Commit Graph

14425 Commits

Author SHA1 Message Date
Marius Bakke 7d7ea947f5
gnu: sed: Update to 4.3.
* gnu/packages/base.scm (sed): Update to 4.3.
[source]: Use xz tarball. Remove upstreamed patch.
[arguments]: Fix '/bin/sh' -> 'bash' substitution.
[home-page]: Use https.
[native-inputs]: Add perl.
* gnu/packages/patches/sed-hurd-path-max.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-01-05 15:21:23 +01:00
José Miguel Sánchez García abe2ec735f
gnu: Add beep.
* gnu/packages/terminals.scm (beep): New variable.

Co-authored-by: Tobias Geerinckx-Rice <me@tobias.gr>
2017-01-05 13:09:19 +01:00
Tobias Geerinckx-Rice 88a46c9812
gnu: Remove unused module import from (gnu packages mtools).
This is a follow-up to commit 3b0f2ba46b.

* gnu/packages/mtools.scm: Remove import of (gnu packages python).
2017-01-05 13:09:19 +01:00
Ben Woodcroft 19e5fb6030
gnu: ruby-nokogiri: Update to 1.7.0.1.
* gnu/packages/ruby.scm (ruby-nokogiri): Update to 1.7.0.1.
2017-01-05 21:00:51 +10:00
Ben Woodcroft 8e941f2068
gnu: ruby-hoe: Update to 3.16.0.
* gnu/packages/ruby.scm (ruby-hoe): Update to 3.16.0.
2017-01-05 20:52:22 +10:00
Carlos Sánchez de La Lama 4a6f099e2c
gnu: bootstrap: Add the dynamic linker name for "powerpc-linux".
This commit completes cross-compilation support for powerpc-linux-gnu.

* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add "powerpc-linux"
case.
2017-01-04 23:57:30 +01:00
Carlos Sánchez de La Lama 440a3143f0
gnu: linux-libre: Adjust for PowerPC.
* gnu/packages/linux.scm (system->defconfig): New procedure.
(linux-libre-headers)[arguments]: Use it in 'build' phase to determine
the target name.
* gnu/packages/cross-base.scm (cross-kernel-headers)[xlinux-headers]
(arguments): Likewise.
2017-01-04 23:57:05 +01:00
Carlos Sánchez de La Lama fc649d0aad
gnu: gcc: Adjust for PowerPC.
* gnu/packages/gcc.scm (gcc-4.7)[arguments]: Add powerpc specific
substitutions for dynamic linker and start files locations in
'pre-configure' phase.
* gnu/packages/make-bootstrap.scm (%gcc-static)[arguments]: Add
"gcc/config/rs6000/sysv4.h" to the list of files in 'remove-lgcc_s'
phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-04 23:55:36 +01:00
Leo Famulari 5f0fabec54
gnu: unrtf: Fix CVE-2016-10091.
* gnu/packages/patches/unrtf-CVE-2016-10091.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/unrtf.scm (unrtf)[source]: Use it.
2017-01-04 14:42:58 -05:00
Alex Griffin 7a203059d3
gnu: libreoffice: Update to 5.1.6.2.
* gnu/packages/libreoffice.scm (libreoffice): Update to 5.1.6.2.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-04 14:37:58 -05:00
David Craven 3dcaa1226d
gnu: ocamlmod: Enable tests.
Followup to 93eeadf022.

* gnu/packages/ocaml.scm (ocamlmod)[arguments]: Enable tests.

Problem reported by Julien Lepiller <julien@lepiller.eu>.
2017-01-04 19:10:01 +01:00
David Craven 337273e41f
gnu: ocaml-ounit: Enable tests.
Followup to 7a76b4afd0.

* gnu/packages/ocaml.scm (ocaml-ounit)[arguments]: Enable tests.

Problem reported by Julien Lepiller <julien@lepiller.eu>.
2017-01-04 19:10:00 +01:00
Efraim Flashner 9c64f76e8a
gnu: aria2: Update to 1.30.0.
* gnu/packages/bittorrent.scm (aria2): Update to 1.30.0.
2017-01-04 19:15:00 +02:00
Ricardo Wurmus 68f9067324
gnu: inkscape: Update to 0.92.0.
* gnu/packages/patches/inkscape-drop-wait-for-targets.patch: Remove it.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/inkscape.scm (inkscape): Update to 0.92.0.
[build-system]: Use "cmake-build-system".
[native-inputs]: Add glib:bin.
[arguments]: Remove obsolete arguments; disable tests.
2017-01-04 18:06:44 +01:00
Julien Lepiller 6548e53fcb
gnu: Add ocaml-cmdliner.
* gnu/packages/ocaml.scm (ocaml-cmdliner): New variable.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 17:41:11 +01:00
Julien Lepiller eb1ba73185
gnu: Add ocaml-mtime.
* gnu/packages/ocaml.scm (ocaml-mtime): New variable.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 17:41:11 +01:00
Julien Lepiller 63147e5e1e
gnu: Add ocaml-rresult.
* gnu/packages/ocaml.scm (ocaml-rresult): New variable.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 17:41:11 +01:00
Julien Lepiller a359c7277c
gnu: Add ocaml-topkg.
* gnu/packages/ocaml.scm (ocaml-topkg): New variable.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 17:41:11 +01:00
Julien Lepiller 704b990c36
gnu: Add ocaml-result.
* gnu/packages/ocaml.scm (ocaml-result): New variable.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 17:41:11 +01:00
Julien Lepiller 44c23cb8d8
gnu: Add ocaml-bitstring.
* gnu/packages/ocaml.scm (ocaml-bitstring): New variable.
* gnu/packages/patches/ocaml-bitstring-fix-configure.patch: New file.
* gnu/local.mk (dist_patch_DATA): New patch.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 17:41:11 +01:00
Julien Lepiller a5b5bd1d18
gnu: Add ocaml-bisect.
* gnu/packages/ocaml.scm (ocaml-bisect): New variable.
* gnu/packages/patches/ocaml-bisect-fix-camlp4-in-another-directory.patch:
  New file.
* gnu/local.mk (dist_patch_DATA): Add patch.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 17:41:10 +01:00
Julien Lepiller 3d598ebd35
gnu: Add ocaml-stringext.
* gnu/packages/ocaml.scm (ocaml-stringext): New variable.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 17:41:10 +01:00
Julien Lepiller 0472836fce
gnu: Add ocaml-qtest.
* gnu/packages/ocaml.scm (ocaml-qtest): New variable.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 17:41:10 +01:00
Julien Lepiller ff891f10ed
gnu: Add ocaml-frontc.
* gnu/packages/ocaml.scm (ocaml-frontc): New variable.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 17:41:10 +01:00
Ludovic Courtès a614ce389f
gnu: Add Guile-Bash.
* gnu/packages/guile.scm (guile-bash): New variable.
2017-01-04 16:18:52 +01:00
Julien Lepiller ddf2b503b1
gnu: Add ocaml-zarith.
* gnu/packages/ocaml.scm (ocaml-zarith): New variable.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 16:05:28 +01:00
Julien Lepiller 93eeadf022
gnu: Add ocamlmod.
* gnu/packages/ocaml.scm (ocamlmod): New variable.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 16:05:25 +01:00
Julien Lepiller bc2c3bc627
gnu: Add camlzip.
* gnu/packages/ocaml.scm (camlzip): New variable.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 16:05:06 +01:00
Julien Lepiller 7a76b4afd0
gnu: Add ocaml-ounit.
* gnu/packages/ocaml.scm (ocaml-ounit): New variable.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 16:04:51 +01:00
Julien Lepiller ad3d730e3a
gnu: camlp4: Install camlp4 META file.
* gnu/packages/ocaml.scm (camlp4)[arguments]: Install in OCAMLPATH and
  META file.
  (ocaml-findlib)[arguments]: Delete camlp4 META file.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 16:04:32 +01:00
Julien Lepiller 56f73eadc0
gnu: ocaml: Use a helper function to download from ocaml-forge.
* gnu/packages/ocaml.scm (ocaml-forge-origin): New procedure.
  (lablgtk)[origin]: Use it.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 16:03:56 +01:00
Julien Lepiller e6876cb9dc
gnu: Add ocaml-build-system.
* guix/build/ocaml-build-system.scm: New file.
* guix/build-system/ocaml.scm: New file.
* Makefile.am (MODULES): Add them.
* gnu/packages/ocaml.scm (ocaml)[native-search-paths]: Adjuste OCAMLPATH.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 16:03:39 +01:00
Julien Lepiller e0ddaa8be3
gnu: camlp4: Compile native version.
* gnu/packages/ocaml.scm (camlp4)[arguments]: Disable parallel-build.
  Change default target to "all" to compile native and byte version.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 16:03:16 +01:00
David Craven 2b1f7b83f7
gnu: ocaml: Fix indentation.
* gnu/packages/ocaml.scm (ocaml): Fix indentation.
2017-01-04 16:03:07 +01:00
Julien Lepiller 796a17ab01
gnu: ocaml: Add CAML_LD_LIBRARY_PATH search-path.
* gnu/packages/ocaml.scm (ocaml)[native-search-paths]: Add
  CAML_LD_LIBRARY_PATH.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 16:03:00 +01:00
Julien Lepiller 8bd10c1082
gnu: ocaml: Add a .file directive to generated .s files.
* gnu/packages/ocaml.scm (ocaml)[origin]: Add patch.
* gnu/packages/patches/ocaml-Add-a-.file-directive.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.

Signed-off-by: David Craven <david@craven.ch>
2017-01-04 16:02:38 +01:00
David Craven 1ff755d1d5
gnu: Reorder imports in (gnu packages ocaml).
* gnu/packages/ocaml.scm: Reorder imports alphabetically.
2017-01-04 14:07:56 +01:00
David Craven d8e0a08c26
gnu: Use 'license:' prefix in (gnu packages ocaml).
* gnu/packages/ocaml.scm (ocaml, opam, camlp4, camlp5, hevea, coq,
  proof-general, ocaml-menhir, lablgtk, unison, ocaml-findlib)[license]:
  Add prefix.
2017-01-04 14:07:56 +01:00
David Craven 3254e1aba9
gnu: Add idris-lens.
* gnu/packages/idris.scm (idris-lens): New variable.
2017-01-04 12:11:14 +01:00
David Craven 5a16d828b3
gnu: Add idris-bifunctors.
* gnu/packages/idris.scm (idris-bifunctors): New variable.
2017-01-04 12:11:14 +01:00
David Craven 4e17fff386
gnu: Add idris-wl-pprint.
* gnu/packages/idris.scm (idris-wl-pprint): New variable.
2017-01-04 12:11:14 +01:00
David Craven ea3b38f1e1
gnu: Add idris-lightyear.
* gnu/packages/idris.scm (idris-lightyear, idris-default-arguments):
  New variables.
2017-01-04 12:11:14 +01:00
David Craven ae482ce12d
gnu: idris: Move to (gnu packages idris).
* gnu/packages/haskell.scm: Move 'idris' to...
* gnu/packages/idris.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add idris.scm.
2017-01-04 11:51:36 +01:00
David Craven c7a7129c5a
gnu: idris: Update to 0.99.
* gnu/packages/haskell.scm (idris): Update to 0.99.
2017-01-04 11:44:07 +01:00
David Craven c0d5b6452b
gnu: Order module imports in (gnu packages haskell) alphabetically.
* gnu/packages/haskell.scm: Order module imports alphabetically.
2017-01-04 11:44:07 +01:00
Ricardo Wurmus de793e9a5a
gnu: ghc-language-c: Fix up.
* gnu/packages/haskell.scm (ghc-language-c): Fix up indentation and
description.
2017-01-04 11:41:43 +01:00
David Craven 3b7ccbe94c
build-system: cargo: Use correct cargo.
* gnu/packages/rust.scm (cargo-bootstrap): Make private.
* guix/build-system/cargo.scm (default-cargo): Use cargo.
2017-01-04 11:29:15 +01:00
David Craven b5a09649db
gnu: Add cargo.
* gnu/packages/rust.scm (cargo): New variable.
2017-01-04 11:29:14 +01:00
Danny Milosavljevic 2d2388e243
gnu: Add ghc-language-c.
* gnu/packages/haskell.scm (ghc-language-c): New variable.
2017-01-04 11:27:24 +01:00
Leo Famulari 324f4fc559
gnu: mcrypt: Fix patches for CVE-2012-{4409,4527}.
This fixes CVE-2012-{4409,4527}.

This is a followup to commit fd1461879c.

* gnu/packages/patches/mcrypt-CVE-2012-4409.patch,
gnu/packages/patches/mcrypt-CVE-2012-4527.patch: Apply the patches to the mcrypt
source code.
2017-01-04 02:46:51 -05:00
Alex Griffin 37e8a2e219
gnu: calibre: Update to 2.76.0.
* gnu/packages/ebook.scm (calibre): Update to 2.76.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-04 00:00:34 -05:00
Alex Griffin f7e9f1cadc
gnu: feh: Update to 2.18.
* gnu/packages/image-viewers.scm (feh): Update to 2.18.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-03 23:39:22 -05:00
Alex Griffin eb5378f902
gnu: bs1770gain: Update to 0.4.12.
* gnu/packages/audio.scm (bs1770gain): Update to 0.4.12.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-03 23:39:22 -05:00
Alex Griffin 648733dc14
gnu: dwm: Update to 6.1.
* gnu/packages/suckless.scm (dwm): Update to 6.1.
[inputs]: Add libxft and freetype.
[arguments]: Set FREETYPEINC in #:make-flags.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-03 23:39:22 -05:00
Alex Griffin bc47382a5d
gnu: dmenu: Update to 4.6.
* gnu/packages/suckless.scm (dmenu): Update to 4.6.
[inputs]: Add libxft and freetype.
[arguments]: Set FREETYPEINC in #:make-flags.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-03 23:39:21 -05:00
Alex Griffin f3a53f3c8f
gnu: slock: Update to 1.4.
* gnu/packages/suckless.scm (slock): Update to 1.4.
[source] Remove CVE-2016-6866 patch (no longer needed).
* gnu/packages/patches/slock-CVE-2016-6866.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-03 23:39:21 -05:00
Alex Griffin 8efd807f95
gnu: trash-cli: Update to 0.17.1.1.
* gnu/packages/shellutils.scm (trash-cli): Update to 0.17.1.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-03 23:39:21 -05:00
Tobias Geerinckx-Rice 3b40213923
gnu: Add wimlib.
* gnu/packages/backup.scm (wimlib): New variable.
2017-01-04 05:14:22 +01:00
Tobias Geerinckx-Rice 835d371f4b
gnu: parallel: Update to 20161222.
* gnu/packages/parallel.scm (parallel): Update to 20161222.
2017-01-04 05:14:22 +01:00
Tobias Geerinckx-Rice 0b2a91d8b7
gnu: global: Update to 6.5.6.
* gnu/packages/code.scm (global): Update to 6.5.6.
2017-01-04 05:14:22 +01:00
Tobias Geerinckx-Rice 02dadd3827
gnu: nano: Update to 2.7.3.
* gnu/packages/nano.scm (nano): Update to 2.7.3.
2017-01-04 05:14:22 +01:00
Tobias Geerinckx-Rice 3b3b60d037
gnu: Use HTTPS for all sourceforge.net home pages.
* gnu/packages/admin.scm (mingetty, clusterssh)[home-page]: Use HTTPS.
* gnu/packages/audio.scm (libbs2b, soxr)[home-page]: Likewise.
* gnu/packages/bioinformatics.scm (bless)[home-page]: Likewise.
* gnu/packages/display-managers.scm (slim)[home-page]: Likewise.
* gnu/packages/games.scm (extremetuxracer)[home-page]: Likewise.
* gnu/packages/ghostscript.scm (gs-fonts)[home-page]: Likewise.
* gnu/packages/haskell.scm (ghc-regex-base, ghc-regex-posix,
ghc-regex-compat)[home-page]: Likewise.
* gnu/packages/image.scm (imlib2)[home-page]: Likewise.
* gnu/packages/libreoffice.scm (librevenge, libcmis, libodfgen, libmwaw)
[home-page]: Likewise.
* gnu/packages/linux.scm (hdparm, acpid, libavc1394, rng-tools)
[home-page]: Likewise.
* gnu/packages/mail.scm (esmtp)[home-page]: Likewise.
* gnu/packages/mp3.scm (ripperx)[home-page]: Likewise.
* gnu/packages/onc-rpc.scm (libtirpc)[home-page]: Likewise.
* gnu/packages/perl.scm (perl-czplib)[home-page]: Likewise.
* gnu/packages/python.scm (python-pyasn1-modules)[home-page]: Likewise.
* gnu/packages/xdisorg.scm (xosd)[home-page]: Likewise.
2017-01-04 05:14:22 +01:00
Christopher Baines 0916dc526e
gnu: Add emacs-git-gutter
* gnu/packages/emacs.scm (emacs-git-gutter): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-03 22:46:55 -05:00
Kei Kebreau ea5cc29561
gnu: supertux: Update to 0.5.1.
* gnu/packages/games.scm (supertux): Update to 0.5.1.
2017-01-03 18:07:45 -05:00
Marius Bakke 0c1b29db3a
gnu: m4: Update to 1.4.18.
* gnu/packages/m4.scm (m4): Update to 1.4.18.
[source]: Use xz compressed tarball.
2017-01-03 19:57:22 +01:00
Leo Famulari f339f2773d
gnu: assword: Update to 0.10.
* gnu/packages/password-utils.scm (assword): Update to 0.10.
[arguments]: Use Python 3 instead of Python 2.
[inputs]: Use Python 3 variants of inputs. Replace python2-pygpgme with
python-gpg. Remove python2-pygtk. Add python-pygobject.
[native-inputs]: Replace help2man with txt2man.
[arguments]: Remove PYTHONPATH from 'Makefile' in the 'manpage' phase.
2017-01-03 12:35:45 -05:00
Leo Famulari 7637de2313
gnu: Add python-xdo.
* gnu/packages/python.scm (python-xdo): New variable.
(python2-xdo): Use package-with-python2.
2017-01-03 12:35:44 -05:00
Leo Famulari e871c332a0
gnu: python2-xdo: Update to 0.3.
* gnu/packages/python.scm (python2-xdo): Update to 0.3.
2017-01-03 12:35:44 -05:00
Leo Famulari e3dd1f0cb8
gnu: Add python-gpg.
* gnu/packages/gnupg.scm (python-gpg, python2-gpg): New variable.
2017-01-03 12:35:44 -05:00
Leo Famulari 9e0f16f23f
gnu: gpgme: Update to 1.8.0.
* gnu/packages/gnupg.scm (gpgme): Update to 1.8.0.
[arguments]: Don't set 'GPG=gpg2' in #:configure-flags. GnuPG-2.x is
installed as 'gpg' on Guix.
2017-01-03 12:35:44 -05:00
Ludovic Courtès 4d0a3d8e9f
system: grub: Load relevant EFI modules on EFI systems.
* gnu/system/grub.scm (eye-candy)[setup-gfxterm-body]: Add 'insmod'
invocations when ${grub_platform} is "efi".
2017-01-03 18:16:01 +01:00
Ludovic Courtès 70c6341110
gnu: Add Zile-on-Guile.
* gnu/packages/zile.scm (zile-on-guile): New variable.
2017-01-03 18:16:01 +01:00
Marius Bakke e2c3037427
gnu: pcsc-lite: Update to 1.8.20 [fixes CVE-2016-10109].
* gnu/packages/security-token.scm (pcsc-lite): Update to 1.8.20.
2017-01-03 17:15:04 +01:00
Manolis Ragkousis 367f701379
gnu: glibc-hurd: Disable werror.
* gnu/packages/base.scm (glibc/hurd)[arguments]: Add "--disable-werror".
2017-01-03 16:00:43 +02:00
Manolis Ragkousis 62596a158b
gnu: Use hurd-triplet? to check if GNU/Hurd.
* gnu/packages/make-bootstrap.scm (hurd-triplet?): Move it from here..
* gnu/packages/hurd.scm: ..to here. New exported procedure.
* gnu/packages/commencement.scm (glibc-final-with-bootstrap-bash)
  [arguments]: Replace string-match.
  [inputs]: Same.
* gnu/packages/cross-base.scm (cross-libc)[native-inputs]: Same.
2017-01-03 16:00:39 +02:00
Kei Kebreau 6a37872cd2
gnu: chicken: Fix CVE-2016-{6830,6831}.
* gnu/packages/patches/chicken-CVE-2016-6830+CVE-2016-6831.patch: New file.
* gnu/local.mk (dist_patch_DATA): Use it.
* gnu/packages/scheme.scm (chicken)[source]: Use it.
2017-01-03 08:35:02 -05:00
Kei Kebreau b9b6db45e8
gnu: chicken: Update to 4.11.1.
* gnu/packages/scheme.scm (chicken): Update to 4.11.1.
2017-01-03 08:34:54 -05:00
Julien Lepiller d338237d8c
services: nginx: Make service extensible.
* gnu/services/web.scm (<nginx-configuration>)[server-blocks]: New
field.
(nginx-activation): When CONFIG-FILE is #f, use 'default-nginx-config'.
(nginx-shepherd-service): Likewise.
(nginx-service-type): Add 'compose' and 'extend' fields.
(nginx-service): Change default value of #:server-list to '(), and
default value of #:config-file to #f.
* doc/guix.texi (Web Services): Document it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-01-03 14:30:44 +01:00
Julien Lepiller 4e9ae301ce
services: nginx: Fix multiple index and server name.
* gnu/services/web.scm (config-domain-strings, config-index-string): separate
names with a space.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-03 14:30:44 +01:00
Julien Lepiller 3b9b12ef49
services: nginx: Rename "vhost" to "server".
* gnu/services/web.scm (<nginx-vhost-configuration>): Rename to...
(<nginx-server-configuration>): ... this.
* doc/guix.texi (Web Services): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-03 14:30:44 +01:00
Roel Janssen 7b030c9f9b
gnu: r-plotrix: Update to 3.6-4.
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-4.
2017-01-03 13:51:05 +01:00
Roel Janssen 0c74399d98
gnu: r-git2r: Update to 0.18.0.
* gnu/packages/statistics.scm (r-git2r): Update to 0.18.0.
2017-01-03 13:49:18 +01:00
Roel Janssen 807db78fc9
gnu: r-hmisc: Update to 4.0-2.
* gnu/packages/statistics.scm (r-hmisc): Update to 4.0-2.
  [propagated-inputs]: Add r-base64enc.
2017-01-03 13:46:14 +01:00
Roel Janssen 437d064dc5
gnu: r-openssl: Update to 0.9.6.
* gnu/packages/statistics.scm (r-openssl): Update to 0.9.6.
2017-01-03 13:39:51 +01:00
Roel Janssen 596fcfac88
gnu: r-jsonlite: Update to 1.2.
* gnu/packages/web.scm (r-jsonlite): Update to 1.2.
2017-01-03 13:37:55 +01:00
Roel Janssen da13738ef0
gnu: r-ggplot2: Update to 2.2.1.
* gnu/packages/statistics.scm (r-ggplot2): Update to 2.2.1.
2017-01-03 13:34:53 +01:00
Roel Janssen 407a280103
gnu: r-genomicranges: Update to 1.26.2.
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.26.2.
2017-01-03 13:28:35 +01:00
Roel Janssen ac370a3397
gnu: r-genomeinfodb: Update to 1.10.2.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.10.2.
2017-01-03 12:47:36 +01:00
Efraim Flashner 4fb14fad94
gnu: sudo: Update to 1.8.19p1.
* gnu/packages/admin.scm (sudo): Update to 1.8.19p1.
2017-01-03 10:12:27 +02:00
Brandon Ludwig b1251a2f96
gnu: arc-theme: Update to 20161119.
* gnu/packages/gnome.scm (arc-theme): Update to 20161119.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-03 00:29:42 -05:00
Maxim Cournoyer 6155186838
gnu: gimp: Enable PDF support
* gnu/packages/gimp.scm (gimp)[inputs]: Add poppler.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-03 00:18:51 -05:00
Leo Famulari 47932c0d44
gnu: lynx: Update to 2.8.9dev.11 [fixes CVE-2016-9179].
* gnu/packages/lynx.scm (lynx): Update to 2.8.9dev.11.
2017-01-02 23:52:12 -05:00
Leo Famulari b3e2ea8d48
gnu: Add sonic.
* gnu/packages/speech.scm (sonic): New variable.
2017-01-02 18:03:10 -05:00
Mathieu OTHACEHE 5819431c59
gnu: Add cmst.
* gnu/packages/connman.scm (cmst): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-02 22:55:33 +01:00
Mathieu OTHACEHE 125e3cdece
gnu: connman: Add dependency on polkit.
* gnu/packages/connman.scm (connman)[arguments]: Add "--enable-polkit".
[inputs]: Add POLKIT.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-01-02 22:55:33 +01:00
Efraim Flashner 832d60dc01
gnu: mpv: Update to 0.23.0.
* gnu/packages/video.scm (mpv): Update to 0.23.0.
2017-01-02 21:48:49 +02:00
Efraim Flashner 8d2de491e5
gnu: openvpn: Update to 2.3.14.
* gnu/packages/vpn.scm (openvpn): Update to 2.3.14.
2017-01-02 21:48:48 +02:00
Efraim Flashner 68b3627cd6
gnu: ffmpeg@2.8: Update to 2.8.10.
* gnu/packages/video.scm (ffmpeg@2.8): Update to 2.8.10.
2017-01-02 21:48:48 +02:00
Efraim Flashner 4b50daab00
gnu: jasper: Update to 2.0.10.
* gnu/packages/image.scm (jasper): Update to 2.0.10.
2017-01-02 21:48:38 +02:00
Ludovic Courtès 1a49a10a94
gnu: fftw: Factorize creation of the --enable-threads variant.
* gnu/packages/algebra.scm (pthread-variant): New procedure.
(fftw-with-threads, fftwf-with-threads): Use it.
2017-01-02 14:54:24 +01:00
Ludovic Courtès 7355634db3
gnu: Disambiguate packages with the same name.
* gnu/packages/algebra.scm (fftw-with-threads, fftwf-with-threads): Add
'name' field.
* gnu/packages/llvm.scm (llvm-for-extempore): Likewise.
2017-01-02 14:54:24 +01:00
Ludovic Courtès 9af076245f
gnu: gfortran: Remove non-'eq?' duplicate of gfortran@4.9.
* gnu/packages/gcc.scm (gfortran): Turn into an alias for GFORTRAN-4.9.
2017-01-02 14:54:24 +01:00
Tobias Geerinckx-Rice 1b5ea0922f
gnu: python-s3transfer: Update to 0.1.10.
* gnu/packages/python.scm (python-s3transfer): Update to 0.1.10.
2017-01-02 08:37:26 +01:00
Tobias Geerinckx-Rice 1f89fb1691
gnu: python-greenlet: Update to 0.4.11.
* gnu/packages/python.scm (python-greenlet): Update to 0.4.11.
2017-01-02 08:37:25 +01:00
Tobias Geerinckx-Rice 3753f2e6e9
gnu: python-mako: Update to 1.0.6.
* gnu/packages/python.scm (python-mako): Update to 1.0.6.
2017-01-02 08:37:25 +01:00
Tobias Geerinckx-Rice af27e845e1
gnu: awscli: Update to 1.11.35.
* gnu/packages/python.scm (awscli): Update to 1.11.35.
2017-01-02 08:37:24 +01:00
Tobias Geerinckx-Rice bbb99d6b37
gnu: python-werkzeug: Update to 0.11.15.
* gnu/packages/python.scm (python-werkzeug): Update to 0.11.15.
2017-01-02 08:37:23 +01:00
Tobias Geerinckx-Rice 27f9148e1d
gnu: python-backports-abc: Update to 0.5.
* gnu/packages/python.scm (python-backports-abc): Update to 0.5.
2017-01-02 08:37:23 +01:00
Tobias Geerinckx-Rice d79fa7da1b
gnu: python-decorator: Update to 4.0.10.
* gnu/packages/python.scm (python-decorator): Update to 4.0.10.
2017-01-02 08:37:22 +01:00
Tobias Geerinckx-Rice 819939cb94
gnu: python-pycparser: Use ‘modify-phases’ syntax.
* gnu/packages/python.scm (python-pycparser)[arguments]: Use
‘modify-phases’.
2017-01-02 08:37:21 +01:00
Tobias Geerinckx-Rice 5043b20dcd
gnu: python-pycparser: Update to 2.17.
* gnu/packages/python.scm (python-pycparser): Update to 2.17.
2017-01-02 08:28:28 +01:00
Leo Famulari 0d48ff811f
gnu: beets: Build with Python 3.
* gnu/packages/music.scm (beets)[arguments]: Build with python@3.
(native-inputs): Use Python-2 variants of all inputs.
(inputs): Use Python-2 variants of all inputs. Remove python-pyechonest.
2017-01-01 21:06:32 -05:00
Leo Famulari 27ccefc3d2
gnu: beets: Update to 1.4.2.
* gnu/packages/music.scm (beets): Update to 1.4.2.
2017-01-01 21:06:24 -05:00
Alex Vong 20be64dcf7
gnu: tar: Fix CVE-2016-6321.
* gnu/packages/patches/tar-CVE-2016-6321.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (tar)[source]: Use it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-01 20:19:36 -05:00
Leo Famulari 2e161eafd8
gnu: python-pyicu: Update to 1.9.5.
* gnu/packages/python.scm (python-pyicu, python2-pyicu): Update to 1.9.5.
[source]: Use pypi-uri.
2017-01-01 20:15:06 -05:00
Theodoros Foradis 9a93f57473
gnu: yosys: Update to 0.7.
* gnu/packages/fpga.scm (yosys): Update to 0.7.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-01 20:06:43 -05:00
Theodoros Foradis f90f6b683e
gnu: yosys: Add xdot functionality.
* gnu/packages/fpga.scm (yosys)[inputs]: Add xdot, graphviz and psmisc.
[arguments]: Add 'fix-paths' phase.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-01 20:06:43 -05:00
Theodoros Foradis abdd28e8c1
gnu: Add xdot.
* gnu/packages/graphviz.scm (xdot): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-01 20:06:43 -05:00
Ludovic Courtès 231eddc88a
services: cuirass: Remove 'cuirass-service' procedure.
* gnu/services/cuirass.scm (<cuirass-configuration>)[specifications]:
Remove default value.
(cuirass-service): Remove.
* doc/guix.texi (Continuous Integration): Adjust accordingly.
2017-01-01 23:30:31 +01:00
Ludovic Courtès 8de938d59a
services: cuirass: Allow for gexps in specifications.
* gnu/services/cuirass.scm (<cuirass-configuration>)[specifications]:
Change default value to #~'().
(cuirass-shepherd-service): Remove conditional for "--specifications".
Use 'scheme-file' instead of 'plain-file'.  Change file name to
"cuirass-specs.scm".
* doc/guix.texi (Continuous Integration): Change the example to use a
gexp where #:file refers to a file within Cuirass.  Adjust
documentation.
2017-01-01 23:30:30 +01:00
Leo Famulari 7be13d0006
gnu: python-ndg-httpsclient: Use pypi-uri.
* gnu/packages/python.scm (python-ndg-httpsclient, python2-ndg-httpsclient)
[source]: Use pypi-uri.
2017-01-01 17:01:32 -05:00
Ricardo Wurmus 5dbeccf5b4
gnu: diffoscope: Embed tool references.
Fixes <http://bugs.gnu.org/25315>.

* gnu/packages/package-management.scm (diffoscope)[inputs]: Add
colordiff and vim.
[arguments]: Add "embed-tool-references" build phase to embed references
to "colordiff", "xxd", and "readelf".
2017-01-01 21:53:50 +01:00
Alex Vong ed88dd4512
gnu: mariadb: Update to 10.1.20.
* gnu/packages/databases.scm (mariadb): Update to 10.1.20.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-01 14:51:04 -05:00
Alex Vong e63b19f509
gnu: mysql: Update to 5.7.17.
* gnu/packages/databases.scm (mysql): Update to 5.7.17.

Signed-off-by: Leo Famulari <leo@famulari.name>
2017-01-01 14:45:23 -05:00
Ricardo Wurmus 395bbfdbea
gnu: Add propeller-development-suite.
* gnu/packages/embedded.scm (propeller-development-suite): New variable.
2017-01-01 13:56:28 +01:00
Ricardo Wurmus 3ebc86d9bd
gnu: Add spinsim.
* gnu/packages/embedded.scm (spinsim): New variable.
2017-01-01 13:56:28 +01:00
Ricardo Wurmus 0a7860c438
gnu: Add spin2cpp.
* gnu/packages/embedded.scm (spin2cpp): New variable.
2017-01-01 13:56:28 +01:00
Ricardo Wurmus c6b96af794
gnu: Add propeller-load.
* gnu/packages/embedded.scm (propeller-load): New variable.
2017-01-01 13:56:28 +01:00
Ricardo Wurmus 150e0a1ec6
gnu: Add openspin.
* gnu/packages/embedded.scm (openspin): New variable.
2017-01-01 13:56:27 +01:00
Ricardo Wurmus eb88fbafcd
gnu: Add propeller-toolchain.
* gnu/packages/embedded.scm (propeller-toolchain): New variable.
2017-01-01 13:56:27 +01:00
Ricardo Wurmus 0d0079b2c5
gnu: Add proplib.
* gnu/packages/embedded.scm (proplib): New variable.
2017-01-01 13:56:27 +01:00
Ricardo Wurmus 68cb27840e
gnu: Add propeller-gcc.
* gnu/packages/embedded.scm (propeller-gcc): New variable.
2017-01-01 13:56:27 +01:00
Ricardo Wurmus 2d7c92134e
gnu: Add propeller-binutils.
* gnu/packages/embedded.scm (propeller-binutils): New variable.
2017-01-01 13:56:27 +01:00
Ricardo Wurmus 6f5b1c9107
gnu: Add dummy linker for propeller-elf.
* gnu/packages/bootstrap.scm (glibc-dynamic-linker): Add case for
propeller-elf.
2017-01-01 13:56:27 +01:00
Ricardo Wurmus c26ba570cc
gnu: clisp: Remove timestamps.
* gnu/packages/lisp.scm (clisp)[arguments]: Add "remove-timestamps"
phase to remove "__DATE__" and "__TIME__".
2017-01-01 13:55:50 +01:00
Ricardo Wurmus 636c77d066
gnu: clisp: Use modify-phases syntax.
* gnu/packages/lisp.scm (clisp)[arguments]: Use modify-phases syntax.
2017-01-01 13:55:50 +01:00
Alex Kost c50dc711a1
gnu: manaplus: Update to 1.6.12.24.
* gnu/packages/games.scm (manaplus): Update to 1.6.12.24.
2017-01-01 11:47:08 +03:00
Ben Woodcroft 25d84d3122
gnu: python-dendropy: Update to 4.2.0.
* gnu/packages/bioinformatics.scm (python-dendropy): Update to 4.2.0.
[source]: Remove patch.
(python2-dendropy)[source]: Use the same source as python-dendropy.
* gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: Remove
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2017-01-01 16:47:47 +10:00
Ben Woodcroft 322a583fcf
gnu: diamond: Update to 0.8.31.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.31.
2017-01-01 16:47:47 +10:00
Ludovic Courtès 7fc2d377d1
gnu: nagios: Update to 4.2.4 [fixes CVE-2016-{9565,9566}].
* gnu/packages/monitoring.scm (nagios): Update to 4.2.4.
[native-inputs]: New field.
2016-12-31 20:02:59 +01:00
Tobias Geerinckx-Rice b13a5b4d16
gnu: python-graphql-relay: Update to 0.4.5.
* gnu/packages/python.scm (python-graphql-relay): Update to 0.4.5.
2016-12-31 16:51:56 +01:00
Tobias Geerinckx-Rice 0c315fb394
gnu: python-freezegun: Update to 0.3.8.
* gnu/packages/python.scm (python-freezegun): Update to 0.3.8.
2016-12-31 16:51:56 +01:00
Tobias Geerinckx-Rice 234ade2d7b
gnu: python-ply: Update to 3.9.
* gnu/packages/python.scm (python-ply): Update to 3.9.
[source]: Use pypi-uri.
2016-12-31 16:51:55 +01:00
Tobias Geerinckx-Rice ab0c342924
gnu: python-pyquery: Update to 1.2.17.
* gnu/packages/python.scm (python-pyquery): Update to 1.2.17.
2016-12-31 16:51:55 +01:00
Tobias Geerinckx-Rice 42734b9a88
gnu: python-click-log: Update to 0.1.8.
* gnu/packages/python.scm (python-click-log): Update to 0.1.8.
2016-12-31 16:51:54 +01:00
Tobias Geerinckx-Rice ae476d01da
gnu: python-ndg-httpsclient: Update to 0.4.2.
* gnu/packages/python.scm (python-ndg-httpsclient): Update to 0.4.2.
2016-12-31 16:51:54 +01:00
Tobias Geerinckx-Rice f165648e1b
gnu: python-ipykernel: Update to 4.5.2.
* gnu/packages/python.scm (python-ipykernel): Update to 4.5.2.
2016-12-31 16:51:53 +01:00
Tobias Geerinckx-Rice 45cc957c72
gnu: python-jupyter-core: Update to 4.2.1.
* gnu/packages/python.scm (python-jupyter-core): Update to 4.2.1.
2016-12-31 16:51:53 +01:00
Tobias Geerinckx-Rice 594358f5b6
gnu: python2-fastlmm: Update to 0.2.26.
* gnu/packages/python.scm (python2-fastlmm): Update to 0.2.26.
2016-12-31 16:51:40 +01:00
Tobias Geerinckx-Rice a5f92ca04f
gnu: python-pytz: Update to 2016.10.
* gnu/packages/python.scm (python-pytz): Update to 2016.10.
2016-12-31 16:36:20 +01:00
Tobias Geerinckx-Rice bf5e4bc42a
gnu: python-pyyaml: Update to 3.12.
* gnu/packages/python.scm (python-pyyaml): Update to 3.12.
[source]: Use pypi-uri.
2016-12-31 15:27:24 +01:00
Tobias Geerinckx-Rice 7d2e758df5
gnu: python-pygments: Update to 2.1.3.
* gnu/packages/python.scm (python-pygments): Update to 2.1.3.
2016-12-31 15:27:23 +01:00
Kei Kebreau c055a37c8c
gnu: tiled: Update to 0.18.0.
* gnu/packages/game-development.scm (tiled): Update to 0.18.0.
2016-12-30 21:45:51 -05:00
ng0 da62a4a19e
gnu: mc: Partially fix absolute file paths.
Partially fixes <http://bugs.gnu.org/25273>.

* gnu/packages/mc.scm (mc)[arguments]: Add new phase 'fix-absolutism.
This substitutes absolute file paths with functional file paths.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-31 01:44:04 +01:00
Troy Sankey 0f391063d9
gnu: pius: Update to 2.2.2-0.891687c.
* gnu/packages/gnupg.scm (pius): Update to 2.2.2-0.891687c.
[inputs]: Change GNUPG-2.0 to GNUPG (2.1).

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-31 01:44:04 +01:00
José Miguel Sánchez García 68415aa4e1
gnu: libtermkey: Update to 0.19.
* gnu/packages/terminals.scm (libtermkey): Update to 0.19.

Co-authored-by: Leo Famulari <leo@famulari.name>
2016-12-30 16:15:25 -05:00
Leo Famulari 858b9afeaf
gnu: libpng: Mention CVE-2016-10087.
* gnu/packages/patches/libpng-fix-null-ptr-dereference.patch: Rename to ...
* gnu/packages/patches/libpng-CVE-2016-10087.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust.
* gnu/packages/image.scm (libpng/fixed)[source]: Use renamed patch.
2016-12-30 14:33:21 -05:00
Mark H Weaver 4037e5f52b
gnu: linux-libre@4.1: Update to 4.1.37.
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.37.
2016-12-30 04:26:11 -05:00
Ben Woodcroft a29929b32c
gnu: multiqc: Update to 0.9.
Suggested by Raoul Bonnal <ilpuccio.febo@gmail.com>.

* gnu/packages/bioinformatics.scm (multiqc): Update to 0.9.
[origin]: Add patch.
* gnu/packages/patches/multiqc-fix-git-subprocess-error.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-12-30 17:22:43 +10:00
Andreas Enge 89ccb1d881
gnu: gmp: Update to 6.1.2.
* gnu/packages/multiprecision.scm (gmp): Update to 6.1.2.
2016-12-30 00:38:24 +01:00
Chris Marusich 95d7d0c57f
gnu: elogind: Enable ACL support.
* gnu/packages/freedesktop.scm (elogind) [inputs]: Add acl.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-29 23:42:23 +01:00
Ludovic Courtès 3547a5effe
services: Add libmtp's udev rules to '%desktop-services'.
Suggested by Chris Marusich <cmmarusich@gmail.com>.

* gnu/services/desktop.scm (%desktop-services): Add 'mtp' service via
call to 'simple-service'.
2016-12-29 23:35:42 +01:00
Leo Famulari 87b5209558
gnu: mpd: Install systemd service files.
* gnu/packages/mpd.scm (mpd)[arguments]: Add 'install-service-files' phase.
2016-12-29 17:28:34 -05:00
Ricardo Wurmus 76b64381cb
gnu: r-genomicfeatures: Update to 1.26.2.
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.26.2.
2016-12-29 22:24:12 +01:00
Ricardo Wurmus 2f642e5229
gnu: r-biostrings: Update to 2.42.1.
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.42.1.
2016-12-29 22:24:11 +01:00
Ricardo Wurmus 72c2693b9e
gnu: r-limma: Update to 3.30.7.
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.30.7.
2016-12-29 22:24:11 +01:00
Ricardo Wurmus 5796af9981
gnu: r-variantannotation: Update to 1.20.2.
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.20.2.
2016-12-29 22:24:11 +01:00
Ricardo Wurmus 5d3acc0b36
gnu: r-edger: Update to 3.16.5.
* gnu/packages/bioinformatics.scm (r-edger): Update to 3.16.5.
2016-12-29 22:24:11 +01:00
Ricardo Wurmus 81a17b61e7
gnu: r-genomeinfodb: Update to 1.10.1.
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.10.1.
2016-12-29 22:24:11 +01:00
Ricardo Wurmus 54d9b568fc
gnu: r-iranges: Update to 2.8.1.
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.8.1.
2016-12-29 22:24:11 +01:00
Ricardo Wurmus 86fc9c4a2c
gnu: r-s4vectors: Update to 0.12.1.
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.12.1.
2016-12-29 22:24:11 +01:00
Ricardo Wurmus c8ad8b6976
gnu: r-biocstyle: Update to 2.2.1.
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.2.1.
2016-12-29 22:24:10 +01:00
Ricardo Wurmus 007ee80277
gnu: r-deseq2: Update to 1.14.1.
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.14.1.
2016-12-29 22:24:10 +01:00
Ricardo Wurmus d0f0579e6f
gnu: r-annotate: Update to 1.52.1.
* gnu/packages/bioinformatics.scm (r-annotate): Update to 1.52.1.
[propagated-inputs]: Add r-rcurl.
2016-12-29 22:24:10 +01:00
Leo Famulari a57495e27a
gnu: khard: Update to 0.11.3.
* gnu/packages/mail.scm (khard): Update to 0.11.3.
[arguments]: Build with python instead of python-2. Remove
'disable-egg-compression' phase.
[propagated-inputs]: Don't use python-2 variants of propagated-inputs.
2016-12-29 16:12:13 -05:00
Ricardo Wurmus 35bb2ff88a
gnu: r-rsqlite: Update to 1.1-1.
* gnu/packages/statistics.scm (r-rsqlite): Update to 1.1-1.
[propagated-inputs]: Add r-bh, r-memoise, r-plogr, and r-rcpp.
2016-12-29 21:49:13 +01:00
Ricardo Wurmus 28c041afe8
gnu: Add r-plogr.
* gnu/packages/statistics.scm (r-plogr): New variable.
2016-12-29 21:49:13 +01:00
Ricardo Wurmus ab607061cd
gnu: r-hmisc: Update to 4.0-1.
* gnu/packages/statistics.scm (r-hmisc): Update to 4.0-1.
[propagated-inputs]: Remove r-cluster, r-foreign, r-lattice, r-nnet, and
r-rpart; add r-base64.
2016-12-29 21:49:12 +01:00
Ricardo Wurmus 0811f0f9d2
gnu: Add r-base64.
* gnu/packages/statistics.scm (r-base64): New variable.
2016-12-29 21:49:12 +01:00
Ricardo Wurmus ca380feb37
gnu: r-rmarkdown: Update to 1.3.
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.3.
[propagated-inputs]: Remove r-tibble; add r-rprojroot.
2016-12-29 21:49:12 +01:00
Ricardo Wurmus 046e27e3f5
gnu: Add r-rprojroot.
* gnu/packages/statistics.scm (r-rprojroot): New variable.
2016-12-29 21:49:12 +01:00
Ricardo Wurmus a8e45b3240
gnu: r-rcpparmadillo: Update to 0.7.600.1.0.
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.600.1.0.
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): Update to
7.600.1.
2016-12-29 21:49:12 +01:00
Ricardo Wurmus b1c1f4d012
gnu: armadillo: Update to 7.600.2.
* gnu/packages/maths.scm (armadillo): Update to 7.600.2.
2016-12-29 21:49:12 +01:00
Ricardo Wurmus c729d3dc0e
gnu: r-zoo: Update to 1.7-14.
* gnu/packages/statistics.scm (r-zoo): Update to 1.7-14.
[propagated-inputs]: Remove r-lattice.
2016-12-29 21:49:11 +01:00
Ricardo Wurmus 53941eb7a5
gnu: r-fastcluster: Update to 1.1.22.
* gnu/packages/statistics.scm (r-fastcluster): Update to 1.1.22.
2016-12-29 21:49:11 +01:00
Ricardo Wurmus 3a181dc46e
gnu: r-plotly: Update to 4.5.6.
* gnu/packages/statistics.scm (r-plotly): Update to 4.5.6.
2016-12-29 21:49:11 +01:00
Ricardo Wurmus 54aa6eb6ee
gnu: r-r-rsp: Update to 0.40.0.
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.40.0.
2016-12-29 21:49:11 +01:00
Ricardo Wurmus 1a44753b95
gnu: r-r-utils: Update to 2.5.0.
* gnu/packages/statistics.scm (r-r-utils): Update to 2.5.0.
2016-12-29 21:49:11 +01:00
Ricardo Wurmus 62350c0797
gnu: r-coda: Update to 0.19-1.
* gnu/packages/statistics.scm (r-coda): Update to 0.19-1.
[propagated-inputs]: Remove r-lattice.
2016-12-29 21:49:11 +01:00
Ricardo Wurmus 3607afbe4c
gnu: r-chron: Update to 2.3-48.
* gnu/packages/statistics.scm (r-chron): Update to 2.3-48.
2016-12-29 21:49:11 +01:00
Ricardo Wurmus eaec5506ad
gnu: r-knitr: Update to 1.15.1.
* gnu/packages/statistics.scm (r-knitr): Update to 1.15.1.
[propagated-inputs]: Remove r-formatr.
2016-12-29 21:49:10 +01:00
Ricardo Wurmus fd7810d323
gnu: r-bh: Update to 1.62.0-1.
* gnu/packages/statistics.scm (r-bh): Update to 1.62.0-1.
2016-12-29 21:49:10 +01:00
Ricardo Wurmus dd4ae2950a
gnu: r-svglite: Update to 1.2.0.
* gnu/packages/statistics.scm (r-svglite): Update to 1.2.0.
2016-12-29 21:49:10 +01:00
Ricardo Wurmus 48a87bbe3b
gnu: r-gdtools: Update to 0.1.3.
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.3.
2016-12-29 21:49:10 +01:00
Ricardo Wurmus ab01f1cdb1
gnu: r-ggplot2: Update to 2.2.0.
* gnu/packages/statistics.scm (r-ggplot2): Update to 2.2.0.
[propagated-inputs]: Remove r-proto and r-svglite; add r-lazyeval and
r-tibble.
2016-12-29 21:49:10 +01:00
Ricardo Wurmus b94b03b7fa
gnu: r-scales: Update to 0.4.1.
* gnu/packages/statistics.scm (r-scales): Update to 0.4.1.
2016-12-29 21:49:10 +01:00
Ricardo Wurmus 8a8fc31c6a
gnu: r-mgcv: Update to 1.8-16.
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-16.
2016-12-29 21:49:10 +01:00
Ricardo Wurmus 421f7772b4
gnu: r-qtl: Update to 1.40-8.
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.40-8.
2016-12-29 21:49:09 +01:00
Ricardo Wurmus 2a1c1b8074
gnu: r-hms: Update to 0.3.
* gnu/packages/statistics.scm (r-hms): Update to 0.3.
2016-12-29 21:49:09 +01:00
Ricardo Wurmus 85455a08f4
gnu: r-git2r: Update to 0.17.0.
* gnu/packages/statistics.scm (r-git2r): Update to 0.17.0.
2016-12-29 21:49:09 +01:00
Ricardo Wurmus abb6f0540e
gnu: r-ade4: Update to 1.7-5
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-5.
2016-12-29 21:49:09 +01:00
Ricardo Wurmus db1b38af4e
gnu: r-xml: Update to 3.98-1.5.
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.5.
[propagated-inputs]: Remove r-rcurl.
2016-12-29 21:49:09 +01:00
Ricardo Wurmus 773a50114c
gnu: r-sparsem: Update to 1.74.
* gnu/packages/statistics.scm (r-sparsem): Update to 1.74.
2016-12-29 21:49:09 +01:00
Ricardo Wurmus 76ce7c3767
gnu: r-data-table: Update to 1.10.0.
* gnu/packages/statistics.scm (r-data-table): Update to 1.10.0.
[propagated-inputs]: Remove r-chron.
2016-12-29 21:49:09 +01:00
Ricardo Wurmus 58b93ad5d9
gnu: r-estimability: Update to 1.2.
* gnu/packages/statistics.scm (r-estimability): Update to 1.2.
2016-12-29 21:49:08 +01:00
Ricardo Wurmus eebac90aa8
gnu: r-rcpp: Update to 0.12.8.
* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.8.
2016-12-29 21:49:08 +01:00
Ricardo Wurmus 9cdf10f1c9
gnu: r-yaml: Update to 2.1.14.
* gnu/packages/statistics.scm (r-yaml): Update to 2.1.14.
2016-12-29 21:49:08 +01:00
Ricardo Wurmus c616810720
gnu: r-htmlwidgets: Update to 0.8.
* gnu/packages/web.scm (r-htmlwidgets): Update to 0.8.
2016-12-29 21:49:08 +01:00
Ricardo Wurmus f4ca28d911
gnu: r-curl: Update to 2.3.
* gnu/packages/web.scm (r-curl): Update to 2.3.
2016-12-29 21:49:08 +01:00
Ricardo Wurmus d3122150ca
gnu: r-servr: Update to 0.5.
* gnu/packages/web.scm (r-servr): Update to 0.5.
2016-12-29 21:49:08 +01:00
Alex Kost deb6276dda
Remove Emacs interface.
* emacs/guix-about.el: Remove file.
* emacs/guix-backend.el: Likewise.
* emacs/guix-base.el: Likewise.
* emacs/guix-buffer.el: Likewise.
* emacs/guix-build-log.el: Likewise.
* emacs/guix-command.el: Likewise.
* emacs/guix-config.el.in: Likewise.
* emacs/guix-devel.el: Likewise.
* emacs/guix-entry.el: Likewise.
* emacs/guix-external.el: Likewise.
* emacs/guix-geiser.el: Likewise.
* emacs/guix-guile.el: Likewise.
* emacs/guix-help-vars.el: Likewise.
* emacs/guix-helper.scm.in: Likewise.
* emacs/guix-history.el: Likewise.
* emacs/guix-hydra-build.el: Likewise.
* emacs/guix-hydra-jobset.el: Likewise.
* emacs/guix-hydra.el: Likewise.
* emacs/guix-info.el: Likewise.
* emacs/guix-init.el: Likewise.
* emacs/guix-license.el: Likewise.
* emacs/guix-list.el: Likewise.
* emacs/guix-location.el: Likewise.
* emacs/guix-main.scm: Likewise.
* emacs/guix-messages.el: Likewise.
* emacs/guix-pcomplete.el: Likewise.
* emacs/guix-popup.el: Likewise.
* emacs/guix-prettify.el: Likewise.
* emacs/guix-profiles.el: Likewise.
* emacs/guix-read.el: Likewise.
* emacs/guix-ui-generation.el: Likewise.
* emacs/guix-ui-license.el: Likewise.
* emacs/guix-ui-location.el: Likewise.
* emacs/guix-ui-package.el: Likewise.
* emacs/guix-ui-system-generation.el: Likewise.
* emacs/guix-ui.el: Likewise.
* emacs/guix-utils.el: Likewise.
* emacs/local.mk: Likewise.
* doc/emacs.texi: Likewise.
* doc/guix.texi: Remove cross-references to Emacs nodes.
(Package Management): Mention 'emacs-guix' package.
* doc/contributing.texi (The Perfect Setup): Remove the reference.
* doc/htmlxref.cnf: Add 'emacs-guix' URL.
* Makefile.am: Remove Emacs stuff.
* configure.ac: Likewise.
* gnu/packages/package-management.scm (guix-0.12.0)[native-inputs]:
Remove "emacs".
[propagated-inputs]: Remove "geiser" and "emacs-magit-popup".

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-12-29 23:40:24 +03:00
Ricardo Wurmus 94a6f20baf
gnu: r-colorspace: Update to 1.3-2.
* gnu/packages/statistics.scm (r-colorspace): Update to 1.3-2.
2016-12-29 20:10:07 +01:00
Raoul Jean Pierre Bonnal 2fd261a37a
gnu: Add r-statmod.
* gnu/packages/statistics.scm (r-statmod): New variable.
2016-12-29 19:54:59 +01:00
Raoul Jean Pierre Bonnal 294304169a
gnu: Add r-ggbeeswarm.
* gnu/packages/statistics.scm (r-ggbeeswarm): New variable.
2016-12-29 19:54:59 +01:00
Raoul Jean Pierre Bonnal 649d0c4841
gnu: Add r-sourcetools.
* gnu/packages/statistics.scm (r-sourcetools): New variable.
2016-12-29 19:54:59 +01:00
Raoul Jean Pierre Bonnal 6ba279853c
gnu: Add r-beeswarm.
* gnu/packages/statistics.scm (r-beeswarm): New variable.
2016-12-29 19:54:59 +01:00
Raoul Jean Pierre Bonnal 069581351b
gnu: Add r-vipor.
* gnu/packages/statistics.scm (r-vipor): New variable.
2016-12-29 19:54:58 +01:00
Leo Famulari fc604eda3d
gnu: libpng-1.2: Update to 1.2.57 [security update].
* gnu/packages/image.scm (libpng-1.2): Update to 1.2.57.
[replacement]: New field.
2016-12-29 13:41:43 -05:00
Leo Famulari 322e724bfa
gnu: libpng: Fix a null pointer dereference [fixes security issue].
* gnu/packages/patches/libpng-fix-null-ptr-dereference.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libpng)[replacement]: New field.
(libpng/fixed): New variable.
2016-12-29 13:36:00 -05:00
Leo Famulari d835c6cc4b
gnu: mpd: Update to 0.19.21.
* gnu/packages/mpd.scm (mpd): Update to 0.19.21.
2016-12-29 11:30:31 -05:00
ng0 b954256337
gnu: rustc: Update to 1.14.0.
* gnu/packages/rust.scm (rustc): Update to 1.14.0.
  %rust-bootstrap-binaries: Update to 1.13.0.

Signed-off-by: David Craven <david@craven.ch>
2016-12-29 12:38:23 +01:00
Ricardo Wurmus e62e975b1f
gnu: mu: Avoid bootstrapping.
* gnu/packages/mail.scm (mu)[arguments]: Rename "patch-configure.ac" to
"patch-configure" and only patch "configure" script; remove "autoreconf"
phase.
[native-inputs]: Remove "autoconf", "automake", "libtool", and
"texinfo".
2016-12-29 09:20:08 +01:00
Ricardo Wurmus e7b9da2411
gnu: mu: Update to 0.9.18.
* gnu/packages/mail.scm (mu): Update to 0.9.18.
2016-12-29 08:58:57 +01:00
Tobias Geerinckx-Rice 43c0b9beaf
gnu: perl-zip: Update to 1.59.
* gnu/packages/zip.scm (perl-zip): Update to 1.59.
2016-12-29 05:37:01 +01:00
ng0 d5bbf806f3
gnu: Add python-trollius-redis.
* gnu/packages/python.scm (python-trollius-redis, python2-trollius-redis): New
variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-28 22:41:53 -05:00
ng0 789de5e279
gnu: Add python-straight-plugin.
* gnu/packages/python.scm (python-straight-plugin, python2-straight-plugins):
New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-28 22:41:53 -05:00
ng0 a0e41de4ab
gnu: Add python-openid-teams.
* gnu/packages/python.scm (python-openid-teams, python2-openid-teams): New
variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-28 22:41:53 -05:00
ng0 03702173f1
gnu: Add python-openid-cla.
* gnu/packages/python.scm (python-openid-cla, python2-openid-cla): New
variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-28 22:41:52 -05:00
ng0 3ef00f5609
gnu: Add python2-openid.
* gnu/packages/python.scm (python2-openid): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-28 22:41:52 -05:00
ng0 0151a8df22
gnu: Add python-pygit2.
* gnu/packages/python.scm (python-pygit2, python2-pygit2): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-28 22:41:52 -05:00
ng0 460fccd4b3
gnu: Add python-munch.
* gnu/packages/python.scm (python-munch, python2-munch): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-28 22:41:51 -05:00
ng0 9f21414de4
gnu: Add python-kitchen.
* gnu/packages/python.scm (python-kitchen, python2-kitchen): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-28 22:41:51 -05:00
ng0 a2c7d88e74
gnu: Add python-flask-multistatic.
* gnu/packages/python.scm (python-flask-multistatic, python2-flask-multistatic):
New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-28 22:41:51 -05:00
ng0 a7ad802be5
gnu: Add python-flask-wtf.
* gnu/packages/python.scm (python-flask-wtf, python2-flask-wtf): New variables.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-28 22:41:45 -05:00
Tobias Geerinckx-Rice 50f7da2fc8
gnu: xonsh: Update to 0.5.1.
* gnu/packages/shells.scm (xonsh): Update to 0.5.1.
2016-12-29 02:38:21 +01:00
Tobias Geerinckx-Rice 6a34f4ccc8
gnu: python-prompt-toolkit: Update to 1.0.9.
* gnu/packages/python.scm (python-prompt-toolkit): Update to 1.0.9.
2016-12-29 02:38:21 +01:00
Tobias Geerinckx-Rice 791ac6a68d
gnu: python-markdown: Update to 2.6.7.
* gnu/packages/python.scm (python-markdown): Update to 2.6.7.
2016-12-29 02:38:20 +01:00
Tobias Geerinckx-Rice 2ee57340f4
gnu: python-numexpr: Update to 2.6.1.
* gnu/packages/python.scm (python-numexpr): Update to 2.6.1.
2016-12-29 02:38:20 +01:00
Tobias Geerinckx-Rice ffb1e98d74
gnu: python-babel: Update to 2.3.4.
* gnu/packages/python.scm (python-babel): Update to 2.3.4.
2016-12-29 02:38:20 +01:00
Leo Famulari 3221d1a392
gnu: icu4c: Update to 58.2.
* gnu/packages/icu4c.scm (icu4c): Update to 58.2.
2016-12-28 19:35:22 -05:00
Manolis Ragkousis 1d9c889881
gnu: glibc-hurd: Update to 2.23.
* gnu/packages/base.scm (glibc/hurd)[version]: Update to version 2.23.
2016-12-28 21:14:20 +02:00
Marius Bakke 517c3207d3
gnu: rofi: Update to 1.3.0.
* gnu/packages/xdisorg.scm (rofi): Update to 1.3.0.
2016-12-28 18:00:02 +01:00
Tobias Geerinckx-Rice 48dc9f3af3
gnu: znc: Update to 1.6.4.
* gnu/packages/messaging.scm (znc): Update to 1.6.4.
2016-12-28 05:14:05 +01:00
Tobias Geerinckx-Rice c09dd486a2
gnu: util-linux: Update to 2.28.2.
* gnu/packages/linux.scm (util-linux): Update to 2.28.2.
2016-12-27 22:24:44 +01:00
Nicolas Goaziou 4dbaa12f5d
gnu: wireshark: Update to 2.2.3.
* gnu/packages/networking.scm (wireshark): Update to 2.2.3.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-27 17:05:07 +01:00
Nicolas Goaziou d531b9fdfe
gnu: emacs-org: Update to 20161224.
* gnu/packages/emacs.scm (emacs-org): Update to 20161224.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-27 17:03:45 +01:00
Stefan Reichoer 9e6c7c425e
gnu: Add httpstat.
* gnu/packages/networking.scm (httpstat): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-27 16:56:34 +01:00
Thomas Danckaert ea8450c82a
gnu: Add python-netcdf4.
* gnu/packages/python.scm (python-netcdf4, python2-netcdf4): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-27 16:30:59 +01:00
Ricardo Wurmus 2c8d6c0be4
gnu: r-rcas: Update to 1.1.1.
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.1.1.
[propagated-inputs]: Add plotrix.
2016-12-27 14:50:55 +01:00
Leo Famulari 1194575b3c
gnu: python-pycrypto: Add TODO "removal" comment.
* gnu/packages/python.scm (python-pycrypto, python2-pycrypto): Add
comment.
2016-12-26 19:51:54 -05:00
Leo Famulari 4de2a710a6
gnu: python-stem: Don't use python-pycrypto.
Python-pycrypto is an optional dependency of python-stem. Python-pycrypto is
unmaintained [0] and contains an exploitable buffer overflow bug [1].

[0] https://github.com/dlitz/pycrypto/issues/173
[1] https://github.com/dlitz/pycrypto/issues/176

* gnu/packages/python.scm (python-stem, python2-stem)[propagated-inputs]: Remove
python-pycrypto.
2016-12-26 19:51:49 -05:00
ng0 91426243f1
gnu: awesome: Update to 4.0.
* gnu/packages/wm.scm (awesome): Update to 4.0.
[source]: Adjust URL.
[inputs]: Add xcb-util-xrm and libxkbcommon.
* gnu/packages/patches/awesome-reproducible-png.patch: Adjust patch.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-26 19:13:27 -05:00
Ben Woodcroft 9916ef8bb6
gnu: diamond: Update to 0.8.30.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.30.
2016-12-27 09:18:05 +10:00
Leo Famulari c976b319fe
gnu: python-stem: Update to 1.5.3.
* gnu/packages/python.scm (python-stem, python2-stem): Update to 1.5.3.
[source]: Update URL.
2016-12-26 13:20:52 -05:00
Ben Woodcroft f1775db660
gnu: ruby-minitest: Update to 5.10.1.
* gnu/packages/ruby.scm (ruby-minitest): Update to 5.10.1.
2016-12-26 22:43:59 +10:00
Roel Janssen 328398e752
gnu: Add ripit.
* gnu/packages/cdrom.scm (ripit): New variable.
2016-12-26 12:58:29 +01:00
Roel Janssen fb222fb2b0
gnu: Add perl-cddb-get.
* gnu/packages/perl.scm (perl-cddb-get): New variable.
2016-12-26 12:45:48 +01:00
Alex Kost b2f1f7b0d9
gnu: emacs-guix: Update to 0.2.1.
* gnu/packages/emacs.scm (emacs-guix): Update to 0.2.1.
2016-12-26 13:53:53 +03:00
Efraim Flashner 9f74424f37
gnu: xf86-video-qxl: Update to 0.1.5.
* gnu/packages/xorg.scm (xf86-video-qxl): Update to 0.1.5.
2016-12-26 04:32:05 +02:00
Ricardo Wurmus 33ca551731
gnu: Add roffit.
* gnu/packages/groff.scm (roffit): New variable.
2016-12-25 22:02:39 +01:00
Efraim Flashner f077aa2b29
gnu: libevdev: Update to 1.5.5.
* gnu/packages/xorg.scm (libevdev): Update to 1.5.5.
[houme-page]: Use https.
2016-12-25 16:16:10 +02:00
Efraim Flashner db10a5e78a
gnu: libinput: Update to 1.5.3.
* gnu/packages/freedesktop.scm (libinput): Update to 1.5.3.
2016-12-25 16:16:00 +02:00
Marius Bakke 4a95b3882d
gnu: exim: Update to 4.87.1 [fixes CVE-2016-9963].
* gnu/packages/mail.scm (exim): Update to 4.87.1.
2016-12-25 13:53:17 +01:00
Taylan Ulrich Bayırlı/Kammer d02fb7cec6
gnu: leptonica: Update to 1.74.0.
* gnu/packages/image.scm (leptonica): Update to 1.74.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-25 13:48:57 +01:00
Efraim Flashner c88bee0ace
gnu: font-gnu-unifont: Update to 9.0.06.
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 9.0.06.
2016-12-25 05:04:20 +02:00
Leo Famulari 3a2bcac6bd
gnu: libxml2: Fix CVE-2016-5131.
* gnu/packages/patches/libxml2-CVE-2016-5131.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xml.scm (libxml2/fixed)[source]: Add it.
2016-12-24 19:19:36 -05:00
Leo Famulari 0c83c6bf26
gnu: libxml2: Fix CVE-2016-4658.
* gnu/packages/xml.scm (libxml2)[replacement]: New field.
(libxml2/fixed): New variable.
* gnu/packages/patches/libxml2-CVE-2016-4658.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-12-24 19:19:32 -05:00
Efraim Flashner daa481f59a
gnu: qt: Update to 5.7.1.
* gnu/packages/qt.scm (qtbase, qtsvg, qtimageformats, qtx11extras,
qtxmlpatterns, qtdeclarative, qtconnectivity, qtwebsockets, qtsensors,
qtmultimedia, qtwayland, qtserialport, qtwebchannel, qtlocation,
qttools, qtscript, qtquickcontrols, qtquickcontrols2, qtgraphicaleffects,
qtwebkit): Update to 5.7.1.
2016-12-25 01:49:36 +02:00
Efraim Flashner 457d154fdf
gnu: alsa-utils: Update to 1.1.3.
* gnu/packages/linux.scm (alsa-utils): Update to 1.1.3.
2016-12-25 01:47:22 +02:00
Efraim Flashner 7604106f2c
gnu: busybox: Update to 1.26.0.
* gnu/packages/busybox.scm (busybox): Update to 1.26.0.
[arguments]: Enable previously broken grep test.
2016-12-25 01:47:22 +02:00
Thomas Danckaert db82557013
gnu: netcdf: Enable HDF4 support.
* gnu/packages/maths.scm (netcdf)[inputs]: Add hdf4-alt and libjpeg.
  [arguments]: Add "--enable-hdf4" configure flag.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-24 14:41:50 +01:00
Marius Bakke f7fb34a06c
gnu: notmuch: Update to 0.23.4.
* gnu/packages/mail.scm (notmuch, python-notmuch, python2-notmuch): Update to
0.23.4.
2016-12-24 14:26:39 +01:00
Tobias Geerinckx-Rice b672e1ed1e
gnu: moreutils: Update to 5.9.
* gnu/packages/moreutils.scm (moreutils): Update to 5.9.
[source]: Update the fall-back Debian snapshot URL.
[inputs]: Move docbook-xml, docbook-xsl, libxml2, and libxslt from here...
[native-inputs]: ...to this new variable.
[arguments]: Delete the configure phase altogether.  Set the DOCBOOKXSL path
in #:make-flags instead.
[home-page]: Use HTTPS.
2016-12-24 03:19:03 +01:00
Tobias Geerinckx-Rice 4d2fd1c016
gnu: yadifa: Explicitly enable DNSSEC & caching.
* gnu/packages/dns.scm (yadifa)[arguments]: Add configure flags to
consistently enable the ‘nsec’, ‘nsec3’, ‘tsig’, and ‘caching’ features.
2016-12-23 23:54:15 +01:00
Tobias Geerinckx-Rice 8769d482ef
gnu: yadifa: Update to 2.2.3.
* gnu/packages/dns.scm (yadifa): Update to 2.2.3.
[version, source]: Remove monotonic revision number from the version
string.  Use it only to reconstruct the download URL.
2016-12-23 23:54:15 +01:00
Kei Kebreau eed2a95e9f
gnu: minetest: Update to 0.4.15.
* gnu/packages/games.scm (minetest-data, minetest): Update to 0.4.15.
2016-12-23 17:34:41 -05:00
Tobias Geerinckx-Rice 41d23dd1e2
gnu: btrfs-progs: Update to 4.9.
* gnu/packages/linux.scm (btrfs-progs): Update to 4.9.
2016-12-23 20:29:18 +01:00
ng0 50e9f81a22
gnu: gnurl: Split man pages to doc output.
* gnu/packages/gnunet.scm (gnurl)[arguments]: Add 'move-man3-pages' phase.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-23 11:58:03 -05:00
ng0 4ec08b637b
gnu: gnurl: Make tests more verbose.
* gnu/packages/gnunet.scm (gnurl)[arguments]: Replace the 'check' phase.
Move the 'disable-test1026' and 'patch-runtests' phases into 'check' phase.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-23 11:58:03 -05:00
ng0 a0e43c9fa7
gnu: gnurl: Update to 7.52.1 [fixes CVE-2016-{9586, 9952, 9953, 9594}].
* gnu/packages/gnunet.scm (gnurl): Update to 7.52.1.
[arguments]: Add 'autoconf' and 'disable-test1026' phases.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-23 11:58:02 -05:00
Chris Marusich 426e6083ae
gnu: Add asunder.
* gnu/packages/cdrom.scm (asunder): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-23 11:34:42 -05:00
Marius Bakke d0f1673dc3
gnu: dnscrypt-proxy: Update to 1.8.1.
* gnu/packages/dns.scm (dnscrypt-proxy): Update to 1.8.1.
2016-12-23 15:53:51 +01:00
Marius Bakke 14251e30c4
gnu: curl: Update replacement to 7.52.1 [fixes CVE-2016-{9586,9594}].
* gnu/packages/curl.scm (curl)[replacement]: Update to 7.52.1.
[home-page]: Use HTTPS.
(curl-7.51.0): Replace with ...
(curl-7.52.1): ... this.
2016-12-23 15:31:36 +01:00
Bake Timmons b881dc6d98
gnu: Add wwwoffle.
* gnu/packages/web.scm (wwwoffle): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-23 15:18:02 +01:00
Thomas Danckaert d205f895ca
gnu: Add python-hdf4.
* gnu/packages/python.scm (python-hdf4, python2-hdf4): New variables.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2016-12-23 14:51:56 +01:00
Leo Famulari 4b4ff6938d
gnu: qsyncthingtray: Update to 0.5.7.
* gnu/packages/sync.scm (qsyncthingtray): Update to 0.5.7.
2016-12-23 02:01:28 -05:00
Kei Kebreau e813f3956e
gnu: xonsh: Fix description.
* gnu/packages/shells.scm (xonsh)[description]: Two spaces after a period.
2016-12-22 18:06:56 -05:00
Efraim Flashner a532a6711e
gnu: qtimageformats: Add jasper support.
* gnu/packages/qt.scm (qtimageformats)[inputs]: Add jasper.
2016-12-23 01:01:27 +02:00
Stefan Reichör 572ee05c31
gnu: xonsh: Update to 0.5.0.
* gnu/packages/shells.scm (xonsh): Update to 0.5.0.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2016-12-22 17:59:41 -05:00
Marius Bakke 059b3aa9c3
gnu: gnupg: Fix build on 32-bit architectures.
* gnu/packages/patches/gnupg-test-segfault-on-32bit-arch.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnupg.scm (gnupg)[source]: Use it.
2016-12-22 15:05:50 +01:00
Ricardo Wurmus 8e401ab6db
gnu: python-scikit-learn: Update to 0.18.1.
* gnu/packages/python.scm (python-scikit-learn): Update to 0.18.1.
[arguments]: Remove special "check" phase.
[native-inputs]: Add python-cython.
2016-12-22 13:19:20 +01:00
Leo Famulari 8bf4a6aecd
gnu: shotwell: Update to 0.25.2.
* gnu/packages/gnome.scm (shotwell): Update to 0.25.2.
2016-12-22 02:54:42 -05:00
Leo Famulari 5d97f4c74a
gnu: libssh2: Update to 1.8.0.
* gnu/packages/ssh.scm (libssh2): Update to 1.8.0.
2016-12-22 00:17:54 -05:00
Efraim Flashner 5d0ebcc4cf
gnu: gcc: Update to 6.3.0.
* gnu/packages/gcc.scm (gcc): Update to 6.3.0.
2016-12-22 02:53:24 +02:00
Efraim Flashner 0d1baed223
gnu: abcde: Add flac support.
* gnu/packages/cdrom.scm (abcde)[inputs]: Add flac.
[arguments]: Wrap the bunary with flac's bin dir also.
2016-12-22 02:53:19 +02:00
Ricardo Wurmus 590b80d29a
Merge branch 'version-0.12.0' 2016-12-21 23:33:18 +01:00
John Darrington d1f3063196
gnu: Fix typo in comment.
* gnu/services/sddm.scm: Fix typo.
2016-12-21 20:45:34 +01:00
Efraim Flashner d229ba9502
gnu: qemu: Update to 2.8.0.
* gnu/packages/qemu.scm (qemu): Update to 2.8.0.
[source]: Remove patches.
[arguments]: Set host_cc during 'configure.
* gnu/packages/patches/qemu-CVE-2016-8576.patch,
gnu/packages/patches/qemu-CVE-2016-8577.patch,
gnu/packages/patches/qemu-CVE-2016-8577.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2016-12-21 21:28:15 +02:00
Julien Lepiller 4da696877c
gnu: coq: Build coqide
* gnu/packages/ocaml.scm (coq): Build coqide.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-21 17:54:18 +01:00
Julien Lepiller 8afd19585f
gnu: lablgtk: use ocamlfind in installation
* gnu/packages/ocaml.scm (lablgtk): Use ocamlfind in installation.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-21 17:54:18 +01:00
Julien Lepiller 054fea97b7
gnu: lablgtk: Update to 2.18.5
* gnu/packages/ocaml.scm (lablgtk): Update to 2.18.5.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-21 17:54:18 +01:00
Leo Famulari c8c385a04a
Revert "gnu: curl: Update replacement to 7.52.0 [fixes CVE-2016-{9586,9952,9953}]."
The curl maintainers said this about 7.52.0:

"Attention! We will release a patch update within a few days to fix a
serious security problem found in curl 7.52.0. You may consider holding
off until then."

This message was displayed at <https://curl.haxx.se/download.html> on
2016-12-21.

This reverts commit 42366b35c3.
2016-12-21 11:52:36 -05:00
Tobias Geerinckx-Rice f05f5b307e
gnu: mlt: Update to 6.4.1.
* gnu/packages/video.scm (mlt): Update to 6.4.1.
2016-12-21 16:37:01 +01:00
Tobias Geerinckx-Rice 9fa7284155
gnu: jsoncpp: Update to 1.8.0.
* gnu/packages/serialization.scm (jsoncpp): Update to 1.8.0.
2016-12-21 16:37:01 +01:00
Tobias Geerinckx-Rice e177f819c0
gnu: xf86-video-vmware: Update to 13.2.1.
* gnu/packages/xorg.scm (xf86-video-vmware): Update to 13.2.1.
[native-inputs]: Add eudev.
2016-12-21 16:37:00 +01:00
Tobias Geerinckx-Rice 7aef9930f0
gnu: xcb-util-xrm: Update to 1.2.
* gnu/packages/xdisorg.scm (xcb-util-xrm): Update to 1.2.
2016-12-21 16:37:00 +01:00
Tobias Geerinckx-Rice 82f44a36e4
gnu: xcape: Update to 1.2.
* gnu/packages/xdisorg.scm (xcape): Update to 1.2.
2016-12-21 16:37:00 +01:00
Marius Bakke 42366b35c3
gnu: curl: Update replacement to 7.52.0 [fixes CVE-2016-{9586,9952,9953}].
* gnu/packages/curl.scm (curl)[replacement]: Update to 7.52.0.
(curl-7.51.0): Replace with ...
(curl-7.52.0): ... this.
2016-12-21 14:56:34 +01:00
Ludovic Courtès 7af6ecab6e
gnu: guix: Really skip "pivot-root" test.
This is a followup to fe9bdb581e (which
introduced 'test-equal' for the "pivot-root" test) and to
198eac2bca (which updated the regexps for
skipped tests.)

* gnu/packages/package-management.scm (guix-0.12.0)[arguments]: In
'disable-container-tests' phase, add "test-equal" to the regexp, so that
"pivot-root" is really skipped.
2016-12-21 14:28:28 +01:00
Ricardo Wurmus 7aa8785c41
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to b291b327.
2016-12-21 10:32:17 +01:00
Ludovic Courtès b291b3271a
gnu: linux-libre: Avoid invalid "kconfig" input on armhf and mips64el.
This fixes a bug whereby:

  guix build linux-libre -s armhf-linux

would fail with:

  guix build: error: gnu/packages/linux.scm:231:2: package `linux-libre-4.8.15' has an invalid input: ("kconfig" #f)

This led 'tests/guix-system.sh' to fail.

* gnu/packages/linux.scm (make-linux-libre)[native-inputs]: Never add #f
as a "kconfig" input.
2016-12-21 10:22:32 +01:00
Leo Famulari 6a148b9db5
gnu: imagemagick: Update to 6.9.7-0.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.7-0.
2016-12-20 20:50:50 -05:00
Marius Bakke 21eced80a0
gnu: nmap: Update to 7.40.
* gnu/packages/admin.scm (nmap): Update to 7.40.
2016-12-21 00:14:08 +01:00
Ludovic Courtès 64b5e41376
gnu: linux-libre: Avoid invalid "kconfig" input on armhf and mips64el.
This fixes a bug whereby:

  guix build linux-libre -s armhf-linux

would fail with:

  guix build: error: gnu/packages/linux.scm:231:2: package `linux-libre-4.8.15' has an invalid input: ("kconfig" #f)

This led 'tests/guix-system.sh' to fail.

* gnu/packages/linux.scm (make-linux-libre)[native-inputs]: Never add #f
as a "kconfig" input.
2016-12-20 23:39:30 +01:00
Efraim Flashner 899358d18a
gnu: msmtp: Update to 1.6.6.
* gnu/packages/mail.scm (msmtp): Update to 1.6.6.
2016-12-20 22:43:07 +02:00
Efraim Flashner 837ca0f071
gnu: getmail: Update to 4.52.0.
* gnu/packages/mail.scm (getmail): Update to 4.52.0.
2016-12-20 22:43:06 +02:00
Efraim Flashner c55fa42b2d
gnu: bogofilter: Use 'modify-phases'.
* gnu/packages/mail.scm (bogofilter)[arguments]: Use 'modify-phases'.
2016-12-20 22:43:06 +02:00
Efraim Flashner 329e0a9ca0
gnu: mutt: Update to 1.7.2.
* gnu/packages/mail.scm (mutt): Update to 1.7.2.
2016-12-20 22:43:06 +02:00
Efraim Flashner de75f0b1bf
gnu: mailutils: Use 'modify-phases' syntax.
* gnu/packages/mail.scm (mailutils)[arguments]: Use 'modify-phases'.
2016-12-20 22:43:06 +02:00
Efraim Flashner abe5d2dc8d
gnu: mailutils: Update to 3.1.1.
* gnu/packages/mail.scm (mailutils): Update to 3.1.1.
[inputs]: Build with current readline.
[arguments]: Set sysconfdir as /etc.
[home-page]: Use https.
2016-12-20 22:43:05 +02:00
Efraim Flashner e31d35de3f
gnu: gnupg: Remove unneeded input.
* gnu/packages/gnupg.scm (gnupg)[inputs]: Remove adns.
2016-12-20 22:43:01 +02:00
Leo Famulari 8cb3e7e7de
gnu: borg: Update to 1.0.9.
* gnu/packages/backup.scm (borg): Update to 1.0.9.
[arguments]: Run the check phase in its own directory. Skip the test
'test_get_security_dir'.
2016-12-20 14:50:19 -05:00
Leo Famulari 4f6ff977c2
gnu: nss: Add comment about test failures in NSS 3.27.2
* gnu/packages/gnuzilla.scm (nss): Add comment.
2016-12-20 14:44:53 -05:00
Leo Famulari 6eda11de44
Revert "gnu: nss, nss-certs: Update to 3.27.2."
This reverts commit 7ab3ea4266.
2016-12-20 14:35:21 -05:00
Ricardo Wurmus 62a3179395
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to c8e2219c.
(guix): Set to GUIX-DEVEL.
2016-12-20 18:06:00 +01:00
Ricardo Wurmus c8e2219cfb
gnu: guix: Update to 0.12.0.
* gnu/packages/package-management.scm (guix-0.11.0): Rename to...
(guix-0.12.0): ... this.  Adjust users.
(guix): Set to GUIX-0.12.0.
2016-12-20 17:58:06 +01:00
ng0 7d2511bc6b
gnu: Add alsa-plugins.
* gnu/packages/linux.scm (alsa-plugins): New variable.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2016-12-20 10:22:06 -05:00
Marius Bakke 06fcd4a89e
gnu: gnupg: Update to 2.1.17.
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.17.
2016-12-20 15:48:24 +01:00
Ludovic Courtès 38d6aa05e2
services: cuirass: Add Cuirass to the system profile.
* gnu/services/cuirass.scm (cuirass-service-type): Extend
PROFILE-SERVICE-TYPE.
2016-12-20 10:27:08 +01:00
Ludovic Courtès 379b6ba5a9
services: cuirass: Add 'cuirass' field.
* gnu/services/cuirass.scm (<cuirass-configuration>)[cuirass]: New
field.
(cuirass-shepherd-service): Honor it.
* doc/guix.texi (Continuous Integration): Document it.
2016-12-20 10:27:08 +01:00
Ludovic Courtès 4a78638f1f
gnu: cuirass: Make sure 'cuirass' has 'evaluate' in $PATH.
* gnu/packages/ci.scm (cuirass)[arguments]: Add OUT/bin to 'PATH'.
2016-12-20 10:27:08 +01:00
Ludovic Courtès 137f8df66c
services: cuirass: Create the database directory.
* gnu/services/cuirass.scm (cuirass-activation): Create the database
directory for CONFIG.
2016-12-20 10:27:08 +01:00
John Darrington 8c4e99cca3
gnu: Fix load-extension path in packaging of guile-ncurses.
* gnu/packages/guile.scm (guile-ncurses) [arguments]: Install shared object before
attempting to build the package.  Patch load-extension path before building instead
of after.
2016-12-20 06:43:29 +01:00
Tobias Geerinckx-Rice 1feeb2e035
gnu: argon2: Update to 20161029.
* gnu/packages/password-utils.scm (argon2): Update to 20161029.
2016-12-20 05:36:58 +01:00
Tobias Geerinckx-Rice 934ba12f3d
gnu: cppcheck: Update to 1.76.1.
* gnu/packages/check.scm (cppcheck): Update to 1.76.1.
2016-12-20 05:36:58 +01:00
Tobias Geerinckx-Rice 17c2294c24
gnu: hunspell: Add missing perl dependency.
* gnu/packages/libreoffice.scm (hunspell)[inputs]: Add perl dependency
for ispellaff2myspell.
2016-12-20 05:36:58 +01:00
Tobias Geerinckx-Rice 4dec10baa8
gnu: hunspell: Update to 1.5.4.
* gnu/packages/libreoffice.scm (hunspell): Update to 1.5.4.
[source]: Add a file-name.
2016-12-20 05:36:57 +01:00
Tobias Geerinckx-Rice d36935cdd1
gnu: Add Ancient Greek Aspell dictionary.
* gnu/packages/aspell.scm (aspell-dict-grc): New variable.
2016-12-20 05:36:57 +01:00
Tobias Geerinckx-Rice 707ee32471
gnu: aspell-dictionary: Use ‘modify-phases’ syntax.
* gnu/packages/aspell.scm (aspell-dictionary)[arguments]: Use
‘modify-phases’.
2016-12-20 05:36:57 +01:00
Tobias Geerinckx-Rice f87b8e25c3
gnu: weechat: Use new xz-compressed tarball.
* gnu/packages/irc.scm (weechat)[source]: Use ‘.tar.xz’ source.
2016-12-20 05:36:56 +01:00
Tobias Geerinckx-Rice 33d5b2464d
gnu: cutadapt: Use ‘modify-phases’ syntax.
* gnu/packages/bioinformatics.scm (cutadapt)[arguments]: Use
‘modify-phases’.
2016-12-20 05:36:55 +01:00
Efraim Flashner 2fb5af2c2b
gnu: enlightenment: Update to 0.21.5.
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.21.5.
2016-12-20 04:22:29 +02:00
Efraim Flashner 0870372159
gnu: tor: Update to 0.2.9.8.
* gnu/packages/tor.scm (tor): Update to 0.2.9.8.
2016-12-20 03:55:38 +02:00
Ludovic Courtès dc0ef095b3
services: guix: Add 'log-file' configuration option.
* gnu/services/base.scm (<guix-configuration>)[log-file]: New field.
(guix-shepherd-service): Pass #:log-file to 'make-forkexec-constructor'.
* gnu/services/admin.scm (simple-rotation-config): Take a list of
files and join them with commas.
(%default-rotations): Add /var/log/guix-daemon.log.
* doc/guix.texi (Base Services): Document it.
2016-12-19 23:57:20 +01:00
Ludovic Courtès f78903f363
services: guix: Remove dependency on lsh.
* gnu/services/base.scm (<guix-configuration>)[lsh]: Remove.
(guix-shepherd-service): Remove lsh from 'PATH'.
* doc/guix.texi (Base Services): Adjust accordingly.
2016-12-19 23:57:19 +01:00
Ludovic Courtès 463995da0c
services: cuirass: Cache defaults to /var/cache/cuirass.
The previous default value depended on the 'HOME' environment variable,
which happened to be unset.  Thus, /.cache was being used.

* gnu/services/cuirass.scm (<cuirass-configuration>)[cache-directory]:
Change default value to "/var/cache/cuirass".
(cuirass-shepherd-service): Always pass "--cache-directory".
(cuirass-activation): New procedure.
(cuirass-service-type): Use it as an extension to
ACTIVATION-SERVICE-TYPE.
* doc/guix.texi (Continuous Integration): Adjust accordingly.
2016-12-19 23:57:19 +01:00
Ludovic Courtès 831071b84f
services: cuirass: Honor 'user' and 'group'.
* gnu/services/cuirass.scm (cuirass-shepherd-service): Pass the user and
group of CONFIG to 'make-forkexec-constructor'.
2016-12-19 23:57:19 +01:00
Ludovic Courtès b17e326f17
services: cuirass: Add 'log-file' option.
* gnu/services/cuirass.scm (<cuirass-configuration>)[log-file]: New
field.
(cuirass-shepherd-service): Pass it to 'make-forkexec-constructor'.
2016-12-19 23:57:19 +01:00
Ludovic Courtès 2eadd8285a
gnu: cuirass: Add Git to 'PATH'.
* gnu/packages/ci.scm (cuirass)[arguments]: In 'wrap-program' phase, add
Git to 'PATH'.
[inputs]: Add GIT.
2016-12-19 23:57:18 +01:00
ng0 c27b31e8d2
gnu: utox: Fix description.
* gnu/packages/messaging.scm (utox): Fix description.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-19 23:57:18 +01:00
ng0 c413c6ade8
gnu: utox: Update to 0.11.0.
* gnu/packages/messaging.scm (utox): Update to 0.11.0.
[source]: Update source uri to new group namespace on github.
[build-system]: Change to cmake-build-system.
[arguments]: Remove previous content and disable tests,
add two new phases.
[inputs]: Remove libtoxcore, add c-toxcore.
[native-inputs]: Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-19 23:57:18 +01:00
ng0 0ed5554a01
gnu: Add c-toxcore.
* gnu/packages/messaging.scm (c-toxcore): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-19 23:57:18 +01:00
Ludovic Courtès 58b21e1e09
install: The list of services is now a plain list.
* gnu/system/install.scm (installation-services): Rename to...
(%installation-services): ... this.  Turn into a list instead of a thunk.
2016-12-19 23:57:18 +01:00
Marius Bakke acb5f7c3fc
gnu: Add grub-efi.
* gnu/packages/grub.scm (grub-efi): New variable.
2016-12-19 23:43:47 +01:00
Marius Bakke 7d0910d4a7
Revert "gnu: grub: Add dependency on efibootmgr."
This reverts commit 3eee16130d.

Reverted in favor of separate grub-efi package. See discussion at
https://lists.gnu.org/archive/html/guix-devel/2016-12/msg00765.html .
2016-12-19 23:43:47 +01:00
Marius Bakke 7d8f7ab9be
gnu: grub: Use qemu-minimal for tests.
* gnu/packages/grub.scm (qemu-for-tests): Remove variable.
(grub)[native-inputs]: Replace QEMU-FOR-TESTS with QEMU-MINIMAL.
2016-12-19 23:43:09 +01:00
Tobias Geerinckx-Rice 8d1ef002ee
gnu: linux-libre: Fix typo.
* gnu/packages/linux.scm (%linux-libre-hash): Remove excess quote.
2016-12-19 20:42:19 +01:00
Tobias Geerinckx-Rice 1f94bff2d4
gnu: cutadapt: Update to 1.12.
* gnu/packages/bioinformatics.scm (cutadapt): Update to 1.12.
[inputs]: Add python-xopen.
2016-12-19 20:33:32 +01:00
Tobias Geerinckx-Rice 361a2fcf8d
gnu: Add python-xopen.
* gnu/packages/python.scm (python-xopen, python2-xopen): New variables.
2016-12-19 20:33:31 +01:00
Mark H Weaver 565775399e
gnu: linux-libre: Update to 4.8.15.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.15.
2016-12-19 14:07:27 -05:00
Mark H Weaver 9cedffe5db
Revert "gnu: linux-libre: Update to 4.9."
This reverts commit 5a3849443a.

Module loading is broken on i686 with some configurations, including our
default configuration.  See <https://bugs.gnu.org/25231>.
2016-12-19 14:03:41 -05:00
Thomas Danckaert 834d12226b
gnu: kdbusaddons: Embed kinit store dir, avoid dependency cycles.
kdbusaddons needs to know the location of the kdeinit5 executable,
provided by kinit. kinit depends on kdbusaddons, so we add bootstrap
versions of all packages in the dependency chain from kinit to
kdbusaddons to avoid cyclic dependencies.

* gnu/packages/kde-frameworks.scm (kinit-bootstrap,
  kdbusaddons-bootstrap): New variables.
  (kdbusaddons)[inputs]: Add kinit-bootstrap.
  [source,arguments]: Add patch and substitution to embed
  kinit-bootstrap's store directory in the code.
* gnu/packages/patches/kdbusaddons-kinit-file-name.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-19 17:51:00 +01:00
Ludovic Courtès 9fc037fe10
services: Use 'file-append' in more places.
* gnu/services/avahi.scm (avahi-shepherd-service): Use #$(file-append x y)
instead of (string-append #$x y).
* gnu/services/base.scm (unicode-start)
(console-keymap-service-type, console-font-shepherd-services)
(mingetty-shepherd-service, nscd-shepherd-service)
(hydra-key-authorization, guix-shepherd-service)
(guix-publish-shepherd-service, udev-shepherd-service)
(gpm-shepherd-service, <kmscon-configuration>)
(kmscon-service-type): Likewise.
* gnu/services/shepherd.scm (shepherd-boot-gexp): Likewise.
2016-12-19 17:51:00 +01:00
Leo Famulari 43686dcb2f
gnu: openssh: Update to 7.4p1.
* gnu/packages/ssh.scm (openssh): Update to 7.4p1.
[source]: Remove 'openssh-memory-exhaustion.patch'.
* gnu/packages/patches/openssh-memory-exhaustion.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-12-19 10:54:11 -05:00
Leo Famulari 307349f6f7
gnu: samba: Update to 4.5.3 [fixes CVE-2016-{2123,2125,2126}].
* gnu/packages/samba.scm (samba): Update to 4.5.3.
2016-12-19 09:50:02 -05:00
Marius Bakke 94a84d8367
gnu: pcsc-lite: Update to 1.8.19.
* gnu/packages/security-token.scm (pcsc-lite): Update to 1.8.19.
2016-12-19 14:27:33 +01:00
Manolis Ragkousis be6a70edc2
gnu: hurd-headers: Update to 0.9.
* gnu/packages/hurd.scm (hurd-headers): Update to version 0.9.
2016-12-19 12:04:48 +02:00
Manolis Ragkousis 9c9402be2e
gnu: mig: Update to 1.8.
* gnu/packages/hurd.scm (mig): Update to version 1.8.
2016-12-19 12:04:43 +02:00
Manolis Ragkousis d950f03848
gnu: gnumach-headers: Update to 1.8.
* gnu/packages/hurd.scm (gnumach-headers): Update to version 1.8.
2016-12-19 12:04:21 +02:00
Kei Kebreau 5f80054053
gnu: gnuplot: Update to 5.0.5.
* gnu/packages/maths.scm (gnuplot): Update to 5.0.5.
2016-12-18 23:27:43 -05:00
Kei Kebreau 5a2604bfb6
gnu: wxmaxima: Update to 16.12.0.
* gnu/packages/maths.scm (wxmaxima): Update to 16.12.0.
2016-12-18 14:05:40 -05:00
Kei Kebreau 55b2756906
gnu: tor: split description into two parts for easier reading.
* gnu/packages/tor.scm (tor)[description]: Split it.
2016-12-18 13:00:11 -05:00
Kei Kebreau 4a652c78d4
gnu: maxima: Update to 5.39.0.
* gnu/packages/maths.scm (maxima): Update to 5.39.0.
2016-12-18 12:57:09 -05:00
Marius Bakke 0599416520
gnu: mumble: Update to 1.2.18.
* gnu/packages/telephony.scm (mumble): Update to 1.2.18.
2016-12-18 16:53:21 +01:00
Hartmut Goebel 00e0ca7ccb
gnu: python-docutils: Update to 0.13.1
* gnu/packages/python.scm(python-docutils): Update to 0.13.1.
[source]: Use pypi-uri.
2016-12-18 16:31:35 +01:00
Marius Bakke 866872aa71
linux-initrd: Support FAT filesystems.
* gnu/system/linux-initrd.scm (base-initrd): When a FAT filesystem is
present: Add fatfsck/static in 'helper-packages'; and add nls_iso8859-1
in 'linux-modules'.
2016-12-18 13:18:47 +01:00
Ludovic Courtès 8a4c988892
build: check-final-inputs-self-contained has an exception for 'bash:include'.
Currently 'bash:include' of the final Bash depends on bootstrap stuff.

* build-aux/check-final-inputs-self-contained.scm (final-inputs): Add
clause for 'bash:include'.
* gnu/packages/commencement.scm (bash-final): Add FIXME comment.
2016-12-18 12:37:26 +01:00
Ricardo Wurmus 5073ecf055
gnu: yoshimi: Update to 1.5.0.
* gnu/packages/music.scm (yoshimi): Update to 1.5.0.
2016-12-18 12:00:33 +01:00
Nicolas Goaziou 36a318adc7
gnu: emacs-org: Update to 20161214.
* gnu/packages/emacs.scm (emacs-org): Update to 20161214.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2016-12-18 17:05:45 +08:00
Leo Famulari 51d8395ac6
gnu: youtube-dl: Update to 2016.12.15.
* gnu/packages/video.scm (youtube-dl): Update to 2016.12.15.
2016-12-17 20:27:21 -05:00
Raoul Bonnal a1814e4a27
gnu: r: Update to 3.3.2.
* gnu/packages/statistics.scm (r): Update to 3.3.2.
2016-12-18 10:02:52 +10:00
Ben Woodcroft 3fffabce2a
gnu: Add attribution line for Raoul Bonnal.
This is a follow-up commit to c9e9154e99.

* gnu/packages/bioinformatics.scm: Add attribution.
2016-12-18 10:01:04 +10:00
Ludovic Courtès a32d0c8304
gnu: sane-backends: Remove timestamps from the output.
* gnu/packages/scanner.scm (sane-backends-minimal)[source](modules, snippet):
New fields.
2016-12-17 23:13:05 +01:00
Andy Patterson 4c92874328
gnu: Add and use sane-backends.
* gnu/packages/scanner.scm (sane-backends): New variable.
* gnu/packages/gnome.scm (colord, simple-scan): Use it instead of
'sane-backends-minimal'.
* gnu/packages/libreoffice.scm (libreoffice): Likewise.
* gnu/packages/wine.scm (wine): Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-17 23:13:05 +01:00
Andy Patterson 32aa37a2e7
gnu: Add and use sane-backends-minimal.
* gnu/packages/scanner.scm (sane-backends): Rename to...
(sane-backends-minimal): this. Adjust name, source, synopsis and
description accordingly.
* gnu/packages/cups.scm (hplip): Use 'sane-backends-minimal' instead of
'sane-backends'.
* gnu/packages/gnome.scm (colord, simple-scan): Likewise.
* gnu/packages/libreoffice.scm (libreoffice): Likewise.
* gnu/packages/wine.scm (wine): Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-17 23:13:04 +01:00
Andy Patterson 33a14e29f9
gnu: sane-backends: Disable backend generation.
* gnu/packages/scanner.scm (sane-backends)[arguments]: Add a phase to
disable the compilation of backends.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-17 23:13:04 +01:00
Leo Famulari 9b1d77f6d4
gnu: pinentry: Update to 1.0.0.
* gnu/packages/gnupg.scm (pinentry-tty, pinentry-gtk2, pinentry-gnome3,
pinentry-qt): Update to 1.0.0.
2016-12-17 13:40:42 -05:00
Leo Famulari 402efb61d3
gnu: npth: Update to 1.3.
* gnu/packages/gnupg.scm (npth): Update to 1.3.
2016-12-17 13:40:42 -05:00
Ludovic Courtès d44fb7dd60
gnu: bootstrap: Add FTP URL for bootstrap binaries.
* gnu/packages/bootstrap.scm (%bootstrap-base-urls): Add
ftp://alpha.gnu.org (http://alpha.gnu.org is currently unresponsive.)
2016-12-17 14:46:42 +01:00
Raoul Bonnal c9e9154e99
gnu: star: Update to 2.5.2b.
* gnu/packages/bioinformatics (star): Update to 2.5.2b.
[source]: Delete precompiled binary.

Co-authored-by: Ben Woodcroft <donttrustben@gmail.com>
2016-12-17 23:26:35 +10:00
Marius Bakke 51ad11ad62
gnu: Add fatfsck-static.
* gnu/packages/disk.scm (dosfstools/static): New private variable.
(fatfsck/static): New variable.
2016-12-17 10:13:22 +01:00
Alex Kost 64e43c674e
gnu: Add emacs-guix.
* gnu/packages/emacs.scm (emacs-guix): New variable.
2016-12-17 10:56:39 +03:00
Alex Kost 753baf775f
gnu: Add emacs-bui.
* gnu/packages/emacs.scm (emacs-bui): New variable.
2016-12-17 10:56:39 +03:00
Leo Famulari e02f1473da
gnu: libgcrypt: Update to 1.7.5.
* gnu/packages/gnupg.scm (libgcrypt): Update to 1.7.5.
2016-12-17 00:56:48 -05:00
Leo Famulari c7ec7c9926
gnu: imagemagick: Update to 6.9.6-8.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.6-8.
2016-12-17 00:46:48 -05:00
Leo Famulari 7c1a7bf484
gnu: acme-client: Provide path to certificates.
* gnu/packages/tls.scm (acme-client)[arguments]: Add 'patch-paths' phase.
2016-12-17 00:09:10 -05:00
Leo Famulari f8faf537ca
gnu: libupnp: Fix CVE-2016-8863.
* gnu/packages/patches/libupnp-CVE-2016-8863.patch: New file.
* gnu/local.mk (dist_patch_DATA): Use it.
* gnu/packages/libupnp.scm (libupnp)[source]: Use it.
2016-12-16 15:28:02 -05:00
Theodoros Foradis 850812decf
gnu: Add Greek Aspell dictionary
* gnu/packages/aspell.scm (aspell-dict-el): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-16 18:04:55 +01:00
Ludovic Courtès f731529e2a
install: Add dosfstools.
* gnu/system/install.scm (installation-os)[packages]: Add DOSFSTOOLS.
2016-12-16 17:37:28 +01:00
ng0 fc9286d03a
gnu: tor: Recommend torsocks.
* gnu/packages/tor.scm (tor)[description]: Recommend torsocks.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
2016-12-16 10:49:01 -05:00
Ludovic Courtès 3eee16130d
gnu: grub: Add dependency on efibootmgr.
Suggested by Marius Bakke <mbakke@fastmail.com>.

* gnu/packages/grub.scm (grub)[arguments]: In 'patch-stuff', set
efibootmgr absolute file name in 'platform.c'.
[inputs]: Add EFIBOOTMGR.
2016-12-16 14:45:56 +01:00
Tobias Geerinckx-Rice c8502d9ec1
Revert "gnu: kmod: Update to 23."
This should have been pushed to the ‘staging’ branch first.

This reverts commit 1e1cd41629.
2016-12-16 12:19:50 +01:00
Tobias Geerinckx-Rice 68ea090b93
gnu: libcap: Update to 2.25.
* gnu/packages/linux.scm (libcap): Update to 2.25.
2016-12-16 03:09:13 +01:00
Tobias Geerinckx-Rice 7c58c852c4
gnu: libraw1394: Update to 2.1.2.
* gnu/packages/linux.scm (libraw1394): Update to 2.1.2.
2016-12-16 03:08:43 +01:00
Tobias Geerinckx-Rice 1e1cd41629
gnu: kmod: Update to 23.
* gnu/packages/linux.scm (kmod): Update to 23.
2016-12-16 03:08:42 +01:00
Tobias Geerinckx-Rice 3fe7cb872a
gnu: ethtool: Update to 4.8.
* gnu/packages/networking.scm (ethtool): Update to 4.8.
2016-12-16 03:08:42 +01:00
Tobias Geerinckx-Rice 7d162df8ce
gnu: mcelog: Update to 146.
* gnu/packages/linux.scm (mcelog): Update to 146.
2016-12-16 03:08:41 +01:00
Mark H Weaver 0eb36dd17f
gnu: linux-libre@4.4: Update to 4.4.39.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.39.
2016-12-15 20:35:24 -05:00
Leo Famulari fb73f07a0f
gnu: guile-irregex: Update to 0.9.6 [fixes CVE-2016-9954].
* gnu/packages/guile.scm (guile-irregex): Update to 0.9.6.
2016-12-15 18:40:19 -05:00
Mathieu Lirzin 57aa94bd7e
services: cuirass: Put specifications in the store.
* gnu/services/cuirass.scm (<cuirass-configuration>): Change type of
'specifications' field to an alist to match the documentation example.
(cuirass-shepherd-service): Store the provided specifications in a file.  Use
that file as the "--specification" argument.
2016-12-15 22:50:27 +01:00
Mathieu Lirzin 44ccd9622e
gnu: cuirass: Update to revision 2.
* gnu/packages/ci.scm (cuirass): Update to revision 2.
[native-inputs]: Add texinfo.
2016-12-15 22:50:24 +01:00
Tobias Geerinckx-Rice 177de53784
gnu: libpsl: Update to 0.16.0.
* gnu/packages/web.scm (libpsl): Update to 0.16.0.
2016-12-15 21:05:05 +01:00
Tobias Geerinckx-Rice 426aecfd48
gnu: openconnect: Update to 7.08.
* gnu/packages/vpn.scm (openconnect): Update to 7.09.
2016-12-15 19:31:45 +01:00
John Darrington 7d73b2c6d0
gnu: Add system test for the rpcbind-daemon service.
* gnu/tests/nfs.scm: New file.
* gnu/local.mk: Add it.
2016-12-15 19:13:46 +01:00
Thomas Danckaert 7781afde65
gnu: Add kdevelop.
* gnu/packages/kde.scm (kdevelop): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-15 17:11:32 +01:00
Thomas Danckaert c02c8cf4a8
gnu: Add kdevplatform.
* gnu/packages/kde.scm (kdevplatform): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-15 17:09:27 +01:00
Thomas Danckaert 7c1a52090d
gnu: libksysguard: Correct inputs.
* gnu/packages/kde.scm (libksysguard)[inputs]: Remove kdbusaddons,
  kdoctools, kinit, knewstruff, knotifications, kio; add kauth,
  kcompletion, kconfig, kcoreaddons, kwidgetsaddons.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-15 17:06:49 +01:00
Christopher Baines e05b780a58
services: postgresql: Add locale to configuration
* gnu/services/databases.scm (<postgresql-configuration>): Add locale
  field.
  (postgresql-shepherd-service): Pass locale to initdb.
  (postgresql-service): Add locale default.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-15 16:55:02 +01:00
Christopher Baines 2d3d5cc5ea
services: postgresql: Add port to configuration
* gnu/services/databases.scm (<postgresql-configuration>): Add port
  field.
  (postgresql-shepherd-service): Pass port to postgres.
  (postgresql-service): Add port default.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-15 16:54:22 +01:00
Chris Marusich eee7878f4e
gnu: gnome-settings-daemon: Add dependency on NetworkManager.
* gnu/packages/gnome.scm (gnome-settings-daemon)[arguments]: Remove
"--disable-network-manager".
[inputs]: Add NETWORK-MANAGER.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-15 16:51:11 +01:00
Chris Marusich fd070f35d3
gnu: network-manager: Enable session tracking with elogind.
* gnu/packages/gnome.scm (network-manager): Add configuration options
  "--with-systemd-logind=yes" (so we can use elogind to track login sessions)
  and "--with-consolekit=no" (so we don't use consolekit to track sessions,
  since it isn't packaged yet).  Add elogind as an input, and add a snippet to
  replace some references to systemd with elogind.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-15 16:50:48 +01:00
Mark H Weaver 48ef3f9d9c
gnu: icecat: Label patches that have since been assigned CVEs.
Document that the following CVEs are fixed: CVE-2016-9893, CVE-2016-9895,
CVE-2016-9897, CVE-2016-9898, CVE-2016-9899, CVE-2016-9900, CVE-2016-9901,
CVE-2016-9902, CVE-2016-9904, and CVE-2016-9905.  Note that these are all of
the CVEs fixed in Firefox ESR 45.6.

* gnu/packages/gnuzilla.scm (icecat)[source]: Add comments to patches that
have since been assigned CVEs.
2016-12-14 19:55:26 -05:00
Tobias Geerinckx-Rice 0c6c9c00ab
gnu: Update more dead Google Code home pages.
* gnu/packages/bioinformatics.scm (cutadapt, mosaik, pepr)[home-page]:
Update to their respective replacements.
2016-12-14 22:08:51 +01:00
Tobias Geerinckx-Rice 62d652a710
gnu: mdds: Replace dead Google Code home-page.
* gnu/packages/boost.scm (mdds)[home-page]: Update it.
2016-12-14 21:59:40 +01:00
Tobias Geerinckx-Rice 50995554f8
gnu: chibi-scheme: Replace dead Google Code home-page.
* gnu/packages/scheme.scm (chibi-scheme)[home-page]: Update it.
2016-12-14 21:59:39 +01:00
Tobias Geerinckx-Rice 6b7877e12c
gnu: python-mock: Update source and home-page URIs.
* gnu/packages/python.scm (python-mock)[source]: Use ‘pypi-uri’.
[home-page]: Replace dead Google Code home page.
2016-12-14 21:59:39 +01:00
Ricardo Wurmus 958f657656
gnu: libosinfo: Use stable URL for pci.ids.
* gnu/packages/qemu.scm (libosinfo)[native-inputs]: Use a stable URL for
the pci.ids file.
2016-12-14 21:58:32 +01:00
Tobias Geerinckx-Rice 8471a8d1fe
gnu: xkeyboard-config: Update to 2.19.
* gnu/packages/xorg.scm (xkeyboard-config): Update to 2.19.
2016-12-14 20:04:23 +01:00
Marius Bakke 27fab2bf65
gnu: python-cryptography: Update to 1.7.1.
* gnu/packages/python.scm (python-cryptography, python2-cryptography): Update
  to 1.7.1.
  [arguments]: Remove field.
(python-cryptography-vectors, python2-cryptography-vectors): Update to 1.7.1.
2016-12-14 19:12:14 +01:00
Tobias Geerinckx-Rice 938f66cb86
gnu: man-pages: Update to 4.09.
* gnu/packages/man.scm (man-pages): Update to 4.09.
2016-12-14 19:09:49 +01:00
David Craven ecee21473b
gnu: Add rustc.
* gnu/packages/rust.scm (rustc): New variable.

Co-authored-by: Eric Le Bihan <eric.le.bihan.dev@free.fr>
2016-12-14 16:30:43 +01:00
David Craven 423f9e4494
gnu: Add rust bootstrap binaries.
* gnu/packages/rust.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add rust.scm.
2016-12-14 16:30:42 +01:00
David Craven 22897187c1
gnu: llvm: Enable install utils.
* gnu/packages/llvm.scm (llvm)[arguments]: Add -DLLVM_INSTALL_UTILS=ON
  to configure-flags.
2016-12-14 16:30:42 +01:00
Leo Famulari 7ab3ea4266
gnu: nss, nss-certs: Update to 3.27.2.
* gnu/packages/gnuzilla.scm (nss): Update to 3.27.2.
* gnu/packages/certs.scm (nss-certs): Update to 3.27.2.
2016-12-14 10:19:32 -05:00
Leo Famulari 5ac6b841c2
gnu: icedtea-8: Update to 3.2.0 [fixes CVE-2016-{5542,5554,5568,5573,5582,5597}].
* gnu/packages/java.scm (icedtea-8): Update to 3.2.0.
[arguments]: Pass '--disable-system-pcsc' and '--disable-system-sctp'
to #:configure-flags.
2016-12-14 10:19:32 -05:00
Leo Famulari ab129dac7d
gnu: icedtea-7: Update to 2.6.8 [fixes CVE-2016-{5542,5554,5568,5573,5582,5597}]
* gnu/packages/java.scm (icedtea-7): Update to 2.6.8.
2016-12-14 10:19:29 -05:00
Ben Woodcroft ce3f92e701
gnu: Add r-bit64.
* gnu/packages/statistics.scm (r-bit64): New variable.
2016-12-14 20:43:28 +10:00
Ben Woodcroft 42066e6b4a
gnu: Add r-bit.
* gnu/packages/statistics.scm (r-bit): New variable.
2016-12-14 20:43:28 +10:00
Mark H Weaver 5a3849443a
gnu: linux-libre: Update to 4.9.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.9.
* gnu/packages/linux-libre-4.8-x86_64.conf,
gnu/packages/linux-libre-4.8-i686.conf: Delete files.
* gnu/packages/linux-libre-4.9-x86_64.conf,
gnu/packages/linux-libre-4.9-i686.conf: New files.
* Makefile.am (KCONFIGS): Update accordingly.
2016-12-14 03:27:26 -05:00
Ludovic Courtès 4fbd0f4f86
gnu: guile-next: Update to 2.1.5.
* gnu/packages/guile.scm (guile-next): Update to 2.1.5.
[properties]: Add 'upstream-name', 'ftp-server', and 'ftp-directory'.
2016-12-14 08:48:38 +01:00
Ludovic Courtès e8a463e646
gnu: usbutils: Update to 008.
* gnu/packages/linux.scm (usbutils): Update to 008.
[inputs]: Add EUDEV.
2016-12-14 00:22:49 +01:00
Ludovic Courtès 3232613e63
gnu: wireless-regdb: Update to 2016.06.10.
* gnu/packages/linux.scm (wireless-regdb): Update to 2016.06.10.
2016-12-14 00:22:49 +01:00
Christopher Baines 4b41febf9c
services: mysql: Add port to configuration
* gnu/services/databases.scm (<mysql-configuration>): Add port field.
(mysql-configuration-file): Use the port field when creating the
configuration file.
* doc/guix.texi (Database Services): Document it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2016-12-14 00:22:49 +01:00
Marius Bakke 673c0390aa
gnu: xproto: Update to 7.0.31.
* gnu/packages/xorg.scm (xproto): Update to 7.0.31.
2016-12-13 20:48:14 +01:00
Marius Bakke 3f1b4bc316
gnu: xf86-input-keyboard: Update to 1.9.0.
* gnu/packages/xorg.scm (xf86-input-keyboard): Update to 1.9.0.
2016-12-13 20:39:01 +01:00
Marius Bakke 12f3af5f1a
gnu: xf86-video-ati: Update to 7.8.0.
* gnu/packages/xorg.scm (xf86-video-ati): Update to 7.8.0.
2016-12-13 20:37:13 +01:00
Marius Bakke 546856a3de
gnu: xf86-input-libinput: Update to 0.23.0.
* gnu/packages/xorg.scm (xf86-input-libinput): Update to 0.23.0.
2016-12-13 20:31:29 +01:00
Tobias Geerinckx-Rice d7f84eab02
gnu: iproute2: Update to 4.9.0.
* gnu/packages/linux.scm (iproute2): Update to 4.9.0.
[home-page]: Point to the latest attempt, and use HTTPS.
2016-12-13 19:32:34 +01:00
Alex Kost bee075e706
gnu: libjpeg-turbo: Fix typo.
This is a followup to commit e90a706e16.

* gnu/packages/image.scm (libjpeg-turbo): Remove extra "\".
2016-12-13 19:56:07 +03:00
Ludovic Courtès 1975ec69e7
gnu: epic5: Fix 'license' field to contain only licenses.
* gnu/packages/irc.scm (epic5)[license]: Call 'license:non-copyleft'.
2016-12-13 17:24:30 +01:00
Efraim Flashner 1d0814670c
gnu: python-pyqt: Update to 5.7.
* gnu/packages/qt.scm (python-pyqt): Update to 5.7.
2016-12-13 15:11:25 +02:00
Efraim Flashner e5a12fba82
gnu: onionshare: Update to 0.9.2 (fixes CVE-2016-5026).
* gnu/packages/tor.scm (onionshare): Update to 0.9.2.
[source]: Remove patch.
[arguments]: Update substitutions for new version.
* gnu/packages/patches/onionshare-fix-install-paths.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-12-13 13:12:31 +02:00
Ben Woodcroft 991e143d25
gnu: diamond: Update to 0.8.29.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.29.
2016-12-13 20:01:56 +10:00
Ben Woodcroft ced1c496aa
gnu: orfm: Update to 0.6.1.
* gnu/packages/bioinformatics.scm (orfm): Update to 0.6.1.
2016-12-13 20:00:50 +10:00
Efraim Flashner 310248c621
gnu: libsrtp: Fix building on mips.
* gnu/packages/telephony.scm (libsrtp)[arguments]: Add substitution
changing variable name from 'mips' to 'mips_value'. Also substitute
dictionary location in test suite.
2016-12-13 11:15:49 +02:00
Efraim Flashner 6f09178d2a
gnu: libsrtp: Have source use file-name.
* gnu/packages/telephony.scm (libsrtp)[source]: Add file-name field.
2016-12-13 11:15:48 +02:00
Efraim Flashner e90a706e16
gnu: libjpeg-turbo: Fix build on mips.
* gnu/packages/image.scm (libjpeg-turbo)[arguments]: Add substitution to
set variable type before use.
2016-12-13 11:15:32 +02:00
Marius Bakke 61dd253f8e
gnu: lftp: Update to 4.7.4.
* gnu/packages/ftp.scm (lftp): Update to 4.7.4.
[home-page]: Change to new domain.
[source]: Adjust to new domain. Add mirror.
2016-12-13 09:38:01 +01:00
Marius Bakke d660f7be6d
gnu: python-setuptools: Update to 31.0.0.
* gnu/packages/python.scm (python-setuptools, python2-setuptools): Update to
31.0.0.
[source]: Use 'pypi-uri'.
[license]: Update for bundled libraries.
2016-12-13 09:37:49 +01:00
Marius Bakke ad04bd6b2a
gnu: duplicity: Use 'modify-phases' syntax.
* gnu/packages/backup.scm (duplicity)[arguments]: Use 'modify-phases'.
2016-12-13 09:37:43 +01:00
Tobias Geerinckx-Rice 7843f276d1
gnu: xf86-video-nouveau: Update to 1.0.13.
* gnu/packages/xorg.scm (xf86-video-nouveau): Update to 1.0.13.
2016-12-13 04:59:22 +01:00
Tobias Geerinckx-Rice 80a612dccf
gnu: xf86-input-synaptics: Update to 1.9.0.
* gnu/packages/xorg.scm (xf86-input-synaptics): Update to 1.9.0.
2016-12-13 04:50:28 +01:00
Tobias Geerinckx-Rice f63491a385
gnu: xf86-input-mouse: Update to 1.9.2.
* gnu/packages/xorg.scm (xf86-input-mouse): Update to 1.9.2.
2016-12-13 04:50:28 +01:00
Tobias Geerinckx-Rice 5de2ec6deb
gnu: xf86-input-joystick: Update to 1.6.3.
* gnu/packages/xorg.scm (xf86-input-joystick): Update to 1.6.3.
2016-12-13 04:50:28 +01:00
Tobias Geerinckx-Rice 08cf3e4ce5
gnu: xf86-input-evdev: Update to 2.10.4.
* gnu/packages/xorg.scm (xf86-input-evdev): Update to 2.10.4.
2016-12-13 04:50:27 +01:00
Tobias Geerinckx-Rice 2f79bbfc01
gnu: nano: Update to 2.7.2.
* gnu/packages/nano.scm (nano): Update to 2.7.2.
2016-12-13 04:30:04 +01:00
Tobias Geerinckx-Rice c82fd97e0b
gnu: libgcrypt: Update to 1.7.4.
* gnu/packages/gnupg.scm (libgcrypt): Update to 1.7.4.
2016-12-13 03:46:58 +01:00
Tobias Geerinckx-Rice 20f7a750ed
gnu: gnutls: Update to 3.5.7.
* gnu/packages/tls.scm (gnutls): Update to 3.5.7.
2016-12-13 03:46:57 +01:00
Ludovic Courtès b810a85019
gnu: Default to GCC 5.
This reinstates and adjusts
commit e3d0fcbf7e.

* gnu/packages/patches/gcc-libiberty-printf-decl.patch: New file.
* gnu/packages/gcc.scm (gcc-5)[source]: Use it.
[patches]: Add "gcc-arm-bug-71399.patch".
(gcc): Switch to GCC-5.
* gnu/packages/commencement.scm (libstdc++-boot0): New variable.
(gcc-boot0)[inputs]: Add it.
(gcc-toolchain-4.9): Switch to GCC-4.9.
(gcc-toolchain-5): Switch to GCC-FINAL.
* gnu/local.mk (dist_patch_DATA): Add 'gcc-libiberty-printf-decl.patch'.
2016-12-13 00:40:57 +01:00
Marius Bakke 1d0ceb4775
gnu: sqlite: Update to 3.15.2.
* gnu/packages/databases.scm (sqlite): Update to 3.15.2.
2016-12-12 22:54:25 +01:00
Tobias Geerinckx-Rice 68a9d6df5e
gnu: perl-dbix-class-introspectablem2m: Update source tarball URL.
* gnu/packages/perl.scm (perl-dbix-class-introspectablem2m)[source]: Update
tarball URL.
2016-12-12 22:08:45 +01:00
Tobias Geerinckx-Rice 32fd260076
gnu: cssc: Update to 1.4.0.
* gnu/packages/version-control.scm (cssc): Update to 1.4.0.
[source]: Remove unneeded patches (i.e. all of them).
* gnu/packages/patches/cssc-gets-undeclared.patch: Delete file.
* gnu/packages/patches/cssc-missing-include.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Remove deleted patches.
2016-12-12 22:08:45 +01:00
Tobias Geerinckx-Rice bea3cf4b90
gnu: gsl: Update to 2.3.
* gnu/packages/maths.scm (gsl): Update to 2.3.
2016-12-12 22:08:45 +01:00
Tobias Geerinckx-Rice 469846a7ba
gnu: vim: Update to 8.0.0133.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0133.
2016-12-12 22:08:44 +01:00
Kei Kebreau b43ec33b6d
gnu: denemo: Change default preferences to use the already-present lilypond.
* gnu/packages/music.scm (denemo)[progpagated-inputs]: Move lilypond to ...
[inputs]: ... here.
[phases]: New phase set-lilypond.
2016-12-12 12:16:17 -05:00
Efraim Flashner 987ad88fb6
gnu: calibre: Update to 2.74.0.
* gnu/packages/ebook.scm (calibre): Update to 2.74.0.
2016-12-12 16:14:30 +02:00
Efraim Flashner 0468eddafb
gnu: python-sip: Update to 4.18.1.
* gnu/packages/qt.scm (python-sip): Update to 4.18.1.
2016-12-12 16:14:30 +02:00
Efraim Flashner f9513086c4
gnu: python-pyqt-4: Use 'modify-phases' syntax.
* gnu/packages/qt.scm (python-pyqt-4)[arguments]: Use 'modify-phases'
syntax.
2016-12-12 16:14:30 +02:00
Efraim Flashner a0bc2d45eb
gnu: python-pyqt@5.5: Remove variable.
* gnu/packages/qt.scm (python-pyqt@5.5, python2-pyqt@5.5): Remove them.
2016-12-12 16:14:29 +02:00
Efraim Flashner c5ea912016
gnu: calibre: Update qt dependancies.
* gnu/packages/ebook.scm (calibre)[native-inputs]: Remove qt, add
qtbase.
[inputs]: Remove qt, replace python2-pyqt@5.5 with python2-pyqt.
2016-12-12 16:14:29 +02:00
Efraim Flashner e9adcd81b1
gnu: python-pyqt: Build with more qt modules.
* gnu/packages/qt.scm (python-pyqt)[inputs]: Add qtbase, qtconnectivity,
qtdeclarative, qtlocation, qtmultimedia, qtsensors, qtserialport, qtsvg,
qttools, qtwebchannel, qtwebkit, qtwebsockets, qtx11extras,
qtxmlpatterns.
(python2-pyqt)[inputs]: Same.
(python-pyqt@4)[inputs]: Only use python.
2016-12-12 16:14:24 +02:00
Ben Woodcroft 2df3d147ef
gnu: orfm: Update to 0.6.0.
* gnu/packages/bioinformatics.scm (orfm): Update to 0.6.0.
2016-12-12 20:49:31 +10:00
Ludovic Courtès 92cc9cf180
gnu: guile: Update to 2.0.13.
* gnu/packages/guile.scm (guile-2.0): Update to 2.0.13.
[source](patches): New field.
[replacement]: Remove.
(guile-2.0.13): Remove.
2016-12-12 00:42:32 +01:00
Christopher Baines 23b40c6625
gnu: direnv: Update to 2.10.0.
* gnu/packages/shellutils.scm (direnv): Update to 2.10.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-11 17:58:55 -05:00
Leo Famulari 4a990395d7
Merge branch 'staging' 2016-12-11 15:03:52 -05:00
Danny Milosavljevic 0c6fc4b7e5
gnu: sunxi-tools: Update to 1.4.2.
* gnu/packages/admin.scm (sunxi-tools): Update to 1.4.2.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-12-11 14:14:31 -05:00
Marius Bakke 4eb6ed28a3
gnu: python-html5lib: Add dependency on python-webencodings.
* gnu/packages/python.scm (python-html5lib,
python2-html5lib)[propagated-inputs]: Add python-webencodings.
2016-12-11 20:09:26 +01:00
Marius Bakke adbca19e83
gnu: Add python-webencodings.
* gnu/packages/python.scm (python-webencodings, python2-webencodings): New
variables.
2016-12-11 20:09:23 +01:00
Mark H Weaver 81d6fd2457
gnu: linux-libre: Update to 4.8.14.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.14.  Remove patches.
(linux-libre-arm-generic): Remove patches.
2016-12-11 09:51:10 -05:00
Mark H Weaver 762bc71e21
gnu: linux-libre@4.4: Update to 4.4.38.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.38.
Remove patches.
2016-12-11 09:51:08 -05:00
Ricardo Wurmus 0ff55f9d77
gnu: fcgi: Disable parallel building.
* gnu/packages/web.scm (fcgi)[arguments]: Disable parallel building.
2016-12-11 15:18:36 +01:00
Tobias Geerinckx-Rice 1ce6f33b0c
gnu: Add sshoot.
* gnu/packages/vpn.scm (sshoot): New variable.
2016-12-11 11:58:41 +01:00
Tobias Geerinckx-Rice 6c2e82bcb7
gnu: Add python-argcomplete.
* gnu/packages/python.scm (python-argcomplete): New variable.
2016-12-11 11:58:40 +01:00
Tobias Geerinckx-Rice 5c863d57ff
gnu: Add sshuttle.
* gnu/packages/vpn.scm (sshuttle): New variable.
2016-12-11 11:58:40 +01:00
Christopher Baines 97bb1ab665
services: Activate system prior to services.
* gnu/services.scm (activation-script): Move 'activation-current-system'
call before (for-each primitive-load …).

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-11 09:31:34 +01:00
Leo Famulari 5ce09ef18f
gnu: openjpeg-2.1.2: Use a meaningful file-name for the source code.
This is a followup to commit 0e8b7b1c35.

* gnu/packages/image.scm (openjpeg-2.1.2)[source]: Give a meaningful
file-name.
2016-12-11 02:25:16 -05:00
Leo Famulari b245f7589e
gnu: diffoscope: Update to 63.
* gnu/packages/package-management.scm (diffoscope): Update to 63.
[arguments]: Remove obsolete 'disable-failing-test' and 'disable-egg-zipping'
phases. The former was fixed upstream, and the latter is fixed by the new Python
build system.
2016-12-11 02:04:38 -05:00
Leo Famulari 0e8b7b1c35
gnu: openjpeg: Update replacement to 2.1.2 [fixes CVE-2016-{7445,8332}].
* gnu/packages/image.scm (openjpeg/fixed): Replace variable with ...
(openjpeg-2.1.2): ... this.
[patches]: Remove patches inherited from openjpeg.
(openjpeg)[replacement]: Replace with openjpeg-2.1.2.
2016-12-11 02:04:31 -05:00
Mark H Weaver d94691e0c2
Merge branch 'master' into staging 2016-12-10 23:03:57 -05:00
Kei Kebreau edd1652e0a
gnu: Add denemo.
* gnu/packages/music.scm (denemo): New variable.
2016-12-10 19:40:01 -05:00
Tobias Geerinckx-Rice 14f4a46c98
gnu: libpsl: Update to 0.16.0.
* gnu/packages/web.scm (libpsl): Update to 0.16.0.
2016-12-11 00:50:13 +01:00
David Craven e31b75f22f
gnu: Add ocaml-menhir.
* gnu/packages/ocaml.scm (ocaml-menhir): New variable.
2016-12-10 21:47:08 +01:00
David Craven 2694d1dc80
gnu: coq: Update to 8.5pl2.
* gnu/packages/ocaml.scm (coq): Update to 8.5pl2.
  [arguments]: Configure script takes single hyphen arguments.
2016-12-10 21:47:08 +01:00
David Craven 60bc622b1d
gnu: idris: Update to 0.12.3.
* gnu/packages/haskell.scm (idris): Update to 0.12.3.
  [origin]: Remove snippet.
  [inputs]: Add ghc-aeson, ghc-async, ghc-fsnotify, ghc-regex-tdfa,
  ghc-tasty-golden, ghc-tasty-rerun and ghc-terminal-size.
  [arguments]: Disable tests.
2016-12-10 21:47:08 +01:00
David Craven 3ea25176f0
gnu: ghc-trifecta: Update to 1.6.
* gnu/packages/haskell.scm (ghc-trifecta): Update to 1.6.
  [inputs]: Add ghc-doctest and ghc-quickcheck.
  [arguments]: Enable tests.
2016-12-10 21:47:08 +01:00
David Craven 4e05c326ef
gnu: Add ghc-terminal-size.
* gnu/packages/haskell.scm (ghc-terminal-size): New variable.
2016-12-10 21:47:08 +01:00
David Craven 5e6cafe157
gnu: Add ghc-ieee754.
* gnu/packages/haskell.scm (ghc-ieee754): New variable.
2016-12-10 21:47:07 +01:00
David Craven f7e624b639
gnu: Add ghc-tasty-rerun.
* gnu/packages/haskell.scm (ghc-tasty-rerun): New variable.
2016-12-10 21:47:07 +01:00
David Craven b7f96285a5
gnu: Add ghc-fsnotify.
* gnu/packages/haskell.scm (ghc-fsnotify): New variable.
2016-12-10 21:47:07 +01:00
David Craven f63981de14
gnu: Add ghc-hinotify.
* gnu/packages/haskell.scm (ghc-hinotify): New variable.
2016-12-10 21:47:07 +01:00
Mark H Weaver 56c394ee43
gnu: icecat: Add more fixes from upstream mozilla-esr45.
* gnu/packages/gnuzilla.scm (icecat)[sources]: Add more fixes from the
upstream mozilla-esr45 repository.
2016-12-10 15:22:38 -05:00
Efraim Flashner 78636f0b8c
gnu: grep: Update to 2.27.
* gnu/packages/base.scm (grep): Update to 2.27.
2016-12-10 22:10:30 +02:00
Efraim Flashner 67c539e21f
gnu: Remove unused patch.
* gnu/packages/patches/openjpeg-CVE-2015-6581.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-12-10 21:59:56 +02:00
Efraim Flashner a304b6c362
gnu: openjpeg: Add fixes for CVE-2016-{9850,9851}.
* gnu/packages/image.scm (openjpeg)[replacement]: New field.
(openjpeg/fixed): New variable, patch against CVE-2016-9850,
CVE-2016-9851.
* gnu/packages/patches/openjpeg-CVE-2016-9850-CVE-2016-9851.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2016-12-10 21:46:45 +02:00
Efraim Flashner 70c1d5ed05
gnu: ffmpeg@2.8: Update to 2.8.9.
* gnu/packages/video.scm (ffmpeg@2.8): Update to 2.8.9.
2016-12-10 21:00:23 +02:00
Efraim Flashner a6cd85742d
gnu: jasper: Update to 2.0.6.
* gnu/packages/image.scm (jasper): Update to 2.0.6.
2016-12-10 20:59:19 +02:00
Christopher Baines a77f036084
gnu: password-store: Don't run tests in parallel.
* gnu/packages/password-utils.scm (password-store): Don't run tests in
  parallel, as it causes them to hang and the build to timeout.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-10 14:07:32 +01:00
Christopher Baines 619f98fa8f
gnu: password-store: Delete build phase
* gnu/packages/password-utils.scm (password-store): Remove the build
  phase, as it is unused.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-10 14:04:18 +01:00
Marius Bakke fc184fe2de
gnu: openssl-next: Update to 1.1.0c [fixes CVE-{7053,7054,7055}].
* gnu/packages/tls.scm (openssl-next): Update to 1.1.0c.
[arguments]: Duplicate 'configure' to add rpath flag previously handled by
now-defunct 'patch-runpath' phase. Duplicate 'remove-miscellany' phase.
2016-12-10 14:00:05 +01:00
Kei Kebreau fdb552bbd4
gnu: windowmaker: Fix invocation of 'wmsetbg'.
* gnu/packages/gnustep.scm (windowmaker)[arguments]: Add substitution of
40-character limit with a 107-character limit.
2016-12-09 22:10:06 -05:00
Ben Woodcroft a225db5293
gnu: vsearch: Update to 2.3.4.
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.3.4.
2016-12-10 10:45:13 +10:00
Ben Woodcroft 7922ab8fe8
gnu: pardre: Update to 1.1.5-1.
* gnu/packages/bioinformatics.scm (pardre): update to 1.1.5-1.
[source]: Update source hash.
2016-12-10 10:45:12 +10:00
Mark H Weaver 6b2921c3ac
gnu: linux-libre: Add fixes for CVE-2016-8655 et al.
* gnu/packages/linux.scm (linux-libre, linux-libre-arm-generic):
Add patches for CVE-2016-8655 and the vulnerability described in
<http://seclists.org/oss-sec/2016/q4/644>.
2016-12-09 18:36:21 -05:00
Mark H Weaver 1134e99d86
gnu: linux-libre@4.4: Add fixes for CVE-2016-8655 et al.
* gnu/packages/linux.scm (linux-libre-4.4): Add patches for CVE-2016-8655 and
the vulnerability described in <http://seclists.org/oss-sec/2016/q4/644>.
2016-12-09 18:36:03 -05:00
Ludovic Courtès 72c0b68780
gnu: libsoup: Update to 2.56.0.
* gnu/packages/gnome.scm (libsoup): Update to 2.56.0.
2016-12-10 00:10:30 +01:00
Ben Woodcroft fdf3a68d9e
gnu: ruby-sdoc: Update to 0.4.2.
* gnu/packages/ruby.scm (ruby-sdoc): Update to 0.4.2.
[arguments]: Remove 'relax-minitest-requirement' phase, Add 'set-rubylib'
phase.
[native-inputs]: Add ruby-hoe.
2016-12-10 07:51:47 +10:00
Ben Woodcroft 71596c3ce6
gnu: Adjust gemspec modifications for ruby-2.3.2.
* gnu/packages/ruby.scm (ruby-mocha)[arguments]: Adjust 'substitute*' of
gemspec.
(ruby-domain-name)[arguments]: Likewise.
2016-12-10 07:50:16 +10:00
Mark H Weaver 750778abd4
gnu: linux-libre: Update to 4.8.13.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.13.
2016-12-09 15:13:22 -05:00
Mark H Weaver 33d6a2ff9f
gnu: linux-libre@4.4: Update to 4.4.37.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.37.
2016-12-09 15:10:17 -05:00
Paul Garlick f81c6a4932
gnu: gmsh: Update to 2.15.0.
* gnu/packages/maths.scm (gmsh): Update to 2.15.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-09 19:14:21 +01:00
Marius Bakke dfdc92259b
gnu: libev: Update to 4.23.
* gnu/packages/libevent.scm (libev): Update to 4.23.
2016-12-09 18:23:05 +01:00
Ludovic Courtès f80b4d2ce0
Merge remote-tracking branch 'origin/master' into staging 2016-12-09 18:11:14 +01:00
Ludovic Courtès 13b5f44b47
gnu: libepoxy: Add patch to avoid segfault when GL support is missing.
* gnu/packages/patches/libepoxy-gl-null-checks.patch: New file.
* gnu/packages/gl.scm (libepoxy)[source]: Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-12-09 18:09:43 +01:00
Ludovic Courtès d99ee3d923
gnu: ruby-sdoc: Really relax minitest version requirement.
* gnu/packages/ruby.scm (ruby-sdoc)[arguments]: Adjust pattern in
'relax-minitest-requirement'.
2016-12-09 15:39:13 +01:00
Hartmut Goebel 43e8824d3c
gnu: python-pyqt: Fix build by explicitly setting the stubsdir.
* gnu/packages.qt.scm (python-pyqt, python2-pyqt)[arguments]: In phase
'configure' pass option --stubsdir.
2016-12-09 13:04:17 +01:00
Hartmut Goebel 931eaeaad9
gnu: python-pyqt-5.5: Use non-inherited "configure" phase.
This allows passing different options for 5.5 than for the main version
(which is currently 5.6).

* gnu/packages.qt.scm (python-pyqt-5.5, python2-pyqt-5.5)[arguments]: Copy
from (python-pyqt)[arguments].
2016-12-09 13:04:17 +01:00
Hartmut Goebel 9fde877856
gnu: python2-pyqt-4: Change package name to python2-pyqt.
* gnu/packages/qt.scm (python2-pyqt-4)[package]: Change "name"
python2-pyqt.
2016-12-09 13:04:17 +01:00
Danny Milosavljevic 444a79b6fe
gnu: Add python-flask-restful-swagger.
* gnu/packages/python.scm (python-flask-restful-swagger,
  python2-flask-restful-swagger): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-09 11:57:10 +01:00
Marius Bakke fe3b8862cf
gnu: alot: Update to 0.4.
* gnu/packages/mail.scm (alot): Update to 0.4.
[arguments]: Update python3 comment.
2016-12-09 11:47:39 +01:00
Julien Lepiller b1a3c533f3
gnu: php: Update to 7.0.14.
* gnu/packages/php.scm (php): Update to 7.0.14.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-09 09:58:36 +01:00
Leo Famulari e11fb2b862
gnu: parallel: Update 20161122.
* gnu/packages/parallel.scm (parallel): Update to 20161122.
2016-12-08 23:12:51 -05:00
rennes 1f6a73ee6b
gnu: Add gnome-system-monitor.
* gnu/packages/gnome.scm (gnome-system-monitor): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-08 23:42:12 +01:00
ng0 0c69a17efd
gnu: Add epic5.
* gnu/packages/irc.scm (epic5): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2016-12-08 22:36:15 +02:00
Efraim Flashner c32f0e3059
gnu: enlightenment: Update to 0.21.4.
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.21.4.
2016-12-08 21:45:37 +02:00
Efraim Flashner 80a92a0fb5
gnu: efl: Update to 1.18.4.
* gnu/packages/enlightenment.scm (efl): Update to 1.18.4.
2016-12-08 21:45:37 +02:00
Efraim Flashner 256470325b
gnu: tor: Update to 0.2.8.11.
* gnu/packages/tor.scm (tor): Update to 0.2.8.11.
2016-12-08 21:45:33 +02:00
Leo Famulari cb5a32c022
gnu: imagemagick: Update to 6.9.6-7.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.6-7.
2016-12-08 14:32:02 -05:00
Leo Famulari 57513498de
gnu: tcsh: Fix out of bounds read.
* gnu/packages/patches/tcsh-fix-out-of-bounds-read.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/shells.scm (tcsh)[replacement]: New field.
(tcsh/fixed): New variable.
2016-12-08 13:53:36 -05:00
José Miguel Sánchez García a2c1dceadd
gnu: Add vis.
* gnu/packages/text-editors.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2016-12-08 15:07:34 +01:00
Marius Bakke a14061aae6
gnu: python-html5lib: Update to 1.0b10 [fixes CVE-2016-{9909,9910}].
* gnu/packages/python.scm (python-html5lib, python2-html5lib): Update to 1.0b10.
2016-12-08 13:55:46 +01:00
Ben Woodcroft 1b7f17ef90
gnu: vsearch: Update to 2.3.3.
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.3.3.
2016-12-08 22:39:10 +10:00
Alex Kost cb72d34348
gnu: libreoffice: Add 'libreoffice' symlink.
* gnu/packages/libreoffice.scm (libreoffice)[arguments]: Adjust
'bin-install' phase to make 'libreoffice' symlink along with 'soffice'.

Co-authored-by: ng0 <ng0@libertad.pw>
2016-12-08 12:32:52 +03:00
Alex Kost a9c61335c9
gnu: Update 'geiser' hash and deprecate 'geiser-next'.
* gnu/packages/emacs.scm (geiser)[source]: Update the hash (the release
tarball was updated in place).
(geiser-next): Deprecate.
2016-12-08 12:32:52 +03:00
John Darrington 7b706a4930
gnu: Fix path to /etc/netconfig in libtirpc.
* gnu/packages/onc-rpc.scm (libtirpc) [arguments]: Replace "/etc/netconfig"
with (string-append %output "/etc/netconfig")
2016-12-08 08:30:57 +01:00
Adonay Felipe Nogueira c451474488
gnu: samba: Don't expect configuration files inside the store.
Fixes <http://bugs.gnu.org/24834>.

* gnu/packages/samba.scm (samba)[arguments]: Add --sysconfdir configure flag.
Add 'disable-etc-samba-directory-creation' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-08 00:28:47 +01:00
José Miguel Sánchez García 35cdc267ae
gnu: Add lua-lpeg.
* gnu/packages/lua.scm (lua-lpeg): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-07 23:20:24 +01:00
José Miguel Sánchez García db913ac431
gnu: Add libtermkey.
* gnu/packages/terminals.scm (libtermkey): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-07 23:09:49 +01:00
Ludovic Courtès 3593e5d5c5
gnu: cross-base: Move phases to (gnu build cross-toolchain).
* gnu/packages/cross-base.scm (cross-gcc-arguments) <#:phases>: Use
'cross-gcc-build-phases', and move body cross-toolchain.scm.
(cross-gcc): Add #:imported-modules.  Add (gnu build cross-toolchain) to
 #:modules.
* gnu/build/cross-toolchain.scm: New file, with code from
'cross-gcc-arguments'.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-12-07 21:52:26 +01:00
Ludovic Courtès 3009a9e451
gnu: cross-base: Factorize list of cross environment variables.
* gnu/packages/cross-base.scm (cross-libc): Replace literal list of
environment variable names with %GCC-CROSS-INCLUDE-PATHS.
(cross-kernel-headers): Likewise.
2016-12-07 21:52:26 +01:00
Efraim Flashner 8a3ce2c7b0
gnu: ams-lv2: Remove CPU optimization flags on non-Intel hardware.
* gnu/packages/music.scm (ams-lv2)[arguments]: Add phase to remove
Intel specific CPU optimization flags when compiling on non-Intel
hardware.
2016-12-07 21:38:43 +02:00
Danny Milosavljevic bb4b17064d
gnu: python-sqlalchemy-utils: Update to 0.32.11.
* gnu/packages/python.scm (python-sqlalchemy-utils): Update to 0.32.11.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-07 18:51:46 +01:00
Danny Milosavljevic 1ed21519f7
gnu: Add python-sadisplay.
* gnu/packages/python.scm (python-sadisplay, python2-sadisplay): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-07 14:20:46 +01:00
Efraim Flashner 491f291892
gnu: subversion: Update to 1.8.17.
* gnu/packages/version-control.scm (subversion): Update to 1.8.17.
2016-12-07 13:15:06 +02:00
Manolis Ragkousis f13f60cb26
gnu: make-bootstrap: Produce the correct %glibc-bootstrap-tarball for Hurd systems.
* gnu/packages/make-bootstrap.scm (%glibc-bootstrap-tarball): Make it a procedure.
  (%glibc-stripped): Make it a procedure and move the kernel specific part from
  here to ...
* guix/build/make-bootstrap.scm (make-stripped-libc): ... here. New file.
* Makefile.am (MODULES): Add it.
2016-12-07 12:59:02 +02:00
Manolis Ragkousis 1ecb7be8b7
gnu: cross-kernel-headers: Remove propagated-inputs from xhurd-headers.
* gnu/packages/cross-base.scm (xhurd-headers)[propagated-inputs]: Remove them.
2016-12-07 12:56:02 +02:00
Jan Nieuwenhuizen 88da729ff7
gnu: guile-2.0: support mingw.
* gnu/packages/guile.scm (guile-2.0): Support MinGW.
2016-12-07 10:23:17 +01:00
Jan Nieuwenhuizen ae12d58627
gnu: readline: support mingw.
* gnu/packages/patches/readline-7.0-mingw.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/readline.scm (readline): Support MinGW.
2016-12-07 10:23:17 +01:00
Mark H Weaver d230cf61f6
gnu: ncurses: support mingw.
* gnu/packages/ncurses.scm (ncurses): Support MinGW.

Co-Authored-By: Jan Nieuwenhuizen <janneke@gnu.org>
2016-12-07 10:23:17 +01:00
Jan Nieuwenhuizen 7f1c32f0e6
gnu: gmp: build shared library for mingw.
* gnu/packages/multiprecision.scm (gmp)[MINGW]: Use --enable-shared.
2016-12-07 10:23:17 +01:00
Jan Nieuwenhuizen d788fcd3ba
gnu: libunistring: support mingw: propagate libiconv if needed.
* gnu/packages/libunistring (libunistring): propagated-inputs: add
libiconv-if-needed.  Fixes unicode translation in MinGW.
2016-12-07 10:23:17 +01:00
Jan Nieuwenhuizen 4dab8c5906
gnu: Add function libiconv-if-needed.
* gnu/packages/base.scm (libiconv-if-needed): New function.
2016-12-07 10:23:16 +01:00
Jan Nieuwenhuizen cba36e6482
gnu: cross-base: Add i686-w64-mingw32 target.
* guix/utils.scm (mingw-target?): New function.
* gnu/packages/cross-base.scm (cross-gcc-snippet): New procedure
(cross-gcc): Use it.
(cross-gcc-arguments, cross-gcc-patches, cross-gcc): Support MinGW.
(native-libc, cross-newlib?): New functions.
(cross-libc): Use cross-newlib? to support MinGW.
(%gcc-include-paths, %gcc-cross-include-paths): New variables.
2016-12-07 10:23:16 +01:00
Jan Nieuwenhuizen cf0ef075c4
gnu: Add mingw-w64.
* gnu/packages/patches/gcc-4.9.3-mingw-gthr-default.patch,
gnu/packages/patches/mingw-w64-5.0rc2-gcc-4.9.3.patch,
gnu/packages/mingw.scm: New files.
* gnu/local.mk (dist_patch_DATA): Add the patches.
(GNU_SYSTEM_MODULES): Add mingw.scm.
2016-12-07 10:23:16 +01:00
Ricardo Wurmus 4908ae4847
gnu: zynaddsubfx: Update to 3.0.1.
* gnu/packages/music.scm (zynaddsubfx): Update to 3.0.1.
2016-12-07 10:13:04 +01:00
Efraim Flashner 4ff71cac67
gnu: libx264: Update to 20161205-2245.
* gnu/packages/video.scm (libx264): Update to 20161205-2245.
[source]: Use https.
[home-page]: Same.
2016-12-07 07:33:23 +02:00
Leo Famulari 425fabfc9a
gnu: radicale: Skip the test suite.
* gnu/packages/dav.scm (radicale)[arguments]: Skip the tests.
2016-12-06 20:46:18 -05:00
Efraim Flashner 37479058a1
gnu: ffmpeg: Update to 3.2.2.
* gnu/packages/video.scm (ffmpeg): Update to 3.2.2.
2016-12-06 20:48:56 +02:00
Ricardo Wurmus 61c71171a2
gnu: emacs-expand-region: Update to 0.11.0.
* gnu/packages/emacs.scm (emacs-expand-region): Update to 0.11.0.
2016-12-06 16:14:53 +01:00
Efraim Flashner 1ebe49f192
gnu: httpd: Add fix for CVE-2016-8740.
* gnu/packages/web.scm (httpd)[source]: Add patch for CVE-2016-8740.
* gnu/packages/patches/httpd-CVE-2016-8740.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2016-12-06 15:39:25 +02:00
Hartmut Goebel 3a735ecf0e
gnu: python2-notebook: Fix build.
* gnu/packages/python.scm (python2-notebook)[properties]: Add
python2-variant.
(python2-notebook)[native-packages] add python2-mock. [arguments] Add
phase "disable-test-case" for disabling a failing test. immediately
2016-12-06 11:30:15 +01:00
Hartmut Goebel c4abbac349
gnu: python-ipython-genutils: Update description.
* gnu/packages/python.scm (python-ipython-genutils)[description]: Add
deprecation note and TODO comment.
2016-12-06 11:29:37 +01:00
Hartmut Goebel 4dbc8ec483
gnu: python-ipython: Update to 4.0.3
* gnu/packages/python.scm (python-ipython, python2-ipython): Update to
version 4.0.3.
2016-12-06 11:29:35 +01:00
Ricardo Wurmus 5a66e25ce6
gnu: Add seq24.
* gnu/packages/music.scm (seq24): New variable.
* gnu/packages/patches/seq24-rename-mutex.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patch.
2016-12-06 10:15:49 +01:00
Efraim Flashner 24420005ec
gnu: links: Update to 2.14.
* gnu/packages/links.scm (links): Update to 2.14.
2016-12-06 10:11:27 +02:00
Jan Nieuwenhuizen 590abe010b
gnu: Add openh264.
* gnu/packages/video.scm (openh264): New variable.
2016-12-06 10:11:18 +02:00
Ludovic Courtès 40f2d1bc3b
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 8d125c.
2016-12-06 01:24:06 +01:00
Ludovic Courtès 8243951ef1
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to e11c42f.
2016-12-06 00:24:24 +01:00
Leo Famulari 4bd391f557
gnu: i3-wm: Update to 4.13.
* gnu/packages/wm.scm (i3-wm): Update to 4.13.
[arguments]: Pass '-std=c11' to #:make-flags. Provide path to XML_CATALOG_FILES.
Pass '--disable-builddir' to #:configure-flags. Re-enable the 'configure' phase
to adjust to new Autotools build system.
[inputs]: Add xcb-util-xrm.
[native-inputs]: Add docbook-xsl.
2016-12-05 17:09:15 -05:00
Leo Famulari 81f4f1051f
gnu: xcb-util-cursor: Propagate dependencies from 'xcb-cursor.pc'.
* gnu/packages/xorg.scm (xcb-util-cursor)[inputs]: Move xcb-util-renderutil and
xcb-util-image to ...
[propagated-inputs]: ... here.
2016-12-05 17:09:15 -05:00
Leo Famulari 6e02766d43
gnu: ruby-2.2, ruby-2.1, ruby-1.8: Don't replace with ruby-2.3.3.
* gnu/packages/ruby.scm (ruby-2.2, ruby-2.1, ruby-1.8)[replacement]: New field.
2016-12-05 16:41:23 -05:00
Ludovic Courtès 3a6a563228
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 9328eaf.
2016-12-05 21:09:02 +01:00
Ludovic Courtès 9328eafbf5
services: file-system: Make sure fsck.* commands are in $PATH.
Fixes a regression introduced in
bf7ef1bb84, whereby the fsck.* commands
would not be found.

* gnu/services/base.scm (file-system-shepherd-service): Call calls to
'setenv'.
2016-12-05 20:54:59 +01:00
Tobias Geerinckx-Rice c0cc805e3f
gnu: fuse-exfat: Update to 1.2.5.
* gnu/packages/linux.scm (fuse-exfat): Update to 1.2.5.
[native-inputs]: Remove scons build system which is no longer used.
[arguments]: Remove.
[home-page]: Replace dead Google Code home page.
2016-12-05 20:33:31 +01:00
Tobias Geerinckx-Rice 694f485b47
gnu: exfat-utils: Update to 1.2.5.
* gnu/packages/mtools.scm (exfat-utils): Update to 1.2.5.
2016-12-05 20:33:31 +01:00
Tobias Geerinckx-Rice 8975d00cd6
gnu: Add mktorrent.
* gnu/packages/bittorrent.scm (mktorrent): New variable.
2016-12-05 20:33:30 +01:00
Leo Famulari 8f35c03061
gnu: python-flask: Propagate python-click.
* gnu/packages/python.scm (python-flask, python2-flask)[native-inputs]: Move
python-click to ...
[propagated-inputs]: ... here.
2016-12-04 19:27:47 -05:00
Ludovic Courtès 95088559a9
gnu: shepherd: Update to 0.3.2.
* gnu/packages/admin.scm (shepherd): Update to 0.3.2.
[properties]: New field.
2016-12-04 22:32:47 +01:00
Ludovic Courtès ba9f0db08c
services: tor: Make sure /var/lib is world-readable.
* gnu/services/networking.scm (tor-hidden-service-activation): Add
'chmod' call for /var/lib.
2016-12-04 22:32:25 +01:00
Marius Bakke 222222be63
gnu: vim: Update to 8.0.0124.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0124.
2016-12-04 22:25:30 +01:00
Tobias Geerinckx-Rice c8608faf14
gnu: dovecot: Update to 2.2.27.
* gnu/packages/mail.scm (dovecot): Update to 2.2.27.
[source, home-page]: Use HTTPS.
2016-12-04 22:15:02 +01:00
Tobias Geerinckx-Rice 9865a15057
gnu: vim: Update to 8.0.0118.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0118.
2016-12-04 22:15:02 +01:00
Ricardo Wurmus b3410b44b2
gnu: Add qmidiarp.
* gnu/packages/music.scm (qmidiarp): New variable.
2016-12-04 20:52:51 +01:00
Christopher Andersson 4cf9f57b0e
gnu: Add Swedish Aspell dictionary.
* gnu/packages/aspell.scm (aspell-dict-sv): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-12-04 19:05:06 +01:00
Marius Bakke 76bbce6af2
gnu: mupdf: Update to 1.10a.
* gnu/packages/patches/mupdf-CVE-2016-6265.patch: Delete file.
* gnu/packages/patches/mupdf-CVE-2016-6525.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7504.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7505.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7506.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7563.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7564.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-8674.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-9017.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-9136.patch: Likewise.
* gnu/packages/patches/mupdf-build-with-openjpeg-2.1.patch: Adjust to 1.10a.
* gnu/local.mk (dist_patch_DATA): Remove deleted patches.
* gnu/packages/pdf.scm (mupdf): Update to 1.10a.
[source]: Remove patches.
2016-12-04 17:41:54 +01:00
Marius Bakke a351fc8369
Merge branch 'master' into staging 2016-12-04 17:41:36 +01:00
Alex Kost d1a5b20081
gnu: Move image viewers to (gnu packages image-viewers).
* gnu/packages/feh.scm (feh): Remove file.  Move package to...
* gnu/packages/geeqie.scm (geeqie): Likewise...
* gnu/packages/sxiv.scm (sxiv): Likewise...
* gnu/packages/image-viewers.scm: ... here.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove files.
2016-12-04 17:42:05 +03:00
Alex Kost 023f0fb06e
gnu: exiv2: Move to (gnu packages image).
* gnu/packages/geeqie.scm (exiv2): Move to...
* gnu/packages/image.scm: ... here.
* gnu/packages/gnome.scm: Adjust the used modules.
* gnu/packages/gnunet.scm: Likewise.
* gnu/packages/gps.scm: Likewise.
2016-12-04 17:39:48 +03:00
Alex Kost c3a10d30d1
gnu: emms: Update to 4.2.
* gnu/packages/emacs.scm (emms): Update to 4.2.
[arguments]: EMMS installs "emms-print-metadata" now but assumes that
BINDIR exists, so do not install it manually in 'post-install' phase,
and make "/bin" directory in 'pre-install' phase.
2016-12-04 17:39:48 +03:00
Alex Kost c44ec4a8b4
gnu: emacs-with-editor: Update to 2.5.6.
* gnu/packages/emacs.scm (emacs-with-editor): Update to 2.5.6.
2016-12-04 17:39:48 +03:00
Alex Kost 4e0d9fce5a
gnu: emacs-hl-todo: Update to 1.7.4.
* gnu/packages/emacs.scm (emacs-hl-todo): Update to 1.7.4.
2016-12-04 17:39:47 +03:00
Ricardo Wurmus 951581a2d6
gnu: Add ingen.
* gnu/packages/music.scm (ingen): New variable.
2016-12-04 11:24:24 +01:00
Ricardo Wurmus f91d0d08dd
gnu: Add raul-devel.
* gnu/packages/audio.scm (raul-devel): New variable.
2016-12-04 11:17:46 +01:00
Ricardo Wurmus a9276c12ba
gnu: Add ganv-devel.
* gnu/packages/gtk.scm (ganv-devel): New variable.
2016-12-04 11:17:45 +01:00
Ricardo Wurmus 849c3d03f0
gnu: Add ams-lv2.
* gnu/packages/music.scm (ams-lv2): New variable.
2016-12-04 10:16:37 +01:00
Ricardo Wurmus 85f4863f3b
gnu: lvtk: Build UI library.
* gnu/packages/audio.scm (lvtk)[inputs]: Add gtkmm-2.
[arguments]: Pass "-std=c++11" flag.
2016-12-04 10:16:37 +01:00
Efraim Flashner 8a610eb605
gnu: Fix header in (gnu packages golang).
* gnu/packages/golang.scm: Replace header line declaring this file as
part of GNU Guix.
2016-12-04 08:50:30 +02:00
Efraim Flashner 8c15851717
gnu: Add econnman.
* gnu/packages/connman.scm (econnman): New variable.
2016-12-04 08:39:49 +02:00
Efraim Flashner 22fda787f6
gnu: Add lekha.
* gnu/packages/enlightenment.scm (lekha): New variable.
2016-12-04 08:39:49 +02:00
Efraim Flashner cf3504c69c
gnu: Add qsyncthingtray.
* gnu/packages/sync.scm (qsyncthingtray): New variable.
2016-12-04 08:39:48 +02:00
Efraim Flashner 760d6066f7
gnu: Rename owncloud.scm to sync.scm.
* gnu/packages/owncloud.scm: Rename to ...
* gnu/packages/sync.scm: ... this.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register it.
2016-12-04 08:39:48 +02:00
Efraim Flashner 7526edb9d5
gnu: Add rkflashtool.
* gnu/packages/flashing-tools.scm (rkflashtool): New variable.
2016-12-04 08:39:48 +02:00
Efraim Flashner c7ad32d94a
gnu: uget: Add missing input.
* gnu/packages/bittorrent.scm (uget)[native-inputs]: Add intltool.
2016-12-04 08:39:48 +02:00
Efraim Flashner 12ed023fb7
gnu: tor: Update to 0.2.8.10.
* gnu/packages/tor.scm (tor): Update to 0.2.8.10.
2016-12-04 08:39:48 +02:00
Leo Famulari 4b569a4ff5
gnu: acme-client: Update to 0.1.15.
* gnu/packages/tls.scm (acme-client): Update to 0.1.15.
[native-inputs]: Add pkg-config.
2016-12-03 23:28:22 -05:00
Leo Famulari b172196976
gnu: taglib: Update to 1.10.
* gnu/packages/mp3.scm (taglib): Update to 1.10.
2016-12-03 20:52:00 -05:00
Ben Woodcroft e990c81d38
gnu: aragorn: Update to 1.2.38.
* gnu/packages/bioinformatics.scm (aragorn): Update to 1.2.38.
2016-12-04 10:51:54 +10:00
Ricardo Wurmus 57b94e9d8d
gnu: Add highlight.
* gnu/packages/pretty-print.scm (highlight): New variable.
2016-12-03 23:26:16 +01:00
Ricardo Wurmus 3bec8a016f
gnu: git: Fix gitweb.
* gnu/packages/version-control.scm (git)[inputs]: Add perl-cgi.
[arguments]: Wrap "gitweb.cgi" with PERL5LIB.
2016-12-03 20:11:37 +01:00
Thomas Danckaert aa8c0ada2e
gnu: Add grantlee.
* gnu/packages/qt.scm (grantlee): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-03 18:55:01 +01:00
Thomas Danckaert f447dbc796
gnu: Add libksysguard.
* gnu/packages/kde.scm (libksysguard): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-12-03 18:55:01 +01:00
Efraim Flashner d54c0bfde4
gnu: libunistring: Update to 0.9.7.
* gnu/packages/libunistring.scm (libunistring): Update to 0.9.7.
[home-page]: Use https.
[license]: License has changed to dual lgpl3+ gpl2.
2016-12-03 19:35:27 +02:00
Mark H Weaver 5bdec7d634
gnu: icecat: Update to 45.5.1-gnu1.
* gnu/packages/gnuzilla.scm (icecat): Update to 45.5.1-gnu1.
[source]: Remove temporary URI for 45.3 beta.  Fix URI computation.  Remove
outdated patches.  Add more cherry-picked bug fixes from upstream
mozilla-esr45.  Use 'list' instead of quasiquote in 'patches' field.
2016-12-03 12:29:53 -05:00
John Darrington 8e3f813f22
gnu: Add Kerberos client service.
* doc/guix.texi (Kerberos Services)[Krb5 Service]: New subsubheading.
* gnu/services/kerberos.scm (krb5-service-type): New variable.
* gnu/services/configuration.scm (configuration-field-serializer,
  configuration-field-getter): Export variables.
2016-12-03 18:00:32 +01:00
Ricardo Wurmus 9bad404355
gnu: Add fcgiwrap.
* gnu/packages/web.scm (fcgiwrap): New variable.
2016-12-03 17:06:51 +01:00
Ricardo Wurmus ab519cfa3d
gnu: Add fcgi.
* gnu/packages/patches/fcgi-2.4.0-gcc44-fixes.patch: New file.
* gnu/packages/patches/fcgi-2.4.0-poll.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patches.
* gnu/packages/web.scm (fcgi): New variable.
2016-12-03 17:06:47 +01:00
Efraim Flashner bec5022ffe
gnu: coreutils: Update to 8.26.
* gnu/packages/base.scm (coreutils): Update to 8.26.
2016-12-03 17:30:33 +02:00
Mark H Weaver e9913f8271
gnu: linux-libre: Update to 4.8.12.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.12.
2016-12-03 10:20:59 -05:00
Mark H Weaver bc6d461249
gnu: linux-libre@4.4: Update to 4.4.36.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.36.
2016-12-03 10:20:00 -05:00
Mark H Weaver 80a359f293
gnu: linux-libre@4.1: Update to 4.1.36.
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.36.
2016-12-03 10:19:08 -05:00
Ludovic Courtès 020434d497
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 463fb7d.
2016-12-03 12:05:32 +01:00
Leo Famulari a6c4790567
gnu: python-cryptography: Update to 1.6.
* gnu/packages/python.scm (python-cryptography, python2-cryptography): Update
to 1.6.
(python-cryptography-vectors, python2-cryptography-vectors): Update to 1.6.
2016-12-03 02:39:09 -05:00
David Craven 83dcfa72d4
gnu: flex: Update to 2.6.2.
* gnu/packages/flex.scm (flex): Update to 2.6.2.
  [native-inputs]: Add help2man.
  [origin]: Update uri to github. Remove CVE-2016-6354 patch.
  (flex-2.6.1): Remove variable.
* gnu/packages/patches/flex-CVE-2016-6354.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Update.
* gnu/packages/kde-frameworks.scm (solid, kservice)[native-inputs]: Use
  flex.
2016-12-02 21:28:05 +01:00
Leo Famulari 80b63e670e
gnu: tzdata: Update to 2016j.
* gnu/packages/base.scm (tzdata): Update to 2016j.
[source]: Use HTTPS URL.
[home-page]: Use HTTPS URL.
2016-12-02 13:16:35 -05:00
Hartmut Goebel 447b9473cb
gnu: dblatex: Update comment.
* gnu/packages/docbook.scm (dblatex)[arguments]: Detail comment about why
the use of setuptools needs to be disabled.
2016-12-02 18:07:36 +01:00
Hartmut Goebel b0aa6ede25
gnu: python-numpy: Fix inputs.
This fixes 2efabc5589, where some inputs
have been changed to propagated-inputs, but the propagated-inputs are
still extended from inputs and the inputs are not extended at all.

* gnu/packages/python.scm (python-numpy, python2-numpy)[inputs]:
Extend from python-numpy-bootstrap's package-inputs. [propagated-inputs]:
Extend from python-numpy-bootstrap's package-propagated-inputs.
2016-12-02 18:07:36 +01:00
Hartmut Goebel 77a6932adf
gnu: python2-ipython: Fix inputs.
This fixes e62600feb6, where the inputs
have been changed to native-inputs, but still extended from inputs.

* gnu/packages/python.scm (python2-ipython)[native-inputs]: Extend
from python-ipython's package-native-inputs.
2016-12-02 18:07:36 +01:00
Hartmut Goebel fe4a8da445
gnu: python-numpydoc: Correct inputs.
This does what 213d1745c6 was
supposed to do.

* gnu/packages/python.scm (python-numpydoc, python-numpydoc)
Change first of the duplicate [native-inputs] definitions to
[propagated-inputs].
2016-12-02 18:07:36 +01:00
Hartmut Goebel e89aceab63
gnu: calibre: Do not use python setuptools for building.
* gnu/packages/ebook.scm (calibre)[arguments]: Set #:use-setuptools?
to false.
2016-12-02 18:07:36 +01:00
John Darrington bf7ef1bb84
gnu: file-system-shepherd-service: Use mount-file-system.
* gnu/services/base.scm (file-system-shepherd-service): Use
  mount-file-system instead of manually mounting the file system.
2016-12-02 17:43:30 +01:00
Marius Bakke d24727c019
gnu: Add dnscrypt-proxy.
* gnu/packages/dns.scm (dnscrypt-proxy): New variable.
2016-12-02 16:58:58 +01:00
Marius Bakke afe62a8bfb
gnu: Add dnscrypt-wrapper.
* gnu/packages/dns.scm (dnscrypt-wrapper): New variable.
2016-12-02 16:58:31 +01:00
Marius Bakke 5834a405ea
gnu: virt-manager: Do not use python setuptools for building.
* gnu/packages/qemu.scm (virt-manager)[arguments]: Set #use-setuptools? to #f.
2016-12-02 13:27:09 +01:00
Marius Bakke a189ac715d
gnu: bluez: Update to 5.43.
* gnu/packages/linux.scm (bluez): Update to 5.43.
2016-12-02 13:08:11 +01:00
Marius Bakke 17f2b485b1
gnu: mesa: Update to 13.0.2.
* gnu/packages/gl.scm (mesa): Update to 13.0.2.
[inputs]: Remove eudev.
[native-inputs]: Move 'mesa-wayland-egl-symbols-check-mips.patch' to ...
[source]: ... here.
[arguments]: Don't apply patch. Remove udev substitution.
2016-12-02 12:16:15 +01:00
Marius Bakke 2028be238b
gnu: dblatex: Update to 0.3.9.
* gnu/packages/docbook.scm (dblatex): Update to 0.3.9.
2016-12-02 12:01:42 +01:00
Marius Bakke 000c5a1163
gnu: libsigc++: Update to 2.10.0.
* gnu/packages/glib.scm (libsigc++): Update to 2.10.0.
2016-12-02 11:40:41 +01:00
Leo Famulari cb8edaac35
gnu: go-1.7: Update to 1.7.4 [security fixes].
* gnu/packages/golang.scm (go-1.7): Update to 1.7.4.
2016-12-02 03:52:06 -05:00
Eric Bavier 786b66ef75
gnu: vtk: Build with more system libraries.
* gnu/packages/vtk.scm (vtk)[inputs]: Add expat, freetype, hdf5, jpeg,
png, tiff, jsoncpp, libogg, libtheora, and zlib.
[arguments]: Use #:build-type keyword.  Add cmake flags for system
libraries.
2016-12-01 23:50:17 -06:00
Eric Bavier 0e988a8483
gnu: vtk: Upgrade to 7.1.0.
* gnu/packages/vtk.scm (vtk): Upgrade to 7.1.0.
[source]: Remove patches.  Use version-major+minor.
* gnu/packages/patches/vtk-mesa-10.patch: Delete patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-12-01 23:50:17 -06:00
Eric Bavier 996f5ece8c
gnu: jsoncpp: Build shared libraries.
* gnu/packages/serialization.scm (jsoncpp)[arguments]: New field.
2016-12-01 23:50:17 -06:00
Eric Bavier a4b0bfb195
gnu: netcdf: Upgrade to 4.4.1.1.
* gnu/packages/maths.scm (netcdf, netcdf-parallel-openmpi): Upgrade to
4.4.1.1.
[source]: Adjust patch name, add netcdf-tst_h_par.patch
* gnu/packages/patches/netcdf-config.date.patch: Rename to...
* gnu/packages/patches/netcdf-date-time.patch: ...this.  Adjust for
latest source.
* gnu/packages/patches/netcdf-tst_h_par.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Adjust patches.
2016-12-01 23:50:09 -06:00
Efraim Flashner b45baef156
gnu: offlineimap: Update to 7.0.12.
* gnu/packages/mail.scm (offlineimap): Update to 7.0.12.
2016-12-02 07:41:03 +02:00
Marius Bakke 3cc0342b45
gnu: dblatex: Do not use python setuptools for building.
* gnu/packages/docbook.scm (dblatex)[arguments]: Set #:use-setuptools?
to false.
2016-12-01 23:43:37 +01:00
Tomáš Čech 4b67098d9a
gnu: Add uget.
* gnu/packages/bittorrent.scm (uget): New variable.
2016-12-01 21:05:20 +01:00
David Thompson 02ecdeaa02
gnu: ardour: Update to 5.5.
* gnu/packages/audio.scm (ardour): Update to 5.5.
2016-12-01 13:22:24 -05:00
Efraim Flashner 329e432d60
gnu: python-gst: Update to 1.10.2.
* gnu/packages/gstreamer.scm (python-gst): Update to 1.10.2.
2016-12-01 12:56:23 +02:00
Efraim Flashner 68c2ab8c22
gnu: gst-libav: Update to 1.10.2.
* gnu/packages/gstreamer.scm (gst-libav): Update to 1.10.2.
2016-12-01 12:55:45 +02:00
Efraim Flashner acc4d15c0d
gnu: gst-plugins-ugly: Update to 1.10.2.
* gnu/packages/gstreamer.scm (gst-plugins-ugly): Update to 1.10.2.
2016-12-01 12:55:09 +02:00
Efraim Flashner 3103a71f65
gnu: gst-plugins-bad: Update to 1.10.2.
* gnu/packages/gstreamer.scm (gst-plugins-bad): Update to 1.10.2.
2016-12-01 12:54:19 +02:00
Efraim Flashner 1742132fb1
gnu: gst-plugins-good: Update to 1.10.2.
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.10.2.
[source]: Remove patches.
* gnu/packages/patches/gst-plugins-good-fix-crashes.patch,
gnu/packages/patches/gst-plugins-good-fix-invalid-read.patch,
gnu/packages/patches/gst-plugins-good-fix-signedness.patch,
gnu/packages/patches/gst-plugins-good-flic-bounds-check.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2016-12-01 12:53:30 +02:00
Efraim Flashner 2f0b72af50
gnu: gst-plugins-base: Update to 1.10.2.
* gnu/packages/gstreamer.scm (gst-plugins-base): Update to 1.10.2.
2016-12-01 12:50:30 +02:00
Efraim Flashner a8ce5851ce
gnu: gstreamer: Update to 1.10.2.
* gnu/packages/gstreamer.scm (gstreamer): Update to 1.10.2.
2016-12-01 12:49:32 +02:00
Efraim Flashner d0b9c34fb3
gnu: perl-catalyst-action-rest: Change to new uri.
This is a followup to abafd66d04.

* gnu/packages/web.scm (perl-catalyst-action-rest)[source]: Update to
new source uri.
2016-12-01 12:44:44 +02:00
Efraim Flashner 9469275790
gnu: perl-catalyst-view-tt: Change source uri.
This is a followup to 776ca1cb22.

* gnu/packages/web.scm (perl-catalyst-view-tt)[source]: Change to new
source uri.
2016-12-01 12:44:44 +02:00
Efraim Flashner 08af1a420a
gnu: perl-http-server-simple: Change source uri.
This is a followup to 5b3646f100.

* gnu/packages/web.scm (perl-http-server-simple)[source]: Update to new
source uri.
2016-12-01 12:44:43 +02:00
Ricardo Wurmus 084f8e0435
gnu: perl-http-message: Update URLs.
* gnu/packages/web.scm (perl-http-message)[source]: Update URL.
[home-page]: Likewise.
2016-12-01 11:07:13 +01:00
Andy Patterson 4ce8860df9
services: cups: Follow symlinks when installing extensions.
* gnu/services/cups.scm (union-directory): Use "stat" when calling
"find-files" to follow symlinks.
2016-12-01 11:03:20 +01:00
Efraim Flashner 8e9badce00
gnu: nasm: Update to 2.12.02.
* gnu/packages/assembly.scm (nasm): Update to 2.12.02.
2016-12-01 10:50:46 +02:00
Efraim Flashner 161fb9be8e
gnu: nasm: Switch patch to phase.
* gnu/packages/assembly.scm (nasm)[source]: Remove patch.
[arguments]: Disable ps and pdf doc outputs in new phase.
* gnu/packages/patches/nasm-no-ps-pdf.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-12-01 10:47:29 +02:00
Efraim Flashner 4181c9393d
gnu: nasm: Allow building on all systems.
* gnu/packages/assembly.scm (nasm)[supported-systems]: Remove field.
2016-12-01 09:46:56 +02:00
Mark H Weaver 9689e71d2f
gnu: icecat: Add fixes for CVE-2016-9079 and other bugs.
* gnu/packages/gnuzilla.scm (icecat)[source][patches]: Add fixes for
CVE-2016-9079 and other selected fixes from the upstream mozilla-esr45
repository.
2016-11-30 20:51:05 -05:00
Mark H Weaver a9427ce556
gnu: linux-libre: Update to 4.8.11.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.11.
2016-11-30 20:24:07 -05:00
Mark H Weaver 7d9df7ca22
gnu: linux-libre@4.4: Update to 4.4.35.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.35.
2016-11-30 20:23:11 -05:00
Tobias Geerinckx-Rice e0593466a1
gnu: btrfs-progs: Update to 4.8.5.
* gnu/packages/linux.scm (btrfs-progs): Update to 4.8.5.
2016-12-01 01:42:30 +01:00
Ludovic Courtès d30e578a00
gnu: Add Nagios.
* gnu/packages/monitoring.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-11-30 23:31:03 +01:00
Efraim Flashner ee264bbf90
gnu: perl-http-tiny: Update to 0.070.
* gnu/packages/web.scm (perl-http-tiny): Update to 0.070.
[propagated-inputs]: Add perl-mozilla-ca.
2016-11-30 21:45:18 +02:00
Efraim Flashner 5b3646f100
gnu: perl-http-server-simple: Update to 0.51.
* gnu/packages/web.scm (perl-http-server-simple): Update to 0.51.
2016-11-30 21:39:51 +02:00
Efraim Flashner a8a7227b7d
gnu: perl-http-message: Update to 6.11.
* gnu/packages/web.scm (perl-http-message): Update to 6.11.
[propagated-inputs]: Add perl-encode-locale.
2016-11-30 21:37:10 +02:00
Efraim Flashner 1ade054c2e
gnu: perl-http-cookiejar: Update to 0.008.
* gnu/packages/web.scm (perl-http-cookiejar): Update to 0.008.
[native-inputs]: Add perl-uri.
2016-11-30 21:33:05 +02:00
Efraim Flashner fb332b15aa
gnu: perl-libwww: Update to 6.15.
* gnu/packages/web.scm (perl-libwww): Update to 6.15.
[propagated-inputs]: Add perl-http-date, perl-http-message, perl-uri.
2016-11-30 21:26:50 +02:00
Efraim Flashner 1bb8ca409a
gnu: perl-http-body: Update to 1.22.
* gnu/packages/web.scm (perl-http-body): Update to 1.22.
2016-11-30 21:26:50 +02:00
Efraim Flashner 3700b27dc6
gnu: perl-html-parser: Update to 3.72.
* gnu/packages/web.scm (perl-html-parser): Update to 3.72.
[inputs]: Add perl-http-message.
2016-11-30 21:26:49 +02:00
Efraim Flashner 97c0cfdc3f
gnu: perl-finance-quote: Update to 1.38.
* gnu/packages/web.scm (perl-finance-quote): Update to 1.38.
2016-11-30 21:26:49 +02:00
Efraim Flashner 85b9c18b1a
gnu: perl-encode-locale: Update to 1.05.
* gnu/packages/web.scm (perl-encode-locale): Update to 1.05.
2016-11-30 21:26:48 +02:00
Efraim Flashner caa0194434
gnu: perl-cgi: Update to 4.35.
* gnu/packages/web.scm (perl-cgi): Update to 4.35.
2016-11-30 21:26:48 +02:00
Efraim Flashner 776ca1cb22
gnu: perl-catalyst-view-tt: Update to 0.44.
* gnu/packages/web.scm (perl-catalyst-view-tt): Update to 0.44.
[propagated-inputs]: Add perl-data-dump.
2016-11-30 21:26:48 +02:00
Efraim Flashner 0018eb57c9
gnu: perl-catalyst-view-json: Update to 0.36.
* gnu/packages/web.scm (perl-catalyst-view-json): Update to 0.36.
2016-11-30 21:26:48 +02:00
Efraim Flashner e8b20020ba
gnu: perl-catalyst-plugin-session: Update to 0.40.
* gnu/packages/web.scm (perl-catalyst-plugin-session): Update to 0.40.
[propagated-inputs]: Add perl-mro-compat.
2016-11-30 21:26:47 +02:00
Efraim Flashner 9fc4145211
gnu: perl-catalyst-plugin-accesslog: Update to 1.10.
* gnu/packages/web.scm (perl-catalyst-plugin-accesslog): Update to 1.10.
[arguments]: Enable tests.
2016-11-30 21:26:47 +02:00
Efraim Flashner abafd66d04
gnu: perl-catalyst-action-rest: Update to 1.20.
* gnu/packages/web.scm (perl-catalyst-action-rest): Update to 1.20.
[propagated-inputs]: Add perl-config-general, perl-cpanel-json-xs,
perl-xml-simple.
2016-11-30 21:26:47 +02:00
Efraim Flashner faf806dba9
gnu: perl-apache-logformat-compiler: Update to 0.33.
* gnu/packages/web.scm (perl-apache-logformat-compiler): Update to 0.33.
2016-11-30 21:26:47 +02:00
Efraim Flashner 1b49fc8fc3
gnu: perl-email-sender: Update to 1.300028.
* gnu/packages/mail.scm (perl-email-sender): Update to 1.300028.
2016-11-30 21:26:46 +02:00
Efraim Flashner 47b4cedf5d
gnu: perl-xml-xpath: Update to 1.40.
* gnu/packages/xml.scm (perl-xml-xpath): Update to 1.40.
2016-11-30 21:26:46 +02:00
Efraim Flashner 28a3b6b42c
gnu: perl-xml-compile-wsdl11: Update to 3.05.
* gnu/packages/xml.scm (perl-xml-compile-wsdl11): Update to 3.05.
2016-11-30 21:26:46 +02:00
Efraim Flashner 0c3e27a4f4
gnu: perl-xml-compile-soap: Update to 3.20.
* gnu/packages/xml.scm (perl-xml-compile-soap): Update to 3.20.
2016-11-30 21:26:45 +02:00
Efraim Flashner 6b9d3f5539
gnu: perl-xml-compile-cache: Update to 1.05.
* gnu/packages/xml.scm (perl-xml-compile-cache): Update to 1.05.
2016-11-30 21:26:45 +02:00
Efraim Flashner 18c832b02e
gnu: perl-xml-compile: Update to 1.54.
* gnu/packages/xml.scm (perl-xml-compile): Update to 1.54.
2016-11-30 21:26:45 +02:00
Efraim Flashner 4e5465f255
gnu: perl-xml-dom: Update to 1.46.
* gnu/packages/xml.scm (perl-xml-dom): Update to 1.46.
[propagated-inputs]: Add perl-xml-parser.
2016-11-30 21:26:45 +02:00
Efraim Flashner f3aa34cc5a
gnu: perl-xml-libxml-simple: Update to 0.97.
* gnu/packages/xml.scm (perl-xml-libxml-simple): Update to 0.97.
2016-11-30 21:26:44 +02:00
Efraim Flashner ffbc7d6553
gnu: perl-graph-readwrite: Update to 2.09.
* gnu/packages/xml.scm (perl-graph-readwrite): Update to 2.09.
2016-11-30 21:26:44 +02:00
Efraim Flashner 467d4c85c3
gnu: perl-dbd-sqlite: Update to 1.52.
* gnu/packages/databases.scm (perl-dbd-sqlite): Update to 1.52.
2016-11-30 21:26:44 +02:00
Efraim Flashner ebd2dbbfc1
gnu: perl-dbix-class-schema-loader: Update to 0.07046.
* gnu/packages/databases.scm (perl-dbix-class-schema-loader):
Update to 0.07046.
2016-11-30 21:26:43 +02:00
Efraim Flashner 7a462b8023
gnu: perl-dbix-class-introspectablem2m: Update to 0.001002.
* gnu/packages/databases.scm (perl-dbix-class-introspectablem2m):
Update to 0.001002.
2016-11-30 21:26:43 +02:00
Efraim Flashner 180cb81b4c
gnu: perl-dbix-class-cursor-cached: Update to 1.001004.
* gnu/packages/databases.scm (perl-dbix-class-cursor-cached):
Update to 1.001004.
2016-11-30 21:26:43 +02:00
Efraim Flashner 5d78d746af
gnu: perl-dbix-class: Update to 0.082840.
* gnu/packages/databases.scm (perl-dbix-class): Update to 0.082840.
2016-11-30 21:26:43 +02:00
Efraim Flashner f363d5d854
gnu: perl-email-simple: Update to 2.211.
* gnu/packages/mail.scm (perl-email-simple): Update to 2.211.
2016-11-30 21:26:42 +02:00
Efraim Flashner e4146b0485
gnu: perl-namespace-autoclean: Update to 0.28.
* gnu/packages/perl.scm (perl-namespace-autoclean): Update to 0.28.
2016-11-30 21:26:42 +02:00
Efraim Flashner 199bbbe1ed
gnu: perl-class-method-modifiers: Update to 2.12.
* gnu/packages/perl.scm (perl-class-method-modifiers): Update to 2.12.
2016-11-30 21:26:42 +02:00
Efraim Flashner a883ba0246
gnu: perl-email-mime-contenttype: Update to 1.018.
* gnu/packages/mail.scm (perl-email-mime-contenttype): Update to 1.018.
2016-11-30 21:26:41 +02:00
Efraim Flashner b4522b9855
gnu: perl-email-mime: Update to 1.937.
* gnu/packages/mail.scm (perl-email-mime): Update to 1.937.
2016-11-30 21:26:41 +02:00
Efraim Flashner 1fb37ef06e
gnu: perl-email-messageid: Update to 1.406.
* gnu/packages/mail.scm (perl-email-messageid): Update to 1.406.
2016-11-30 21:26:41 +02:00
Efraim Flashner 151bba2b3d
gnu: perl-email-address: Update to 1.908.
* gnu/packages/mail.scm (perl-email-address): Update to 1.908.
2016-11-30 21:26:41 +02:00
Marius Bakke bc118f1a03
gnu: cairo: Eliminate graft.
* gnu/packages/gtk.scm (cairo)[replacement]: Remove field.
[source]: Add patch from 'cairo/fixed'.
(cairo-xcb)[source]: Inherit from cairo.
[replacement]: Remove field.
(cairo/fixed): Remove variable.
* gnu/packages/pdf.scm (poppler)[inputs]: Remove cairo replacement.
2016-11-30 18:31:37 +01:00
Marius Bakke 8b6aee5f82
gnu: dbus: Update to 1.10.14.
* gnu/packages/glib.scm (dbus): Update to 1.10.14.
2016-11-30 18:26:15 +01:00
Marius Bakke 86cf191426
gnu: dbus: Eliminate graft.
* gnu/packages/glib.scm (dbus)[replacement]: Remove field.
[version]: Update to 1.10.12.
[source]: Update hash.
(dbus-1.10.12): Remove variable.
2016-11-30 18:26:05 +01:00
Marius Bakke 35bbe88b3c
gnu: pixman: Eliminate graft.
* gnu/packages/xdisorg.scm (pixman)[replacement]: Remove field.
[source]: Add patch from 'pixman/fixed'.
(pixman/fixed): Remove variable.
2016-11-30 18:25:57 +01:00
Marius Bakke 8a7cbc882a
Merge branch 'master' into staging 2016-11-30 18:24:32 +01:00
Ludovic Courtès 72f0c5ea3c
gnu: iw: Update to 4.9.
* gnu/packages/linux.scm (iw): Update to 4.9.
2016-11-30 17:35:21 +01:00
Ludovic Courtès 873c469e74
gnu: pciutils: Update to 3.5.2.
* gnu/packages/pciutils.scm (pciutils): Update to 3.5.2.
2016-11-30 17:35:21 +01:00
Ludovic Courtès 130079ae27
tests: Create a copy-on-write image instead of copying eagerly.
* gnu/tests/install.scm (qemu-command/writable-image): Invoke 'qemu-img
-o backing_file' instead of calling 'copy-file'.
2016-11-30 17:35:20 +01:00
Leo Famulari dcd9d1637a
gnu: hdf5: Update to 1.8.18 [fixes CVE-2016-{4330,4331,4332,4333}].
* gnu/packages/maths.scm (hdf5): Update to 1.8.18.
[source]: Add alternate URL.
2016-11-30 11:16:18 -05:00
Ricardo Wurmus 819c1945d1
services: nginx: Join strings with spaces.
* gnu/services/web.scm (config-domain-strings, config-index-strings):
Use "string-join" to join strings with spaces.
2016-11-30 16:03:18 +01:00
Ricardo Wurmus 7edd195ac8
gnu: gcj: Conditionally apply patch for armhf.
* gnu/packages/gcc.scm (gcj)[source]: Inherit from "gcc" package.
[native-inputs]: Conditionally add arm-patch.
[arguments]: Conditionally add phase "apply-arm-patch".
2016-11-30 16:03:11 +01:00
Tobias Geerinckx-Rice 7d07e2a527
gnu: gnutls: Update 3.5.6.
* gnu/packages/tls.scm (gnutls): Update to 3.5.6.
2016-11-30 14:26:28 +01:00
Manolis Ragkousis 9b5f498def
gnu: glibc-hurd: Force mach/hurd/libpthread subdirs to build first.
* gnu/packages/base.scm (glibc/hurd)[arguments]: Replace 'build' phase.

Co-authored-by: Ludovic Court<C3><A8>s <ludo@gnu.org>
2016-11-30 15:17:38 +02:00
Leo Famulari 1d60f7c2b3
gnu: borg: Fix the test suite.
* gnu/packages/backup.scm (borg)[arguments]: Use
add-installed-pythonpath and disable tests related to FUSE.
2016-11-30 01:52:16 -05:00
Leo Famulari 663d5b5330
gnu: git: Update to 2.11.0.
* gnu/packages/version-control.scm (git): Update to 2.11.0.
2016-11-29 23:54:37 -05:00
Mathieu Lirzin a7cf4eb6d9
services: Add 'cuirass-service'.
* gnu/services/cuirass.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Continuous integration): New node.
2016-11-29 23:13:11 +01:00
Mathieu Lirzin 365de1e7a5
gnu: Add Cuirass.
* gnu/packages/ci.scm (cuirass): New variable.

Co-authored-by: Jan Nieuwenhuizen <janneke@gnu.org>
2016-11-29 23:10:11 +01:00
David Craven 43ddcd723e
gnu: guix-0.11.0: Add guile-ssh to inputs.
* gnu/packages/package-management.scm (guile-ssh)[inputs]: Add
  guile-ssh.
  [arguments]: Add guile-ssh to GUILE_LOAD_PATH.
2016-11-29 22:40:03 +01:00
Ricardo Wurmus a19a6d3ac8
gnu: frescobaldi: Disable tests.
* gnu/packages/music.scm (frescobaldi)[arguments]: Disable tests.
2016-11-29 22:06:50 +01:00
John Darrington 660516e875
gnu: Add zzuf
* gnu/packages/debug.scm (zzuf): New variable.
2016-11-29 21:32:09 +01:00
Tobias Geerinckx-Rice 3084a99084
gnu: libxi: Update to 1.7.8.
* gnu/packages/xorg.scm (libxi): Update to 1.7.8.
2016-11-29 19:16:15 +01:00
Tobias Geerinckx-Rice 7f81d7f4a5
gnu: libxfont: Update to 1.5.2.
* gnu/packages/xorg.scm (libxfont): Update to 1.5.2.
2016-11-29 19:15:48 +01:00
Tobias Geerinckx-Rice 7e49a851b5
gnu: gphoto2, libgphoto2: Use libjpeg-turbo.
* gnu/packages/photo.scm (gphoto2, libgphoto2)[inputs]: Add libjpeg-turbo.
2016-11-29 19:15:47 +01:00
Tobias Geerinckx-Rice 9b81876f5f
gnu: spice: Use libjpeg-turbo instead of libjpeg.
* gnu/packages/spice.scm (spice)[inputs]: Use libjpeg-turbo as suggested
during the build.
2016-11-29 19:15:47 +01:00
Tobias Geerinckx-Rice 7cba7647a5
gnu: icecat: Use libjpeg-turbo instead of bundled libjpeg.
* gnu/packages/gnuzilla.scm (icecat)[source]: Remove bundled libjpeg, which
is actually libjpeg-turbo.
[inputs]: Add libjpeg-turbo.
[arguments]: Use it.
2016-11-29 19:15:47 +01:00
Tobias Geerinckx-Rice 37e05d64e4
gnu: Add libjpeg-turbo.
* gnu/packages/image.scm (libjpeg-turbo): New variable.
2016-11-29 19:15:47 +01:00
Hartmut Goebel dc2ef09ad7
gnu: kauth: Fix cmake macros to be used by other packages.
* gnu/packages/kde-framework.scm (kauth)[phases]: New phase
  fix-cmake-install-paths.
2016-11-29 19:13:40 +01:00
Hartmut Goebel 7b722e3cba
gnu: extra-cmake-modules: Always install into /lib and not into /lib64.
* gnu/packages/kde-frameworks.scm (extra-cmake-modules)[phases]:
  New phase fix-lib-path.
2016-11-29 19:11:09 +01:00
Hartmut Goebel c1265fcc70
gnu: Add ksyntaxhighlighting.
* gnu/packages/kde-frameworks.scm (ksyntaxhighlighting): New variable.
2016-11-29 19:11:09 +01:00
Hartmut Goebel 7feff6f6dc
gnu: Update kde-frameworks to 5.28.
* gnu/packages/kde-frameworks.scm (kpackage): Update to 5.28.1
  (extra-cmake-modules, attica, bluez-qt, breeze-icons, kapidox,
  karchive, kcodecs, kconfig, kcoreaddons, kdbusaddons, kdnssd,
  kguiaddons, ki18n, kidletime, kitemmodels, kitemviews, kplotting,
  kwayland, kwidgetsaddons, kwindowsystem, modemmanager-qt,
  networkmanager-qt, oxygen-icons, solid, sonnet, threadweaver, kauth,
  kcompletion, kcrash, kdoctools, kfilemetadata, kimageformats,
  kjobwidgets, knotifications, kpty, kunitconversion, baloo,
  kactivities, kactivities-stats, kbookmarks, kcmutils,
  kconfigwidgets, kdeclarative, kded, kdesignerplugin, kdesu,
  kemoticons, kglobalaccel, kiconthemes, kinit, kio, knewstuff,
  knotifyconfig, kparts, kpeople, krunner, kservice, ktexteditor,
  ktextwidgets, kwallet, kxmlgui, kxmlrpcclient, plasma-framework,
  frameworkintegration): Update to 5.28.0
2016-11-29 19:11:09 +01:00
Hartmut Goebel 03e856ddf5
Merge branch 'python-build-system'. 2016-11-29 19:06:27 +01:00
Hartmut Goebel 80983df357
gnu: python2-discogs-client: Remove python2-setuptools from inputs.
* gnu/packages/music.scm (python2-discogs-client): Use simply
  "package-with-python2". Remove inheriting from python-discogs-client
  since adding python2-setuptools to [native-inputs] has been the sole
  reason for inheriting.
  (python-discogs-client) Remove the now needless [properties]
  "python2-variant".
2016-11-29 19:02:35 +01:00
Efraim Flashner 072f1e22cc
gnu: dovecot: Update to 2.2.26.0.
* gnu/packages/mail.scm (dovecot): Update to 2.2.26.0.
[arguments]: Patch shebangs in test file.
2016-11-29 19:52:21 +02:00
Hartmut Goebel 3bf4280659
Merge branch 'master' into python-build-system 2016-11-29 18:47:16 +01:00
Hartmut Goebel 2cb64f3b1b
gnu: wicd: Fix build.
* gnu/packages/wicd.scm (wicd) [arguments]: Disable installation
  via setuptools (and --single-version-externally-managed).
2016-11-29 18:39:16 +01:00
Hartmut Goebel 388606a72b
gnu: wxPython: Remove useless inputs.
* gnu/packages/wxwidgets.scm (python2-wxpython) [native-inputs]: Remove
  setuptools, which is already included in python.
2016-11-29 18:39:15 +01:00
Hartmut Goebel 6f1dcafd81
gnu: wxPython: Fix build.
* gnu/packages/wxwidgets.scm (python2-wxpython) [arguments]: Disable
  installation via setuptools (and --single-version-externally-managed).
2016-11-29 18:39:14 +01:00
Ludovic Courtès 683c5ab70a
gnu: oxygen-icons: Add 'upstream-name' property.
Fixes <http://bugs.gnu.org/25020>.
Reported by Hartmut Goebel <h.goebel@goebel-consult.de>.

* gnu/packages/kde-frameworks.scm (oxygen-icons)[properties]: New
field.
2016-11-29 16:12:32 +01:00
Efraim Flashner a409de9811
gnu: efl: Update to 1.18.3.
* gnu/packages/enlightenment.scm (efl): Update to 1.18.3.
2016-11-29 16:12:47 +02:00
Efraim Flashner 07cda02c5b
gnu: wine: Use 'modify-phases' syntax.
* gnu/packages/wine.scm (wine)[arguments]: Use 'modify-phases' syntax.
2016-11-29 16:12:47 +02:00
Efraim Flashner 658c987fdd
gnu: wine: Update to 1.9.24.
* gnu/packages/wine.scm (wine): Update to 1.9.24.
[home-page]: Use https.
2016-11-29 16:12:41 +02:00
Ricardo Wurmus ded69d6f86
gnu: Add non-session-manager.
* gnu/packages/music.scm (non-session-manager): New variable.
2016-11-29 10:59:17 +01:00
Efraim Flashner 0944bb1a6a
gnu: offlineimap: Update to 7.0.10.
* gnu/packages/mail.scm (offlineimap): Update to 7.0.10.
2016-11-29 11:02:39 +02:00
Efraim Flashner c51d926c74
gnu: cairo: Fix CVE-2016-9082.
* gnu/packages/gtk.scm (cairo)[replacement]: New field.
(cairo/fixed): New variable.
(cairo-xcb)[source]: Use patch.
[replacement]: New field, set false.
* gnu/packages/pdf.scm (poppler)[inputs]: Custom cairo should be
replaced by a new custom patched cairo.
* gnu/packages/patches/cairo-CVE-2016-9082.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2016-11-29 09:45:48 +02:00
Efraim Flashner eb55f01821
gnu: Add viewnior.
* gnu/packages/image-viewers.scm (viewnior): New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-11-29 09:38:33 +02:00
Efraim Flashner 22486fbea6
gnu: Add wgetpaste.
* gnu/packages/wget.scm (wgetpaste): New variable.
2016-11-29 09:35:39 +02:00
Efraim Flashner 3e757c005f
gnu: aspell-dict-en: Update to 2016.11.20-0.
* gnu/packages/aspell.scm (aspell-dict-en): Update to 2016.11.20-0.
2016-11-29 09:35:11 +02:00
John Darrington 0c85db79f7
gnu: Allow nfs file systems to be automatically mounted.
* gnu/build/file-systems.scm (mount-file-system): Append target addr= when
mounting nfs filesystems.
2016-11-29 07:21:15 +01:00
Leo Famulari f265a3cee5
gnu: libarchive: Update to 3.2.2.
* gnu/packages/backup.scm (libarchive): Update to 3.2.2.
[source]: Remove obsolete patches.
* gnu/packages/patches/libarchive-7zip-heap-overflow.patch,
gnu/packages/patches/libarchive-fix-filesystem-attacks.patch,
gnu/packages/patches/libarchive-fix-symlink-check.patch,
gnu/packages/patches/libarchive-safe_fprintf-buffer-overflow.patch:
Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2016-11-28 21:10:25 -05:00
Leo Famulari e673a1df29
gnu: libarchive: Fix typo in 'libarchive-safe_fprintf-buffer-overflow.patch'.
* gnu/packages/patches/libarchive-safe_fprintf-buffer-overflow.patch:
Use correct URL in patch documentation.
2016-11-28 21:10:19 -05:00
Marius Bakke 7c635ed6f7
gnu: perl-dbd-mysql: Update to 4.041 [security fix].
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.041.
[source]: Update CPAN URI.
2016-11-28 23:05:23 +01:00
Ludovic Courtès d2bcf35e18
vm: Avoid needless file copy in 'load-in-linux-vm'.
Reported by Chris Webber.

* gnu/build/vm.scm (load-in-linux-vm)[image-file]: Remove.  Directly
refer to OUTPUT instead.
2016-11-28 22:58:18 +01:00
Ricardo Wurmus bd3be46e7f
gnu: Add r-gkmsvm.
* gnu/packages/bioinformatics.scm (r-gkmsvm): New variable.
2016-11-28 22:43:18 +01:00
Ricardo Wurmus 419a8a186f
gnu: Add r-rocr.
* gnu/packages/statistics.scm (r-rocr): New variable.
2016-11-28 22:43:18 +01:00
Ricardo Wurmus 0cfe0570f2
gnu: Add r-gplots.
* gnu/packages/statistics.scm (r-gplots): New variable.
2016-11-28 22:43:18 +01:00
Ricardo Wurmus 6034cd905e
gnu: Add r-gdata.
* gnu/packages/statistics.scm (r-gdata): New variable.
2016-11-28 22:43:18 +01:00
Ricardo Wurmus 2d9fb1702f
gnu: Add r-seqgl.
* gnu/packages/bioinformatics.scm (r-seqgl): New variable.
2016-11-28 22:43:17 +01:00
Ricardo Wurmus c827f20286
gnu: Add r-chipkernels.
* gnu/packages/bioinformatics.scm (r-chipkernels): New variable.
2016-11-28 22:43:17 +01:00
Ricardo Wurmus 1571f90e35
gnu: Add r-gtools.
* gnu/packages/statistics.scm (r-gtools): New variable.
2016-11-28 22:43:17 +01:00
Ricardo Wurmus f05c7eb48d
gnu: Add r-kernlab.
* gnu/packages/machine-learning.scm (r-kernlab): New variable.
2016-11-28 22:43:17 +01:00
Ricardo Wurmus 6335bf1c80
gnu: Add r-sfsmisc.
* gnu/packages/statistics.scm (r-sfsmisc): New variable.
2016-11-28 22:43:17 +01:00
Ricardo Wurmus d71605294f
gnu: Add r-wgcna.
* gnu/packages/bioinformatics.scm (r-wgcna): New variable.
2016-11-28 22:43:17 +01:00
Ricardo Wurmus 1bd46f5520
gnu: Add r-fastcluster.
* gnu/packages/statistics.scm (r-fastcluster): New variable.
2016-11-28 22:43:16 +01:00
Ricardo Wurmus c4708783ee
gnu: Add r-preprocesscore.
* gnu/packages/statistics.scm (r-preprocesscore): New variable.
2016-11-28 22:43:16 +01:00
Ricardo Wurmus c9a6671490
gnu: Add r-dynamictreecut.
* gnu/packages/statistics.scm (r-dynamictreecut): New variable.
2016-11-28 22:43:16 +01:00
Ricardo Wurmus e619a5c245
gnu: Add r-r4rna.
* gnu/packages/bioinformatics.scm (r-r4rna): New variable.
2016-11-28 22:43:16 +01:00
Ricardo Wurmus e7d16ad161
gnu: Add r-spams.
* gnu/packages/statistics.scm (r-spams): New variable.
2016-11-28 22:43:16 +01:00
Ricardo Wurmus 9f5435d963
gnu: Add r-googlesheets.
* gnu/packages/statistics.scm (r-googlesheets): New variable.
2016-11-28 22:43:16 +01:00
Ricardo Wurmus d427e03eee
gnu: Add r-cellranger.
* gnu/packages/statistics.scm (r-cellranger): New variable.
2016-11-28 22:43:15 +01:00
Ricardo Wurmus 58612fd2c8
gnu: Add r-rematch.
* gnu/packages/statistics.scm (r-rematch): New variable.
2016-11-28 22:43:15 +01:00
Ricardo Wurmus e48ddb9628
doc: Suggest installing gvfs.
* gnu/system/examples/desktop.tmpl: Add gvfs to the system-wide list of
packages.
2016-11-28 22:09:38 +01:00
Ricardo Wurmus eb21d24806
gnu: lv2: Update to 1.14.0.
* gnu/packages/audio.scm (lv2): Update to 1.14.0.
2016-11-28 22:08:37 +01:00
Ricardo Wurmus 1bbe79594e
gnu: non-sequencer: Update to 1.9.5-2.a22f33f.
* gnu/packages/music.scm (non-sequencer): Update to 1.9.5-2.a22f33f.
2016-11-28 22:07:20 +01:00
Efraim Flashner 5e9cce55b5
gnu: ntp: Update to 4.2.8p9.
* gnu/packages/ntp.scm (ntp): Update to 4.2.8p9.
2016-11-28 21:56:30 +02:00
Efraim Flashner d35de59b64
gnu: ntp: Fix indentation.
* gnu/packages/ntp.scm (ntp): Fix indentation to only use spaces.
2016-11-28 20:53:14 +02:00
John Darrington f0ddc5e55b
gnu: Add editres.
* gnu/packages/xorg.scm (editres): New variable.
2016-11-28 18:22:15 +01:00
Ben Woodcroft 9926875572
gnu: Add newick-utils.
* gnu/packages/bioinformatics.scm (newick-utils): New variable.
2016-11-28 09:00:41 +10:00
Efraim Flashner c7a70c336f
gnu: jasper: Update to 2.0.0 [fixes security issues].
* gnu/packages/image.scm (jasper): Update to 2.0.0.
[build-system]: Switch to cmake-build-system.
2016-11-27 22:19:55 +02:00
Tobias Geerinckx-Rice f6c44a3f04
gnu: gphoto2: Update to 2.5.11.
* gnu/packages/photo.scm (gphoto2): Update to 2.5.11.
2016-11-27 20:58:18 +01:00
Tobias Geerinckx-Rice 69874f5fd2
gnu: libgphoto2: Update to 2.5.11.
* gnu/packages/photo.scm (libgphoto2): Update to 2.5.11.
2016-11-27 20:58:18 +01:00
Leo Famulari f27ec24d88
gnu: beets: Update to 1.4.1.
* gnu/packages/music.scm (beets): Update to 1.4.1.
[inputs]: Add python2-discogs-client.
2016-11-27 14:49:36 -05:00
Leo Famulari d3db5efbf9
gnu: Add python-discogs-client.
* gnu/packages/music.scm (python-discogs-client,
python2-discogs-client): New variables.
2016-11-27 14:49:36 -05:00
Leo Famulari 6782444764
gnu: python-rarfile: Update to 2.8.
* gnu/packages/python.scm (python-rarfile, python2-rarfile): Update to 2.8.
[source]: Remove obsolete patch.
* gnu/packages/patches/python-rarfile-fix-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-11-27 14:49:35 -05:00
Leo Famulari 8c4964dd51
gnu: python-jellyfish: Update to 0.5.6.
* gnu/packages/python.scm (python-jellyfish, python2-jellyfish): Update to
0.5.6.
2016-11-27 14:49:35 -05:00
Leo Famulari b04d9b97c4
gnu: python-pylast: Update 1.6.0.
* gnu/packages/music.scm (python-pylast, python2-pylast): Update to 1.6.0.
2016-11-27 14:49:35 -05:00
Leo Famulari daedf34db9
gnu: python-musicbrainzngs: Update to 0.6.
* gnu/packages/music.scm (python-musicbrainzngs, python2-musicbrainzngs): Update
to 0.6.
[arguments]: Disable the test suites.
2016-11-27 14:49:35 -05:00
Leo Famulari 38e81a2c55
gnu: python-munkres: Update to 1.0.8.
* gnu/packages/python.scm (python-munkres, python2-munkres): Update to 1.0.8.
2016-11-27 14:49:34 -05:00
Leo Famulari 4228a79e6f
gnu: python-mutagen: Update to 1.35.1.
* gnu/packages/music.scm (python-mutagen, python2-mutagen): Update to 1.35.1.
[native-inputs]: Add python-pytest.
2016-11-27 14:49:30 -05:00
Ricardo Wurmus 1bf5a7e920
gnu: gcj: Inherit source field from "gcc".
* gnu/packages/gcc.scm (gcj)[source]: Inherit source from "gcc" package.
2016-11-27 19:00:57 +01:00
Ricardo Wurmus bac6409970
gnu: gcj: Correct paths in ARM patch.
* gnu/packages/patches/gcj-arm-mode.patch: Strip directories.
2016-11-27 18:59:54 +01:00
Marius Bakke 8c4140e49e
gnu: notmuch: Update to 0.23.3.
* gnu/packages/mail.scm (notmuch): Update to 0.23.3.
[arguments]: Re-enable previously failing tests.
2016-11-27 18:29:44 +01:00
Leo Famulari cd569f0d29
gnu: gcj: Fix typo in patch filename.
This is a followup to commit dbf8f84f15.

Reported by quigonjinn on #guix.

* gnu/packages/gcc.scm (gcj)[source]: Fix typo.
2016-11-27 10:57:33 -05:00
Danny Milosavljevic 7574cecf0f
gnu: python2-flask: Pick up python-flask's native-inputs.
* gnu/packages/python.scm (python2-flask)[native-inputs]:
  Pick up python-flask's native-inputs.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-27 13:23:53 +01:00
Marius Bakke cf7daaf5da
gnu: docbook-xsl: Update to 1.79.1.
* gnu/packages/docbook.scm (docbook-xsl): Update to 1.79.1.
2016-11-27 11:26:49 +01:00
Marius Bakke 988e1dca4b
gnu: udisks: Update to 2.1.8.
* gnu/packages/freedesktop.scm (udisks): Update to 2.1.8.
[home-page]: Use HTTPS.
2016-11-27 11:13:50 +01:00
Maxim Cournoyer aef5055ff9
gnu: udisks: Add manpages.
* gnu/packages/freedesktop.scm (udisks)[native-inputs]: Add docbook-xml
and docbook-xsl.
[arguments]: Add #:make-flags to specify XML catalog files for manuals.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-27 11:10:31 +01:00
Ricardo Wurmus dbf8f84f15
gnu: gcj: Fix build on armhf.
* gnu/packages/patches/gcj-arm-mode.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.
* gnu/packages/gcc.scm (gcj): Add patch.
[arguments]: Delete failing tests.
2016-11-27 10:04:57 +01:00
Ricardo Wurmus 253cdd6c14
gnu: Add biber-2.5.
* gnu/packages/tex.scm (biber-2.5): New variable.
2016-11-27 09:48:43 +01:00
Ricardo Wurmus d400068085
gnu: Add biber.
* gnu/packages/tex.scm (biber): New variable.
2016-11-27 09:48:43 +01:00
Ricardo Wurmus ebcf74daf8
gnu: Add perl-text-bibtex.
* gnu/packages/tex.scm (perl-text-bibtex): New variable.
2016-11-27 09:48:43 +01:00
Ricardo Wurmus 93863a5e72
gnu: Add perl-xml-libxslt.
* gnu/packages/xml.scm (perl-xml-libxslt): New variable.
2016-11-27 09:48:43 +01:00
Ricardo Wurmus df669244f9
gnu: perl-unicode-linebreak: Update to 2016.003.
* gnu/packages/perl.scm (perl-unicode-linebreak): Update to 2016.003.
2016-11-27 09:48:43 +01:00
Ricardo Wurmus 5d2ecbffb2
gnu: Add perl-unicode-collate.
* gnu/packages/perl.scm (perl-unicode-collate): New variable.
2016-11-27 09:48:43 +01:00
Ricardo Wurmus 37e7a4929f
gnu: Add perl-unicode-normalize.
* gnu/packages/perl.scm (perl-unicode-normalize): New variable.
2016-11-27 09:48:42 +01:00
Ricardo Wurmus dc32ee5381
gnu: Add perl-text-roman.
* gnu/packages/perl.scm (perl-text-roman): New variable.
2016-11-27 09:48:42 +01:00
Ricardo Wurmus 44c31aaae8
gnu: Add perl-text-csv-xs.
* gnu/packages/perl.scm (perl-text-csv-xs): New variable.
2016-11-27 09:48:42 +01:00
Ricardo Wurmus 0ef5191c88
gnu: Add perl-sort-key.
* gnu/packages/perl.scm (perl-sort-key): New variable.
2016-11-27 09:48:42 +01:00
Ricardo Wurmus 3521dc9293
gnu: Add perl-mozilla-ca.
* gnu/packages/perl.scm (perl-mozilla-ca): New variable.
2016-11-27 09:48:42 +01:00
Ricardo Wurmus 37115dc650
gnu: Add perl-lingua-translit.
* gnu/packages/perl.scm (perl-lingua-translit): New variable.
2016-11-27 09:48:41 +01:00
Ricardo Wurmus e9ef394ac9
gnu: Add perl-ipc-cmd.
* gnu/packages/perl.scm (perl-ipc-cmd): New variable.
2016-11-27 09:48:41 +01:00
Ricardo Wurmus 81157cf5a7
gnu: Add perl-extutils-libbuilder.
* gnu/packages/perl.scm (perl-extutils-libbuilder): New variable.
2016-11-27 09:48:41 +01:00
Ricardo Wurmus 0185442003
gnu: Add perl-encode-hanextra.
* gnu/packages/perl.scm (perl-encode-hanextra): New variable.
2016-11-27 09:48:41 +01:00
Ricardo Wurmus 2bc1b85ce6
gnu: Add perl-encode-jis2k.
* gnu/packages/perl.scm (perl-encode-jis2k): New variable.
2016-11-27 09:48:41 +01:00
Ricardo Wurmus 891d9679a2
gnu: Add perl-encode-eucjpascii.
* gnu/packages/perl.scm (perl-encode-eucjpascii): New variable.
2016-11-27 09:48:41 +01:00
Ricardo Wurmus 49a3fcc13c
gnu: perl-encode-detect: Move to alphabetical position.
* gnu/packages/perl.scm (perl-encode-detect): Move variable definition.
2016-11-27 09:48:40 +01:00
Ricardo Wurmus 7a146c2528
gnu: Add perl-datetime-calendar-julian.
* gnu/packages/perl.scm (perl-datetime-calendar-julian): New variable.
2016-11-27 09:48:40 +01:00
Ricardo Wurmus 36dd594316
gnu: Add perl-date-simple.
* gnu/packages/perl.scm (perl-date-simple): New variable.
2016-11-27 09:48:40 +01:00
Ricardo Wurmus cc3dafbb02
gnu: Add perl-data-uniqid.
* gnu/packages/perl.scm (perl-data-uniqid): New variable.
2016-11-27 09:48:40 +01:00
Ricardo Wurmus 9413e95f59
gnu: Add perl-data-compare.
* gnu/packages/perl.scm (perl-data-compare): New variable.
2016-11-27 09:48:40 +01:00
Ricardo Wurmus adbf4b944c
gnu: Add perl-business-ismn.
* gnu/packages/perl.scm (perl-business-ismn): New variable.
2016-11-27 09:48:40 +01:00
Ricardo Wurmus 296663839b
gnu: Add perl-tie-cycle.
* gnu/packages/perl.scm (perl-tie-cycle): New variable.
2016-11-27 09:48:39 +01:00
Ricardo Wurmus e0b6accf19
gnu: Add perl-business-issn.
* gnu/packages/perl.scm (perl-business-issn): New variable.
2016-11-27 09:48:39 +01:00
Ricardo Wurmus 72f8646ef5
gnu: Add perl-business-isbn.
* gnu/packages/perl.scm (perl-business-isbn): New variable.
2016-11-27 09:48:39 +01:00
Ricardo Wurmus a3f5beb7a2
gnu: Add perl-business-isbn-data.
* gnu/packages/perl.scm (perl-business-isbn-data): New variable.
2016-11-27 09:48:39 +01:00
Ricardo Wurmus 3f1df54cc0
gnu: Add perl-autovivification.
* gnu/packages/perl.scm (perl-autovivification): New variable.
2016-11-27 09:48:39 +01:00
Ricardo Wurmus d4ba9a5f21
gnu: Add perl-mojolicious.
* gnu/packages/perl-web.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-11-27 09:48:39 +01:00
Ricardo Wurmus 45591fd7fd
gnu: Add threaded variants of fftw and fftwf for Ardour and mod-host.
* gnu/packages/algebra.scm (fftw-with-threads, fftwf-with-threads): New
variables.
* gnu/packages/audio.scm (ardour)[inputs]: Replace "fftw" and "fftwf"
with "fftw-with-threads" and "fftwf-with-threads", respectively.
* gnu/packages/music.scm (mod-host)[inputs]: Likewise.
2016-11-27 09:48:16 +01:00
Efraim Flashner bd128e2e8f
gnu: mpfr: Update to 3.1.5.
* gnu/packages/multiprecision.scm (mpfr): Update to 3.1.5.
2016-11-27 10:47:06 +02:00
Efraim Flashner 51c8e2996c
gnu: sed: Use 'modify-phases' syntax.
* gnu/packages/base.scm (sed)[arguments]: Use 'modify-phases' syntax.
2016-11-27 10:25:45 +02:00
Efraim Flashner b7a5a4821f
gnu: grep: Update to 2.26.
* gnu/packages/base.scm (grep): Update to 2.26.
2016-11-27 10:23:59 +02:00
Efraim Flashner 31bd09e5a8
gnu: nettle: Update to 3.3.
* gnu/packages/nettle.scm (nettle): Update to 3.3.
[home-page]: Use https.
2016-11-27 09:44:48 +02:00
Efraim Flashner feefbb0946
gnu: bash: Update to patch level 5.
* gnu/packages/bash.scm (%patch-url-seqno): Update for bash-4.4.
(%patch-series-4.4): Add patches 1 to 5.
2016-11-27 09:24:40 +02:00
Efraim Flashner c296d5d119
gnu: icu4c: Use 'modify-phases' syntax.
* gnu/packages/icu4c.scm (icu4c)[arguments]: Use 'modify-phases' syntax.
2016-11-27 09:24:40 +02:00
Efraim Flashner 5499de02ca
gnu: icu4c: Update to 58.1.
* gnu/packages/icu4c.scm (icu4c): Update to 58.1.
[source]: Download from their website.
[arguments]: Remove extra bash replacement.
2016-11-27 09:24:40 +02:00
宋文武 a82f0b3617
tests: Add 'opensmtpd-service-type' test.
* gnu/tests/mail.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2016-11-27 10:15:43 +08:00
Leo Famulari b46cefc954
gnu: libsodium: Update to 1.0.11.
* gnu/packages/crypto.scm (libsodium): Update to 1.0.11.
2016-11-26 20:48:34 -05:00
Tobias Geerinckx-Rice d32f4800d6
gnu: libgphoto2: Add XML support.
* gnu/packages/photo.scm (libgphoto2)[inputs]: Add libxml2.
2016-11-27 01:43:40 +01:00
Tobias Geerinckx-Rice 9dcc9bbf3b
gnu: gphoto2: Update to 2.5.10.
* gnu/packages/photo.scm (gphoto2): Update to 2.5.10.
2016-11-27 01:43:40 +01:00
Tobias Geerinckx-Rice 35c0ad4448
gnu: libgphoto2: Update to 2.5.10.
* gnu/packages/photo.scm (libgphoto2): Update to 2.5.10.
2016-11-27 01:43:39 +01:00
Toni Reina c3e2a2471c
gnu: Add Mozilla Fira Mono font.
* gnu/packages/fonts.scm (font-fira-mono): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-26 23:21:37 +01:00
Leo Famulari e30abbbb02
gnu: cyrus-sasl: Incorporate grafted patch.
* gnu/packages/cyrus-sasl.scm (cyrus-sasl)[source]: Use
'cyrus-sasl-CVE-2013-4122.patch'.
[replacement]: Remove field.
(cyrus-sasl/fixed): Remove variable.
2016-11-26 16:23:42 -05:00
Leo Famulari a282cdae10
Merge branch 'master' into core-updates 2016-11-26 16:21:47 -05:00
Leo Famulari cd65d600ac
gnu: cyrus-sasl: Fix CVE-2013-4122.
* gnu/packages/patches/cyrus-sasl-CVE-2013-4122.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cyrus-sasl.scm (cyrus-sasl)[replacement]: New field.
(cyrus-sasl/fixed): New variable.
[source]: Use patch.
2016-11-26 16:21:02 -05:00
Efraim Flashner 439a2f62ce
gnu: ffmpeg: Update to 3.2.1.
* gnu/packages/video.scm (ffmpeg): Update to 3.2.1.
2016-11-26 22:53:13 +02:00
Leo Famulari 9e46245b89
gnu: gst-plugins-good: Fix CVE-2016-{9634,9635,9636} and other security issues.
* gnu/packages/patches/gst-plugins-good-fix-crashes.patch,
gnu/packages/patches/gst-plugins-good-fix-invalid-read.patch,
gnu/packages/patches/gst-plugins-good-fix-signedness.patch,
gnu/packages/patches/gst-plugins-good-flic-bounds-check.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gstreamer.scm (gst-plugins-good): Use them.
2016-11-26 14:27:24 -05:00
Julien Lepiller 5305ed2002
services: Factorize configuration abstraction.
* gnu/services/mail.scm and gnu/services/cups.scm (&configuration-error)
(configuration-error, configuration-field-error)
(configuration-missing-field, configuration-field, serialize-configuration)
(validate-configuration, define-configuration, uglify-field-name)
(serialize-field, serialize-package, serialize-string)
(serialize-space-separated-string-list, space-separated-string-list?)
(serialize-file-name, file-name?, serialize-field-name)
(generate-documentation): Move duplicate code...
* gnu/services/configuration.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add configuration.scm.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-26 19:46:01 +01:00
Leo Famulari cf3678df6e
gnu: psyclpc: Update comment.
This is a followup to commit eaa45301f4.

* gnu/packages/messaging.scm (psyclpc): Update comment.
2016-11-26 13:36:51 -05:00
ng0 ebfc2ecc3c
gnu: Move content of (gnu packages psyc) into (gnu packages messaging).
* gnu/packages/psyc.scm (perl-net-psyc, libpsyc, psyclpc): Move this ...
* gnu/packages/messaging.scm (perl-net-psyc, libpsyc, psyclpc): ... here.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove psyc.scm.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-26 13:23:46 -05:00
ng0 eaa45301f4
gnu: psyclpc: Upgrade to 20160821-2.61cf9aa.
This makes the package reproducible.

* gnu/packages/psyc.scm (psyclpc): Upgrade to 20160821-2.61cf9aa.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-26 13:23:46 -05:00
Danny Milosavljevic c6c80104ab
gnu: python-flask: Update to 0.11.1.
* gnu/packages/python.scm (python-flask): Update to 0.11.1.
[native-inputs]: Add python-click.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-26 16:35:07 +01:00
Danny Milosavljevic 61684de287
gnu: python-pyopenssl: Update to 16.2.0.
* gnu/packages/python.scm (python-pyopenssl): Update to 16.2.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-26 16:35:07 +01:00
Danny Milosavljevic b2e6e150aa
gnu: python-simplejson: Update to 3.10.0.
* gnu/packages/python.scm (python-simplejson): Update to 3.10.0.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-26 16:35:07 +01:00
ng0 faa29e4bdb
gnu: Add mumble.
* gnu/packages/telephony.scm (mumble): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-26 12:32:22 +01:00
Marius Bakke 4f55441fe3
gnu: transmission: Update to 2.92.
* gnu/packages/bittorrent.scm (transmission): Update to 2.92.
[inputs]: Add cyrus-sasl.
2016-11-26 12:32:01 +01:00
Ben Woodcroft 5e0a0f4226
gnu: roary: Update to 3.7.0.
* gnu/packages/bioinformatics.scm (roary): Update to 3.7.0.
2016-11-26 20:15:39 +10:00
Ben Woodcroft 31a9d653ad
gnu: Add proteinortho.
* gnu/packages/bioinformatics.scm (proteinortho): New variable.
2016-11-26 20:15:37 +10:00
Julien Lepiller d3eff97afd
gnu: Add python-polib.
* gnu/packages/python.scm (python-polib, python2-polib): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-26 10:29:29 +01:00
Marius Bakke 3ad8cb4163
gnu: sqlite: Update to 3.15.1.
* gnu/packages/databases.scm (sqlite): Update to 3.15.1.
[source]: Download from sqlite.org.
[home-page]: Use HTTPS.
(sqlite-3.15.1): Remove.
* gnu/packages/php.scm (php)[inputs]: Change 'sqlite-3.15.1' to 'sqlite'.
2016-11-26 09:09:17 +01:00
John Darrington fc5dc4e81c
gnu: Whitespace changes
* gnu/services/kerberos.scm: Fold lines to 80 character limit.
2016-11-26 07:37:33 +01:00
Leo Famulari 53d892dd92
gnu: imagemagick: Update to 6.9.6-6 [fixes CVE-2016-9556].
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.6-6.
2016-11-26 00:38:45 -05:00
宋文武 f88371e866
services: Add opensmtpd service.
* gnu/services/mail.scm (<opensmtpd-configuration>): New record type.
(%default-opensmtpd-config-file, %opensmtpd-accounts): New variables.
(opensmtpd-shepherd-service, opensmtpd-activation): New procedures.
(opensmtpd-service-type): New variable.
* doc/guix.texi (Mail Services): Document it.
2016-11-26 12:50:11 +08:00
Leo Famulari 0959478c72
gnu: Add missing module import to (gnu packages ldc).
This is a followup to commit e44b511298.

* gnu/packages/ldc.scm: Import (gnu packages python).
2016-11-25 23:18:29 -05:00
Danny Milosavljevic e44b511298
gnu: ldc: Update to 0.17.2.
* gnu/packages/ldc.scm (ldc): Update to 0.17.2.
* gnu/packages/patches/ldc-disable-tests.patch: Fix timezone file name.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-11-25 23:54:51 +01:00
Ludovic Courtès 6634180f9e
gnu: guile-ssh: Update to 0.10.2.
* gnu/packages/ssh.scm (guile-ssh): Update to 0.10.2.
[home-page]: Update.
[source]: Use the 'url-fetch' method and a GitHub generated
tarball.
[arguments] <autoreconf>: Remove now unneeded 'chmod' call.
2016-11-25 23:44:20 +01:00
Ricardo Wurmus 7276b5604d
gnu: hydrogen: Update to 0.9.7.
* gnu/packages/music.scm (hydrogen): Update to 0.9.7.
2016-11-25 21:44:16 +01:00
Leo Famulari c415f76302
gnu: python-betamax: Fix typo.
* gnu/packages/python.scm (python-betamax): Fix typo.
2016-11-25 11:31:43 -05:00
Leo Famulari de32aa74b4
Merge branch 'master' into python-build-system 2016-11-25 11:20:21 -05:00
Tobias Geerinckx-Rice d66cbd1adc
gnu: btrfs-progs: Update to 4.8.4.
* gnu/packages/linux.scm (btrfs-progs): Update to 4.8.4.
2016-11-25 17:00:51 +01:00
Tobias Geerinckx-Rice fc89cb691d
gnu: lz4: Update to 1.7.4.2.
* gnu/packages/compression.scm (lz4): Update to 1.7.4.2.
2016-11-25 16:31:20 +01:00
Tobias Geerinckx-Rice dead1067c3
gnu: hplip: Update to 3.16.11.
* gnu/packages/cups.scm (hplip): Update to 3.16.11.
2016-11-25 16:31:10 +01:00
Ricardo Wurmus aaaf8b3844
gnu: qtractor: Update to 0.8.0.
* gnu/packages/music.scm (qtractor): Update to 0.8.0.
2016-11-25 13:08:06 +01:00
Alex Kost 1e34721435
gnu: qemu: Install all required info files.
* gnu/packages/qemu.scm (qemu)[arguments]: Adjust 'install-info' phase
to find all info files (including "*.info-N").
2016-11-25 16:09:22 +03:00
Theodoros Foradis 8f528bd442
gnu: Add kicad-library.
* gnu/packages/engineering.scm (kicad-library): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-25 00:38:11 -05:00
Theodoros Foradis befc9ff643
gnu: Add kicad.
* gnu/packages/engineering.scm (kicad): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-25 00:38:11 -05:00
Theodoros Foradis b353c7d201
gnu: Add python2-wxpython.
* gnu/packages/wxwidgets.scm (python2-wxpython): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-25 00:38:10 -05:00
Theodoros Foradis 2cd3b6fd03
gnu: Add wxwidgets-gtk2.
* gnu/packages/wxwidgets.scm (wxwidgets-gtk2): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-25 00:38:10 -05:00
Leo Famulari 88d45b74c1
gnu: nginx: Update to 1.11.6.
* gnu/packages/web.scm (nginx): Update to 1.11.6.
[arguments]: Remove the obsolete option --with-ipv6 from #:configure-flags.
2016-11-25 00:07:40 -05:00
Tobias Geerinckx-Rice e0f8a520ed
gnu: miniupnpc: Improve synopsis and description.
* gnu/packages/upnp.scm (miniupnp)[synopsis, description]: Edit, fix typos,
add some relevant (search) terms from the home page, and expand acronyms.
2016-11-25 02:21:51 +01:00
Tobias Geerinckx-Rice 5af82630fe
gnu: miniupnpc: Use the correct ‘upnpc’ in ‘external-ip’.
* gnu/packages/upnp.scm (miniupnpc)[arguments]: Add ‘qualify-paths’ phase.
2016-11-25 02:21:51 +01:00
Tobias Geerinckx-Rice cdbdaf7b6b
gnu: miniupnpc: Use ‘modify-phases’ syntax.
* gnu/packages/upnp.scm (miniupnpc)[arguments]: Use ‘modify-phases’.
2016-11-25 02:21:50 +01:00
Tobias Geerinckx-Rice 2d3b0203f4
gnu: miniupnpc: Update to 2.0.
* gnu/packages/upnp.scm (miniupnpc): Update to 2.0.
2016-11-25 02:21:50 +01:00
Tobias Geerinckx-Rice ade5848576
gnu: vim: Update to 8.0.0101.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0101.
2016-11-25 02:21:49 +01:00
Ludovic Courtès 13fb1bd94e
doc: Document encrypted root partitions.
This is a followup to f7f292d359.

* doc/guix.texi (Preparing for Installation): Give commands for
encrypted root installation.
(Proceeding with the Installation): Add item about mapped devices.
(File Systems): Mention that 'dependencies' can list <mapped-device>
objects.
* gnu/system/examples/desktop.tmpl (mapped-devices): New field.
(file-systems): Add 'dependencies' field.
2016-11-24 23:20:41 +01:00
Ludovic Courtès 030f59fac9
services: network-manager: Depend on 'wpa-supplicant'.
Suggested by Chris Marusich <cmmarusich@gmail.com>.

* gnu/services/networking.scm (network-manager-shepherd-service)
[requirement]: Add 'wpa-supplicant'.
2016-11-24 21:43:48 +01:00
Ludovic Courtès 89007a0bb7
services: network-manager: Install polkit actions.
Reported by Chris Marusich <cmmarusich@gmail.com>
at <https://lists.gnu.org/archive/html/help-guix/2016-11/msg00038.html>.

* gnu/services/networking.scm (network-manager-service-type)[extensions]:
Add POLKIT-SERVICE-TYPE.
2016-11-24 21:43:47 +01:00
Ludovic Courtès 2e32869824
services: Move polkit to (gnu services dbus).
* gnu/services/desktop.scm (<polkit-configuration>, %polkit-accounts)
(%polkit-pam-services, polkit-directory, polkit-etc-files)
(polkit-setuid-programs, polkit-service-type, polkit-service): Move
to...
* gnu/services/dbus.scm: ... here.
2016-11-24 21:43:47 +01:00
Ludovic Courtès 62126576fc
gnu: hdf5: Build the C++ interface.
* gnu/packages/maths.scm (hdf5)[arguments]: Add #:configure-flags.
2016-11-24 21:43:47 +01:00
Tobias Geerinckx-Rice 6f09c100d9
gnu: vim: Update to 8.0.0096.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0096.
2016-11-24 16:57:22 +01:00
Tobias Geerinckx-Rice c50f2af9f8
gnu: ir: Use archived tarball and home page.
* gnu/packages/audio.scm (ir)[source]: Use a list of archive mirrors.
[home-page]: Link to an Internet Archive snapshot.
2016-11-24 06:34:37 +01:00
Tobias Geerinckx-Rice 2df984f278
gnu: ir: Use ‘modify-phases’ syntax.
* gnu/packages/audio.scm (ir)[arguments]: Use ‘modify-phases’.
2016-11-24 06:34:37 +01:00
Leo Famulari c8d1e7a130
gnu: libgc-7.2: Remove package.
This package variant was unused.

* gnu/packages/bdw-gc.scm (libgc-7.2): Delete variable.
2016-11-23 23:11:30 -05:00
Leo Famulari 0bd1097c50
gnu: libtiff: Update to 4.0.7.
* gnu/packages/image.scm (libtiff): Update to 4.0.7.
[source]: Update URL and remove obsolete patches.
[home-page]: Update URL.
[native-inputs]: Add gcc-5.
(libtiff-4.0.7): Delete variable.
* gnu/packages/patches/libtiff-CVE-2015-8665+CVE-2015-8683.patch,
gnu/packages/patches/libtiff-CVE-2016-3623.patch,
gnu/packages/patches/libtiff-CVE-2016-3945.patch,
gnu/packages/patches/libtiff-CVE-2016-3990.patch,
gnu/packages/patches/libtiff-CVE-2016-3991.patch,
gnu/packages/patches/libtiff-CVE-2016-5314.patch,
gnu/packages/patches/libtiff-CVE-2016-5321.patch,
gnu/packages/patches/libtiff-CVE-2016-5323.patch,
gnu/packages/patches/libtiff-oob-accesses-in-decode.patch,
gnu/packages/patches/libtiff-oob-write-in-nextdecode.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2016-11-23 22:53:43 -05:00
Leo Famulari 2ac7d54616
Merge branch 'master' into staging 2016-11-23 22:24:52 -05:00
Ludovic Courtès cc73339b97
tests: Remove 'GUIX_LOCPATH' hack that had been added for glibc@2.23.
* gnu/tests/base.scm (run-basic-test)[test]("locale"): Remove
'GUIX_LOCPATH' hack, which is no longer needed since
commit 9f58fe3d1c.
2016-11-23 21:13:18 +01:00
Ludovic Courtès f7f292d359
install: Enable "cryptodisk" handling in GRUB.
This allows 'grub-install' to do the right thing when / or /boot is a
LUKS-encrypted partition.

Fixes <http://bugs.gnu.org/21843>.

* gnu/build/install.scm (install-grub): Add 'setenv' to set
'GRUB_ENABLE_CRYPTODISK'.
(wait-for-screen-text): New test.
* gnu/tests/base.scm (run-basic-test): Add #:initialization parameter
and honor it.
* gnu/tests/install.scm (%encrypted-root-os)[kernel-arguments]: Remove.
(%encrypted-root-installation-script): Pass '--uuid' to 'cryptsetup
luksFormat'.  Remove 'sed' invocation.
(enter-luks-passphrase): New procedure.
(%test-encrypted-os)[value]: Pass #:initialization to 'run-basic-test'.
2016-11-23 21:13:18 +01:00
Ludovic Courtès b7d408ec1b
mapped-devices: Use 'cryptsetup-static' in 'luks-device-mapping'.
* gnu/system/mapped-devices.scm (open-luks-device): Use
CRYPTSETUP-STATIC instead of CRYPTSETUP.  Use 'file-append'.
(close-luks-device): Likewise.
2016-11-23 21:13:18 +01:00
Ludovic Courtès fe93383350
marionette: Add 'marionette-screen-text' using OCR.
* gnu/build/marionette.scm (marionette-screen-text): New procedure.
* gnu/tests/base.scm (run-basic-test)["screen text"]: New test.
2016-11-23 21:13:18 +01:00
Ludovic Courtès f25c9ebc80
marionette: Delay synchronization with the host's REPL.
* gnu/build/marionette.scm (<marionette>)[marionette-repl]: Rename to...
[%marionette-repl]: ... this.
(marionette-repl): New macro.
(make-marionette): Wrap last 'read' call into 'delay', making the last
argument to 'marionette' a promise of a port.
(marionette-eval): Use 'force' in 'match' clause.
2016-11-23 21:13:18 +01:00
Leo Famulari 1c9f78eca1
gnu: python-passlib: Update to 1.7.0.
* gnu/packages/python.scm (python-passlib, python2-passlib): Update to 1.7.0.
2016-11-23 14:38:05 -05:00
Efraim Flashner 262c2d33bc
gnu: perl-digest-md5: Fix typo.
* gnu/packages/perl.scm (perl-digest-md5)[arguments]: Remove extra ')'.
2016-11-23 18:16:53 +02:00
ng0 8a28e717ba
gnu: Add perl-digest-md5.
* gnu/packages/perl.scm (perl-digest-md5): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-23 16:46:47 +01:00
Efraim Flashner bc05caee77
gnu: chez.scm: Add '#:use-module srfi srfi-1'.
This is a follow-up to 1e16648f82.

* gnu/packages/chez.scm: Add '#:use-module srfi srfi-1'.
2016-11-23 12:42:36 +02:00
Efraim Flashner 8553fe5734
gnu: Add aspell-dict-he.
* gnu/packages/aspell.scm (aspell-dict-he): New variable.
2016-11-23 12:38:28 +02:00
Efraim Flashner 1e16648f82
gnu: chez-scheme: Remove support for armhf.
* gnu/packages/chez.scm (chez-scheme)[supported-systems]: Remove
armhf-linux from the list of supported systems.
2016-11-23 12:37:17 +02:00
John Darrington 5ac13f9218
gnu: Update mit-krb5 to version 1.14.4.
* gnu/packages/mit-krb5.scm (mit-krb5): Update to 1.14.4
2016-11-23 07:21:28 +01:00
Leo Famulari c0bb7178be
gnu: libtiff: Update to 4.0.7.
* gnu/packages/image.scm (libtiff): Update to 4.0.7.
[source]: Update URL and remove obsolete patches.
[home-page]: Update URL.
(libtiff-4.0.7): Delete variable.
* gnu/packages/patches/libtiff-CVE-2015-8665+CVE-2015-8683.patch,
gnu/packages/patches/libtiff-CVE-2016-3623.patch,
gnu/packages/patches/libtiff-CVE-2016-3945.patch,
gnu/packages/patches/libtiff-CVE-2016-3990.patch,
gnu/packages/patches/libtiff-CVE-2016-3991.patch,
gnu/packages/patches/libtiff-CVE-2016-5314.patch,
gnu/packages/patches/libtiff-CVE-2016-5321.patch,
gnu/packages/patches/libtiff-CVE-2016-5323.patch,
gnu/packages/patches/libtiff-oob-accesses-in-decode.patch,
gnu/packages/patches/libtiff-oob-write-in-nextdecode.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2016-11-23 00:17:12 -05:00
Leo Famulari de76f0a45b
Merge branch 'master' into core-updates 2016-11-23 00:11:30 -05:00
Mark H Weaver 08b3e4a970
gnu: linux-libre: Update to 4.8.10.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.10.
2016-11-22 21:59:54 -05:00
Mark H Weaver 4263eb4dd0
gnu: linux-libre@4.4: Update to 4.4.34.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.34.
2016-11-22 21:49:39 -05:00
Ludovic Courtès 66ebb5bca3
gnu: guix: Update development snapshot.
* gnu/packages/package-management.scm (guix-devel): Update to 1f410017.
2016-11-23 00:03:18 +01:00
Ludovic Courtès 35b2f18c5f
Revert "gnu: Update mit-krb5 to version 1.14.4."
This reverts commit 2947ff6430, which
would have caused too many rebuilds for 'master'.
2016-11-23 00:03:17 +01:00
Ludovic Courtès ad17470551
marionette: Avoid use of SIGALRM for timeouts.
* gnu/build/marionette.scm (make-marionette)[accept*]: New procedures.
Remove calls to 'sigaction'.  Use 'accept*' instead of 'accept'.
2016-11-22 23:45:08 +01:00
Ludovic Courtès 106b389e52
gnu: Add 'cryptsetup-static'.
* gnu/packages/cryptsetup.scm (static-library): New procedure.
(cryptsetup-static): New variable.
2016-11-22 23:45:01 +01:00
Ludovic Courtès 01f94cca19
gnu: Add 'lvm2-static'.
* gnu/packages/patches/lvm2-static-link.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (lvm2)[source](patches): New field.
(lvm2-static): New variable.
2016-11-22 22:59:31 +01:00
Ludovic Courtès 10da75dff8
gnu: grub: Add dependency on LVM2.
* gnu/packages/grub.scm (grub)[inputs]: Add LVM2.
2016-11-22 22:59:31 +01:00
Christopher Allan Webber 8957af324b
gnu: python-pyld: Update to 0.7.1.
* gnu/packages/python.scm (python-pyld): Update to 0.7.1.
2016-11-22 15:29:33 -06:00
Marius Bakke 61320932ed
gnu: harfbuzz: Update to 1.3.3.
* gnu/packages/gtk.scm (harfbuzz): Update to 1.3.3.
[home-page]: Use HTTPS.
2016-11-22 21:46:59 +01:00
John Darrington 2947ff6430
gnu: Update mit-krb5 to version 1.14.4.
* gnu/packages/mit-krb5.scm (mit-krb5): Update to 1.14.4
2016-11-22 21:27:19 +01:00
Marius Bakke 1f410017ff
gnu: notmuch: Update to 0.23.2.
* gnu/packages/mail.scm (notmuch): Update to 0.23.2.
2016-11-22 20:44:53 +01:00
Marius Bakke 6317d36f3b
gnu: notmuch: Skip tests that fail with gnupg-2.1.16.
* gnu/packages/mail.scm (notmuch)[arguments]: Add environment variable
to skip tests that broke after gnupg-2.1.16.
2016-11-22 20:44:48 +01:00
Leo Famulari be72eb98fa
gnu: libtiff: Update replacement to 4.0.7.
* gnu/packages/image.scm (libtiff)[replacement]: Update to 4.0.7.
(libtiff-4.0.7): New variable. Update home-page and source URLs.
(libtiff/fixed): Delete variable.
* gnu/packages/patches/libtiff-CVE-2016-5652.patch,
gnu/packages/patches/libtiff-CVE-2016-9273.patch,
gnu/packages/patches/libtiff-CVE-2016-9297.patch,
gnu/packages/patches/libtiff-CVE-2016-9448.patch,
gnu/packages/patches/libtiff-uint32-overflow.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2016-11-22 12:30:36 -05:00
Marius Bakke c70047f12d
gnu: freetype: Update to 2.7.
* gnu/packages/fontutils.scm (freetype): Update to 2.7.
[home-page]: Use HTTPS.
2016-11-22 17:50:07 +01:00
Marius Bakke d8e3bb082d
gnu: vim: Update to 8.0.0095.
* gnu/packages/vim.scm (vim, vim-full): Update to 8.0.0095.
2016-11-22 17:33:07 +01:00
Kei Kebreau c3cc7d412a
gnu: Add espeak.
* gnu/packages/audio.scm (espeak): New variable.
2016-11-22 11:24:41 -05:00
Eric Bavier 52db41aff8
gnu: system: Add openfwwf-firmware to %base-firmware.
* gnu/system.scm (%base-firmware): Add openfwwf-firmware.
* doc/guix.texi (Hardware Considerations): Mention b43-open support.
(operating-system Reference)[firmware]: Likewise.
2016-11-22 09:38:36 -06:00
Eric Bavier e36a67c91a
gnu: Add openfwwf-firmware.
* gnu/packages/firmware.scm (b43-tools, openfwwf-firmware): New
variables.
2016-11-22 09:38:36 -06:00
Efraim Flashner 4a5ec78d5f
gnu: w3m: Update to 0.5.3+git20161120 [fixes security issues].
Fixes CVE-2016-9439 and others.

* gnu/packages/w3m.scm (w3m): Update to 0.5.3+git20161120.
2016-11-22 14:00:11 +02:00
Efraim Flashner 83a3e805be
gnu: w3m: Use 'modify-phases' syntax.
* gnu/packages/w3m.scm (w3m)[arguments]: Use 'modify-phases' syntax.
2016-11-22 14:00:11 +02:00
Ben Woodcroft ee7518a009
gnu: ruby: Update replacement to 2.3.3.
* gnu/packages/ruby.scm (ruby)[replacement]: Update to 2.3.3.
(ruby-2.3.2): Replace this ...
(ruby-2.3.3): ... with this.
2016-11-22 21:39:18 +10:00
Ben Woodcroft f4a8081d24
gnu: ruby: Update to 2.3.3.
* gnu/packages/ruby.scm (ruby): Update to 2.3.3.
2016-11-22 21:35:58 +10:00
Ben Woodcroft 8e5f8c98e2
gnu: diamond: Update to 0.8.27.
* gnu/packages/bioinformatics.scm (diamond): Update to 0.8.27.
2016-11-22 21:01:21 +10:00
Ricardo Wurmus 1ea7969fa6
gnu: zynaddsubfx: Update to 3.0.0.
* gnu/packages/music.scm (zynaddsubfx): Update to 3.0.0.
[inputs]: Add "mesa".
2016-11-22 09:47:16 +01:00
Tobias Geerinckx-Rice eec9c4a7c5
gnu: progress: Update to 0.13.1.
* gnu/packages/admin.scm (progress): Update to 0.13.1.
[native-inputs]: Add pkg-config and which.
[arguments]: Drop LDFLAGS (now handled by pkg-config) from #:make-flags.
2016-11-22 01:12:03 +01:00
Tobias Geerinckx-Rice 57742b35dc
gnu: ncurses: Install pkg-config ‘.pc’ files.
* gnu/packages/ncurses.scm (ncurses)[arguments]: Add ‘--enable-pc-files’
and ‘--with-pkg-config-libdir=’ to #:configure-flags. Create ‘non-wide’
compatibility symbolic links for ‘.pc’ files in the post-install-phase.
[native-inputs]: Add pkg-config.
2016-11-22 01:12:02 +01:00
Efraim Flashner dd3f8fe660
gnu: connman: Update to 1.33.
* gnu/packages/connman.scm (connman): Update to 1.33.
2016-11-21 23:52:19 +02:00
Petter 6e388b0839
gnu: openssl: Remove redundant use of mkdir-p.
* gnu/packages/tls.scm (openssl)[arguments]: Remove redundant (mkdir-p).

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-21 14:41:28 -05:00
Petter daf72603eb
gnu: Remove redundancy where mkdir-p <dir> is followed by install-file <file> <dir>.
* gnu/packages/bioinformatics.scm (bwa)[arguments]: Remove redundant mkdir-p.
(eigensoft)[arguments]: Likewise.
(snap-aligner)[arguments]: Likewise.
(pardre)[arguments]: Likewise.
(piranha)[arguments]: Likewise.
* gnu/packages/maths.scm (hypre)[arguments]: Likewise.
* gnu/packages/mp3.scm (mpc123)[arguments]: Likewise.
* gnu/packages/music.scm (tuxguitar)[arguments]: Likewise.
* gnu/packages/pdf.scm (impressive)[arguments]: Likewise.
* gnu/packages/qemu.scm (qemu)[arguments]: Likewise.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-21 14:39:54 -05:00
Leo Famulari 4b269baf44
gnu: libgc: Update to 7.6.0.
* gnu/packages/bdw-gc.scm (libgc): Update to 7.6.0.
2016-11-21 14:24:29 -05:00
Leo Famulari a8ce976fe6
gnu: libgc-7.2: Update to 7.2g.
* gnu/packages/bdw-gc.scm (libgc-7.2): Update to 7.2g.
2016-11-21 14:24:28 -05:00
Leo Famulari a373c68588
gnu: libatomic-ops: Update to 7.4.4.
* gnu/packages/bdw-gc.scm (libatomic-ops): Update to 7.4.4.
2016-11-21 14:17:29 -05:00
Alex Kost 7c90d0f40e
gnu: packages: Use gettext-minimal.
* gnu/packages/crypto.scm (tomb): Use 'gettext-minimal' instead of
'gnu-gettext'.
* gnu/packages/emacs.scm (m17n-db): Likewise.
* gnu/packages/ftp.scm (weex): Likewise.
* gnu/packages/games.scm (chromium-bsu): Likewise.
* gnu/packages/image.scm (steghide): Likewise.
* gnu/packages/linux.scm (radeontop): Likewise.
* gnu/packages/mpd.scm (sonata): Likewise.
* gnu/packages/networking.scm (whois): Likewise.
* gnu/packages/package-management.scm (guix-0.11.0): Likewise.
* gnu/packages/psyc.scm (psyclpc): Likewise.
* gnu/packages/syndication.scm (newsbeuter): Likewise.
* gnu/packages/vim.scm (vim-full): Likewise.
2016-11-21 19:47:30 +03:00
Hartmut Goebel 856f30b000
gnu: shared-mime-info: Update to 1.7
* gnu/packages/gnome.scm (shared-mime-info): Update to 1.7.
2016-11-21 17:17:11 +01:00
Leo Famulari dc6d1b9609
gnu: libtiff: Fix URL in 'libtiff-uint32-overflow.patch'.
* gnu/packages/patches/libtiff-uint32-overflow.patch: Fix URL.
2016-11-21 11:16:37 -05:00
Leo Famulari 6305b81fed
gnu: swig: Update to 3.0.10.
* gnu/packages/swig.scm (swig): Update to 3.0.10.
2016-11-21 11:10:06 -05:00
Ludovic Courtès c9eae83ffa
gnu: dico: Update to 2.4.
* gnu/packages/dico.scm (dico): Update to 2.4.
[source]: Remove 'snippet'.
2016-11-21 15:25:38 +01:00
Ludovic Courtès b3131e2318
services: static-networking: Remove unused parameter.
This is a followup to e48fcd7b8d.

* gnu/services/networking.scm (static-networking-service): Remove #:net-tools.
(static-networking-service-type): Remove outdated comment.
2016-11-21 15:25:38 +01:00
ng0 e01e2c6c52
gnu: services: Add git-service.
* gnu/services/version-control.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Misellaneous Services)[Version Control]: New section.

Co-authored-by: 宋文武 <iyzsong@member.fsf.org>
2016-11-21 20:37:43 +08:00
Ricardo Wurmus 2316078a4e
gnu: Add emacs-emms-mode-line-cycle.
* gnu/packages/emacs.scm (emacs-emms-mode-line-cycle): New variable.
2016-11-21 11:52:26 +01:00
Efraim Flashner 83b294b6d6
gnu: opusfile: Update to 0.8.
* gnu/packages/xiph.scm (opusfile): Update to 0.8.
2016-11-21 10:49:45 +02:00
Efraim Flashner b1e25b08f2
gnu: obs: Update to 0.16.6.
* gnu/packages/video.scm (obs): Update to 0.16.6.
2016-11-21 07:14:05 +02:00
Efraim Flashner 89a30625b9
gnu: mpv: Update to 0.22.0.
* gnu/packages/video.scm (mpv): Update to 0.22.0.
2016-11-21 06:57:16 +02:00
Efraim Flashner 7ceee88c43
gnu: chez-scheme: Properly identify system architecture.
* gnu/packages/chez.dcm (chez-scheme)[arguments]: Substitute `uname -m'
for `uname -a' in configure, allowing proper identification of the
machine architecture.
2016-11-21 06:57:16 +02:00
Ludovic Courtès e48fcd7b8d
services: static-networking: Avoid use of net-tools.
* gnu/services/networking.scm (<static-networking>)[net-tools]: Remove.
(static-networking-service-type): Use 'add-network-route/gateway' and
'delete-network-route' instead of NET-TOOLS.
(static-networking-service): Adjust accordingly.
2016-11-21 00:34:49 +01:00
Julien Lepiller 1845c2a436
gnu: Add php.
* gnu/packages/php.scm: New file.
* gnu/packages/patches/gd-fix-chunk-size-on-boundaries.patch: New file.
* gnu/packages/patches/gd-fix-truecolor-format-correction.patch: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add php.
(dist_patch_DATA): Add gd patches.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
2016-11-20 17:54:14 +01:00
Marius Bakke b28a33512f
gnu: Add sqlite-3.15.1.
* gnu/packages/databases.scm (sqlite-3.15.1): New variable.
2016-11-20 17:46:32 +01:00
Nicolas Goaziou 43ffe220c8
gnu: lilypond: Update to 2.19.51.
* gnu/packages/music.scm (lilypond): Update to 2.19.51.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-20 17:46:21 +01:00
Leo Famulari 25291aca74
gnu: python-icalendar: Update to 3.11.
* gnu/packages/python.scm (python-icalendar): Update to 3.11.
2016-11-20 11:22:27 -05:00
Ben J Woodcroft 66b1bac355
gnu: ruby: Update to 2.3.2.
* gnu/packages/ruby.scm (ruby): Update to 2.3.2.
[replacement]: Remove field.
[origin]: Remove patch.
* gnu/packages/patches/ruby-symlinkfix.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2016-11-20 15:50:10 +10:00
Leo Famulari 764c566221
gnu: gnupg: Update to 2.1.16.
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.16.
[arguments]: Remove obsolete substitution from 'patch-paths' phase.
Remove 'set-home' phase. Add 'set-gnupg-home' phase.
2016-11-19 23:43:32 -05:00
宋文武 9fff9e6484
gnu: gtk-engines: Don't propagate GTK+.
* gnu/packages/gtk.scm (gtk-engines): Move gtk+ to 'inputs'.
2016-11-20 12:02:04 +08:00
Mark H Weaver 5a1ef07d3e
gnu: linux-libre: Update to 4.8.9.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.9.
2016-11-19 22:29:38 -05:00
Mark H Weaver 13172f0d79
gnu: linux-libre@4.4: Update to 4.4.33.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.33.
2016-11-19 22:28:07 -05:00
Ben Woodcroft 9b62c5a8fb
gnu: ruby: Replace with ruby-2.3.2 [fixes CVE-2015-3900].
* gnu/packages/ruby.scm (ruby)[replacement]: New field.
(ruby-2.3.2): New variable.
2016-11-20 11:38:12 +10:00
Ludovic Courtès 966a543b36
gnu: Use 'mirror://' URLs in several places.
* gnu/packages/emacs.scm (m17n-lib)[source]: Use 'mirror://'.
* gnu/packages/games.scm (extremetuxracer)[source]: Likewise.
* gnu/packages/gcc.scm (%gcc-infrastructure): Likewise.
* gnu/packages/gtk.scm (python2-pygtk)[source]: Likewise.
* gnu/packages/perl.scm (perl)[source]: Likewise.
* gnu/packages/telephony.scm (exosip)[source]: Likewise.
* gnu/packages/wm.scm (xmonad)[source]: Likewise.
(ghc-xmonad-contrib)[source]: Likewise.
2016-11-19 18:44:54 +01:00
Ludovic Courtès 6129dd8b59
vm: Disable initrd-time QEMU networking for VM images.
Fixes <http://bugs.gnu.org/24943>.
Reported by dian_cecht@zoho.com.

* gnu/system/vm.scm (system-qemu-image)[initrd]: Remove
 #:qemu-networking? #t.
(virtualized-operating-system): Likewise
2016-11-19 18:44:54 +01:00
Ricardo Wurmus 18675264c6
gnu: Add samplv1.
* gnu/packages/music.scm (samplv1): New variable.
2016-11-19 17:54:50 +01:00
Ricardo Wurmus cf9af706fb
gnu: Add drumkv1.
* gnu/packages/music.scm (drumkv1): New variable.
2016-11-19 17:54:50 +01:00
Leo Famulari d3d2167728
gnu: libgpg-error: Update to 1.25.
* gnu/packages/gnupg.scm (libgpg-error): Update to 1.25.
2016-11-19 11:54:40 -05:00
Leo Famulari 2fedcd1895
gnu: libtiff: Fix CVE-2016-9448.
* gnu/packages/patches/libtiff-CVE-2016-9448.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
2016-11-19 11:31:00 -05:00
Leo Famulari b7e0f65b40
gnu: imagemagick: Update to 6.9.6-5.
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.6-5.
2016-11-19 10:48:51 -05:00
Rene Saavedra 3446ffb57c
gnu: gnome-control-center: Add gdk-pixbuf input.
* gnu/packages/gnome.scm (gnome-control-center)[inputs]: Add gdk-pixbuf.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-19 10:38:01 -05:00
ng0 8f49395064
gnu: Add emacs-danneskjold-theme.
* gnu/packages/emacs.scm (emacs-danneskjold-theme): New variable.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-11-19 21:31:20 +08:00
ng0 5cd4129221
gnu: emacs-cyberpunk-theme: Update to 1.18.
* gnu/packages/emacs.scm (emacs-cyberpunk-theme): Update to 1.18.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-11-19 20:19:03 +08:00
Nicolas Goaziou fd057b84ec
gnu: emacs-org: Update to 20161118.
* gnu/packages/emacs.scm (emacs-org): Update to 20161118.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-11-19 20:09:50 +08:00
宋文武 e5aade794a
services: dicod-service: Honor 'dicod-configuration-dico'.
* gnu/services/dict.scm (dicod-shepherd-service): Use
'dicod-configuration-dico' of config.
2016-11-19 19:37:30 +08:00
宋文武 ae1e2133b9
gnu: opensmtpd: Correct CA certificates file path.
* gnu/packages/mail.scm (opensmtpd)[arguments]: Pass
'--with-path-CAfile=/etc/ssl/certs/ca-certificates.crt' to #:configure-flags.
2016-11-19 19:19:16 +08:00
Ricardo Wurmus cfcef2c2ac
gnu: gx-switchless-wah-lv2: Update to 0-2.7b0869120.
* gnu/packages/music.scm (gx-switchless-wah-lv2): Update to
0-2.7b0869120.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:16 +01:00
Ricardo Wurmus 8e6f6503f0
gnu: gx-slow-gear-lv2: Update to 0-2.cb852e042.
* gnu/packages/music.scm (gx-slow-gear-lv2): Update to 0-2.cb852e042.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:16 +01:00
Ricardo Wurmus a7cd2d44e1
gnu: gx-vintage-fuzz-master-lv2: Update to 0-2.0fec0bc1e.
* gnu/packages/music.scm (gx-vintage-fuzz-master-lv2): Update to
0-2.0fec0bc1e.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:16 +01:00
Ricardo Wurmus 1df4d85f8b
gnu: gx-super-fuzz-lv2: Update to 0-2.f40389575.
* gnu/packages/music.scm (gx-super-fuzz-lv2): Update to 0-2.f40389575.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:16 +01:00
Ricardo Wurmus c1802b0834
gnu: gx-voodoo-fuzz-lv2: Update to 0-2.aec7889b4.
* gnu/packages/music.scm (gx-voodoo-fuzz-lv2): Update to 0-2.aec7889b4.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:15 +01:00
Ricardo Wurmus dad6cb50da
gnu: gx-hyperion-lv2: Update to 0-2.6a096a664.
* gnu/packages/music.scm (gx-hyperion-lv2): Update to 0-2.6a096a664.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:15 +01:00
Ricardo Wurmus 31de5e2244
gnu: gx-saturator-lv2: Update to 0-2.0b581ac85.
* gnu/packages/music.scm (gx-saturator-lv2): Update to 0-2.0b581ac85.
[arguments]: Remove "escape-shell-commands" phase.
2016-11-19 11:26:15 +01:00
Ricardo Wurmus 4ed4bb11cb
gnu: qsynth: Update to 0.4.3.
* gnu/packages/audio.scm (qsynth): Update to 0.4.3.
2016-11-19 11:26:15 +01:00
Ricardo Wurmus f2bd238bcd
gnu: synthv1: Update to 0.8.0.
* gnu/packages/music.scm (synthv1): Update to 0.8.0.
2016-11-19 11:26:15 +01:00
Nicolas Goaziou 2c453091e4
gnu: wireshark: Update to 2.2.2.
* gnu/packages/networking.scm (wireshark): Update to 2.2.2.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-11-19 16:33:55 +08:00
Nicolas Goaziou ce53f5cbf0
gnu: giac-xcas: Update to 1.2.2-103
* gnu/packages/algebra.scm (giac-xcas): Update to 1.2.2-103.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
2016-11-19 16:28:58 +08:00
Muriithi Frederick Muriuki 6689c636d0
gnu: Add ruby-net-http-digest-auth.
* gnu/packages/ruby.scm (ruby-net-http-digest-auth): New variable.
2016-11-19 15:16:19 +10:00
Ben J Woodcroft 4af80275a8
gnu: ruby-2.2: Update to 2.2.6.
* gnu/packages/ruby.scm (ruby-2.2): Update to 2.2.6.
2016-11-19 07:48:01 +10:00
ng0 175d626478
gnu: mps-youtube: Disable tests.
* gnu/packages/video.scm (mps-youtube): Disable tests.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-18 15:16:48 -05:00
ng0 ed3fee5f7b
gnu: python-pafy: Disable tests.
* gnu/packages/python.scm (python-pafy): Disable tests.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-18 15:16:48 -05:00
Petter 01278f16a9
gnu: Add xcalib.
* gnu/packages/xdisorg (xcalib): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
2016-11-18 15:05:59 -05:00
Ludovic Courtès c2662820f3
gnu: emacs-org: Update to 20161102.
* gnu/packages/emacs.scm (emacs-org)[source]: Switch to elpa.gnu.org so
'guix refresh' can pick it up.  Update to 20161102.
2016-11-18 18:28:03 +01:00
Ludovic Courtès 8134dc1f74
gnu: guile@2.0.13: Fix non-determinism issue in REPL server test.
* gnu/packages/patches/guile-repl-server-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/guile.scm (guile-2.0.13)[source]: Use it.
2016-11-18 18:28:02 +01:00
Danny Milosavljevic 651049789f
gnu: xonsh: Update to 0.4.7.
* gnu/packages/shells.scm (xonsh): Update to 0.4.7.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-18 17:02:30 +01:00
宋文武 d7da76044b
gnu: opensmtpd: Build man pages.
* gnu/packages/mail.scm (opensmtpd)[native-inputs]: Add groff.
2016-11-18 22:19:49 +08:00
Efraim Flashner 4d17fe2ad3
gnu: python-gst: Update to 1.10.1.
* gnu/packages/gstreamer.scm (python-gst, python2-gst): Update to 1.10.1.
2016-11-18 14:26:40 +02:00
Efraim Flashner 950548b0f7
gnu: gst-libav: Update to 1.10.1.
* gnu/packages/gstreamer.scm (gst-libav): Update to 1.10.1.
2016-11-18 14:26:40 +02:00
Efraim Flashner 2e747a3ff6
gnu: gst-plugins-ugly: Update to 1.10.1.
* gnu/packages/gstreamer.scm (gst-plugins-ugly): Update to 1.10.1.
2016-11-18 14:26:39 +02:00
Efraim Flashner 95e89a4510
gnu: gst-plugins-bad: Update to 1.10.1 (Fixes security issues).
* gnu/packages/gstreamer.scm (gst-plugins-bad): Update to 1.10.1.
2016-11-18 14:26:39 +02:00
Efraim Flashner faa3c13920
gnu: gst-plugins-good: Update to 1.10.1.
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.10.1.
2016-11-18 10:01:29 +02:00
Efraim Flashner de0e591a53
gnu: gst-plugins-base: Update to 1.10.1.
* gnu/packages/gstreamer.scm (gst-plugins-base): Update to 1.10.1.
2016-11-18 10:01:29 +02:00
Efraim Flashner 28e3663134
gnu: gstreamer: Update to 1.10.1.
* gnu/packages/gstreamer.scm (gstreamer): Update to 1.10.1.
2016-11-18 10:01:17 +02:00
Ludovic Courtès 1f9803c2a4
services: static-networking: Add netmask.
Reported by Mathieu Lirzin and Andreas Enge.

* gnu/services/networking.scm (<static-networking>)[netmask]: New
field.
(static-networking-service-type): Honor it.
* gnu/services/networking.scm (static-networking-service): Add #:netmask
and honor it.
* doc/guix.texi (Networking Services): Adjust accordingly.
2016-11-17 23:21:48 +01:00
Ludovic Courtès 056d0b4034
tests: basic: Fix harmless thinko.
* gnu/tests/base.scm (run-basic-test)["login on tty1"]: Move the
file-waiting loop inside the 'marionette-eval' body.  Before that, we
were waiting for the file to appear on the host, which would never
happen, meaning that we were always waiting for 15 seconds.
2016-11-17 23:21:48 +01:00
Leo Famulari 175c910380
gnu: mpop: Use 'sourceforge' mirror.
This is a followup to commit 5837e69936.

* gnu/packages/mail.scm (mpop)[source]: Use 'sourceforge' mirror.
2016-11-17 15:56:06 -05:00
Arun Isaac 5837e69936
gnu: mpop: Update to 1.2.6.
* gnu/packages/mail.scm (mpop): Update to 1.2.6.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2016-11-17 17:45:38 +01:00
Efraim Flashner e5294500d6
gnu: obs: Update to 0.16.5.
* gnu/packages/video.scm (obs): Update to 0.16.5.
2016-11-17 07:26:20 +02:00
Efraim Flashner ca569eb89f
gnu: aria2: Update to 1.29.0.
* gnu/packages/bittorrent.scm (aria2): Update to 1.29.0.
2016-11-17 07:26:20 +02:00
Mark H Weaver 2f63e087fe
Revert "gnu: icecat: Enable gtk3 support."
This reverts commit eaf72e218e.

IceCat misbehaves with gtk+3, most notably the scroll bar handles are
invisible.  Here we revert back to gtk+2 until these problems can be
addressed.
2016-11-16 22:34:11 -05:00
Eric Bavier fe047e1380
gnu: Add Handbrake.
* gnu/packages/video.scm (handbrake): New variable.
* gnu/packages/patches/handbrake-pkg-config-path.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-11-16 20:58:12 -06:00
Leo Famulari 1339a8ed1c
gnu: libtiff: Fix some buffer overflows.
* gnu/packages/patches/libtiff-uint32-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
2016-11-16 19:59:28 -05:00
Leo Famulari 7cea56e2ac
gnu: libtiff: Fix CVE-2016-9297.
* gnu/packages/patches/libtiff-CVE-2016-9297.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
2016-11-16 19:59:24 -05:00
Efraim Flashner d87c201f96
gnu: jasper: Update to 1.900.29.
* gnu/packages/image.scm (jasper): Update to 1.900.29.
[inputs]: Add libjpeg.
2016-11-16 22:06:33 +02:00
Mark H Weaver 9cdb405b81
gnu: icecat: Remove unneeded patch.
This is a followup to commit 1a87aa7567.

* gnu/packages/gnuzilla.scm (icecat)[sources][patches]: Remove patch for
CVE-2016-5296, which is for a bundled copy of pixman that is
subsequently deleted by a snippet.
2016-11-16 14:14:25 -05:00
John Darrington d9804e5011
gnu: util-linux: Add current system profile to fs search path.
* gnu/packages/linux.scm (util-linux)[arguments]: Add
"--enable-fs-paths-default=/run/current-system/profile/sbin"
to configure-flags.
2016-11-16 20:13:41 +01:00
Marius Bakke d3e5dc0a44
gnu: perl-dbd-mysql: Update to 4.039 [Fixes CVE-2016-1249].
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.039.
[source]: Update CPAN URI.
2016-11-16 18:33:57 +00:00
Leo Famulari 1d87fdf531
gnu: ncmpcpp: Update to 0.7.7.
* gnu/packages/mpd.scm (ncmpcpp): Update to 0.7.7.
2016-11-16 13:09:36 -05:00
Leo Famulari 0ffa8b8e7b
gnu: shotwell: Update to 0.25.0.1.
* gnu/packages/gnome.scm (shotwell): Update to 0.25.0.1.
2016-11-16 13:09:36 -05:00
Mark H Weaver 1a87aa7567
gnu: icecat: Add fixes from Firefox ESR 45.5.0.
Includes fixes for CVE-2016-5290, CVE-2016-5291, CVE-2016-5297, CVE-2016-9064,
and CVE-2016-9066.

* gnu/packages/gnuzilla.scm (icecat)[source][patches]: Add fixes for
aforementioned CVEs and other selected fixes from Firefox ESR 45.5.0.  Note
that the first six patches of CVE-2016-5290 and the patch for CVE-2016-9066
were already present, but were labeled by mozilla bug number instead of CVE.
* gnu/packages/patches/icecat-CVE-2016-9064.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2016-11-16 13:04:02 -05:00
Mark H Weaver 56ac2bf442
gnu: pixman: Add fix for CVE-2016-5296.
* gnu/packages/patches/pixman-CVE-2016-5296.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xdisorg.scm (pixman)[replacement]: New field.
(pixman/fixed): New variable.
2016-11-16 13:03:56 -05:00
宋文武 eb4b3e4bef
gnu: opensmtpd: Update to 6.0.2p1.
* gnu/packages/mail.scm (opensmtpd): Update to 6.0.2p1.
[arguments]: Pass '--with-path-sock=/var/run' to #:configure-flags.
2016-11-16 21:00:40 +08:00
Mark H Weaver d55019136e
gnu: linux-libre: Update to 4.8.8.
* gnu/packages/linux.scm (%linux-libre-version, %linux-libre-hash)
(linux-libre): Update to 4.8.8.
2016-11-16 00:08:19 -05:00
Mark H Weaver 7d154949c9
gnu: linux-libre@4.4: Update to 4.4.32.
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.32.
2016-11-16 00:06:46 -05:00
Hartmut Goebel d46491779e
gnu: python-awscli: fix inputs.
* gnu/packages/python.scm (python-awscli): [inputs] change to
  [native-inputs].
2016-11-15 22:36:22 +01:00
Hartmut Goebel 8fa6890b6c
gnu: python-botocore: fix inputs.
* gnu/packages/python.scm (python-botocore): [inputs] change to
  [native-inputs].
2016-11-15 22:36:21 +01:00
Hartmut Goebel 05e2e4cf00
gnu: python-pip: fix inputs.
* gnu/packages/python.scm (python-pip): [inputs] change to
  [native-inputs].
2016-11-15 22:36:21 +01:00
Hartmut Goebel e62600feb6
gnu: python2-ipython: fix inputs.
* gnu/packages/python.scm (python2-ipython): [inputs] change to
  [native-inputs].
2016-11-15 22:36:20 +01:00