Commit Graph

10539 Commits

Author SHA1 Message Date
David Craven 37d52f6e46
gnu: spice: Fix usbredir for 32 bit platforms.
* gnu/packages/spice.scm (usbredir)[origin]: Fetch source from git repo.
  [native-inputs]: Add AUTOCONF, AUTOMAKE and LIBTOOL.
  [arguments]: Add autogen phase.
2016-08-13 14:02:56 +02:00
Jan Nieuwenhuizen 19c3304072
gnu: Add xlsx2csv.
* gnu/packages/xml.scm (xlsx2csv): New variable.

Signed-off-by: Ben Woodcroft <donttrustben@gmail.com>
2016-08-13 20:12:07 +10:00
Vincent Legoll ce728f70e5
gnu: Add Musl.
* gnu/packages/musl.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2016-08-13 11:31:39 +02:00
Ricardo Wurmus 2f82b53b94
gnu: Add virt-manager.
* gnu/packages/qemu.scm (virt-manager): New variable.
2016-08-12 21:04:20 +02:00
Ricardo Wurmus 7cd2032f24
gnu: Add python-libvirt.
* gnu/packages/qemu.scm (python-libvirt, python2-libvirt): New
  variables.
2016-08-12 21:04:20 +02:00
Ricardo Wurmus 597ea1223b
gnu: Add libvirt-glib.
* gnu/packages/qemu.scm (libvirt-glib): New variable.
2016-08-12 21:04:19 +02:00
Ricardo Wurmus a0f6c3b35d
gnu: Add libosinfo.
* gnu/packages/qemu.scm (libosinfo): New variable.
2016-08-12 21:04:19 +02:00
Ricardo Wurmus 309693e040
gnu: Add libvirt.
* gnu/packages/qemu.scm (libvirt): New variable.
2016-08-12 21:04:15 +02:00
ng0 b3885778e8
gnu: Add stagit.
* gnu/packages/version-control.scm (stagit): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-12 14:11:51 -04:00
ng0 b227f0be89
gnu: Add python-stem.
* gnu/packages/python.scm (python-stem, python2-stem): New variables.

Co-authored-by: Leo Famulari <leo@famulari.name>
2016-08-12 13:56:17 -04:00
宋文武 939111ca9e
gnu: st: Remove unnecessary inputs.
* gnu/packages/suckless.scm (st)[inputs]: Remove libxcomposite,
compositeproto, xextproto, libxrender and font-liberation.
2016-08-12 22:29:50 +08:00
ng0 87520dfd4b
gnu: st: Update to 0.7.
* gnu/packages/suckless.scm (st): Update to 0.7.
(inputs): Remove libxext.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-08-12 22:22:43 +08:00
Leo Famulari 0d4b5eb1fd
gnu: diffoscope: Update to 56.
* gnu/packages/package-management.scm (diffoscope): Update to 56.
2016-08-12 01:55:47 -04:00
Leo Famulari 2b895f6980
gnu: postgresql: Update to 9.5.4 [fixes CVE-2016-{5423,5424}].
* gnu/packages/databases.scm (postgresql): Update to 9.5.4.
2016-08-12 01:46:35 -04:00
Efraim Flashner b92f651be8
gnu: python-cython: Use 'modify-phases'.
* gnu/packages/python.scm (python-cython)[arguments]: Use 'modify-phases'.
2016-08-11 22:44:07 +03:00
Efraim Flashner dd22efef0a
gnu: python-cython: Update to 0.24.1.
* gnu/packages/python.scm (python-cython): Update to 0.24.1.
2016-08-11 22:44:07 +03:00
Efraim Flashner 3e6fdd5f8a
gnu: snap-aligner: Limit to x86_64.
* gnu/packages/bioinformatics.scm (snap-aligner)[supported-systems]: Add
note explaining why we build for x86_64 only.
2016-08-11 22:44:07 +03:00
Jelle Licht f2b4c18cd9
gnu: jq: Fix CVE-2015-8863.
* gnu/packages/patches/jq-CVE-2015-8863.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/web.scm (jq)[source]: Use it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-11 15:42:32 -04:00
ng0 e08ca4b966
gnu: Add emacs-neotree.
* gnu/packages/emacs.scm (emacs-neotree): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-11 18:12:41 +03:00
ng0 e4eb213473
gnu: Add sic.
* gnu/packages/irc.scm (sic): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-11 18:12:41 +03:00
ng0 dfde065fd2
gnu: dwm: Shorten the description.
* gnu/packages/suckless.scm (dwm)[description]: Shorten.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-11 18:12:41 +03:00
Troy Sankey caa6fc89c7
gnu: python2-notmuch: Update to 0.22.1.
* gnu/packages/mail.scm (python2-notmuch): Update to 0.22.1 by
inheriting from 'python-notmuch'.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-11 18:12:41 +03:00
Troy Sankey 4b6909bc03
gnu: Add python-notmuch.
* gnu/packages/mail.scm (python-notmuch): New variable.

Co-authored-by: Alex Kost <alezost@gmail.com>
2016-08-11 18:12:41 +03:00
Alex Kost 2c5b91dc47
gnu: notmuch: Use 'emacs-minimal' instead of 'emacs'.
* gnu/packages/mail.scm (notmuch)[inputs]: Remove 'emacs'.
[native-inputs]: Add 'emacs-minimal'.
2016-08-11 18:12:41 +03:00
Troy Sankey 25a78dbc7a
gnu: notmuch: Update to 0.22.1.
* gnu/packages/mail.scm (notmuch): Update to 0.22.1.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-11 18:12:41 +03:00
Jan Nieuwenhuizen b3de5ff221
gnu: Add laby.
* gnu/packages/patches/laby-make-install.patch: New file.
* gnu/local.mk (dist_patch_DATA): gnu-system.am: Add it.
* gnu/packages/games.scm (laby): New variable.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-08-11 19:45:22 +08:00
Ben Woodcroft 7024aeaaaa
gnu: diamond: Update to 0.8.18.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.18.
2016-08-11 20:39:54 +10:00
Efraim Flashner 91c52629e8
gnu: corkscrew: Use 'modify-phases'.
* gnu/packages/ssh.scm (corkscrew)[arguments]: Use 'modify-phases'.
2016-08-11 13:20:19 +03:00
Efraim Flashner 0ec60d6e03
gnu: mosh: Update to 1.2.6.
* gnu/packages/ssh.scm (mosh): Update to 1.2.6.
2016-08-11 13:20:18 +03:00
Efraim Flashner 11379192fa
gnu: mosh: Use 'modify-phases'.
* gnu/packages/ssh.scm (mosh)[arguments]: Use 'modify-phases'.
2016-08-11 13:20:18 +03:00
Efraim Flashner c3671282c1
gnu: mosh: Update source location.
* gnu/packages/ssh.scm (mosh)[source]: Download from homepage.
[home-page]: Old url redirects to https://mosh.org.
2016-08-11 13:20:17 +03:00
Efraim Flashner 3dbdfdc7f0
gnu: mpv: Update to 0.18.1.
* gnu/packages/video.scm (mpv): Update to 0.18.1.
2016-08-11 13:20:17 +03:00
Efraim Flashner 91b2296b9c
gnu: obs: Update to 0.15.4.
* gnu/packages/video.scm (obs): Update to 0.15.4.
2016-08-11 13:20:16 +03:00
Efraim Flashner cd36a4117b
gnu: ffmpeg: Update to 3.1.2.
* gnu/packages/video.scm (ffmpeg): Update to 3.1.2.
2016-08-11 13:20:16 +03:00
Efraim Flashner f9c646886a
gnu: freeimpi: Update to 1.5.3.
* gnu/packages/freeipmi.scm (freeipmi): Update to 1.5.3.
2016-08-11 13:20:16 +03:00
Efraim Flashner f64b989b1b
gnu: dico: Update to 2.3.
* gnu/packages/dico.scm (dico): Update to 2.3.
[inputs]: Add python-2, groff. Upgrade readline-6.2 to latest.
[source]: Remove patches.
* gnu/packages/patches/dico-idxcide-bug.patch,
* gnu/packages/patches/dico-libtool-deterministic.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2016-08-11 13:20:12 +03:00
Mark H Weaver 10692b2e7f
gnu: linux-libre@4.4: Update to 4.4.17.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.17.
2016-08-11 05:21:33 -04:00
Alex Griffin 2ebc5ad603
gnu: gnome-mpv: Update to 0.10.
* gnu/packages/video.scm (gnome-mpv): Update to 0.10.
2016-08-11 09:26:55 +02:00
Mark H Weaver 7309a501ee
gnu: linux-libre@4.1: Update to 4.1.30.
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.30.
2016-08-10 23:13:21 -04:00
ng0 5ec8b02d10
gnu: Add cbatticon.
* gnu/packages/admin.scm (cbatticon): New variable.
2016-08-10 22:39:14 +02:00
Ricardo Wurmus dd05e73102
gnu: nautilus: Add gvfs support.
* gnu/packages/gnome.scm (nautilus)[inputs]: Add gvfs.
2016-08-10 15:47:09 +02:00
Efraim Flashner 5d923b4f4a
gnu: font-xfree86-type1: Add missing input.
* gnu/packages/xorg.scm (font-xfree86-type1)[inputs]: Add mkfontscale.
2016-08-10 15:59:26 +03:00
Efraim Flashner 881d863102
gnu: font-misc-ethiopic: Add missing input.
* gnu/packages/xorg.scm (font-misc-ethiopic)[inputs]: Add mkfontscale.
2016-08-10 15:57:21 +03:00
Efraim Flashner 4dd0a8b601
gnu: qt: Don't build examples.
* gnu/packages/qt.scm (qt)[arguments]: Add flag to not build the examples.
2016-08-10 12:11:55 +03:00
Efraim Flashner daa9a9108d
gnu: openbox: Update source location.
* gnu/packages/openbox.scm (openbox)[source]: Download from openbox.org.
2016-08-10 12:11:55 +03:00
Efraim Flashner 6582ecee53
gnu: openbox: Fix autostart.
* gnu/packages/openbox.scm (openbox)[inputs]: Add python2.
[propagated-inputs]: Add python2-pyxdg.
2016-08-10 12:11:55 +03:00
Ben Woodcroft f8744816e6
gnu: ruby-arel: Update to 7.1.1.
* gnu/packages/ruby.scm (ruby-arel): Update to 7.1.1.
2016-08-10 15:36:33 +10:00
Ben Woodcroft 1b10724550
gnu: ruby-simplecov: Update to 0.12.0.
* gnu/packages/ruby.scm (ruby-simplecov): Update to 0.12.0.
2016-08-10 15:36:33 +10:00
Ben Woodcroft 44514637ca
gnu: ruby-gherkin3: Rename to ruby-gherkin and update to 4.0.0.
* gnu/packages/ruby.scm (ruby-gherkin3): Rename to ruby-gherkin and update to
4.0.0.
(ruby-cucumber-core)[propagated-inputs]: Adjust accordingly.
2016-08-10 15:36:33 +10:00
Ben Woodcroft 29f49403a9
gnu: ruby-spring: Update to 1.7.2.
* gnu/packages/rails.scm (ruby-spring): Update to 1.7.2.
2016-08-10 15:36:33 +10:00
Ben Woodcroft 2d9f1c06b5
gnu: ruby-rspec: Update to 3.5.0.
These packages should be updated together.

* gnu/packages/ruby.scm (ruby-rspec): Update to 3.5.0.
(ruby-rspec-core): Update to 3.5.0.
(ruby-rspec-mocks): Update to 3.5.0.
(ruby-rspec-expectation): Update to 3.5.1.
(ruby-rspec-support): Update to 3.5.0.
2016-08-10 15:36:33 +10:00
Ben Woodcroft 1db791d5f4
gnu: ruby-rack: Update to 2.0.1.
* gnu/packages/ruby.scm (ruby-rack): Update to 2.0.1.
[source]: Use GitHub and patch.
[native-inputs]: Add ruby-concurrent, ruby-minitest, ruby-minitest-sprint,
which.  Remove ruby-bacon.
[propagated-inputs]: Add ruby-concurrent.
* gnu/packages/patches/ruby-rack-ignore-failing-test.patch: New file.
* gnu/local.mk: Add it.
2016-08-10 15:36:33 +10:00
Ben Woodcroft 9019b37fb7
gnu: ruby-concurrent: Remove dependencies.
ruby-timecop and ruby-yard will links in a circular dependency chain after
ruby-rack is updated.

* gnu/packages/ruby.scm (ruby-concurrent)[arguments]: Remove
timecop-dependent tests.
[native-inputs]: Remove ruby-timecop, ruby-yard.
2016-08-10 15:36:33 +10:00
Ben Woodcroft 2af45e5025
gnu: ruby-activesupport: Update to 5.0.0.
* gnu/packages/ruby.scm (ruby-activesupport): Update to 5.0.0.
[arguments]: Include the library as a test.
[propagated-inputs]: Add ruby-concurrent.  Remove ruby-thread-safe,
ruby-json.
2016-08-10 15:36:33 +10:00
Ben Woodcroft 3840373b39
gnu: ruby-puma: Update to 3.6.0.
* gnu/packages/ruby.scm (ruby-puma): Update to 3.6.0.
[arguments]: Add 'delete-integration-tests' phase.
(gnu/packages/patches/ruby-puma-ignore-broken-test.patch):
Remove only one broken test.
2016-08-10 15:36:33 +10:00
Leo Famulari 10fa1d98e1
gnu: mpd: Update to 0.19.18.
* gnu/packages/mpd.scm (mpd): Update to 0.19.18.
2016-08-09 21:08:06 -04:00
Tomáš Čech ba6d25f3b9
gnu: bash-completion: Update to 2.3. Update the patch.
* gnu/packages/bash.scm (bash-completion): Update to 2.3.
* gnu/packages/patches/bash-completion-directories.patch: New version of
  the patch for the same purpose.
2016-08-09 09:23:38 +02:00
Tomáš Čech aa67d3c546
gnu: bash-completion: Modify to modify-phases.
* gnu/packages/bash.scm (bash-completion): Use modify-phases instead of
  alist-cons-after.
2016-08-09 09:23:35 +02:00
Danny Milosavljevic cccb4d2652
gnu: Add perl-crypt-openssl-random.
* gnu/packages/tls.scm (perl-crypt-openssl-random): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:39 -04:00
Danny Milosavljevic e818f321fd
gnu: Add perl-io-socket-inet6.
* gnu/packages/networking.scm (perl-io-socket-inet6): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:39 -04:00
Danny Milosavljevic be0c57338a
gnu: Add perl-mail-spf.
* gnu/package/mail.scm (perl-mail-spf): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:39 -04:00
Danny Milosavljevic adff71ca5c
gnu: Add perl-crypt-openssl-bignum.
* gnu/packages/tls.scm (perl-crypt-openssl-bignum, perl-crypt-arguments): New
variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:39 -04:00
Danny Milosavljevic 4532c0c0ab
gnu: Add perl-crypt-openssl-rsa.
* gnu/packages/tls.scm (perl-crypt-openssl-rsa): Add variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:38 -04:00
Danny Milosavljevic e741c4e424
gnu: Add perl-geo-ip.
* gnu/packages/networking.scm (perl-geo-ip): Add variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:38 -04:00
Danny Milosavljevic b09a8b6f63
gnu: Add perl-net-cidr-lite.
* gnu/packages/networking.scm (perl-net-cidr-lite): Add variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:38 -04:00
Danny Milosavljevic 22414177cd
gnu: Add perl-encode-detect.
* gnu/packages/perl.scm (perl-encode-detect): Add variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:38 -04:00
Danny Milosavljevic 7ad2bd50f8
gnu: Add perl-test-trailingspace.
* gnu/packages/perl.scm (perl-test-trailingspace): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:37 -04:00
Danny Milosavljevic 831fee8765
gnu: Add perl-file-find-object-rule.
* gnu/packages/perl.scm (perl-file-find-object-rule): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:37 -04:00
Leo Famulari 4ec4aa4fc9
gnu: Add perl-file-find-object.
* gnu/packages/perl.scm (perl-file-find-object): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:37 -04:00
Danny Milosavljevic 3ed361ea09
gnu: Add perl-net-patricia.
* gnu/packages/networking.scm (perl-net-patricia): Add variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:37 -04:00
Danny Milosavljevic 1201eab9c4
gnu: Add perl-netaddr-ip.
* gnu/packages/networking.scm (perl-netaddr-ip): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:36 -04:00
Danny Milosavljevic 8d60dd7174
gnu: Add perl-net-dns-resolver-programmable.
* gnu/packages/networking.scm (perl-net-dns-resolver-programmable): New variable.
* gnu/packages/patches/perl-net-dns-resolver-programmable-Fix-broken-interface.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:36 -04:00
Danny Milosavljevic 87b1409140
gnu: Add perl-socket6.
* gnu/packages/networking.scm (perl-socket6): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:36 -04:00
Danny Milosavljevic 68b14f2e15
gnu: Add perl-net-dns.
* gnu/packages/networking.scm (perl-net-dns): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 22:36:36 -04:00
Leo Famulari 6b5e654dd4
gnu: fontconfig: Fix CVE-2016-5384.
* gnu/packages/fontutils.scm (fontconfig)[replacement]: New field.
(fontconfig/fixed): New variable.
* gnu/packages/patches/fontconfig-CVE-2016-5384.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-08-08 20:33:21 -04:00
8p8c ed6ba9cc7b
gnu: recordmydesktop: Add ALSA support.
* gnu/packages/video.scm (recordmydesktop)[inputs]: Add ALSA-LIB

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 16:03:32 -04:00
Mathieu Lirzin 751f687175
gnu: Add tint2.
* gnu/packages/xdisorg.scm (tint2): New variable.
2016-08-08 21:58:02 +02:00
Jan Nieuwenhuizen 763b3d50b6
gnu: Add mono.
* gnu/packages/mono.scm: New file.
* gnu/packages/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-08 14:27:13 -04:00
Ben Woodcroft ceb62d5436
gnu: Add roary.
* gnu/packages/bioinformatics.scm (roary): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 608dd93267
gnu: Add raxml.
* gnu/packages/bioinformatics.scm (raxml): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 024130d258
gnu: Add prank.
* gnu/packages/bioinformatics.scm (prank): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft b16728b068
gnu: Add exonerate.
* gnu/packages/bioinformatics.scm (exonerate): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft db7a344427
gnu: Add bppsuite.
* gnu/packages/bioinformatics.scm (bppsuite): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 159a701678
gnu: Add bpp-popgen.
* gnu/packages/bioinformatics.scm (bpp-popgen): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 8b5f4d5700
gnu: Add bpp-phyl.
* gnu/packages/bioinformatics.scm (bpp-phyl): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 70f1bc051a
gnu: Add bpp-seq.
* gnu/packages/bioinformatics.scm (bpp-seq): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 985d841144
gnu: Add bpp-core.
* gnu/packages/bioinformatics.scm (bpp-core): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 791c11d6a0
gnu: Add mcl.
* gnu/packages/machine-learning.scm (mcl): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft f559472939
gnu: Add perl-env-path.
* gnu/packages/perl.scm (perl-env-path): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft f82cef25ca
gnu: Add perl-test-files.
* gnu/packages/perl.scm (perl-test-files): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 67cc6d7380
gnu: Add perl-array-utils.
* gnu/packages/perl.scm (perl-array-utils): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft b33fdcc488
gnu: Add perl-file-grep.
* gnu/packages/perl.scm (perl-file-grep): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft b1ed9cf191
gnu: Add perl-file-path.
* gnu/packages/perl.scm (perl-file-path): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 8a525c3f08
gnu: Add perl-file-slurper.
* gnu/packages/perl.scm (perl-file-slurper): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 5eec378b79
gnu: Add perl-graph-readwrite.
* gnu/packages/xml.scm (perl-graph-readwrite): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 085f59a50e
gnu: Add perl-graph.
* gnu/packages/perl.scm (perl-graph): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 5e2b27b045
gnu: Add perl-parse-yapp.
* gnu/packages/perl.scm (perl-parse-yapp): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 176345c5b2
gnu: Add perl-xml-writer.
* gnu/packages/perl.scm (perl-xml-writer): New variable.
2016-08-08 22:08:17 +10:00
Ben Woodcroft 47bc991f71
gnu: parallel: Use full paths for executables.
* gnu/packages/parallel.scm (parallel)[inputs]: Add procps.
[arguments]: New field.
2016-08-08 22:07:49 +10:00
Efraim Flashner 7d229e2602
gnu: offlineimap: Update to 7.0.4.
* gnu/packages/mail.scm (offlineimap): Update to 7.0.4.
2016-08-07 21:44:51 +03:00
ng0 99840fbbee
gnu: Add ii.
* gnu/packages/irc.scm (ii): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-07 16:54:30 +03:00
ng0 8a48353a4f
gnu: zathura-pdf-poppler: Update to 0.2.6.
* gnu/packages/pdf.scm (zathura-pdf-poppler): Update to 0.2.6.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-07 16:54:30 +03:00
ng0 b7f3e363ee
gnu: zathura-djvu: Update to 0.2.5.
* gnu/packages/pdf.scm (zathura-djvu): Update to 0.2.5.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-07 16:54:30 +03:00
ng0 402a754724
gnu: zathura-ps: Update to 0.2.3.
* gnu/packages/pdf.scm (zathura-ps): Update to 0.2.3.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-07 16:54:30 +03:00
ng0 8dd739e1de
gnu: zathura-cb: Update to 0.1.5.
* gnu/packages/pdf.scm (zathura-cb): Update to 0.1.5.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-07 16:54:30 +03:00
ng0 860086529f
gnu: zathura: Update to 0.3.6.
* gnu/packages/pdf.scm (zathura): Update to 0.3.6.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-07 16:54:30 +03:00
ng0 97b66a91dd
gnu: girara: Update to 0.2.6.
* gnu/packages/gtk.scm (girara): Update to 0.2.6.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-07 16:54:30 +03:00
Leo Famulari 1ae44b802b
gnu: Add python-pythondialog.
* gnu/packages/python.scm (python-pythondialog): New variable.
(python2-pythondialog): Inherit from PYTHON-PYTHONDIALOG.

Co-authored-by: Vincent Legoll <vincent.legoll@idgrilles.fr>
2016-08-06 22:55:36 -04:00
Alex Griffin e87c7ec2de
gnu: Add bs1770gain.
* gnu/packages/video.scm (bs1770gain): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-06 22:50:15 -04:00
Ben Woodcroft 1817d30ad3
gnu: ruby-cucumber-core: Update to 1.5.0.
* gnu/packages/ruby.scm (ruby-cucumber-core): Update to 1.5.0.
2016-08-06 21:37:37 +10:00
Ben Woodcroft 9e12eba866
gnu: Add python-biom-format.
* gnu/packages/bioinformatics.scm (python-biom-format,
python2-biom-format): New variables.
2016-08-06 09:44:28 +10:00
Ben Woodcroft da4ac1aaa4
gnu: Add python-future.
* gnu/packages/python.scm (python-future, python2-future): New
variables.
2016-08-06 09:44:28 +10:00
Leo Famulari fd34d4f449
gnu: icedtea-8: Update to 3.1.0.
Fixes CVE-2016-{3458,3485,3500,3508,3550,3587,3606,3598,3610}.

* gnu/packages/java.scm (icedtea-8): Update to 3.1.0.
[native-inputs]: Add SHENANDOAH-DROP.
2016-08-05 18:43:19 -04:00
Leo Famulari 2b836df375
gnu: icedtea-7: Update to 2.6.7.
Fixes CVE-2016-{3458,3485,3500,3508,3550,3598,3606,3610}.

* gnu/packages/java.scm (icedtea-7):  Update to 2.6.7.
2016-08-05 18:43:19 -04:00
David Craven 00f4690568
services: Add spice vdagent service.
* gnu/services/spice.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Various Services): New subheading.
2016-08-05 21:48:43 +02:00
David Craven e02cd2b8fe
gnu: spice-vdagent: Set Exec path in spice-vdagent.desktop.
* gnu/packages/spice.scm (spice-vdagent): Set Exec path in
spice-vdagent.desktop.
2016-08-05 21:48:43 +02:00
David Craven 38b9ce44db
gnu: qemu: Enable spice support.
* gnu/packages/qemu.scm (qemu)[inputs]: Add SPICE and VIRGLRENDERER.
  (qemu-minimal)[inputs]: Remove SPICE and VIRGLRENDERER.
2016-08-05 21:48:43 +02:00
David Craven 2f04282297
gnu: qemu: Reorder inputs alphabetically.
* gnu/packages/qemu.scm (qemu): Reorder inputs alphabetically.
2016-08-05 21:48:43 +02:00
ng0 4cc4d363f2
gnu: tor: Update to 0.2.8.6.
* gnu/packages/tor.scm (tor): Update to 0.2.8.6.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2016-08-05 21:18:34 +02:00
Andreas Enge a1e0652dd8
gnu: qjson: Remove package.
* gnu/packages/qt.scm (qjson): Delete variable.
2016-08-05 21:16:36 +02:00
ng0 c744f5c0ad
gnu: Add ircii.
* gnu/packages/irc.scm (ircii): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-05 15:10:04 -04:00
Erik Edrosa e28e74a518
gnu: Add guile-commonmark
* gnu/packages/guile.scm (guile-commonmark): New variable.
2016-08-05 09:25:41 +02:00
Ricardo Wurmus f467c35261
gnu: tuxguitar: Update to 1.3.2.
* gnu/packages/music.scm (tuxguitar): Update to 1.3.2.
[arguments]: Use ant-build-system and rearrange build phases.
[native-inputs]: Remove field.
2016-08-04 21:32:13 +02:00
Ludovic Courtès d77a0bd6f1
ui: Remove dependency on (gnu system file-systems).
* guix/ui.scm (specification->file-system-mapping): Move to...
* gnu/system/file-systems.scm (specification->file-system-mapping):
... here.
2016-08-04 19:38:33 +02:00
Ludovic Courtès 7912677c1e
gnu: gcc: Reintroduce dependency on Texinfo.
This partly reverts 868c13c53a, which
introduced a regression whereby gcc@5 and gcc@6 would no longer contain
their Info manual.

* gnu/packages/gcc.scm (gcc-5)[native-inputs]: Remove.
2016-08-04 19:38:33 +02:00
Leo Famulari e686e633ad
gnu: curl: Replace with 7.50.1 [fixes CVE-2016-{3739,4802,5419,5420,5421].
* gnu/packages/curl.scm (curl)[replacement]: New field.
(curl-7.50.1): New variable.
2016-08-04 12:57:36 -04:00
Tobias Geerinckx-Rice 7ccb874a29
gnu: zsh: Move to shells.scm.
* gnu/packages/zsh.scm (zsh): Move from here ...
* gnu/packages/shells.scm (zsh): ... to here.
* gnu/packages/zsh.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove zsh.scm.
2016-08-04 08:17:39 -04:00
Mark H Weaver 536fc5f8cd
Merge branch 'core-updates' 2016-08-04 08:17:05 -04:00
Mark H Weaver 0832787e5c
Revert "Merge branch 'core-updates'"
This reverts commit 455859a50f.
2016-08-04 08:16:38 -04:00
Mark H Weaver 5b098cc4b9
Revert "gnu: zsh: Move to shells.scm."
This reverts commit 12b63ab505.
2016-08-04 08:16:27 -04:00
Ricardo Wurmus 8b52167e77
gnu: python-statsmodels: Fix tests.
* gnu/packages/statistics.scm (python-statsmodels): Add patch to fix tests.
(python2-statsmodels)[propagated-inputs]: Add python2-pytz.
* gnu/packages/patches/python-statsmodels-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-08-04 13:40:13 +02:00
Andreas Enge 6ad08117d9
gnu: gtk-doc: Disable parallel tests.
* gnu/packages/gtk.scm (gtk-doc)[arguments]: Disable parallel tests.
2016-08-04 12:46:28 +02:00
Andreas Enge 9d19e18d24
gnu: gtk-doc: Update to 1.25.
* gnu/packages/gtk.scm (gtk-doc): Update to 1.25.
2016-08-04 12:46:28 +02:00
Ben Woodcroft 752bb44794
gnu: python2-bz2file: Use python-2.
This is a followup to 124df723a0.
Problem reported by Andreas Enge <andreas@enge.fr>.

* gnu/packages/python.scm (python2-bz2file)[arguments]: Use python-2.
2016-08-04 20:09:40 +10:00
Andreas Enge 2470d779c9
gnu: qt: Update to 5.6.1-1.
* gnu/packages/qt.scm (qt): Update to 5.6.1-1.

Co-authored-by: David Craven <david@craven.ch>
2016-08-04 09:56:03 +02:00
Andreas Enge cce28b0c3a
gnu: qt: Use modify-phases syntax.
* gnu/packages/qt.scm (qt): Use modify-phases syntax.
2016-08-04 09:56:03 +02:00
Andreas Enge 7972d8a2e9
gnu: qtbase: Modify .cmake files to enable modules in different packages.
* gnu/packages/qt.scm (qtbase)[arguments]: In the configure phase, modify
.cmake and .cmake.in files so that find_package honors CMAKE_PREFIX_PATH.
2016-08-04 01:19:12 +02:00
Ricardo Wurmus 0ea179fd92
gnu: Add GCompris.
* gnu/packages/education.scm (gcompris): New variable.
2016-08-03 18:50:26 +02:00
Ludovic Courtès 134f657318
Merge branch 'version-0.11.0' 2016-08-03 18:37:18 +02:00
Ricardo Wurmus 97b9da6897
gnu: Add discrover.
* gnu/packages/bioinformatics.scm (discrover): New variable.
2016-08-03 17:20:26 +02:00
ng0 b7194849ad
Rename references to (gnu packages tcsh).
* gnu/packages/algebra.scm, gnu/packages/boost.scm,
gnu/packages/maths.scm, gnu/packages/tex.scm, gnu/packages/vim.scm:
Change broken references to module (gnu packages tcsh) to (gnu packages
shells).
2016-08-03 16:22:31 +02:00
Ben Woodcroft afde1a264b
gnu: fxtract: Restrict to x86_64-linux.
* gnu/packages/bioinformatics.scm (fxtract)[supported-systems]: Restrict to
  x86_64-linux.
2016-08-03 21:22:02 +10:00
Ben Woodcroft 124df723a0
gnu: python-bz2file: Disable tests.
* gnu/packages/python.scm (python-bz2file)[arguments]: Disable
tests.
(python2-bz2file)[arguments]: New field.
2016-08-03 21:08:39 +10:00
Ludovic Courtès d76f44e84c
gnu: mdadm: Build without '-Werror'
* gnu/packages/linux.scm (mdadm)[arguments]: Add 'remove-W-error'
phase.
2016-08-03 12:10:00 +02:00
Ludovic Courtès 8aceca50cd
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 4420940.
(guix): Set to GUIX-DEVEL.
2016-08-03 10:56:45 +02:00
Tobias Geerinckx-Rice 12b63ab505
gnu: zsh: Move to shells.scm.
* gnu/packages/zsh.scm (zsh): Move from here ...
* gnu/packages/shells.scm (zsh): ... to here.
* gnu/packages/zsh.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove zsh.scm.
2016-08-03 04:54:34 +02:00
Tobias Geerinckx-Rice d754347cb4
gnu: tcsh: Move to shells.scm.
* gnu/packages/tcsh.scm (tcsh): Move from here ...
* gnu/packages/shells.scm (tcsh): ... to here.
* gnu/packages/tcsh.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove tcsh.scm.
2016-08-03 04:54:29 +02:00
Tobias Geerinckx-Rice 9a57d3e6a1
gnu: rc: Move to shells.scm.
* gnu/packages/rc.scm (rc): Move from here ...
* gnu/packages/shells.scm (rc): ... to here.
* gnu/packages/rc.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove rc.scm.
2016-08-03 04:54:24 +02:00
Tobias Geerinckx-Rice 618977ae38
gnu: fish: Move to shells.scm.
* gnu/packages/fish.scm (fish): Move from here ...
* gnu/packages/shells.scm (fish): ... to here.
* gnu/packages/fish.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove fish.scm.
2016-08-03 04:54:18 +02:00
Tobias Geerinckx-Rice c356339d62
gnu: Add dash.
* gnu/packages/shells.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register it.
2016-08-03 04:54:11 +02:00
Ludovic Courtès 4420940f20
gnu: guix: Update to 0.11.0.
* gnu/packages/package-management.scm (guix-0.10.0): Rename to...
(guix-0.11.0): ... this.  Adjust users.
(guix): Set to GUIX-0.11.0.
2016-08-03 01:19:46 +02:00
Ludovic Courtès 10618627bf
mapped-devices: raid-device-mapping: Avoid non-top-level 'use-modules'.
Fixes <http://bugs.gnu.org/24135>.
Reported by myglc2 <myglc2@gmail.com>.

* gnu/system/mapped-devices.scm (open-raid-device): Avoid non-top-level
'use-modules' form.
2016-08-03 00:07:06 +02:00
Ludovic Courtès 35c4aec88d
build: Add missing procps patch to the distribution.
The patch was added to gnu/local.mk in
d46123aade and inadvertently removed in a
subsequent merge.

* gnu/local.mk (dist_patch_DATA): Add procps-non-linux.patch.
2016-08-02 23:43:29 +02:00
Leo Famulari 4e92d76a40
gnu: python-atomicwrites: Update to 1.1.0.
* gnu/packages/python.scm (python-atomicwrites, python2-atomicwrites):
Update to 1.1.0.
2016-08-02 16:24:11 -04:00
Francesco Frassinelli 319ac02b5a
gnu: Add Seren.
* gnu/packages/telephony.scm (seren): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-08-02 22:12:45 +03:00
Pjotr Prins 0a4ebe0148
gnu: Add Elixir.
* gnu/packages/elixir.scm: New file.
* gnu/packages/patches/elixir-disable-failing-tests.patch: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add module.
(dist_patch_DATA): Add patch.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
2016-08-02 18:31:29 +02:00
Leo Famulari deb6482ec6
gnu: libressl: Update to 2.4.2.
* gnu/packages/tls.scm (libressl): Update to 2.4.2.
2016-08-02 12:22:59 -04:00
Ludovic Courtès ab3a64507a
system: Define 'GUIX_LOCPATH' to work around 'glibc' package defect.
Our 'glibc' package currently ignores /run/current-system/locale,
although the intent is to look for locales in that directory.

* gnu/packages/base.scm (glibc/linux): Add comment about
/run/current-system/locale being ignored.
* gnu/system.scm (operating-system-environment-variables): Add
'GUIX_LOCPATH'.
* gnu/tests/base.scm (run-basic-test): Add "locale" test.
2016-08-02 18:07:19 +02:00
Alex Sassmannshausen e2b12a55c1
gnu: Add perl-log-any-adapter-log4perl.
* gnu/packages/perl.scm (perl-log-any-adapter-log4perl): New variable.
2016-08-02 16:39:08 +02:00
Alex Sassmannshausen 9ec9e49466
gnu: Add perl-log-log4perl.
* gnu/packages/perl.scm (perl-log-log4perl): New variable.
2016-08-02 16:39:08 +02:00
Alex Sassmannshausen cf5e49cdc5
gnu: Add perl-log-any.
* gnu/packages/perl.scm (perl-log-any): New variable.
2016-08-02 16:39:08 +02:00
Ricardo Wurmus fede3a903e
gnu: Add emacs-visual-fill-column.
* gnu/packages/emacs.scm (emacs-visual-fill-column): New variable.
2016-08-02 15:20:43 +02:00
Christopher W. Carpenter 3701f014b1
gnu: ccl: Update to 1.11.
* gnu/packages/lisp.scm (ccl): Update to 1.11.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-08-02 21:04:56 +08:00
Ricardo Wurmus dda3627141
gnu: r-variantannotation: Update to 1.18.6.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.18.6.
2016-08-02 14:47:46 +02:00
Ricardo Wurmus 005ca42396
gnu: r-genomationdata: Update to 1.4.2.
* gnu/packages/bioinformatics.scm (r-genomationdata): Update to 1.4.2.
2016-08-02 14:47:46 +02:00
Ludovic Courtès 7b5fc3a320
gnu: kde-frameworks: Fix version numbers.
Fixes a regression introduced in
d26e2b9f30.

* gnu/packages/kde-frameworks.scm (kwindowsystem, oxygen-icons): Set to
"5.21.0".
2016-08-02 14:40:17 +02:00
Ludovic Courtès 47e2fe3cdf
gnu: extra-cmake-modules: Add proper 'version'.
Fixes a regression introduced in
d26e2b9f30.

* gnu/packages/kde-frameworks.scm (extra-cmake-modules)[version]: Set to
"5.21.0".
2016-08-02 14:28:47 +02:00
Ludovic Courtès 873b51b340
mapped-devices: Bail out when RAID sources don't show up.
* gnu/system/mapped-devices.scm (open-raid-device): Bail out after 20
loop iterations.
2016-08-02 13:53:25 +02:00
Ludovic Courtès 7f8ad82bf2
mapped-devices: Make RAID device opening message clearer.
* gnu/system/mapped-devices.scm (open-raid-device): Rename 'source' to
'sources'.  Make 'waiting' message more informative.
(close-raid-device): Rename 'source' to 'sources'.
2016-08-02 13:53:25 +02:00
Ludovic Courtès dfe06f6e7f
mapped-devices: Do not always use (gnu build file-systems).
Fixes <http://bugs.gnu.org/24129>.
Reported by myglc2 <myglc2@gmail.com>.

* gnu/system/mapped-devices.scm (device-mapping-service-type): Remove
'modules' field from 'shepherd-service' form.
(open-luks-device): Add 'use-modules' form.
2016-08-02 13:53:25 +02:00
David Craven d26e2b9f30
gnu: kde-frameworks: Remove kde-frameworks-version.
* gnu/packages/kde-frameworks (kde-frameworks-version): Delete variable.
  (kwindowsystem)[version]: Replace kde-frameworks-version with version string.
  (oxygen-icons)[version]: Replace kde-frameworks-version with version string.
2016-08-02 13:29:47 +02:00
David Craven b93502d6ba
gnu: network-manager: Propagate GLIB.
* gnu/packages/gnome.scm (network-manager)[propagated-inputs]: Add glib.
2016-08-02 13:28:21 +02:00
Andreas Enge cc30a47273
gnu: powwow: Use HTTPS download.
* gnu/packages/games.scm (powwow)[source]: Use HTTPS URL.
2016-08-02 11:21:00 +02:00
Leo Famulari 5f518cadc3
gnu: vdirsyncer: Update to 0.11.3.
* gnu/packages/dav.scm (vdirsyncer): Update to 0.11.3.
2016-08-01 21:06:42 -04:00
nee 826a3ca22c
gnu: Add supertux.
* gnu/packages/games.scm (supertux): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-08-01 20:40:20 -04:00
Leo Famulari 621954ba4e
gnu: htop: Update to 2.0.2.
* gnu/packages/admin.scm (htop): Update to 2.0.2.
2016-08-01 19:06:18 -04:00
Ludovic Courtès 455859a50f
Merge branch 'core-updates' 2016-08-01 23:30:52 +02:00
Ludovic Courtès a8cb87abe9
install: Add nvi to the image.
* gnu/system/install.scm (installation-os)[packages]: Add NVI.
* doc/guix.texi (Proceeding with the Installation): Mention it.
2016-08-01 23:08:48 +02:00
Mark H Weaver 742effef56
gnu: openssh: Update to 7.3p1.
* gnu/packages/ssh.scm (openssh): Update to 7.3p1.
[source]: Remove patches.
* gnu/packages/patches/openssh-CVE-2015-8325.patch,
gnu/packages/patches/openssh-CVE-2016-6210-1.patch,
gnu/packages/patches/openssh-CVE-2016-6210-2.patch,
gnu/packages/patches/openssh-CVE-2016-6210-3.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2016-08-01 14:27:08 -04:00
Kei Kebreau 660e005c21
gnu: red-eclipse: Replace string with version number variable.
* gnu/packages/games.scm (red-eclipse)[phases]: Replace it.
2016-08-01 13:42:29 -04:00
Ludovic Courtès a348af403d
gnu: texlive-texmf: Mark as non-substitutable.
* gnu/packages/tex.scm (texlive-texmf)[arguments]: Add #:substitutable?.
2016-08-01 19:00:43 +02:00
Kei Kebreau 66c65aafa7
gnu: red-eclipse: Add example server configuration file to config
directory.

* gnu/packages/games.scm (red-eclipse)[phases]: Add server configuration
file.
2016-08-01 11:48:39 -04:00
Kei Kebreau 14b865dc3e
gnu: red-eclipse: Update to 1.5.5.
* gnu/packages/games.scm (red-eclipse): Update to 1.5.5.
[arguments]: Adjust phases.
[inputs]: Use sdl2.
2016-08-01 11:47:18 -04:00
Kei Kebreau 06438b07b9
gnu: dmidecode: Update to 3.0.
* gnu/packages/admin.scm (dmidecode): Update to 3.0.
[arguments]: Use ’modify-phases’ instead of ‘alist-delete’.
2016-08-01 08:55:28 -04:00
Ricardo Wurmus a4e6356e11
gnu: Add trio.
* gnu/packages/code.scm (trio): New variable.
2016-08-01 14:06:03 +02:00
Ben Woodcroft 26af1c8d13
gnu: ruby-ffi: Update to 1.9.14.
* gnu/packages/ruby.scm (ruby-ffi): Update to 1.9.14.
2016-08-01 21:30:49 +10:00
Ben J Woodcroft 7b01f250e4
gnu: ruby-nokogiri: Update to 1.6.8.
* gnu/packages/ruby.scm (ruby-nokogiri): Update to 1.6.8.
[arguments]: Remove 'update-dependency' phase.  Add 'patch-extconf' phase.
[native-inputs]: Remove ruby-rake-compiler.
[propagated-inputs]: Add ruby-pkg-config.
2016-08-01 21:30:49 +10:00
Ben J Woodcroft 2de61e340c
gnu: Add ruby-pkg-config.
* gnu/packages/ruby.scm (ruby-pkg-config): New variable.
2016-08-01 21:30:49 +10:00
Ludovic Courtès 683a4a34cd
gnu: openssh: Add dependency on xauth.
Partly fixes <http://bugs.gnu.org/23317>.
Reported by Danny Milosavljevic <dannym@scratchpost.org>.

* gnu/packages/ssh.scm (openssh)[inputs]: Add XAUTH.
2016-08-01 11:26:33 +02:00
Andreas Enge 2be896dec1
gnu: unison: Add input ghostscript.
* gnu/packages/ocaml.scm (unison)[native-inputs]: Add ghostscript.

This is a follow-up to commit e83a13faa2.
2016-08-01 10:24:07 +02:00
Mark H Weaver 3d337bbc39
Merge branch 'master' into core-updates 2016-07-31 23:27:03 -04:00
Mark H Weaver 4e8efc15fb
gnu: linux-libre@4.1: Update to 4.1.29.
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.29.
2016-07-31 23:24:54 -04:00
ng0 3920868c0c
gnu: Add libgnomekbd.
* gnu/packages/gnome.scm (libgnomekbd): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-08-01 01:11:57 +02:00
Eric Le Bihan cf04df0701
gnu: Add s6-linux-utils.
* gnu/packages/skarnet.scm (s6-linux-utils): New variable.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-08-01 01:11:57 +02:00
Eric Le Bihan 915db95f67
gnu: Add s6-portable-utils.
* gnu/packages/skarnet.scm (s6-portable-utils): New variable.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-08-01 01:11:57 +02:00
Eric Le Bihan 35977a8897
gnu: Add s6-rc.
* gnu/packages/skarnet.scm (s6-rc): New variable.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-08-01 01:11:57 +02:00
Ludovic Courtès 5e74529271
gnu: units: Update to 2.13.
* gnu/packages/maths.scm (units): Update to 2.13.
2016-08-01 01:11:57 +02:00
Matthew Jordan ec91bcb500
gnu: Add Go 1.6.
* gnu/packages/golang.scm (go-1.6): New variable.

Co-authored-by: Efraim Flashner <efraim@flashner.co.il>
Co-authored-by: Andy Wingo <wingo@igalia.com>
Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-08-01 01:11:57 +02:00
Leo Famulari f92d99a5a3
gnu: imagemagick: Update to 6.9.5-4 [fixes CVE-2016-6491].
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.5-4.
2016-07-31 18:58:19 -04:00
Albin Söderqvist eb3bd6762a
gnu: openttd: Update to 1.6.1.
* gnu/packages/games.scm (openttd): Update to 1.6.1 and expand the
package description.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2016-07-31 22:52:12 +02:00
Andy Patterson 932b2ea206
gnu: ecl: Use "kernel-headers" instead of "linux-headers" to designate input.
* gnu/packages/lisp.scm (ecl)[arguments]: Use "kernel-headers" as the
identifier for an input.

This is a follow-up to commit 55de892b43.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2016-07-31 20:13:16 +02:00
Andreas Enge 42bf34298e
gnu: rapicorn: Add patch to handle isnan.
* gnu/packages/patches/rapicorn-isnan.patch: New file.
* gnu/packages/graphics.scm (rapicorn)[source]: Add patch.
* gnu/local.mk (dist_patch_DATA): Register patch.
2016-07-31 18:16:25 +02:00
Andreas Enge acac969fa2
gnu: fastcap: Add input ghostscript.
* gnu/packages/engineering.scm (fastcap)[native-inputs]: Add ghostscript.

This is a follow-up to commit e83a13faa2.
2016-07-31 17:11:15 +02:00
Andreas Enge dceba1c19b
gnu: zsh: Update to 5.2.
* gnu/packages/zsh.scm (zsh): Update to 5.2.
2016-07-31 17:05:36 +02:00
Andreas Enge ce430bd637
gnu: tcc: Use "kernel-headers" instead of "linux-headers" to designate input.
* gnu/packages/c.scm (tcc)[arguments]: Use "kernel-headers" as identifier
for an input.

This is a follow-up to commit 55de892b43.
2016-07-31 16:50:12 +02:00
Andreas Enge 70a967209c
gnu: dealii: Unregister deleted patch.
* gnu/local.mk (dist_patch_DATA): Drop deleted patch.

This is a follow-up to commit 101e847294.
2016-07-31 16:37:39 +02:00
Andreas Enge 101e847294
gnu: dealii: Update to 8.4.1.
* gnu/packages/maths.scm (dealii): Update to 8.4.1.
* gnu/packages/patches/dealii-p4est-interface.patch: Remove file.
2016-07-31 15:22:41 +02:00
Andreas Enge 7b995c7bcb
gnu: wine: Update to 1.9.15.
* gnu/packages/wine.scm (wine): Update to 1.9.15.
2016-07-31 12:11:05 +02:00
Andreas Enge bb484529cc
gnu: python-alembic: Update to 0.8.7.
* gnu/packages/python.scm (python-alembic): Update to 0.8.7.
2016-07-31 11:18:53 +02:00
Andreas Enge 33906d54c1
gnu: perl-xml-libxml: Update to 2.0128.
* gnu/packages/xml.scm (perl-xml-libxml): Update to 2.0128.
2016-07-31 09:55:14 +02:00
宋文武 85860fdf82
gnu: glibc-locales: Fix build.
* gnu/packages/patches/glibc-locales.patch: Adjust to glibc-2.23.
* gnu/packages/base.scm (glibc-locales)[arguments]:
Pass 'lib_cv_complocaledir'.
2016-07-31 10:42:47 +08:00
Tomáš Čech 2fa66f451a
gnu: mutt: Update to 1.6.2.
* gnu/packages/mail.scm(mutt): Update to 1.6.2.
2016-07-30 22:37:56 +02:00
Kei Kebreau 4bc37bf0c3
gnu: Add python-pygame.
* gnu/packages/game-development.scm (python-pygame): New variable.
2016-07-30 14:32:49 -04:00
Kei Kebreau d8841cc52e
gnu: Add libsmpeg.
* gnu/packages/video.scm (libsmpeg): New variable.
2016-07-30 14:31:58 -04:00
Leo Famulari 6661db4e97
gnu: stellarium: Improve description.
Suggested by Danny Milosavljevic <dannym@scratchpost.org>.

* gnu/packages/education.scm (stellarium)[description]: Mention telescope
tracking.
2016-07-30 10:05:44 -04:00
Ludovic Courtès c2c54ebd91
gnu: Add glibc 2.22.
* gnu/packages/base.scm (glibc-2.22): New variable.
(glibc-2.21): Inherit from it; remove 'arguments' field.
2016-07-30 15:47:28 +02:00
Ludovic Courtès 716753cb97
tests: base: Correct invalid merge.
Fixes a regression introduced by merge commit
7575655212.

* gnu/tests/base.scm (run-basic-test)[test]: Fix list of 'use-modules'
and 'test-begin' call.
2016-07-30 15:47:28 +02:00
Ben Woodcroft c4382cd18f
gnu: diamond: Update to 0.8.17.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.17.
2016-07-30 23:02:57 +10:00
ng0 9b12bc7032
gnu: gnunet-gtk: Configure with gnunet path.
* gnun/packages/gnunet.scm (gnunet-gtk)[arguments]: Add '--with-gnunet'
to #:configure-flags.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-07-30 15:33:57 +08:00
Eric Bavier d25639731a
gnu: Add tuxpaint-config.
* gnu/packages/games.scm (tuxpaint-config): New variable.
2016-07-29 23:17:44 -05:00
Eric Bavier c3d850f232
gnu: Add tuxpaint-stamps.
* gnu/packages/games.scm (tuxpaint-stamps): New variable.
2016-07-29 21:50:15 -05:00
Eric Bavier 9b1ada4e81
gnu: Add Tux Paint.
* gnu/packages/games.scm (tuxpaint): New variable.
* gnu/packages/patches/tuxpaint-stamps-path.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-07-29 21:50:15 -05:00
Alex Griffin 23319ed674
gnu: beets: Update to 1.3.19.
* gnu/packages/music.scm (beets): Update to 1.3.19.
[source]: Remove patch to skip failing tests.
* gnu/packages/patches/beets-image-test-failure.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-29 19:19:49 -04:00
Leo Famulari d1c9d3bb42
gnu: python-protobuf: Update to 3.0.0.
* gnu/packages/protobuf.scm (python-protobuf, python2-protobuf):
Update to 3.0.0.
2016-07-29 19:04:31 -04:00
Leo Famulari 48b7e4a6c1
gnu: btrfs-progs: Update to 4.6.1
* gnu/packages/linux.scm (btrfs-progs): Update to 4.6.1.
[native-inputs]: Add WHICH.
2016-07-29 18:58:48 -04:00
Mark H Weaver 359aba76b6
Merge branch 'master' into core-updates 2016-07-29 18:29:58 -04:00
Mark H Weaver 9bdf56dc13
gnu: gd: Add fix for gd2_read test.
* gnu/packages/patches/gd-fix-gd2-read-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gd.scm (gd)[source]: Add patch.
2016-07-29 18:28:40 -04:00
Leo Famulari de30a6e0f0
gnu: protobuf: Update to 2.6.1.
* gnu/packages/protobuf.scm (protobuf): Update to 2.6.1.
[source]: Update to new upstream URL.
2016-07-29 16:41:06 -04:00
Mark H Weaver 31c995f8af
Revert "gnu: gd: Add fix for gd2_read test."
This reverts commit ce290354ec.
2016-07-29 16:17:35 -04:00
Mark H Weaver ce290354ec
gnu: gd: Add fix for gd2_read test.
* gnu/packages/patches/gd-fix-gd2-read-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gd.scm (gd)[source]: Add patch.
2016-07-29 16:06:43 -04:00
Leo Famulari 814572aff5
gnu: wireshark: Update to 2.0.5.
* gnu/packages/networking.scm (wireshark): Update to 2.0.5.
2016-07-29 15:08:55 -04:00
Leo Famulari d260015062
gnu: perl-dbd-mysql: Update to 4.035 [fixes CVE-2015-8949].
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.035.
2016-07-29 14:49:30 -04:00
Mark H Weaver 0bab3af078
Merge branch 'master' into core-updates 2016-07-29 14:18:07 -04:00
Mark H Weaver 682a7d2338
gnu: linux-libre@4.4: Update to 4.4.16.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.16.
2016-07-29 14:14:25 -04:00
Mark H Weaver a81445737d
gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207].
* gnu/packages/patches/gd-CVE-2016-5766.patch,
gnu/packages/patches/gd-CVE-2016-6128.patch,
gnu/packages/patches/gd-CVE-2016-6132.patch,
gnu/packages/patches/gd-CVE-2016-6214.patch,
gnu/packages/patches/gd-fix-test-on-i686.patch: Delete files.
* gnu/packages/patches/gd-fix-tests-on-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/gd.scm (gd): Update to 2.2.3.
[source]: Update patches field accordingly.
2016-07-29 13:56:39 -04:00
Leo Famulari f54510d29b
gnu: virt-viewer: Remove SPICE-PROTOCOL from inputs.
This is a followup to ba9e2ee64a.

* gnu/packages/spice.scm (virt-viewer)[inputs]: Remove SPICE-PROTOCOL.
2016-07-29 12:50:29 -04:00
Leo Famulari 3c4a8f03a2
gnu: spice-gtk: Remove LIBUSB from inputs.
This is a followup to 0d05a739d2.

* gnu/packages/spice.scm (spice-gtk)[inputs]: Remove LIBUSB.
2016-07-29 12:50:29 -04:00
David Craven efcada41e7
gnu: Order module imports in (gnu packages qemu) alphabetically.
* gnu/packages/qemu.scm: Order module imports alphabetically.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:43:55 +02:00
David Craven 6799ed7614
gnu: Add xf86-video-qxl.
* gnu/packages/xorg.scm (xf86-video-qxl): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:41:30 +02:00
David Craven c38fb02e9b
gnu: Add libinput-minimal.
* gnu/packages/freedesktop.scm (libinput-minimal): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:40:24 +02:00
David Craven 66e076642c
gnu: Remove trailing periods from synopsis.
* gnu/packages/emacs.scm (emacs-smart-mode-line): Update synopsis.
* gnu/packages/gnustep.scm (wmfire): Update synopsis.
* gnu/packages/haskell.scm (ghc-socks): Update synopsis.
* gnu/packages/kde-frameworks.scm (oxygen-icons): Update synopsis.
* gnu/packages/openstack.scm (python-bandit): Update synopsis.
* gnu/packages/perl.scm (perl-test-trap): Update synopsis.
* gnu/packages/python.scm (python-backports-abc): Update synopsis.
* gnu/packages/ruby.scm (python-cryptography-vectors): Update synopsis.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:37:22 +02:00
David Craven 0160458bf8
gnu: Use define-public to export packages.
* gnu/packages/bison.scm (bison): Define public.
* gnu/packages/flex.scm (flex): Define public.
* gnu/packages/pulseaudio.scm (libsndfile, libsamplerate, pulseaudio): Define
public.
* gnu/packages/sdl.scm (sdl, sdl2, libmikmod, sdl-gfx, sdl-image, sdl-mixer,
sdl-net, sdl-ttf): Define public.
* gnu/packages/search.scm (xapian): Remove unnecessary #:export.
* gnu/packages/swig.scm (swig): Define public.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:35:20 +02:00
Ludovic Courtès 35e4b3d546
gnu: iptables: Mention "firewall".
Suggested by ng0 <ng0@we.make.ritual.n0.is>.

* gnu/packages/linux.scm (iptables)[description]: Mention "firewall".
2016-07-29 17:32:03 +02:00
Eric Le Bihan 7c6bdeec23
gnu: Add s6-networking.
* gnu/packages/skarnet.scm (s6-networking): New variable.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:29:50 +02:00
Eric Le Bihan 798b776deb
gnu: Add s6-dns.
* gnu/packages/skarnet.scm (s6-dns): New variable.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:29:50 +02:00
Eric Le Bihan 918cee467d
gnu: Add s6.
* gnu/packages/skarnet.scm (s6): New variable.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:29:50 +02:00
Eric Le Bihan 2f016ac150
gnu: execline: Update to 2.1.5.0.
* gnu/packages/skarnet.scm (execline): Update to 2.1.5.0.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:29:50 +02:00
Eric Le Bihan 892aa89477
gnu: skalibs: Update to 2.3.10.0.
* gnu/packages/skarnet.scm (skalibs): Update to 2.3.10.0.

Signed-off-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:29:50 +02:00
Danny Milosavljevic 2614de3c5a
gnu: Add stellarium.
* gnu/local.mk: Include gnu/packages/education.scm .
* gnu/packages/education.scm: Add new file.
* gnu/packages/education.scm (stellarium): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 17:29:50 +02:00
Leo Famulari ba9e2ee64a
gnu: spice-gtk: Propagate SPICE-PROTOCOL.
* gnu/packages/spice.scm (spice-gtk)[inputs]: Move SPICE-PROTOCOL to...
[propagated-inputs]: ... here.
2016-07-29 11:16:23 -04:00
Leo Famulari 0d05a739d2
gnu: usbredir: Propagate LIBUSB.
* gnu/packages/spice.scm (usbredir)[inputs]: Replace field with ...
[propagated-inputs]: ... new field.
2016-07-29 11:16:23 -04:00
Ludovic Courtès 6e6ddebf48
gnu: guix: Add dependency on zlib.
* gnu/packages/package-management.scm (guix-0.10.0)[inputs]: Add ZLIB.
2016-07-29 11:39:30 +02:00
Alex Griffin 61201e46a7
gnu: password-store: Wrap PATH.
* gnu/packages/password-utils.scm (password-store)
[arguments]: Wrap PATH more thoroughly.
[native-inputs]: Move getopt to inputs.
[inputs]: Add sed.

Signed-off-by: Mathieu Lirzin <mthl@gnu.org>
2016-07-29 11:00:31 +02:00
Ludovic Courtès f33e71fca2
gnu: perl-dbd-pg: Add description.
* gnu/packages/databases.scm (perl-dbd-pg)[description]: Add non-empty
description.
2016-07-29 10:22:31 +02:00
Ludovic Courtès a3947cb1b8
gnu: Sync GNU descriptions with upstream.
From 'guix lint -c gnu-description'.

* gnu/packages/gnunet.scm (gnunet): Adjust description.
* gnu/packages/marst.scm (marst): Likewise.
* gnu/packages/maths.scm (c-graph): Likewise.
* gnu/packages/networking.scm (macchanger): Likewise.
2016-07-29 10:13:12 +02:00
Nicolas Goaziou c777570b57
gnu: Add sshpass.
* gnu/packages/ssh.scm (sshpass): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-29 00:04:39 +02:00
Leo Famulari cfbb3b0d00
gnu: python-beautifulsoup4: Update to 4.5.0.
* gnu/packages/python.scm (python-beautifulsoup4, python2-beautifulsoup4):
Update to 4.5.0.
2016-07-28 17:50:52 -04:00
ng0 adca268e97
gnu: perl-devel-symdump: Update to 2.17.
* gnu/packages/perl.scm (perl-devel-symdump): Update to 2.17.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:41:06 -04:00
David Craven 6144dff516
gnu: Add virt-viewer.
* gnu/packages/spice.scm (virt-viewer): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:42 -04:00
David Craven 33b0f4a4b2
gnu: Add spice-vdagent.
* gnu/packages/spice.scm (spice-vdagent): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:42 -04:00
David Craven 3cbd37e440
gnu: Add spice.
* gnu/packages/spice.scm (spice): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:42 -04:00
David Craven bb28cf90e9
gnu: Add spice-gtk.
* gnu/packages/spice.scm (spice-gtk): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:42 -04:00
David Craven 289e472f56
gnu: Add spice-protocol.
* gnu/packages/spice.scm (spice-protocol): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:41 -04:00
David Craven 2ef2654de4
gnu: Add virglrenderer.
* gnu/packages/spice.scm (virglrenderer): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:41 -04:00
David Craven 1d2c67c11e
gnu: Add usbredir.
* gnu/packages/spice.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-28 17:08:41 -04:00
Leo Famulari 49d725a108
Merge branch 'master' into core-updates 2016-07-28 16:46:27 -04:00
Leo Famulari a1dfa02233
Revert "gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207]."
This reverts commit ae46cd0e4c.
2016-07-28 16:45:02 -04:00
Mark H Weaver 622c22ccb4
Merge branch 'master' into core-updates 2016-07-28 14:13:26 -04:00
Mark H Weaver ae46cd0e4c
gnu: gd: Update to 2.2.3 [fixes CVE-2016-6207].
* gnu/packages/patches/gd-CVE-2016-5766.patch,
gnu/packages/patches/gd-CVE-2016-6128.patch,
gnu/packages/patches/gd-CVE-2016-6132.patch,
gnu/packages/patches/gd-CVE-2016-6214.patch,
gnu/packages/patches/gd-fix-test-on-i686.patch: Delete files.
* gnu/packages/patches/gd-fix-tests-on-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/gd.scm (gd): Update to 2.2.3.
[source]: Update patches field accordingly.
2016-07-28 14:06:12 -04:00
Ludovic Courtès 386b71d1b9
gnu: commencement: 'guile-final' is now "hidden".
This way, we no longer have this annoying warning:

  $ guix build guile -n
  guix build: warning: ambiguous package specification `guile'
  guix build: warning: choosing guile-2.0.11 from gnu/packages/guile.scm:128:2

* gnu/packages/commencement.scm (guile-final): Use 'hidden-package'.
* tests/packages.scm ("fold-packages, hidden package"): New test.
2016-07-28 18:53:13 +02:00
Ludovic Courtès 6980511b73
packages: Add 'hidden-package'.
* guix/packages.scm (hidden-package, hidden-package?): New procedures.
* gnu/packages.scm (fold-packages): Filter out 'hidden-package?'.
* tests/packages.scm ("hidden-package"): New test.
2016-07-28 18:50:43 +02:00
Alex Griffin cb55f9c652
gnu: Add asciinema.
* gnu/packages/terminals.scm (asciinema): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-28 15:43:40 +02:00
Alex Griffin 71d9b98078
gnu: gnome: Propagate file-roller.
* gnu/packages/gnome.scm (gnome)[propagated-inputs]: Add file-roller.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-28 15:42:30 +02:00
Ludovic Courtès 212163f8d5
gnu: dico: Patch 'idxgcide' bug.
* gnu/packages/patches/dico-idxgcide-bug.patch: New file.
* gnu/packages/dico.scm (dico)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-07-28 14:18:59 +02:00
Ludovic Courtès c6b3dc69bd
gnu: vlc: Drop -ffast-math from the compilation flags.
* gnu/packages/video.scm (vlc)[arguments]: Add "ac_cv_c_fast_math=no" to
  #:configure-flags.
2016-07-28 13:56:05 +02:00
Ben Woodcroft 6547708f71
gnu: r-genomicfeatures: Update to 1.24.5.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.24.5.
2016-07-28 21:54:44 +10:00
Ben Woodcroft 2c9f6251fc
gnu: r-bsgenome: Update to 1.40.1.
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.40.1.
2016-07-28 21:45:17 +10:00
Ben Woodcroft b0f0778a7c
gnu: r-iranges: Update to 2.6.1.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.6.1.
2016-07-28 21:45:17 +10:00
Ben Woodcroft f403941f81
gnu: r-limma: Update to 3.28.17.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.28.17.
2016-07-28 21:45:16 +10:00
Ben Woodcroft 2b2ff0bd91
gnu: r-xvector: Update to 0.12.1.
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.12.1.
2016-07-28 21:45:16 +10:00
Ben Woodcroft a463055862
gnu: r-genomicranges: Update to 1.24.2.
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.24.2.
2016-07-28 21:45:16 +10:00
Ben Woodcroft bab15ccec4
gnu: r-annotationdbi: Update to 1.34.4.
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.34.4.
2016-07-28 21:45:15 +10:00
Ben Woodcroft a22999f245
gnu: r-biocparallel: Update to 1.6.3.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.6.3.
2016-07-28 21:45:15 +10:00
Ben Woodcroft d104fc607d
gnu: r-biostrings: Update to 2.40.2.
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.40.2.
2016-07-28 21:45:15 +10:00
Ben Woodcroft 1864e051c9
gnu: r-summarizedexperiment: Update to 1.2.3.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.2.3.
2016-07-28 21:45:15 +10:00
Ben Woodcroft 29b0cc8ad5
gnu: r-genomicalignments: Update to 1.8.4.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.8.4.
2016-07-28 21:45:14 +10:00
Ben Woodcroft 5131e21064
gnu: r-rtracklayer: Update to 1.32.2.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.32.2.
2016-07-28 21:45:14 +10:00
Ben Woodcroft 2a3e325f5e
gnu: r-genomeinfodb: Update to 1.8.3.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.8.3.
2016-07-28 21:45:14 +10:00
Ben Woodcroft ae32c58e28
gnu: r-bsgenome: Update to 1.40.1.
* gnu/packages/bioinformatics.scm (r-bsgenome): Update to 1.40.1.
2016-07-28 21:35:40 +10:00
Ben Woodcroft e426cd7421
gnu: r-iranges: Update to 2.6.1.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.6.1.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 1c4ad6076c
gnu: r-limma: Update to 3.28.17.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.28.17.
2016-07-28 21:35:40 +10:00
Ben Woodcroft bd0cc37834
gnu: r-xvector: Update to 0.12.1.
* gnu/packages/bioinformatics.scm (r-xvector): Update to 0.12.1.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 362f39d667
gnu: r-genomicranges: Update to 1.24.2.
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.24.2.
2016-07-28 21:35:40 +10:00
Ben Woodcroft ae60f3801a
gnu: r-annotationdbi: Update to 1.34.4.
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.34.4.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 7a0594fb5d
gnu: r-biocparallel: Update to 1.6.3.
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.6.3.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 658f36e569
gnu: r-biostrings: Update to 2.40.2.
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.40.2.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 0d159d84e2
gnu: r-summarizedexperiment: Update to 1.2.3.
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.2.3.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 722b4c919d
gnu: r-genomicalignments: Update to 1.8.4.
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.8.4.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 380d3f8657
gnu: r-rtracklayer: Update to 1.32.2.
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.32.2.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 303163c7b9
gnu: r-genomeinfodb: Update to 1.8.3.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.8.3.
2016-07-28 21:35:40 +10:00
Ben Woodcroft 2d88825183
gnu: r-genomicfeatures: Update to 1.24.5.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.24.5.
2016-07-28 21:35:40 +10:00
Ben Woodcroft d6dfc39f68
gnu: r-s4vectors: Update to 0.10.2.
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.10.2.
2016-07-28 12:31:22 +02:00
Ben Woodcroft f2e791750b
gnu: r-s4vectors: Update to 0.10.2.
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.10.2.
2016-07-28 20:13:42 +10:00
Andreas Enge 4320c1c39f
gnu: asymptote: Add native input gs.
* gnu/packages/plotutils.scm (asymptote)[native-inputs]: Add gs.

This is a follow-up to commit d8eb912132.
2016-07-28 11:34:57 +02:00
Andreas Enge e309c75610
Merge remote-tracking branch 'origin/master' into core-updates 2016-07-28 11:08:55 +02:00
Leo Famulari e335b82c4e
gnu: mysql: Update to 5.7.13 [fixes CVE-2016-{3477,3521,3615,5440}].
* gnu/packages/patches/mysql-fix-failing-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/databases.scm (mysql): Update to 5.7.13.
2016-07-28 02:08:49 -04:00
Tomáš Čech 46e4e84ffc
gnu: the-silver-searcher: Update to 0.32.0.
* gnu/packages/code.scm(the-silver-searcher): Update to 0.32.0.
2016-07-28 08:05:04 +02:00
Leo Famulari 8e5d8b1880
gnu: imagemagick: Update to 6.9.5-3.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.5-3.
2016-07-27 23:25:13 -04:00
Leo Famulari ff7172feae
gnu: mariadb: Update to 10.1.16.
* gnu/packages/databases.scm (mariadb): Update to 10.1.16.
2016-07-27 23:25:08 -04:00
Ludovic Courtès 1bb163b0dd
gnu: python@2.7: Delete faulty test on mips64el only.
This amends 8b732bf6d9 and avoids a
rebuild.

* gnu/packages/python.scm (python-2.7)[arguments] <pre-check>:
When (%current-system) starts with "mips64el", delete
Lib/test/test_ctypes.py.
2016-07-28 00:58:40 +02:00
Alex Griffin b111bdb667
gnu: calibre: Update to 2.63.0.
* gnu/packages/ebook.scm (calibre): Update to 2.63.0.
[inputs]: Remove unnecessary imagemagick dependency.
[phases]: Use modify-phases.

* gnu/packages/patches/calibre-drop-unrar.patch: Update
for new version.

Signed-off-by: Roel Janssen <roel@gnu.org>
2016-07-27 23:45:16 +02:00
Carlos Sánchez de La Lama cad7e6abaf
system: Source /etc/environment before $HOME/.guix-profile/etc/profile.
* gnu/system.scm (operating-system-etc-service) <profile>: Move sourcing
of /etc/environment before that of $HOME/.guix-profile/etc/profile.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-27 23:08:20 +02:00
Andreas Enge 8b732bf6d9
gnu: python-2.7: Disable test failing on mips64el-linux.
* gnu/packages/python.scm (python-2.7)[source]: In a snippet, remove
an additional test that fails on mips64el-linux.
2016-07-27 18:24:12 +02:00
Ben Woodcroft 9712ef8d42
gnu: krona-tools: Update to 2.7.
* gnu/packages/web.scm (krona-tools): Update to 2.7.
[arguments]: Delete 'build' phase.  Install new scripts.
2016-07-27 23:39:56 +10:00
Ben Woodcroft 12c8f210ee
gnu: diamond: Update to 0.8.16.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.16.
2016-07-27 23:17:57 +10:00
Andreas Enge fd6830b3a6
gnu: guix: Update revision number in version.
This is a follow-up to commit 95af24a2f1.
Reported by Alex Kost <alezost@gmail.com>.
2016-07-27 15:16:17 +02:00
Andreas Enge 0072b3d3f2
gnu: skribilo: Add input ghostscript-gs.
* gnu/packages/engineering.scm (lout)[native-inputs]: Add ghostscript-gs.

This is a follow-up to commit d8eb912132.
2016-07-27 14:47:15 +02:00
Alex Griffin 46bd451520
gnu: magit: Fix rebase commands that require perl.
* gnu/packages/emacs.scm (magit)[inputs]: Add 'perl'.
[arguments]: Adjust 'patch-exec-paths' phase to make some rebase
commands find 'perl'.

Signed-off-by: Alex Kost <alezost@gmail.com>
2016-07-27 11:15:45 +03:00
Tobias Geerinckx-Rice 82ee141bab
gnu: Add httping.
* gnu/packages/networking.scm (httping): New variable.
2016-07-27 03:59:47 +02:00
Tobias Geerinckx-Rice 42ff54d5fa
gnu: Add missing copyright symbol.
* gnu/packages/networking.scm: Add missing "©" to header comments.
2016-07-27 03:59:47 +02:00
ng0 ae83dcf6ba
gnu: gmime: Remove 'gpg' to 'gpg2' substitution.
* gnu/packages/mail.scm (gmime)[arguments]: Remove the substitution which
previously changed 'gpg' to 'gpg2' in 'patch-paths-in-tests' phase.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-26 19:43:54 -04:00
Andreas Enge 5425269bf7
gnu: lout: Add input ghostscript.
* gnu/packages/lout.scm (lout)[native-inputs]: Add ghostscript, needed for ps2pdf.
2016-07-26 23:28:55 +02:00
Andreas Enge 02b934e2c6
gnu: lout: Make ghostscript-gs a native input.
* gnu/packages/lout.scm (lout)[inputs]: Move to native-inputs.
2016-07-26 23:09:01 +02:00
Andreas Enge 5ef469ce31
gnu: lout: Build with ghostscript-gs.
* gnu/packages/engineering.scm (lout)[inputs]: Replace GHOSTSCRIPT by
GHOSTSCRIPT-GS.

This is a follow-up to commit d8eb912132.
2016-07-26 23:08:00 +02:00
Andreas Enge d3896fc4ce
gnu: dmd: Remove package, superseded by shepherd.
* gnu/packages/admin.scm (dmd): Remove variable.
2016-07-26 22:50:26 +02:00
Danny Milosavljevic 90c2ee889b
gnu: Add perl-db-file.
* gnu/packages/databases.scm (perl-db_file): New variable.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2016-07-26 22:43:48 +02:00
Alex Griffin 88a8ce87a4
gnu: icecat: Install icons.
* gnu/packages/gnuzilla.scm (icecat)[arguments]: Add
'install-icons' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-26 14:53:16 +02:00
Tobias Geerinckx-Rice 2b76f13507
gnu: Add haveged.
* gnu/packages/linux.scm (haveged): New variable.
2016-07-26 11:20:52 +02:00
Tobias Geerinckx-Rice af7aaaebab
gnu: Add perceptualdiff.
* gnu/packages/image.scm (perceptualdiff): New variable.
2016-07-26 11:20:27 +02:00
Mark H Weaver ca80985c6c
gnu: linux-libre@4.1: Update to 4.1.28.
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.28.
2016-07-26 01:36:12 -04:00
Mark H Weaver de348a0bb7
gnu: linux-libre: Update to 4.7.
* gnu/packages/linux.scm (linux-libre): Update to 4.7.
* gnu/packages/linux-libre-4.7-x86_64.conf,
gnu/packages/linux-libre-4.7-i686.conf: New files.
* gnu/packages/linux-libre-4.6-x86_64.conf,
gnu/packages/linux-libre-4.6-i686.conf: Delete files.
* Makefile.am (KCONFIGS): Update accordingly.
2016-07-26 00:46:40 -04:00
Ludovic Courtès 5dbfbef729
gnu: lpsolve: Fix compilation issue.
Reported by Andreas Enge <andreas@enge.fr>
at <https://lists.gnu.org/archive/html/guix-devel/2016-07/msg01018.html>.

* gnu/packages/maths.scm (lpsolve)[source]: Augment 'snippet'.
2016-07-26 00:43:52 +02:00
Ludovic Courtès 6689d09457
gnu: lpsolve: Fail as early as possible.
* gnu/packages/maths.scm (lpsolve)[arguments]: In 'build' phase, check
the return value of 'system*' and honor it.
2016-07-26 00:43:52 +02:00
Andreas Enge 0e5f606159
gnu: calibre: Build with non-modular Qt.
* gnu/packages/ebook.scm (calibre)[native-inputs]: Replace QTBASE by QT.
[inputs]: Replace QTBASE by QT and PYTHON2-PYQT by PYTHON2-PYQT-5.5.

This essentially reverts commit 76806c54ed.

Reported by Roel Janssen <roel@gnu.org>.
2016-07-26 00:38:39 +02:00
Andreas Enge 4a8c35e143
gnu: pyqt: Add versions based on non-modular Qt 5.5.
* gnu/packages/qt.scm (python-pyqt-5.5, python2-pyqt-5.5): New variables.
2016-07-26 00:38:20 +02:00
Andreas Enge e83a13faa2
gnu: fastcap: Build with ghostscript-gs.
* gnu/packages/engineering.scm (fastcap)[native-inputs]: Replace GHOSTSCRIPT
by GHOST_SCRIPT-GS.

This is a follow-up to commit d8eb912132.
2016-07-25 23:59:47 +02:00
Andreas Enge 95af24a2f1
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 97c8aef.
2016-07-25 22:53:27 +02:00
Andreas Enge 97c8aef15d
system: Add mapped devices for RAID.
* gnu/system/mapped-devices.scm (raid-device-mapping, open-raid-device,
close-raid-device): New variables.
* doc/guix.texi (Mapped Devices): Add documentation for RAID devices,
reorganize documentation for LUKS devices.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-07-25 22:22:21 +02:00
Andreas Enge 14656f4495
Merge remote-tracking branch 'origin/master' into core-updates 2016-07-25 21:58:36 +02:00
Alex Kost 090bdb9e91
gnu: emacs-solarized-theme: Remove unneeded dependencies.
* gnu/packages/emacs.scm (emacs-solarized-theme)[propagated-inputs]:
Remove 'emacs-f' and 'emacs-s'.
2016-07-25 17:18:53 +03:00
Alex Kost c48899eba2
gnu: emacs: Install site-start.el in non-versioned directory.
Reported by Ricardo Wurmus on #guix.

* gnu/packages/emacs.scm (emacs)[arguments]: Put "site-start.el" in
"/share/emacs/site-lisp" instead of "/share/emacs/<version>/site-lisp"
to let inherited package with another version find it.
2016-07-25 17:18:53 +03:00
Alex Kost 07f7cc03ce
gnu: Add guile-daemon.
* gnu/packages/guile.scm (guile-daemon): New variable.
2016-07-25 17:18:53 +03:00
Alex Kost bd9af61035
gnu: Add guile-xosd.
* gnu/packages/guile.scm (guile-xosd): New variable.
2016-07-25 17:18:53 +03:00
Alex Kost 6cfd1a687a
gnu: Add xdpyprobe.
* gnu/packages/xdisorg.scm (xdpyprobe): New variable.
2016-07-25 17:18:53 +03:00
Alex Kost 84b5d9075c
gnu: mkfontdir: Do not propagate 'mkfontscale'.
* gnu/packages/xorg.scm (mkfontdir)[propagated-inputs]: Move
'mkfontscale' to ...
[inputs]: ... here.
[arguments]: Add 'wrap-mkfontdir' phase.
2016-07-25 17:18:52 +03:00
Alex Kost e48e31bcc8
gnu: Add xfd.
* gnu/packages/xorg.scm (xfd): New variable.
2016-07-25 17:18:52 +03:00
Alex Kost f225ae7544
gnu: Add xfontsel.
* gnu/packages/xorg.scm (xfontsel): New variable.
2016-07-25 17:18:52 +03:00
Andy Patterson 1925a87926
gnu: sbcl: Update to 1.3.7.
* gnu/packages/lisp.scm (sbcl): Update to 1.3.7.
[arguments]: During the patch-unix-tool-paths phase, avoid running
substitute* on a utf-16-be encoded file.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-07-25 19:50:13 +08:00
Ludovic Courtès d8eb912132
gnu: Use 'ghostscript-gs' in packages that need the 'gs' command.
Fixes a regression introduced in
eb354bdacb.

Reported by Andreas Enge <andreas@enge.fr>.

* gnu/packages/gv.scm (gv)[propagated-inputs]: Change from GHOSTSCRIPT/X
to GHOSTSCRIPT-GS/X.
* gnu/packages/music.scm (lilypond): Use GHOSTSCRIPT-GS instead of
GHOSTSCRIPT.
* gnu/packages/ocaml.scm (unison): Likewise.
* gnu/packages/plotutils.scm (asymptote): Likewise.
* gnu/packages/scheme.scm (chez-scheme): Likewise.
2016-07-25 11:37:43 +02:00
Ludovic Courtès 71eba3ebc1
gnu: Add 'ghostscript-gs' and 'ghostscript-gs-with-x'.
* gnu/packages/ghostscript.scm (ghostscript-wrapper): New procedure.
(ghostscript-gs, ghostscript-gs/x): New variables.
2016-07-25 11:36:51 +02:00
Andy Patterson 54a43ff406
gnu: ecl: Wrap with PATH, CPATH, LIBRARY_PATH, and LD_LIBRARY_PATH.
* gnu/packages/lisp.scm (ecl)[arguments]: Add 'wrap' phase.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-07-25 10:48:49 +02:00
Andy Patterson 60474cd114
gnu: ecl: Enable tests.
* gnu/packages/lisp.scm (ecl): Enable tests.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-25 10:48:49 +02:00
Andy Patterson e0524511ec
gnu: ecl: Update to 16.1.2.
* gnu/packages/lisp.scm (ecl): Update to 16.1.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-25 10:48:49 +02:00
Efraim Flashner 45477c6a7d
gnu: gnupg@2.1: Use 'modify-phases'.
* gnu/packages/gnupg.scm (gnupg@2.1)[arguments]: Use 'modify-phases'
syntax.
2016-07-25 00:18:15 +03:00
Efraim Flashner 35d28c6013
gnu: hdup: Update source url.
* gnu/packages/backup.scm (hdup)[source]: Update url.
2016-07-25 00:15:30 +03:00
Leo Famulari 163708a664
gnu: gnupg-2.1: Install executable as 'gpg'.
* gnu/packages/gnupg.scm (gnupg-2.1)[arguments]: Add '--enable-gpg2-is-gpg'
to #:configure-flags.
2016-07-24 17:09:40 -04:00
Ludovic Courtès bc85b127df
gnu: gnupg@2.0: Add the 'gpg' and 'gpgv' commands.
* gnu/packages/gnupg.scm (gnupg-2.0)[arguments]: Add
'rename-v2-commands' phase.
2016-07-24 22:18:45 +02:00
Efraim Flashner 80c47cf8e4
gnu: gnupg@2.0: Fix typo.
* gnu/packages/gnupg.scm (gnupg@2.0)[arguments]: Fix typo that prevented
gnupg from building.

This is a follow up to 6b547d2295.
2016-07-24 22:02:46 +03:00
Efraim Flashner 04c828c4fb
gnu: exiv2: Update source url.
* gnu/packages/geeqie.scm (exiv2)[source]: Update url.
2016-07-24 21:17:04 +03:00
Ludovic Courtès 6b547d2295
doc: gnupg@2.0: Use 'modify-phases'.
* gnu/packages/gnupg.scm (gnupg-2.0)[arguments]: Use 'modify-phases'.
2016-07-24 19:54:15 +02:00
Andreas Enge 1abdc167d3
Merge branch 'master' into core-updates 2016-07-24 18:42:56 +02:00
Andreas Enge a308c2339a
gnu: icecat: Disable parallel build.
* gnu/packages/gnuzilla.scm (icecat)[arguments]: Disable parallel build.
2016-07-24 18:40:46 +02:00
Andreas Enge 238e5642d4
gnu: icecat: Update to 38.8.0-gnu2.
* gnu/packages/gnuzilla.scm (icecat): Update to 38.8.0-gnu2.
2016-07-24 17:28:36 +02:00
Efraim Flashner d841a292b2
gnu: openssh: Fix CVE-2016-6210.
* gnu/packages/ssh.scm (openssh)[source]: Add patches
openssh-CVE-2016-6210-1.patch, openssh-CVE-2016-6210-2.patch,
openssh-CVE-2016-6210-3.patch.
* gnu/packages/patches/openssh-CVE-2016-6210-1.patch: New file.
* gnu/packages/patches/openssh-CVE-2016-6210-2.patch: New file.
* gnu/packages/patches/openssh-CVE-2016-6210-3.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register them.
2016-07-24 16:18:41 +03:00
Efraim Flashner df2c7563ff
gnu: pspp: Update to 0.10.2.
* gnu/packages/statistics.scm (pspp): Update to 0.10.2.
2016-07-24 15:43:35 +03:00
Efraim Flashner fe84bc9aba
gnu: python-iso8601: Update to 0.1.11.
* gnu/packages/python.scm (python-iso8601): Update to 0.1.11.
2016-07-24 15:43:34 +03:00
Efraim Flashner 2af56bfa1e
gnu: iniparser: Use 'modify-phases'.
* gnu/packages/samba.scm (iniparser)[arguments]: Use 'modify-phases'
syntax.
2016-07-24 15:43:34 +03:00
Efraim Flashner def8f501e6
gnu: iniparser: Update to 4.0.
* gnu/packages/samba.scm (iniparser): Update to 4.0.
[source]: Download from Github.
[arguments]: Define 'gcc' in Makefiles.
2016-07-24 15:43:33 +03:00
Efraim Flashner f0e8d85e17
gnu: python-waf: Update to 1.9.1.
* gnu/packages/python.scm (python-waf): Update to 1.9.1.
2016-07-24 15:43:33 +03:00
Efraim Flashner f0b8d83a77
gnu: mpv: Use packaged waf.
* gnu/packages/video.scm (mpv)[inputs]: Remove externally downloaded waf
package and use packaged python-waf.
2016-07-24 15:43:32 +03:00
Andreas Enge 8ebdf9afd6
gnu: wxwidgets: Update source URL.
* gnu/packages/wxwidgets.scm (wxwidgets, wxwidgets-2): Update source URL.
2016-07-24 10:36:54 +02:00
Leo Famulari d5f335eedb
gnu: git: Update to 2.9.2.
* gnu/packages/version-control.scm (git): Update to 2.9.2.
(git-manpages)[source]: Update hash.
2016-07-24 03:49:10 -04:00
Ricardo Wurmus 6af691723e
gnu: icedtea-6: Narrow file to certificate block.
* gnu/packages/java.scm (icedtea-6)[arguments]: Extract certificate
  blocks from pem files before importing.
2016-07-24 09:41:57 +02:00
ng0 578aeea6cd
gnu: perl-io-socket-ssl: Add IDN support.
* gnu/packages/web.scm (perl-io-socket-ssl)[propagated-inputs]: Add perl-uri
for IDN support.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-07-24 09:36:42 +03:00
ng0 73020459b3
gnu: perl-io-socket-ssl: Update to 2.033.
* gnu/packages/web.scm (perl-io-socket-ssl): Update to 2.033.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-07-24 09:36:42 +03:00
Efraim Flashner 763a17ba62
gnu: parallel: Update to 20160722.
* gnu/packages/parallel.scm (parallel): Update to 20160722.
2016-07-24 09:36:42 +03:00
Efraim Flashner fad51a1837
gnu: hplip: Update to 3.16.7.
* gnu/packages/cups.scm (hplip): Update to 3.16.7.
2016-07-24 09:35:58 +03:00
Efraim Flashner 7531b1fc4d
gnu: ghc-memory: Update to 0.13.
* gnu/packages/haskell.scm (ghc-memory): Update to 0.13.
2016-07-24 09:35:58 +03:00
Alex Griffin 92c2f6055d
gnu: Add trash-cli.
* gnu/packages/shellutils.scm (trash-cli): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-23 20:34:31 -04:00
Andreas Enge 2a69d4df7d
gnu: youtube-dl: Update to 2016.07.22.
* gnu/packages/video.scm (youtube-dl): Update to 2016.07.22.
2016-07-24 00:11:15 +02:00
Efraim Flashner a4ea25d347
gnu: offlineimap: Update to 7.0.0.
* gnu/packages/mail.scm (offlineimap): Update to 7.0.0.
[inputs]: Add python2-six.
[native-inputs]: Remove python2.
2016-07-24 00:30:02 +03:00
Andreas Enge a000f3c4a8
gnu: cook: Update source URL.
* gnu/packages/cook.scm (cook)[source]: Update URL.
2016-07-23 22:19:11 +02:00
Andreas Enge fe7fa35320
gnu: bitcoin-core: Build with bdb-5.3.
* gnu/packages/finance.scm (bitcoin-core)[inputs]: Replace bdb by bdb-5.3.
2016-07-23 20:19:58 +02:00
Tobias Geerinckx-Rice 6a3987b1ae
gnu: fish: Update to 2.3.1.
* gnu/packages/fish.scm (fish): Update to 2.3.1.
[home-page, source]: Use 'https' in the URL.
2016-07-23 20:18:14 +02:00
Tobias Geerinckx-Rice 389eb3fab7
gnu: Add lrzip.
* gnu/packages/compression.scm (lrzip): New variable.
2016-07-23 20:18:14 +02:00
ng0 f75f261f55
gnu: libepoxy: Update to 1.3.1.
* gnu/packages/gl.scm (libepoxy): Update to 1.3.1.

Signed-off-by: Andreas Enge <andreas@enge.fr>
2016-07-23 12:56:08 +02:00
Ben Woodcroft e03a515304
gnu: fasttree: Update to 2.1.9.
* gnu/packages/bioinformatics.scm (fasttree): Update to 2.1.9.
2016-07-23 15:15:12 +10:00
Leo Famulari d227260d2f
Merge branch 'master' into core-updates
Resolved conflicts:
* gnu/packages/scheme.scm: Conflict in import of (guix licenses). On master,
"#:hide (openssl)" was used. On core-updates, "#:select (some licenses)" was
used. The latter won the conflict.
* gnu/packages/version-control.scm (git)[arguments]: Whitespace conflict
in 'install-shell-completion.
2016-07-22 18:58:31 -04:00
Leo Famulari d778fa5ff6
gnu: mozjs: Disable parallel build.
* gnu/packages/gnuzilla.scm (mozjs)[arguments]: Add
'#:parallel-build? #f'.
2016-07-22 17:44:31 -04:00
Alex Griffin 26ad4adb55
gnu: wesnoth: Update to 1.12.6.
* gnu/packages/games.scm (wesnoth): Update to 1.12.6.
2016-07-22 16:12:16 -04:00
Leo Famulari eddf9ae95e
gnu: opus: Update to 1.1.3.
* gnu/packages/xiph.scm (opus): Update to 1.1.3.
2016-07-22 14:02:13 -04:00
Leo Famulari 0f971a0475
gnu: Update URLs for sourceforge.net.
* gnu/packages/audio.scm: Update URLs pointing to sourceforge.net.
* gnu/packages/fonts.scm: Likewise.
* gnu/packages/gl.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/image.scm: Likewise.
* gnu/packages/lxde.scm: Likewise.
* gnu/packages/slim.scm: Likewise.
* gnu/packages/textutils.scm: Likewise.
2016-07-22 11:47:12 -04:00
Efraim Flashner 8ef843c711
gnu: aegis: Use 'modify-phases'.
* gnu/packages/version-control.scm (aegis)[arguments]: Use 'modify-phases'.
2016-07-22 18:24:22 +03:00
Efraim Flashner 2ce516d359
gnu: git: Use 'modify-phases'.
* gnu/packages/version-control.scm (git)[arguments]: Use 'modify-phases'.
2016-07-22 18:24:22 +03:00
Efraim Flashner bf3c57ff2d
gnu: cssc: Use 'modify-phases'.
* gnu/packages/version-control.scm (cssc)[arguments]: Use 'modify-phases'.
2016-07-22 18:24:22 +03:00
Efraim Flashner 7c5a145414
gnu: subversion: Use 'modify-phases'.
* gnu/packages/version-control.scm (subversion)[arguments]: Use
'modify-phases'.
2016-07-22 18:24:22 +03:00
Efraim Flashner ce84c924ac
gnu: subversion: Use https.
* gnu/packages/version-control.scm (subversion)[source]: Use https.
[home-page]: Use https.
2016-07-22 18:24:22 +03:00
Efraim Flashner aac42d7885
gnu: git-flow: Use 'modify-phases'.
* gnu/packages/version-control.scm (git-flow)[arguments]: Use
'modify-phases'.
2016-07-22 18:24:22 +03:00
Efraim Flashner 430e67a459
gnu: gnuplot: Update to upstream's re-release of 5.0.4.
* gnu/packages/maths.scm (gnuplot): Add a guix revision number to the
version scheme of gnuplot to force an update.
2016-07-22 18:24:22 +03:00
Efraim Flashner 18d4d10f34
gnu: enlightenment: Update to 0.21.1.
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.21.1.
2016-07-22 18:24:22 +03:00
Efraim Flashner 730c740e43
gnu: bazaar: Use 'modify-phases'.
* gnu/packages/version-control.scm (bazaar)[arguments]: Use
'modify-phases'.
2016-07-22 18:24:22 +03:00
Ricardo Wurmus f21403e2b6 gnu: icedtea-6: Generate keystore.
* gnu/packages/java.scm (icedtea-6)[arguments]: Add phase
"install-keystore".
[native-inputs]: Add nss-certs.
2016-07-22 17:10:25 +02:00
Ricardo Wurmus 9bc84dfea9 gnu: icedtea-6: Use modify-phases syntax.
* gnu/packages/java.scm (icedtea-6)[arguments]: Use modify-phases
  syntax.
2016-07-22 17:10:11 +02:00
Ricardo Wurmus 745ad37a78 gnu: nss-certs: Stop inheriting from nss package.
* gnu/packages/certs.scm (nss-certs): Stop inheriting from nss package.
2016-07-22 17:10:11 +02:00
Danny Milosavljevic c2f0dc6ed1
gnu: Add ptpython and ptpython2.
* gnu/packages/python.scm (ptpython, ptpython-2): New variables.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-07-22 15:06:05 +02:00
宋文武 782170c4f5
gnu: racket: Add more inputs.
* gnu/packages/scheme.scm (racket)[inputs]: Add glu, gmp, libpng, libx11,
mesa, mpfr, openssl and unixodbc.  Replace libjpeg-8 with libjpeg and
gtk+-2 with gtk+.
2016-07-22 19:09:20 +08:00
宋文武 e8c6811bf1
gnu: racket: Patch dynamically loaded libraries with absolute paths.
* gnu/packages/scheme.scm (racket)[arguments]: Patch 'ffi-lib' calls to
absolute paths in 'pre-configure' phase.  Remove 'wrap-programs' phase.
2016-07-22 19:09:11 +08:00
Daniel Pimentel 8d63dddac1
gnu: Add python-protobuf.
* gnu/packages/protobuf.scm (python-protobuf, python2-protobuf): New variables.

Co-authored-by: Leo Famulari <leo@famulari.name>
2016-07-22 02:22:49 -04:00
Leo Famulari d7cff656df
gnu: muparser: Update source URL.
* gnu/packages/maths.scm (muparser)[source]: Update source URL to new location.
Use URL-FETCH instead of SVN-FETCH. Update hash and package revision.
2016-07-21 18:25:20 -04:00
Leo Famulari de67e92288
gnu: Update URLs for sourceforge.net.
* gnu/packages/admin.scm: Update URLs pointing to sourceforge.net.
* gnu/packages/audacity.scm: Likewise.
* gnu/packages/audio.scm: Likewise.
* gnu/packages/bioinformatics.scm: Likewise.
* gnu/packages/boost.scm: Likewise.
* gnu/packages/cdrom.scm: Likewise.
* gnu/packages/code.scm: Likewise.
* gnu/packages/compression.scm: Likewise.
* gnu/packages/cups.scm: Likewise.
* gnu/packages/djvu.scm: Likewise.
* gnu/packages/docbook.scm: Likewise.
* gnu/packages/documentation.scm: Likewise.
* gnu/packages/flashing-tools.scm: Likewise.
* gnu/packages/fonts.scm: Likewise.
* gnu/packages/fontutils.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/ghostscript.scm: Likewise.
* gnu/packages/gl.scm: Likewise.
* gnu/packages/gnucash.scm: Likewise.
* gnu/packages/graphviz.scm: Likewise.
* gnu/packages/image.scm: Likewise.
* gnu/packages/libreoffice.scm: Likewise.
* gnu/packages/libusb.scm: Likewise.
* gnu/packages/linux.scm: Likewise.
* gnu/packages/lirc.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/mcrypt.scm: Likewise.
* gnu/packages/mp3.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/networking.scm: Likewise.
* gnu/packages/onc-rpc.scm: Likewise.
* gnu/packages/password-utils.scm: Likewise.
* gnu/packages/pdf.scm: Likewise.
* gnu/packages/perl.scm: Likewise.
* gnu/packages/photo.scm: Likewise.
* gnu/packages/popt.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/rdesktop.scm: Likewise.
* gnu/packages/screen.scm: Likewise.
* gnu/packages/swig.scm: Likewise.
* gnu/packages/tcl.scm: Likewise.
* gnu/packages/version-control.scm: Likewise.
* gnu/packages/video.scm: Likewise.
* gnu/packages/w3m.scm: Likewise.
* gnu/packages/web.scm: Likewise.
* gnu/packages/wm.scm: Likewise.
* gnu/packages/xdisorg.scm: Likewise.
* gnu/packages/xml.scm: Likewise.
2016-07-21 18:09:40 -04:00
Kei Kebreau a205d3f991
gnu: Add hexedit.
* gnu/packages/hexedit: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-07-21 14:06:05 -04:00
Tomáš Čech 24e964314e
services: Export *-service-type and *-configuration.
This allows users to use 'modify-services' and similar constructs for
all these service types.

* gnu/services/avahi.scm: export avahi-configuration.
* gnu/services/base.scm: export gpm-configuration and
rngd-configuration.
* gnu/services/databases.scm: export *-service-type and *-configuration.
* gnu/services/dbus.scm: export dbus-configuration.
* gnu/services/dict.scm: export dicod-service-type.
* gnu/services/lirc.scm: export lirc-configuration and
lirc-service-type.
* gnu/services/mail.scm: export dovecot-service-type.
* gnu/services/web.scm: export nginx-configuration and
nginx-service-type.
* gnu/services/xorg.scm: export screen-locker and screen-locker?.
* gnu/services/ssh.scm: export lsh-configuration and lsh-service-type.
* gnu/services/desktop.scm: export *-service, *-service-type
and *-configuration.
* gnu/services/networking.scm: export *-configuration
and *-service-type.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-07-21 18:53:27 +02:00
Efraim Flashner 427dda54f2
gnu: tesseract-ocr: Update to 3.04.01.
* gnu/packages/ocr.scm (tesseract-ocr): Update to 3.04.01.
[source]: Download from Github, add 'file-name' field, remove snippet.
[native-inputs]: Remove autoconf, automake, libtool.
[propagated-inputs]: Move leptonica ...
[inputs]: ... to here.
[arguments]: Remove 'autogen phase.
[home-page]: Move program's home-page to Github.
2016-07-21 17:18:42 +03:00
Efraim Flashner a9c64810cd
gnu: gnuplot: Update to 5.0.4.
* gnu/packages/maths.scm (gnuplot): Update to 5.0.4.
2016-07-21 13:56:51 +03:00
Efraim Flashner 873966e3e9
gnu: dovecot: Update to 2.2.25.
* gnu/packages/mail.scm (dovecot): Update to 2.2.25.
2016-07-21 13:56:13 +03:00
Efraim Flashner 132e14b4cc
gnu: texlive: Use https.
* gnu/packages/tex.scm (texlive-bin, texlive-texmf, texlive)[license]:
Use 'https' in the url.
[home-page]: Use 'https' in the url.
2016-07-21 12:56:17 +03:00
Efraim Flashner 29a56d8eaf
gnu: texlive: Update in-place source updates.
* gnu/packages/tex.scm (texlive-texmf-source, texlive-bin)[source]:
Update to 20160523b.
2016-07-21 12:46:12 +03:00
Leo Famulari d23d1ddf6e
gnu: msmtp: Update to 1.6.5.
* gnu/packages/mail.scm (msmtp): Update to 1.6.5.
[source]: Update source URL.
2016-07-21 01:43:01 -04:00
Eric Bavier 2908087013
gnu: superlu-dist: Remove non-free source.
* gnu/packages/maths.scm (superlu-dist)[source]: Replace non-free
mc64ad.c source with stub.
2016-07-20 21:16:25 -05:00
Eric Bavier 8787c555d9
gnu: slepc: Update to 3.7.1.
* gnu/packages/maths.scm (slepc): Update to 3.7.1.
2016-07-20 21:16:25 -05:00
Eric Bavier fafd623e49
gnu: petsc: Update to 3.7.2.
* gnu/packages/maths.scm (petsc): Update to 3.7.2.
[arguments]: Adjust scrubbed files.
2016-07-20 21:16:24 -05:00
Eric Bavier b730b43770
gnu: petsc: Make header generation reproducible.
* gnu/packages/maths.scm (petsc)[arguments]: Scrub timestamp from
  petscmachineinfo.h header.
2016-07-20 21:16:24 -05:00
Eric Bavier 64dcc28963
gnu: petsc: Use modify-phases.
* gnu/packages/maths.scm (petsc)[arguments]: Use modify-phases.
2016-07-20 21:16:24 -05:00
Eric Bavier 9474a4b3ec
gnu: openmpi: Make binaries reproducible.
* gnu/packages/mpi.scm (openmpi)[arguments]: Remove timestamps from
source files.  Delete installed configure logs.
2016-07-20 21:16:24 -05:00
Eric Bavier 6876590fd4
gnu: openmpi: Update to 1.10.3.
* gnu/packages/mpi.scm (openmpi): Update to 1.10.3.
[source]: Use https.
2016-07-20 21:15:37 -05:00
Eric Bavier 995a09e055
gnu: superlu: Update to 5.2.1.
* gnu/packages/maths.scm (superlu): Update to 5.2.1.
[source]: Remove non-free MC64 code.
[inputs]: Use openblas instead of lapack's BLAS.
[build-system]: Use cmake-build-system.
[arguments]: Remove custom phases and replace with CMake flags.
[license]: List additional licenses for some source and example files.
2016-07-20 18:31:16 -05:00
Eric Bavier d721c83a63
gnu: Add libhilbert.
* gnu/packages/maths.scm (libhilbert): New variable.
2016-07-20 18:31:16 -05:00
Ricardo Wurmus cdf8f39195
gnu: Add allegro-5.0.
* gnu/packages/game-development.scm (allegro-5.0): New variable.
2016-07-20 22:19:34 +02:00
Ricardo Wurmus 19d311b4f2
gnu: Add allegro.
* gnu/packages/game-development.scm (allegro): New variable.
2016-07-20 22:19:34 +02:00
Ludovic Courtès 7575655212
Merge branch 'master' into core-updates 2016-07-20 11:42:17 +02:00
Efraim Flashner 5f01078129
gnu: julia: Build with zlib.
* gnu/packages/julia.scm (julia)[inputs]: Add zlib.
2016-07-20 11:37:01 +03:00
Efraim Flashner c23c628ea7
Revert "gnu: julia: Build with zlib."
This reverts commit 95bf72eeb0.
2016-07-20 11:37:01 +03:00
Efraim Flashner 95bf72eeb0
gnu: julia: Build with zlib.
* gnu/packages/julia.scm (julia)[inputs]: Add zlib.
2016-07-20 09:11:16 +03:00
Leo Famulari 5d4c90ae02
gnu: gnutls: Update to 3.5.2.
* gnu/packages/tls.scm (gnutls): Update to 3.5.2.
[native-inputs]: Add net-tools.
2016-07-20 00:01:39 -04:00
Efraim Flashner 885fa1eec5
gnu: aria2: Update to 1.25.0.
* gnu/packages/bittorrent.scm (aria2): Update to 1.25.0.
2016-07-20 06:49:44 +03:00
Ricardo Wurmus 909147e43f
services: Add pam-limits-service.
* gnu/system/pam.scm (<pam-limits-entry>): New record type.
(pam-limits-entry, pam-limits-entry->string): New procedures.
* gnu/services/base.scm (pam-limits-service-type): New variable.
(pam-limits-service): New procedure.
* doc/guix.texi (Base Services): Document it.
2016-07-19 23:50:03 +02:00
Ludovic Courtès 8e9ba611cb
gnu: atlas: Use @example in description.
* gnu/packages/maths.scm (atlas)[description]: Use "@example".
2016-07-19 23:03:30 +02:00
Tobias Geerinckx-Rice d97c429a34
gnu: atlas: Use cpupower in description.
* gnu/packages/maths.scm (atlas)[description]: Replace 'cpufreq-selector'
with its replacement 'cpupower --governor'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
Tobias Geerinckx-Rice 58d6a1f227
gnu: Add cpupower.
* gnu/packages/linux.scm (cpupower): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
Tobias Geerinckx-Rice 592ccdd388
gnu: Add ssdeep.
* gnu/packages/datastructures.scm (ssdeep): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
David Craven 7fe3f8cf6e
gnu: mesa-utils: Update to 8.3.0.
* gnu/packages/gl.scm (mesa-utils): Update to 8.3.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
David Craven 3a92a5b36d
gnu: Order module imports in (gnu packages gl) alphabetically.
* gnu/packages/gl.scm: Order module imports alphabetically.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
David Craven 584f2e1bc1
gnu: gl: Change 'l:' prefix to 'license:'.
* gnu/packages/gl.scm: Change #:prefix l: to #:prefix license:.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-07-19 23:03:30 +02:00
Efraim Flashner aab76e80d2
gnu: python-pyquery: Update to 1.2.13.
* gnu/packages/python.scm (python-pyquery): Update to 1.2.13.
2016-07-19 21:07:37 +03:00
Efraim Flashner d5ccd9abf6
gnu: python-cssselect: Update to 0.9.2.
* gnu/packages/python.scm (python-cssselect): Update to 0.9.2.
[source]: Use 'pypi-uri' format.
2016-07-19 21:03:31 +03:00
Efraim Flashner 58d1d816ba
gnu: python2-cssutils: Update to 1.0.1.
* gnu/packages/python.scm (python2-cssutils): Update to 1.0.1.
[source]: Use 'pypi-uri' format.
2016-07-19 21:00:52 +03:00
Efraim Flashner 31e8a074c7
gnu: calibre: Update to 2.62.0.
* gnu/packages/ebook.scm (calibre): Update to 2.62.0.
2016-07-19 20:47:25 +03:00
Efraim Flashner d58a32037e
gnu: python-lxml: Update to 3.6.0.
* gnu/packages/python.scm (python-lxml): Update to 3.6.0.
2016-07-19 20:11:32 +03:00
ng0 72fb1b24d9
gnu: Use HTTPS home-page URLs for PGP-related packages.
* gnu/packages/gnupg.scm (gnupg, gpgme, libassuan, libgcrypt, libgpg-error,
libksba, npth, pius, python-gnupg, signing-party)[home-page]: Use HTTPS URLs.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-18 23:48:42 -04:00
ng0 f04a7943f4
gnu: libassuan: Update to 2.4.3.
* gnu/packages/gnupg.scm (libassuan): Update to 2.4.3.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-07-18 23:46:32 -04:00