 02:18:04 +02:00
Guillaume Le Vaillant deb083628f
gnu: monero-gui: Update to 0.14.1.2. 
* gnu/packages/finance.scm (monero-gui): Update to 0.14.1.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-10 00:34:41 +02:00
Guillaume Le Vaillant b7a07bbd5e
gnu: monero: Activate Trezor support. 
* gnu/packages/finance.scm (monero):
  [native-inputs]: Add python and protobuf.
  [inputs]: Add libusb and protobuf.
  [arguments]: Add delete-dead-links phase.
  (monero-gui)[inputs]: Add libusb and protobuf.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-10 00:34:41 +02:00
Guillaume Le Vaillant 44554d86da
gnu: monero: Fix detection of readline library. 
* gnu/packages/finance.scm (monero)[arguments]: Define 'Readline_ROOT_DIR'
  in 'configure-flags'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-10 00:34:41 +02:00
L p R n d n c0c0e9b836
gnu: Add copyright header. 
* gnu/packages/xfce.scm: Add copyright header.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-10 00:34:41 +02:00
L p R n d n c629b99e3b
gnu: orage: Fix build. 
* gnu/packages/xfce.scm (orage)[arguments]: Add phase fixing build with libical3.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-10 00:34:41 +02:00
L p R n d n b82cf9644a
gnu: ristretto: Update to 0.10.0. 
* gnu/packages/xfce.scm (ristretto): Update to 0.10.0.
[inputs] Add gtk+. Remove gtk+-2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-10 00:34:41 +02:00
L p R n d n 3551f305c4
gnu: mousepad: Update to 0.4.2. 
* gnu/packages/xfce.scm (mousepad): Update to 0.4.2.
[arguments] Remove unnecessary --enable-gtk3 flag from #:configure-flags.
[inputs] Add xfconf.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2019-09-10 00:34:41 +02:00
Tobias Geerinckx-Rice 5fbba84696
gnu: zeromq: Use HTTPS home page. 
* gnu/packages/networking.scm (zeromq)[home-page]: Use HTTPS.
 2019-09-09 23:17:52 +02:00
Tobias Geerinckx-Rice 3053feab0a
gnu: zeromq: Update to 4.3.2. 
* gnu/packages/networking.scm (zeromq): Update to 4.3.2.
[source]: Download GitHub release tarball.
 2019-09-09 23:17:51 +02:00
Tobias Geerinckx-Rice ddaefa2202
gnu: libmbim: Update to 1.20.0. 
* gnu/packages/freedesktop.scm (libmbim): Update to 1.20.0.
 2019-09-09 23:17:51 +02:00
Tobias Geerinckx-Rice 351c804217
gnu: libmbim: Don't use NAME in source URI. 
* gnu/packages/freedesktop.scm (libmbim)[source]: Hard-code NAME.
 2019-09-09 23:17:51 +02:00
Tobias Geerinckx-Rice b243d2f7d3
gnu: libsecret: Update to 0.19.1. 
* gnu/packages/gnome.scm (libsecret): Update to 0.19.1.
 2019-09-09 23:17:51 +02:00
Tobias Geerinckx-Rice 0ada4e2987
gnu: libsecret: Don't use NAME in source URI. 
* gnu/packages/gnome.scm (libsecret)[source]: Hard-code NAME.
 2019-09-09 23:17:51 +02:00
Jan Nieuwenhuizen 0b95b19b1d
gnu: mes: Update to 0.20. 
* gnu/packages/mes.scm (mes): Update to 0.20.  Use nyacc-0.99.0.
 2019-09-09 22:57:27 +02:00
Jan Nieuwenhuizen 9aed1de3e9
gnu: mescc-tools: Update to 0.6.1. 
* gnu/packages/mes.scm (mescc-tools): Update to 0.6.1.
 2019-09-09 22:57:27 +02:00
Jan Nieuwenhuizen 86c3a50646
gnu: nyacc: Update to 0.99.0. 
* gnu/packages/mes.scm (nyacc): Update to 0.99.0.
 2019-09-09 22:57:26 +02:00
Nicolas Goaziou 695ee52eb5
gnu: grammalecte: Update to 1.4.0. 
* gnu/packages/dictionaries.scm (grammalecte): Update to 1.4.0.
[synopsis]: Remove spurious space.
 2019-09-09 22:19:01 +02:00
Robert Vollmert d9e3a21318
gnu: Add scron. 
* gnu/packages/suckless.scm (scron): New package.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2019-09-09 21:53:26 +08:00