This is the last bit fixing <https://bugs.gnu.org/35283>.
Previously, 'mformat' (used by 'grub-mkrescue') would pass uninitialized
bytes to write(2), leading to non-deterministic FAT image contents.
This patch fixes that.
* gnu/packages/patches/mtools-mformat-uninitialized.patch: New file.
* gnu/packages/mtools.scm (mtools)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/grub-efi-fat-serial-number.patch: New file.
* gnu/packages/bootloaders.scm (grub)[source](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
This file name was too long for 'tar', as reported by 'guix lint'.
* gnu/packages/patches/linkchecker-mark-more-tests-that-require-the-network.patch:
Rename to...
* gnu/packages/patches/linkchecker-tests-require-network.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/web.scm (linkchecker)[source]: Likewise.
This file name was too long for 'tar', as reported by 'guix lint'.
* gnu/packages/patches/ocaml-dose3-Add-unix-as-dependency-to-dose3.common-in-META.in.patch:
Rename to...
* gnu/packages/patches/ocaml-dose3-add-unix-dependency.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/ocaml.scm (ocaml-dose3)[source]: Adjust accordingly.
* gnu/packages/patches/idris-test-no-node.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/idris.scm (idris)[origin]: Use it.
[native-inputs]: New field.
[arguments]: Remove "#:tests? #f". Add custom 'check' phase after 'install'.
* gnu/packages/ghostscript.scm (lcms)[replacement]: New field.
(lcms/fixed): New variable.
* gnu/packages/patches/lcms-CVE-2018-16435.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/freedesktop.scm (localed): New variable.
* gnu/packages/patches/localed-xorg-keyboard.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xiph.scm (flac)[replacement]: New field.
(flac/fixed): New variable.
* gnu/packages/patches/flac-CVE-2017-6888.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
The patch applies but has been unnecessary since 3.1.2.
* gnu/packages/finance.scm (ledger): Update to 3.1.3.
[source]: Remove obsolete patch.
* gnu/packages/patches/ledger-fix-uninitialized.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/xiph.scm (flac)[replacement]: New field.
(flac/fixed): New variable.
* gnu/packages/patches/flac-CVE-2017-6888.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/patches/ntfs-3g-CVE-2019-9755.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (ntfs-3g)[source]: Use it.
The merge preceding this commit ignored the replacement part of commit
bc91562939. This commit removes the remaining
bits, as the patch is already included in GTK3 since version 3.24.3.
* gnu/packages/patches/gtk3-fix-deprecation-macro-use.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gtk.scm (gtk+/fixed): Remove variable.
Fixes <https://bugs.gnu.org/34454>.
* gnu/packages/patches/gtk3-fix-deprecation-macro-use.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gtk.scm (gtk+/fixed): New variable.
(gtk+)[replacement]: New field.
The origin disappeared, and the new revision does not include all the Poppler
fixes. Adjust the package to take Arch's Poppler patches instead.
* gnu/packages/patches/texlive-bin-CVE-2018-17407.patch: New file.
* gnu/packages/patches/texlive-bin-pdftex-poppler-compat.patch,
gnu/packages/patches/texlive-bin-xetex-poppler-compat.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/tex.scm (texlive-bin)[source](patches): Likewise.
[arguments]: Likewise.
Fixes <https://bugs.gnu.org/34333>.
Reported by Allan Adair <allan@adair.io>.
* gnu/packages/patches/docker-use-fewer-modprobes.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/docker.scm (docker)[source]: Use it.
* gnu/packages/patches/libgit2-avoid-python.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/version-control.scm (libgit2)[source]: Use it.
[inputs]: Remove python.
[native-inputs]: Add guile-2.2.
* gnu/packages/elixir.scm (elixir): Update to 1.8.1.
[source](patches): New field.
[home-page]: Use HTTPS.
* gnu/packages/patches/elixir-path-length.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
Fixes <https://bugs.gnu.org/33882>.
* gnu/packages/graphics.scm (blender-2.79): New variable.
(blender)[description]: Remove obsolete claim that the stable
release no longer works in Guix.
* gnu/packages/patches/blender-2.79-newer-ffmpeg.patch,
gnu/packages/patches/blender-2.79-python-3.7-fix.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/algebra.scm (python-flint): New variable.
* gnu/packages/patches/python-flint-includes.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register the patch.
* gnu/packages/patches/pugixml-versioned-libdir.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/xml.scm (pugixml)[source](patches): New field.
[arguments]: Instruct the build system to create a shared rather than static
library.
[native-inputs]: Add PKG-CONFIG.
* gnu/packages/tls.scm (openssl)[replacement]: New field.
(openssl/fixed): New variable.
(openssl-next)[inherit]: Inherit from it instead.
* gnu/packages/patches/openssl-CVE-2019-1559.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/music.scm (musescore): Update to 3.0.3.
[source]: Remove now obsolete patch.
[arguments]: Do not use bundled (as a submodule) libcrashreporter-qt.
* gnu/packages/patches/musescore-fix-use_webengine.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Apply file removal.
* gnu/packages/multiprecision.scm (libtommath): New variable.
* gnu/packages/patches/libtommath.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/patches/clang-7.0-libc-search-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 7.0.1.
(llvm-7.0.1): Remove variable.
(clang-from-llvm)[arguments]: Adjust phase to match Clang 7.
(llvm-6, clang-runtime-6, clang-6): New public variables.
* gnu/packages/dlang.scm (ldc)[native-inputs]: Change LLVM and CLANG to
LLVM-6.0 and CLANG-6.0.
* gnu/packages/gl.scm (mesa)[inputs]: Change from LLVM to LLVM-6.
Patch ruby-safe-yaml to fix an issue that would lead to an error like this:
uninitialized constant SafeYAML::Parse::Date::DateTime
It's been reported upstream [1], and this patch was taken from the upstream Git
repository.
1: https://github.com/dtao/safe_yaml/issues/80
* gnu/packages/ruby.scm (ruby-safe-yaml)[source]: Switch to the Git repository
so that applying patches works and add a patch.
[arguments]: Enable tests and add a phase to set the TZ environment variable,
as one of the tests depends on a certian timezone.
* gnu/packages/patches/ruby-safe-yaml-add-require-time.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add new patch file.
* gnu/packages/patches/dealii-mpi-deprecations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (dealii)[source]: Upgrade to 9.0.1. Use patch.
[arguments]: Use new MPI configuration flags.
* gnu/packages/patches/scalapack-blacs-mpi-deprecations.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/maths.scm (scalapack)[source]: Use it.
macro compiler plugin.
* gnu/packages/patches/mrustc-0.8.0-fix-variable-length-integer-receiving.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (mrustc)[source]: Use it.
Co-authored-by: Chris Marusich <cmmarusich@gmail.com>
Add a patch from the upstream repository [1] that resolves some errors that
prevent the package from building [2].
1: https://github.com/red-eclipse/base/commit/b16b4963c1ad81bb9ef784bc49
2: error: ‘____gammal_r_finite’ was not declared in this scope
* gnu/packages/games.scm (red-eclipse)[source] Add patch.
* gnu/packages/patches/red-eclipse-remove-gamma-name-hack.patch: New file
* gnu/local.mk (dist_patch_DATA): Add new patch.
* gnu/packages/virtualization.scm (runc): Update to 1.0.0-rc6.
[source]: Use a descriptive file-name. Add 'runc-CVE-2019-5736.patch'
* gnu/packages/patches/runc-CVE-2019-5736.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
Chris Marusich