Efraim Flashner
a916c82649
gnu: man-pages: Update to 4.04.
...
* gnu/packages/man.scm (man-pages): Update to 4.04.
[source]: Add alternate location.
2016-01-11 09:37:50 +02:00
Ben Woodcroft
9b9b7ffd8e
gnu: bedtools: Update to 2.25.0.
...
* gnu/packages/bioinformatics.scm (bedtools): Update to 0.25.0.
[source]: Remove patch merged upstream.
[arguments]: Use 'modify-phases'. Remove
'patch-makefile-SHELL-definition' phase.
* gnu/packages/patches/bedtools-32bit-compilation.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
2016-01-11 00:36:13 +10:00
Ben Woodcroft
6573ac82ad
gnu: bedtools: Use modify-phases.
...
* gnu/packages/bioinformatics.scm (bedtools)[arguments]: Use modify-phases.
2016-01-11 00:36:13 +10:00
Ben Woodcroft
048036aee5
gnu: ruby-yard: Disable failing test.
...
* gnu/packages/ruby.scm (ruby-yard)[arguments]: Disable test which fails on
Ruby 2.3.0.
2016-01-10 21:10:29 +10:00
Ben Woodcroft
3918146b61
gnu: ruby-power-assert: Update to 0.2.7.
...
* gnu/packages/ruby.scm (ruby-power-assert): Update to 0.2.7.
2016-01-10 21:09:37 +10:00
Andreas Enge
695bea9803
gnu: r: Update to 3.2.3.
...
* gnu/packages/statistics.scm (r): Update to 3.2.3.
2016-01-09 23:18:28 +01:00
Andreas Enge
13035f5a03
gnu: icecat: Update to 38.5.2-gnu1.
...
* gnu/packages/gnuzilla.scm (icecat): Update to 38.5.2-gnu1.
2016-01-09 22:51:28 +01:00
Ben Woodcroft
4c40fa0229
gnu: ruby-2.1: Update to 2.1.8.
...
* gnu/packages/ruby.scm (ruby-2.1): Update to 2.1.8.
2016-01-09 14:53:58 +10:00
Leo Famulari
f32274a71e
gnu: i2c-tools: Update source and home-page URLs.
...
* gnu/packages/linux.scm (i2c-tools)[source]: Update URL.
[home-page]: Update URL.
2016-01-08 16:42:27 -05:00
Leo Famulari
3a04d5d4e4
gnu: lm-sensors: Update source and home-page URLs.
...
* gnu/packages/linux.scm (lm-sensors)[source]: Update URL.
[home-page]: Update URL.
2016-01-08 16:42:27 -05:00
Mark H Weaver
bea25ae83c
gnu: nss: Update to 3.21 [fixes CVE-2015-7575].
...
* gnu/packages/gnuzilla.scm (nss): Update to 3.21.
[arguments]: In configure phase, setenv CC=gcc.
* gnu/packages/patches/nss-pkgconfig.patch: Adapt to NSS 3.21.
2016-01-08 15:29:50 -05:00
Ludovic Courtès
195f557ed5
gnu: attr: Update to 2.4.47.
...
* gnu/packages/attr.scm (attr): Update to 2.4.47.
2016-01-08 16:45:32 +01:00
Ludovic Courtès
20c620d0a4
gnu: attr: Use 'modify-phases'.
...
* gnu/packages/attr.scm (attr)[arguments]: Use 'modify-phases'.
2016-01-08 16:45:28 +01:00
Mathieu Lirzin
2409f37f28
gnu: Add missing (gnu packages gcc) import.
...
* gnu/packages/bioinformatics.scm: Use (gnu packages gcc). This is
required by 'r-impute' for 'gfortran'.
2016-01-08 14:18:46 +01:00
Mathieu Lirzin
9ef824c10e
gnu: xterm: Update to 322.
...
* gnu/packages/xorg.scm (xterm): Update to 322.
2016-01-08 14:12:29 +01:00
宋文武
a65e26f091
gnu: epiphany: Update to 3.18.2.
...
* gnu/packages/gnome.scm (epiphany): Update to 3.18.2.
2016-01-08 17:34:08 +08:00
宋文武
19e5258d84
gnu: webkitgtk: Update to 2.10.4.
...
* gnu/packages/webkit.scm (webkitgtk): Update to 2.10.4.
2016-01-08 17:34:08 +08:00
Efraim Flashner
209e09fa10
gnu: zlib: Update to 1.2.8.
...
* gnu/packages/compression.scm (zlib): Update to 1.2.8.
2016-01-08 06:39:12 +02:00
Pjotr Prins
c8d969b58f
gnu: Add Pfff.
...
* gnu/packages/textutils.scm (pfff): New variable.
2016-01-07 21:13:35 +01:00
Alex Kost
fbbaa4dde8
gnu: mpv: Remove 'samba' input.
...
This is a heavy-weight and uncommon feature. See
<http://lists.gnu.org/archive/html/guix-devel/2015-12/msg00701.html >.
* gnu/packages/video.scm (mpv)[inputs]: Remove 'samba'.
2016-01-07 22:30:18 +03:00
Ricardo Wurmus
cb933df6da
gnu: Add genomation.
...
* gnu/packages/bioinformatics.scm (r-genomation): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
03ea5a357e
gnu: Add seqPattern.
...
* gnu/packages/bioinformatics.scm (r-seqpattern): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
c43a011de3
gnu: Add impute.
...
* gnu/packages/bioinformatics.scm (r-impute): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
c63cef6699
gnu: Add BSgenome.
...
* gnu/packages/bioinformatics.scm (r-bsgenome): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
fbf6045e33
gnu: Add plotly.
...
* gnu/packages/statistics.scm (r-plotly): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
a28d646b63
gnu: Add viridis.
...
* gnu/packages/statistics.scm (r-viridis): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
d547ce5e70
gnu: Add topGO.
...
* gnu/packages/bioinformatics.scm (r-topgo): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
e05c37da4a
gnu: Add matrixStats.
...
* gnu/packages/statistics.scm (r-matrixstats): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
3703ffb41f
gnu: Add R.rsp.
...
* gnu/packages/statistics.scm (r-r-rsp): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
a63efbb453
gnu: Add R.cache.
...
* gnu/packages/statistics.scm (r-r-cache): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
9c94b53b5b
gnu: Add R.utils.
...
* gnu/packages/statistics.scm (r-r-utils): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
c8c75a8d88
gnu: Add R.oo.
...
* gnu/packages/statistics.scm (r-r-oo): New variable.
2016-01-07 17:18:17 +01:00
Ricardo Wurmus
8bfe007c9c
gnu: Add R.methodsS3.
...
* gnu/packages/statistics.scm (r-r-methodss3): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
a69a593595
gnu: Add base64enc.
...
* gnu/packages/statistics.scm (r-base64enc): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
a8227e4ae9
gnu: Add DT.
...
* gnu/packages/statistics.scm (r-dt): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
d706257b5b
gnu: Add SparseM.
...
* gnu/packages/statistics.scm (r-sparsem): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
fb25d8803f
gnu: Add GO.db.
...
* gnu/packages/bioinformatics.scm (r-go-db): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
2fd7c04984
gnu: Add GenomicFeatures.
...
* gnu/packages/bioinformatics.scm (r-genomicfeatures): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
317755ff0f
gnu: Add rtracklayer.
...
* gnu/packages/bioinformatics.scm (r-rtracklayer): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
d8a828af78
gnu: Add GenomicAlignments.
...
* gnu/packages/bioinformatics.scm (r-genomicalignments): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
6e76dda2d0
gnu: Add SummarizedExperiment.
...
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
f8d74f7018
gnu: Add Rsamtools.
...
* gnu/packages/bioinformatics.scm (r-rsamtools): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
bf15935337
gnu: Add Biostrings.
...
* gnu/packages/bioinformatics.scm (r-biostrings): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
e91d362e48
gnu: Add BiocParallel.
...
* gnu/packages/bioinformatics.scm (r-biocparallel): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
c465fa72ed
gnu: Add biomaRt.
...
* gnu/packages/bioinformatics.scm (r-biomart): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
8b7bce740d
gnu: Add AnnotationDbi.
...
* gnu/packages/bioinformatics.scm (r-annotationdbi): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
555e3399dc
gnu: Add Biobase.
...
* gnu/packages/bioinformatics.scm (r-biobase): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
bc899123e7
gnu: Add snow.
...
* gnu/packages/statistics.scm (r-snow): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
6b82f56cf9
gnu: Add futile.logger.
...
* gnu/packages/statistics.scm (r-futile-logger): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
b9ff33b50e
gnu: Add futile.options.
...
* gnu/packages/statistics.scm (r-futile-options): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
ca65d387fd
gnu: Add lambda.r.
...
* gnu/packages/statistics.scm (r-lambda-r): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
543ded3619
gnu: Add r-xml.
...
* gnu/packages/statistics.scm (r-xml): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
cefaa79c9e
gnu: Add RCurl.
...
* gnu/packages/statistics.scm (r-rcurl): New variable.
2016-01-07 17:18:16 +01:00
Ricardo Wurmus
21e4d6a9cf
gnu: Add RSQLite.
...
* gnu/packages/statistics.scm (r-rsqlite): New variable.
2016-01-07 17:18:15 +01:00
Raimon Grau
fe9451c50a
gnu: Add xmlstarlet.
...
* gnu/packages/xml.scm (xmlstarlet): New variable.
2016-01-07 16:00:00 +01:00
宋文武
29e255ca83
gnu: zita-convolver: Drop the '-march=native' optimization.
...
* gnu/packages/audio.scm (zita-convolver)[source]: Add snippet.
2016-01-07 22:47:32 +08:00
宋文武
6dff495580
gnu: zita-resampler: Drop the '-march=native' optimization.
...
* gnu/packages/audio.scm (zita-resampler)[source]: Add snippet.
2016-01-07 22:47:32 +08:00
Ben Woodcroft
7d3a1a2dd2
gnu: Add ruby-ansi.
...
* gnu/packages/ruby.scm (ruby-ansi): New variable.
2016-01-07 15:36:05 +01:00
Efraim Flashner
b24765139c
gnu: sqlite: Update to 3.10.0.
...
* gnu/packages/databases.scm (sqlite): Update to 3.10.0.
2016-01-07 12:37:37 +02:00
Ricardo Wurmus
5dfd276602
gnu: edirect: Update to 3.50.
...
* gnu/packages/bioinformatics.scm (edirect): Update to 3.50.
[native-inputs]: Remove "unzip".
2016-01-07 11:25:24 +01:00
Leo Famulari
62339e2d49
gnu: w3m: Enable SSL, disable broken protocols and ciphers.
...
Fixes <http://bugs.gnu.org/16791 >.
* gnu/packages/patches/w3m-force-ssl_verify_server-on.patch: New file.
* gnu/packages/patches/w3m-disable-sslv2-and-sslv3.patch: New file.
* gnu/packages/patches/w3m-disable-weak-ciphers.patch: New file.
* gnu/packages/w3m.scm (w3m)[source]: Add patches.
* gnu-system.am (dist_patch_DATA): Add the new files.
2016-01-07 02:35:38 -05:00
Leo Famulari
e6352001c4
gnu: w3m: Update patch to use '-p1'.
...
* gnu/packages/patches/w3m-fix-compile.patch: Rename this file...
* gnu/packages/patches/w3m-libgc.patch: ...to this, and adjust patch
prefix level to '-p1'.
* gnu-system.am (dist_patch_DATA): Update patch name.
* gnu/packages/w3m.scm (w3m)[source]: Update patch name.
[source]: Drop patch flag -p0.
2016-01-07 02:35:38 -05:00
Efraim Flashner
93b3a8b0ee
gnu: flex: Update to 2.6.0.
...
* gnu/packages/flex.scm (flex): Update to 2.6.0.
[source]: Remove flex-bison-tests.patch.
* gnu-system.am (dist_patch_DATA): Remove flex-bison-tests.patch.
* gnu/packages/patches/flex-bison-tests.patch: Remove it.
2016-01-07 08:42:15 +02:00
Ludovic Courtès
d4aaf95401
build-system/gnu: Make 'package-with-explicit-inputs' idempotent.
...
* guix/build-system/gnu.scm (package-with-explicit-inputs): Use
'ensure-keyword-arguments' instead of appending to ARGS.
* gnu/packages/commencement.scm (static-bash-for-glibc): Add missing
#:guile argument.
2016-01-06 23:08:22 +01:00
Ludovic Courtès
dff9141c5e
gnu: guix: Update development snapshot to f888c0b
.
...
* gnu/packages/package-management.scm (guix-devel): Update to f888c0b
.
2016-01-06 23:08:22 +01:00
Efraim Flashner
bfcb7bcb73
gnu: libffi: Update to 3.2.1.
...
* gnu/packages/libffi.scm (libffi): Update to 3.2.1.
2016-01-06 20:28:57 +02:00
Eric Bavier
c7b08410de
gnu: gmsh: Update to 2.11.0.
...
* gnu/packages/maths.scm (gmsh): Update to 2.11.0.
[arguments]: Replace 'check phase.
2016-01-06 10:49:23 -06:00
Ludovic Courtès
7b78f359d1
gnu: sudo: Use /var/run/sudo instead of /run/sudo.
...
* gnu/packages/admin.scm (sudo)[arguments]: Pass
--with-rundir=/var/run/sudo since /var/run is cleaned up at boot time on
GuixSD whereas /run is not.
2016-01-06 15:51:31 +01:00
Ludovic Courtès
341ae58213
gnu: ldc: Fix license.
...
* gnu/packages/ldc.scm (ldc)[license]: Replace invalid use of
'license:x11-style' by LICENSE:BOOST1.0.
2016-01-06 14:21:53 +01:00
Ricardo Wurmus
a243e12aba
gnu: icedtea7: Rename to icedtea-7.
...
* gnu/packages/java.scm (icedtea7): Rename variable to...
(icedtea-7): ...this.
(icedtea): Refer to "icedtea-7".
2016-01-06 11:38:50 +01:00
Ricardo Wurmus
d028740622
gnu: icedtea6: Rename to icedtea-6.
...
* gnu/packages/java.scm (icedtea6): Rename variable to...
(icedtea-6): ...this.
2016-01-06 11:38:50 +01:00
Ricardo Wurmus
5452588c1a
gnu: icedtea6, icedtea7: Rename package to "icedtea".
...
* gnu/packages/java.scm (icedtea6): Change package name to "icedtea".
(icedtea7): Inherit package name.
2016-01-06 11:38:50 +01:00
Ricardo Wurmus
d2540f80c2
gnu: Add and use default IcedTea.
...
* gnu/packages/java.scm (icedtea): New variable.
(swt)[native-inputs]: Replace "icedtea6" with "icedtea".
* gnu/packages/bioinformatics.scm (htsjdk)[native-inputs]: Likewise.
(ngs-java)[inputs]: Likewise.
* gnu/packages/kodi.scm (kodi)[native-inputs]: Replace "icedtea7" with
"icedtea".
* gnu/packages/ruby.scm (ruby-rjb)[native-inputs]: Replace "icedtea7"
with "icedtea".
2016-01-06 11:38:50 +01:00
Ricardo Wurmus
d91488908b
gnu: icedtea6, icedtea7: Unpack to "openjdk.src".
...
* gnu/packages/java.scm (icedtea6)[arguments]: Unpack OpenJDK sources to
"openjdk.src".
(icedtea7)[arguments]: Inherit "--with-openjdk-src-dir" flag; refer to
"openjdk.src" in build phases; simplify "unpack" phase.
[native-inputs]: Rename "openjdk-drop" to "openjdk-src".
2016-01-06 11:38:50 +01:00
Ricardo Wurmus
43c565d2e7
gnu: Add Jellyfish.
...
* gnu/packages/bioinformatics.scm (jellyfish): New variable.
2016-01-06 11:10:46 +01:00
Andreas Enge
7d1f8d4f52
gnu: calibre: Update to 2.48.0.
...
* gnu/packages/ebook.scm (calibre): Update to 2.48.0.
2016-01-05 22:46:54 +01:00
Efraim Flashner
e5f037624e
gnu: gettext: Use "modify-phases" syntax.
...
* gnu/packages/gettext.scm (gettext)[arguments]: Use "modify-phases" syntax.
2016-01-05 21:13:57 +02:00
Efraim Flashner
d99861d39d
gnu: gettext: Update to 0.19.7.
...
* gnu/packages/gettext.scm (gettext): Update to 0.19.7.
2016-01-05 21:06:59 +02:00
Efraim Flashner
5a75865f9d
gnu: gnutls: Update to 3.4.7.
...
* gnu/packages/tls.scm (gnutls): Update to 3.4.7.
[source]: Remove gnutls-doc-fix.patch.
[arguments]: Remove delete-prebuilt-unfixed-info-file phase.
[native-inputs]: Remove texinfo.
* gnu-system.am (dist_patch_DATA): Remove gnutls-doc-fix.patch
2016-01-05 21:06:59 +02:00
Efraim Flashner
3ea110b704
gnu: libtasn1: Update to 4.7.
...
* gnu/packages/tls.scm (libtan1): Update to 4.7.
[native-inputs]: Remove texinfo.
2016-01-05 21:06:59 +02:00
Roel Janssen
a7ec569c98
gnu: Add LDC.
...
* gnu/packages/ldc.scm: New file.
* gnu/packages/patches/ldc-disable-tests.patch: New file.
* gnu-system.am (GNU_SYSTEM_MODULES): Add ldc.scm.
(dist_patch_DATA): Add patch file.
2016-01-05 16:24:57 +01:00
Ludovic Courtès
e8e2e18b84
gnu: Read 'C_INCLUDE_PATH' instead of 'CPATH'.
...
This is a followup to 009b53fd
.
* gnu/packages/cmake.scm (cmake)[arguments]: Use (getenv
"C_INCLUDE_PATH") instead of (getenv "CPATH").
* gnu/packages/package-management.scm (rpm)[arguments]: Likewise.
* gnu/packages/video.scm (avidemux)[arguments]: Likewise.
* gnu/packages/webkit.scm (webkitgtk)[arguments]: Likewise.
* gnu/packages/cross-base.scm (cross-gcc-arguments): Likewise, and unset
'C_INCLUDE_PATH' and 'CPLUS_INCLUDE_PATH'.
2016-01-05 14:11:54 +01:00
Ludovic Courtès
a2ab82db9a
gnu: python: Honor 'C_INCLUDE_PATH'.
...
This is a followup to 009b53fd
.
* gnu/packages/patches/python-3-search-paths.patch: Check
'C_INCLUDE_PATH' instead of 'CPATH'.
* gnu/packages/patches/python-2.7-search-paths.patch: Likewise.
2016-01-05 13:13:17 +01:00
Dmitry Bogatov
1075b43737
gnu: Add emacs-undo-tree.
...
* gnu/packages/emacs.scm (emacs-undo-tree): New variable.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2016-01-05 00:28:42 +01:00
Ludovic Courtès
fe542b9762
gnu: emacs: Remove 'info.info'.
...
* gnu/packages/emacs.scm (emacs)[arguments]: Use 'modify-phases'. Add
'remove-info.info' phase.
2016-01-05 00:28:42 +01:00
Ricardo Wurmus
4828ff91ff
gnu: gtk+: Add patch to support GUIX_GTK3_PATH.
...
* gnu/packages/patches/gtk3-respect-GUIX_GTK3_PATH: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gtk.scm (gtk+) [source]: Add patch.
[native-search-paths]: Add search path for GUIX_GTK3_PATH.
2016-01-04 16:11:10 -05:00
Ricardo Wurmus
2a6afac905
gnu: gtk+-2: Add patch to support GUIX_GTK2_PATH.
...
* gnu/packages/patches/gtk2-respect-GUIX_GTK2_PATH: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/gtk.scm (gtk+-2) [source]: Add patch.
[native-search-paths]: Add search path for GUIX_GTK2_PATH.
2016-01-04 16:11:10 -05:00
Efraim Flashner
4f2ca23493
gnu: libgcrypt: Update to 1.6.4.
...
* gnu/packages/gnupg.scm (libgcrypt): Update to 1.6.4.
2016-01-04 22:29:08 +02:00
Manolis Ragkousis
4478dbd58c
gnu: libgpg-error: Update to 1.21.
...
* gnu/packages/gnupg.scm (libgpg-error): Update to 1.21.
2016-01-04 18:23:29 +02:00
Efraim Flashner
82cb8519bc
gnu: tzdata: Update to 2015g.
...
* gnu/packages/base.scm (tzdata): Update to 2015g.
2016-01-04 16:59:13 +02:00
Ricardo Wurmus
c2e87caaa6
gnu: julia: Update to 0.4.2.
...
* gnu/packages/patches/julia-0.3.10-fix-empty-array.patch: Remove file.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/julia.scm (julia): Update to 0.4.2.
[arguments]: Remove phase "fix-building-with-mcjit-llvm"; replace phase
"patch-include-path" with "fix-include-and-link-paths"; add phase
"hardcode-paths"; add missing make-flags.
[inputs]: Replace "pcre" with "pcre2"; replace "git" with "libgit2"; add
"coreutils"; add "libuv-julia"; add "wget"; add "which".
[native-inputs]: Remove "which".
2016-01-04 11:35:57 +01:00
Ricardo Wurmus
50b40d0709
gnu: Add libuv-julia.
...
* gnu/packages/julia.scm (libuv-julia): New variable.
2016-01-04 11:35:57 +01:00
Ricardo Wurmus
f1e3a8aed2
gnu: utf8proc: Update to 1.3.1.
...
* gnu/packages/textutils.scm (utf8proc): Update to 1.3.1.
[arguments]: Remove custom "install" phase.
2016-01-04 11:35:57 +01:00
Leo Famulari
77553dff86
gnu: samba: Update to 4.3.3.
...
Fixes CVE-2015-{3223,5252,5299,5296,8467,5330}.
* gnu/packages/samba.scm (samba): Update to 4.3.3.
2016-01-03 14:59:49 -05:00
Leo Famulari
f6cddbefcc
gnu: ldb: Update to 1.1.24.
...
Required for samba-4.3.3 in order to fix CVE-2015-5330 and
CVE-2015-3223.
* gnu/packages/samba.scm (ldb): Update to 1.2.24.
2016-01-03 14:59:49 -05:00
Ludovic Courtès
53334dd6e9
Merge branch 'master' into core-updates
2016-01-03 14:53:03 +01:00
Ludovic Courtès
1575dcd134
gnu: grep: Skip timing-sensitive test.
...
This avoids failures on loaded machines as seen
at <http://hydra.gnu.org/build/906900/log/raw >.
* gnu/packages/patches/grep-timing-sensitive-test.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/base.scm (grep): Use it.
2016-01-03 14:50:29 +01:00
Ludovic Courtès
dd1937d75d
gnu: pkg-config: Update to 0.29.
...
* gnu/packages/pkg-config.scm (%pkg-config): Update to 0.29.
2016-01-03 14:44:22 +01:00
Eric Bavier
8d0801ab23
gnu: libgc: Enable C++ support.
...
* gnu/packages/bdw-gc.scm (libgc-7.2, libgc)[arguments]: Add
--enable-cplusplus to #:configure-flags.
2016-01-02 16:06:11 -06:00
Eric Bavier
209778717a
gnu: Add Asymptote.
...
* gnu/packages/bdw-gc.scm (libgc-for-c++): New variable.
* gnu/packages/plotutils.scm (asymptote): New variable.
* gnu/packages/patches/asymptote-gsl2.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
2016-01-02 16:04:55 -06:00
Erik Edrosa
b989390889
gnu: Add python-markdown.
...
* gnu/packages/python.scm (python-markdown, python2-markdown): New
variables.
Signed-off-by: Leo Famulari <leo@famulari.name>
2016-01-02 00:07:29 -05:00
宋文武
05d48c5243
gnu: love: Update to 0.10.0.
...
* gnu/packages/game-development.scm (love): Update to 0.10.0.
2016-01-02 10:31:53 +08:00
Ludovic Courtès
319007c507
gnu: guile-ssh: Update to 0.9.0.
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* gnu/packages/ssh.scm (guile-ssh): Update to 0.9.0.
2016-01-01 22:59:20 +01:00
Ludovic Courtès
e80d2555f5
gnu: findutils: Update to 4.6.0.
...
* gnu/packages/patches/findutils-absolute-paths.patch: Remove.
* gnu/packages/patches/findutils-test-xargs.patch: New file.
* gnu-system.am (dist_patch_DATA): Adjust accordingly.
* gnu/packages/base.scm (findutils): Update to 4.6.0. Remove
'findutils-absolute-paths.patch' and add 'findutils-test-xargs.patch'.
2016-01-01 01:05:06 +01:00
Fabian Harfert
45147b0caa
gnu: Add xaos.
...
* gnu/packages/maths.scm (xaos): New variable.
Signed-off-by: Alex Kost <alezost@gmail.com>
2015-12-31 11:29:43 +03:00
Leo Famulari
658212ebf7
gnu: Move cursynth to (gnu packages music).
...
* gnu/packages/cursynth.scm: Remove.
* gnu/packages/music.scm (cursynth): New variable, from cursynth.scm.
* gnu-system.am (GNU_SYSTEM_MODULES): Remove cursynth.scm.
2015-12-30 21:26:05 -05:00
Leo Famulari
2ef8bbc3ae
gnu: libcue: Update source URL.
...
* gnu/packages/cdrom.scm (libcue)[source]: Update URL.
2015-12-30 19:59:58 -05:00
Efraim Flashner
34da7af4c1
gnu: python-mox3: Update to 0.13.0.
...
* gnu/packages/openstack.scm (python-mox3): Update to 0.13.0.
2015-12-30 23:16:09 +02:00
Efraim Flashner
13fcc6df37
gnu: python-fixtures: Update to 1.4.0.
...
* gnu/packages/python.scm (python-fixtures): Update to 1.4.0.
2015-12-30 23:16:09 +02:00
Efraim Flashner
af1ab77312
gnu: python-pyld: Update to 0.6.8.
...
* gnu/packages/python.scm (python-pyld): Update to 0.6.8.
2015-12-30 23:16:09 +02:00
Efraim Flashner
1780424035
gnu: python-virtualenv: Update to 13.1.2.
...
* gnu/packages/python.scm (python-virtualenv): Update to 13.1.2.
[arguments]: Custom test command.
[inputs]: Remove python-nose, add python-pytest.
2015-12-30 23:16:09 +02:00
Efraim Flashner
ec89a25cad
gnu: python-oslosphinx: Update to 4.2.0.
...
* gnu/packages/openstack.scm (python-oslosphinx): Update to 4.2.0.
2015-12-30 23:16:09 +02:00
Efraim Flashner
f66bb273de
gnu: python-oslo.serialization: Update to 2.2.0.
...
* gnu/packages/openstack.scm (python-oslo.serialization): Update to 2.2.0.
2015-12-30 23:16:09 +02:00
Efraim Flashner
4768988887
gnu: python-os-testr: Update to 0.5.0.
...
* gnu/packages/openstack.scm (python-os-testr): Update to 0.5.0.
2015-12-30 23:16:09 +02:00
Efraim Flashner
45f4c28d80
gnu: python-stevedore: Update to 1.10.0.
...
* gnu/packages/openstack.scm (python-stevedore): Update to 1.10.0.
2015-12-30 23:16:09 +02:00
Efraim Flashner
622d21bba9
gnu: python-tempest-lib: Update to 0.12.0.
...
* gnu/packages/openstack.scm (python-tempest-lib): Update to 0.12.0.
2015-12-30 23:16:09 +02:00
Efraim Flashner
690e8c6637
gnu: python-passlib: Update to 1.6.5.
...
* gnu/packages/python.scm (python-passlib): Update to 1.6.5.
2015-12-30 23:16:09 +02:00
Efraim Flashner
03fd001cef
gnu: python-libarchive-c: Update to 2.2.
...
* gnu/packages/python.scm (python-libarchive-c): Update to 2.2.
2015-12-30 23:16:09 +02:00
Efraim Flashner
99b00dc796
gnu: python-tlsh: Update to 3.4.4.
...
* gnu/packages/python.scm (python-tlsh): Update to 3.4.4.
2015-12-30 23:16:09 +02:00
Efraim Flashner
b8834c219e
gnu: python-webob: Update to 1.5.1.
...
* gnu/packages/python.scm (python-webob): Update to 1.5.1.
2015-12-30 23:16:09 +02:00
Efraim Flashner
1b99553317
gnu: python-flake8: Update to 2.5.1.
...
* gnu/packages/python.scm (python-flake8): Update to 2.5.1.
2015-12-30 23:16:09 +02:00
Efraim Flashner
2abc397225
gnu: python-pyflakes: Update to 1.0.0.
...
* gnu/packages/python.scm (python-pyflakes): Update to 1.0.0.
2015-12-30 23:16:09 +02:00
Efraim Flashner
3655ee76a6
gnu: python-pyzmq: Update to 15.1.0.
...
* gnu/packages/python.scm (python-pyzmq): Update to 15.1.0.
2015-12-30 23:16:09 +02:00
Efraim Flashner
f56777be0a
gnu: python-psutil: Update to 3.3.0.
...
* gnu/packages/python.scm (python-psutil): Update to 3.3.0.
2015-12-30 23:16:09 +02:00
Efraim Flashner
38eb6919e1
gnu: python-pycparser: Update to 2.14.
...
* gnu/packages/python.scm (python-pycparser): Update to 2.14.
2015-12-30 23:16:09 +02:00
Efraim Flashner
d9aa097b96
gnu: python-pyrfc3339: Update to 1.0.
...
* gnu/packages/python.scm (python-pyrfc3339): Update to 1.0.
2015-12-30 23:16:09 +02:00
Efraim Flashner
f7cb984133
gnu: python-nose: Update to 1.3.7.
...
* gnu/packages/python.scm (python-nose): Update to 1.3.7.
2015-12-30 23:16:09 +02:00
Efraim Flashner
ec3bcbc7e4
gnu: python-rpy2: Update to 2.7.6.
...
* gnu/packages/python.scm (python-rpy2): Update to 2.7.6.
2015-12-30 23:16:09 +02:00
Efraim Flashner
11f97c27bc
gnu: pelican: Update to 3.6.3.
...
* gnu/packages/python.scm (pelican): Update to 3.6.3.
2015-12-30 23:16:09 +02:00
Efraim Flashner
e98149b3a4
gnu: python-jinja2: Update to 2.8.
...
* gnu/packages/python.scm (python-jinja2): Update to 2.8.
2015-12-30 23:16:09 +02:00
Efraim Flashner
8925d4f345
gnu: python-unidecode: Update to 0.04.18.
...
* gnu/packages/python.scm (python-unidecode): Update to 0.04.18.
2015-12-30 23:16:09 +02:00
Efraim Flashner
7fb9ff4dea
gnu: python-blinker: Update to 1.4.
...
* gnu/packages/python.scm (python-blinker): Update to 1.4.
2015-12-30 23:16:09 +02:00
Efraim Flashner
c2a9c1c0bc
gnu: python-dateutil: Update to 2.4.2.
...
* gnu/packages/python.scm (python-dateutil): Update to 2.4.2.
2015-12-30 23:16:09 +02:00
Efraim Flashner
2c3d13fe1b
gnu: isync: Update to 1.2.1.
...
* gnu/packages/mail.scm (isync): Update to 1.2.1.
2015-12-30 23:16:09 +02:00
Efraim Flashner
aadf46253a
gnu: getmail: Update to 4.48.0.
...
* gnu/packages/mail.scm (getmail): Update to 4.48.0.
2015-12-30 23:16:09 +02:00
Efraim Flashner
866fade9e5
gnu: notmuch: Update to 0.21.
...
* gnu/packages/mail.scm (notmuch): Update to 0.21.
2015-12-30 23:16:09 +02:00
Efraim Flashner
70e9d258c4
gnu: youtube-dl: Update to 2015.12.29.
...
* gnu/packages/video.scm (youtube-dl): Update to 2015.12.29.
2015-12-30 23:16:09 +02:00
Efraim Flashner
31e98ca63f
gnu: offlineimap: Update to 6.6.1.
...
* gnu/packages/mail.scm (offlineimap): Update to 6.6.1.
2015-12-30 23:16:09 +02:00
Ricardo Wurmus
3d5fd24090
gnu: Add Fritzing.
...
* gnu/packages/engineering.scm (fritzing): New variable.
2015-12-30 20:41:33 +01:00
Ludovic Courtès
0084aaf3d4
gnu: Add lcov.
...
* gnu/packages/code.scm (lcov): New variable.
2015-12-30 19:14:04 +01:00
Alex Vong
0c1910ed03
gnu: ladspa: Update URLs.
...
* gnu/packages/audio.scm (ladspa): Update source and home page url.
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2015-12-30 18:18:38 +01:00
Andreas Enge
f95dad899b
gnu: texlive: Patch texmfcnf.lua.
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* gnu/packages/texlive.scm (texlive): Patch texmfcnf.lua to point to the
absolute texlive-texmf tree.
2015-12-30 11:24:26 +01:00
Mark H Weaver
826244f01a
gnu: fuse: Fix source URI.
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This is a followup to commit b7e7d1b9d3
.
* gnu/packages/linux.scm (fuse)[source]: Fix source URI.
2015-12-29 22:25:02 -05:00
Ben Woodcroft
19f4554c94
gnu: Add fraggenescan.
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* gnu/packages/bioinformatics.scm (fraggenescan): New variable.
2015-12-29 20:14:03 -05:00
Leo Famulari
6819a8ddd6
gnu: Add shntool.
...
* gnu/packages/audio.scm (shntool): New variable.
2015-12-29 19:55:21 -05:00
Leo Famulari
6da16993eb
gnu: Add cuetools.
...
* gnu/packages/audio.scm (cuetools): New variable.
2015-12-29 19:55:21 -05:00
Efraim Flashner
11afbbc651
gnu: enlightenment: Update to 0.20.2.
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* gnu/packages/enlightenment.scm (enlightenment): Update to 0.20.2.
2015-12-29 22:52:20 +02:00
Leo Famulari
6959a13271
gnu: sshfs-fuse: Update source URL.
...
* gnu/packages/linux.scm (sshfs-fuse)[source]: Update URL.
2015-12-29 14:20:55 -05:00
Leo Famulari
b7e7d1b9d3
gnu: fuse: Update to 2.9.4.
...
* gnu/packages/patches/fuse-CVE-2015-3202.patch: Delete file.
* gnu-system.am (dist_patch_DATA): Remove it.
* gnu/packages/linux.scm (fuse): Update to 2.9.4.
[source]: Remove patch.
2015-12-29 14:20:55 -05:00
Efraim Flashner
c7d0bf0071
gnu: youtube-dl: Update to 2015.12.23.
...
* gnu/packages/video.scm (youtube-dl): Update to 2015.12.23.
2015-12-29 09:33:10 +02:00
Ricardo Wurmus
6da2e99e2e
gnu: tuxguitar: Set missing GCJFLAGS.
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* gnu/packages/music.scm (tuxguitar)[arguments]: Set compiler flags
"-fsource=1.4" and "-fPIC".
2015-12-29 07:52:19 +01:00
Ricardo Wurmus
5f1c949866
gnu: tuxguitar: Use "modify-phases" syntax.
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* gnu/packages/music.scm (tuxguitar)[arguments]: Use "modify-phases"
syntax.
2015-12-29 07:52:19 +01:00
Leo Famulari
c1ff0f2fed
gnu: irssi: Update source URL.
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* gnu/packages/irssi.scm (irssi)[source]: Update URL.
2015-12-27 17:39:03 -05:00
Efraim Flashner
85d42329b3
gnu: elementary: Update to 1.16.1.
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* gnu/packages/enlightenment.scm (elementary): Update to 1.16.1.
2015-12-27 15:33:20 +02:00
Efraim Flashner
c1a064c96e
gnu: efl: Update to 1.16.1.
...
* gnu/packages/enlightenment.scm (efl): Update to 1.16.1.
2015-12-27 14:44:29 +02:00
Efraim Flashner
e21338bec5
gnu: python-decorator: Update to 4.0.6.
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* gnu/packages/python.scm (python-decorator): Update to 4.0.6.
2015-12-26 23:10:53 +02:00
Efraim Flashner
2a2d098195
gnu: python-exif-read: Update to 2.1.2.
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* gnu/packages/python.scm (python-exif-read): Update to 2.1.2.
2015-12-26 23:10:53 +02:00
Efraim Flashner
82a3c582a3
gnu: python-coverage: Update to 4.0.3.
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* gnu/packages/python.scm (python-coverage): Update to 4.0.3.
2015-12-26 23:10:53 +02:00
Efraim Flashner
9f44228512
gnu: python-pygments: Update to 2.0.2.
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* gnu/packages/python.scm (python-pygments): Update to 2.0.2.
2015-12-26 23:10:53 +02:00
Efraim Flashner
2d3a437c79
gnu: python-cffi: Update to 1.4.2.
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* gnu/packages/python.scm (python-cffi): Update to 1.4.2.
2015-12-26 23:10:53 +02:00
Efraim Flashner
71c8a804b9
gnu: python-py: Update to 1.4.31.
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* gnu/packages/python.scm (python-py): Update to 1.4.31.
2015-12-26 23:10:53 +02:00
Leo Famulari
b8ae816b0e
gnu: tinyproxy: Update source URL.
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* gnu/packages/web.scm (tinyproxy)[source]: Update URL.
2015-12-26 11:47:42 -05:00
Leo Famulari
4beb9f3a3b
gnu: zsh: Add alternate source URL.
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* gnu/packages/zsh.scm (zsh)[source]: Add alternate URL.
2015-12-26 11:26:57 -05:00
Leo Famulari
7b10135386
gnu: znc: Update to 1.6.2.
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* gnu/packages/messaging.scm (znc): Update to 1.6.2.
2015-12-26 11:24:55 -05:00
Leo Famulari
eb2371bcdd
gnu: znc: Update source URL.
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* gnu/packages/messaging.scm (znc)[source]: Update URL.
2015-12-26 11:24:55 -05:00
Mark H Weaver
ce755b609d
gnu: libpng: Update to 1.5.26 [fixes CVE-2015-8472 and CVE-2015-8540].
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* gnu/packages/image.scm (libpng): Update to 1.5.26.
2015-12-26 11:01:01 -05:00
Efraim Flashner
fe08b6e1eb
gnu: gdk-pixbuf: Update to 2.32.3. (fixes CVE-2015-4491)
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* gnu/packages/gtk.scm (gdk-pixbuf): Update to 2.32.3.
2015-12-26 11:01:01 -05:00
Efraim Flashner
4d6b8da717
gnu: cups-filters: Update to 1.4.0. (fixes CVE-2015-8560)
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* gnu/packages/cups.scm (cups-filters): Update to 1.4.0.
2015-12-26 11:01:01 -05:00
Leo Famulari
75bae747cc
gnu: xlockmore: Update to 5.46.
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* gnu/packages/xdisorg.scm (xlockmore): Update to 5.46.
2015-12-26 02:22:20 -05:00
Leo Famulari
20c043587a
gnu: xlockmore: Add alternate URL.
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* gnu/packages/xdisorg.scm (xlockmore)[source]: Add alternate URL.
2015-12-26 02:17:46 -05:00
Leo Famulari
d642053386
gnu: wmctrl: Update source URL.
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* gnu/packages/xdisorg.scm (wmctrl)[source]: Update URL.
2015-12-26 01:55:14 -05:00
Leo Famulari
3759bfad32
gnu: colordiff: Update to 1.0.16.
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* gnu/packages/patchutils.scm (colordiff): Update to 1.0.16.
2015-12-26 00:10:32 -05:00
Leo Famulari
8d479d27ca
gnu: colordiff: Update source URL.
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* gnu/packages/patchutils.scm (colordiff)[source]: Update URL.
2015-12-26 00:10:09 -05:00
Leo Famulari
97a79b19d1
gnu: opus-tools: Update source URL.
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* gnu/packages/xiph.sch (opus-tools)[source]: Update URL.
2015-12-26 00:00:21 -05:00
Leo Famulari
5b0bcecdd1
gnu: moreutils: Update to 0.57.
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* gnu/packages/moreutils.scm (moreutils): Update to 0.57.
2015-12-25 23:59:26 -05:00
Leo Famulari
d4ec43392b
gnu: lynx: Update source URL.
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* gnu/packages/lynx.scm (lynx)[source]: Update URL.
2015-12-25 23:58:33 -05:00
Leo Famulari
4150ac88bc
gnu: libsodium: Add alternate URL.
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* gnu/packages/crypto.scm (libsodium)[source]: Add alternate URL.
2015-12-25 23:56:15 -05:00
Leo Famulari
8fa16f63e7
gnu: libev: Update source URL.
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* gnu/packages/libevent.scm (libev)[source]: Update URL.
2015-12-25 23:51:08 -05:00
Leo Famulari
8f26f23926
gnu: hevea: Update URL.
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* gnu/packages/ocaml.scm (hevea)[source]: Update URL.
2015-12-25 23:46:55 -05:00
Leo Famulari
513f8ab4f3
gnu: exim: Update to 4.86.
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* gnu/packages/mail.scm (exim): Update to 4.86.
2015-12-25 23:42:17 -05:00
Leo Famulari
fc6fdc05cb
gnu: exim: Add alternate URL.
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* gnu/packages/mail.scm (exim)[source]: Add alternate URL.
2015-12-25 23:42:17 -05:00
Leo Famulari
e1921a384c
gnu: eudev: Update home-page URL.
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* gnu/packages/linux.scm (eudev)[home-page]: Add up-to-date URL.
2015-12-25 23:40:32 -05:00
Ricardo Wurmus
9625029401
gnu: Add Bristol.
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* gnu/packages/music.scm (bristol): New variable.
2015-12-24 19:39:17 +01:00
Ricardo Wurmus
398abcf81a
gnu: lilypond: Update to 2.19.33.
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* gnu/packages/music.scm (lilypond): Update to 2.19.33.
2015-12-24 10:10:40 +01:00
Ricardo Wurmus
409be57b09
gnu: lilypond: Build info pages with images.
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* gnu/packages/music.scm (lilypond)[arguments]: Set "conf" and "out" to
"www"; rename phase "hardcode-path-to-gs" to "fix-path-references";
fix reference to "/bin/sh"; add phase "install-info".
2015-12-24 10:10:40 +01:00
Ricardo Wurmus
c493679f9a
gnu: Add Yoshimi.
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* gnu/packages/music.scm (yoshimi): New variable.
2015-12-24 10:10:40 +01:00
Ricardo Wurmus
6a91494898
gnu: Add XML::Compile::WSDL11.
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* gnu/packages/xml.scm (perl-xml-compile-wsdl11): New variable.
2015-12-24 10:10:40 +01:00
Ricardo Wurmus
baeab9b8b9
gnu: Add XML::Compile::SOAP.
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* gnu/packages/xml.scm (perl-xml-compile-soap): New variable.
2015-12-24 10:10:40 +01:00
Ricardo Wurmus
c1d41b5df3
gnu: Add XML::Compile::Cache.
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* gnu/packages/xml.scm (perl-xml-compile-cache): New variable.
2015-12-24 10:10:40 +01:00
Ricardo Wurmus
f7c4dc2f55
gnu: Add XML::LibXML::Simple.
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* gnu/packages/xml.scm (perl-xml-libxml-simple): New variable.
2015-12-24 10:10:40 +01:00
Ricardo Wurmus
8aad646637
gnu: Add File::Slurp::Tiny.
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* gnu/packages/perl.scm (perl-file-slurp-tiny): New variable.
2015-12-24 10:10:40 +01:00
Ricardo Wurmus
a05996e000
gnu: Add HTML::Template.
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* gnu/packages/web.scm (perl-html-template): New variable.
2015-12-24 10:10:40 +01:00
Ricardo Wurmus
b494a5f1bd
gnu: Add XML::Compile.
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* gnu/packages/xml.scm (perl-xml-compile): New variable.
2015-12-24 10:10:40 +01:00
Ricardo Wurmus
649e1676bc
gnu: Add XML::Compile::Tester.
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* gnu/packages/xml.scm (perl-xml-compile-tester): New variable.
2015-12-24 10:10:40 +01:00
Ricardo Wurmus
dd686c0838
gnu: Add Log::Report.
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* gnu/packages/perl.scm (perl-log-report): New variable.
2015-12-24 10:10:39 +01:00
Ricardo Wurmus
fc2448bf89
gnu: Add Log::Report::Optional.
...
* gnu/packages/perl.scm (perl-log-report-optional): New variable.
2015-12-24 10:10:39 +01:00
Ricardo Wurmus
c47b85de0c
gnu: Add String::Print.
...
* gnu/packages/perl.scm (perl-string-print): New variable.
2015-12-24 10:10:39 +01:00
Ricardo Wurmus
e92468d803
gnu: Add Unicode::LineBreak.
...
* gnu/packages/perl.scm (perl-unicode-linebreak): New variable.
2015-12-24 10:10:39 +01:00
Ricardo Wurmus
55932aeee1
gnu: Add MIME::Charset.
...
* gnu/packages/perl.scm (perl-mime-charset): New variable.
2015-12-24 10:10:39 +01:00
Leo Famulari
8f1640ed8f
gnu: gusb: Update home-page.
...
* gnu/packages/gnome.scm (gusb)[home-page]: Update home-page.
2015-12-24 02:16:57 -05:00
Mark H Weaver
097190417f
gnu: icecat: Update to 38.5.0-gnu1.
...
* gnu/packages/patches/icecat-CVE-2015-7201-pt1.patch,
gnu/packages/patches/icecat-CVE-2015-7201-pt2.patch,
gnu/packages/patches/icecat-CVE-2015-7201-pt3.patch,
gnu/packages/patches/icecat-CVE-2015-7205.patch,
gnu/packages/patches/icecat-CVE-2015-7210.patch,
gnu/packages/patches/icecat-CVE-2015-7212.patch,
gnu/packages/patches/icecat-CVE-2015-7213-pt1.patch,
gnu/packages/patches/icecat-CVE-2015-7213-pt2.patch,
gnu/packages/patches/icecat-CVE-2015-7214.patch,
gnu/packages/patches/icecat-CVE-2015-7222-pt1.patch,
gnu/packages/patches/icecat-CVE-2015-7222-pt2.patch,
gnu/packages/patches/icecat-CVE-2015-7222-pt3.patch,
gnu/packages/patches/icecat-freetype-2.6.patch: Delete files.
* gnu-system.am (dist_patch_DATA): Remove them.
* gnu/packages/gnuzilla.scm (icecat): Update to 38.5.0-gnu1.
[source]: Remove patches.
2015-12-23 18:19:59 -05:00
Mark H Weaver
bba5de0e43
gnu: nss: Update to 3.20.2.
...
* gnu/packages/gnuzilla.scm (nss): Update to 3.20.2.
2015-12-23 18:19:59 -05:00
Ben Woodcroft
1b9d4e2e20
gnu: ruby-nokogiri: Upgrade to 1.6.7.1.
...
* gnu/packages/ruby.scm (ruby-nokogiri): Upgrade to 1.6.7.1.
2015-12-23 14:02:10 -05:00
Ben Woodcroft
d000fc92b1
gnu: Add ruby-mini-portile-2.
...
* gnu/packages/ruby.scm (ruby-mini-portile-2): New variable.
2015-12-23 14:02:06 -05:00
Ricardo Wurmus
4de7aede50
gnu: icedtea7: Update to 2.6.3.
...
* gnu/packages/java.scm (icedtea7): Update to 2.6.3.
2015-12-23 14:57:58 +01:00
Ricardo Wurmus
e7173df87a
gnu: icedtea6: Update to 1.13.9.
...
* gnu/packages/java.scm (icedtea6): Update to 1.13.9.
2015-12-23 14:57:58 +01:00
Ludovic Courtès
05f1e95638
gnu: guile-2.0: Add "lib/guile/2.0/ccache" to the search path.
...
* gnu/packages/guile.scm (guile-2.0)[native-search-paths]: Add
"lib/guile/2.0/ccache" to GUILE_LOAD_COMPILED_PATH.
2015-12-22 22:29:34 +01:00
Ludovic Courtès
64cb064c0c
gnu: python-wrapper: Append "-wrapper" to the underlying package name.
...
Reported by Federico Beffa <beffa@ieee.org>.
* gnu/packages/python.scm (wrap-python3): Change the default value of
'name' to include the name of PYTHON. This disambiguates between
'python-minimal-wrapper' and 'python-wrapper'.
2015-12-22 22:24:41 +01:00
Efraim Flashner
a9257a873f
gnu: libmicrohttpd: Update to 0.9.48.
...
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.48.
2015-12-22 22:50:58 +02:00
Efraim Flashner
0877ef4342
gnu: parallel: Update to 20151222.
...
* gnu/packages/parallel.scm (parallel): Update to 20151222.
2015-12-22 22:47:44 +02:00
Efraim Flashner
419fa59b17
gnu: sipwitch: Update to 1.9.15.
...
* gnu/packages/telephony.scm (sipwitch): Update to 1.9.15.
2015-12-22 22:45:41 +02:00
Efraim Flashner
99e6f9c828
gnu: ucommon: Update to 7.0.0.
...
* gnu/packages/telephony.scm (ucommon): Update to 7.0.0.
[inputs]: Add gnutls.
2015-12-22 22:39:48 +02:00
Mark H Weaver
e54465ff85
gnu: isc-dhcp: Disable parallel build.
...
* gnu/packages/admin.scm (isc-dhcp)[arguments]: Disable parallel build.
2015-12-22 10:45:13 -05:00
Mark H Weaver
6548b1e122
gnu: isc-dhcp: Update to 4.3.3; update bundled bind to 9.9.8-P2.
...
Fixes CVE-2015-8000 and CVE-2015-8461.
* gnu/packages/admin.scm (isc-dhcp): Update to 4.3.3.
[inputs]: Add 'bind-source-tarball'.
[arguments]: Use modify-phases. Add 'replace-bundled-bind' phase.
In 'post-configure' phase, avoid hard-coding version numbers of
bundled bind.
2015-12-21 19:47:27 -05:00
Mark H Weaver
f9a5b18897
gnu: bind-utils: Update to 9.10.3-P2.
...
* gnu/packages/dns.scm (bind-utils): Update to 9.10.3-P2.
[source]: Use HTTP URI instead of FTP.
2015-12-21 19:47:26 -05:00
Ricardo Wurmus
8e92cfb101
gnu: Add vmpk.
...
* gnu/packages/music.scm (vmpk): New variable.
2015-12-21 22:09:47 +01:00
Ricardo Wurmus
bf76d7802c
gnu: Add drumstick.
...
* gnu/packages/music.scm (drumstick): New variable.
2015-12-21 22:09:47 +01:00
Leo Famulari
ef9006451f
gnu: letsencrypt and acme: Update to 0.1.1.
...
These packages should be updated together.
* gnu/packages/tls.scm (letsencrypt): Update to 0.1.1.
[source]: Use pypi-uri.
* gnu/packages/tls.scm (acme): Update to 0.1.1.
[source]: Use pypi-uri.
2015-12-21 14:35:58 -05:00
Efraim Flashner
704989660f
gnu: ffmpeg: Update to 2.8.4.
...
* gnu/packages/video.scm (ffmpeg): Update to 2.8.4.
2015-12-21 21:30:46 +02:00
Leo Famulari
f0150f8724
gnu: grub: Add fix for CVE-2015-8730.
...
* gnu/packages/patches/grub-CVE-2015-8370.patch: New file.
* gnu-system.am (dist_patch_DATA): Register patch.
* gnu/packages/grub.scm: Apply patch.
2015-12-21 12:33:55 -05:00
Ricardo Wurmus
e2cd1d0fb9
gnu: Add GenomicRanges.
...
* gnu/packages/bioinformatics.scm (r-genomicranges): New variable.
2015-12-21 17:22:16 +01:00
Ricardo Wurmus
0e7d5560de
gnu: Add XVector.
...
* gnu/packages/bioinformatics.scm (r-xvector): New variable.
2015-12-21 17:22:16 +01:00
Ricardo Wurmus
bf7764b74f
gnu: Add GenomeInfoDb.
...
* gnu/packages/bioinformatics.scm (r-genomeinfodb): New variable.
2015-12-21 17:22:16 +01:00
Ricardo Wurmus
78addcb0eb
gnu: Add IRanges.
...
* gnu/packages/bioinformatics.scm (r-iranges): New variable.
2015-12-21 17:22:16 +01:00
Ricardo Wurmus
7485129e4f
gnu: Add S4Vectors.
...
* gnu/packages/bioinformatics.scm (r-s4vectors): New variable.
2015-12-21 17:22:16 +01:00
Ricardo Wurmus
d29b25c490
gnu: Add BiocGenerics.
...
* gnu/packages/bioinformatics.scm (r-biocgenerics): New variable.
2015-12-21 17:22:16 +01:00
Ricardo Wurmus
9fba89e829
gnu: Add r-acsnminer.
...
* gnu/packages/bioinformatics.scm (r-acsnminer): New variable.
2015-12-21 17:21:26 +01:00
Ricardo Wurmus
9e47f30b08
gnu: Add r-gridextra.
...
* gnu/packages/statistics.scm (r-gridextra): New variable.
2015-12-21 17:21:26 +01:00
Ricardo Wurmus
b73751c8ff
gnu: Add r-gtable.
...
* gnu/packages/statistics.scm (r-gtable): New variable.
2015-12-21 17:21:26 +01:00
Ricardo Wurmus
77bdb276e9
gnu: Add r-rmarkdown.
...
* gnu/packages/statistics.scm (r-rmarkdown): New variable.
* gnu/packages/haskell.scm: Do not select libxml2 from the xml module to
prevent circular package module imports.
2015-12-21 17:13:44 +01:00
Ricardo Wurmus
4c1f2705b5
gnu: Add r-catools.
...
* gnu/packages/statistics.scm (r-catools): New variable.
2015-12-21 17:13:44 +01:00
Ricardo Wurmus
bb6d2dadf7
gnu: Add r-bitops.
...
* gnu/packages/statistics.scm (r-bitops): New variable.
2015-12-21 17:13:44 +01:00
Ricardo Wurmus
8406138b72
gnu: Add AdaptiveSparsity.
...
* gnu/packages/machine-learning.scm (r-adaptivesparsity): New variable.
2015-12-21 16:05:38 +01:00
Ricardo Wurmus
e22d4ca4c4
gnu: Add r-rcpparmadillo.
...
* gnu/packages/maths.scm (armadillo-for-rcpparmadillo): New variable.
* gnu/packages/statistics.scm (r-rcpparmadillo): New variable.
2015-12-21 16:05:37 +01:00
Ricardo Wurmus
b15e47f9e6
gnu: Add armadillo.
...
* gnu/packages/maths.scm (armadillo): New variable.
2015-12-21 15:47:40 +01:00
Ricardo Wurmus
086e498bcf
gnu: Add libgit2.
...
* gnu/packages/version-control.scm (libgit2): New variable.
2015-12-21 15:22:14 +01:00
Ben Woodcroft
02f35bb5a7
gnu: mafft: Update to 7.267.
...
* gnu/packages/bioinformatics.scm (mafft): Update to 7.267.
[arguments]: Don't include mafft-homologs manpage.
[inputs]: Add gawk and grep.
[propagated-inputs]: Add coreutils.
2015-12-21 15:16:01 +01:00
Mathieu Lirzin
1ef3f91a70
gnu: rxvt-unicode: Install the terminal capability data.
...
This provides the necessary terminal capability data, which are required
by ncurses-based applications.
* gnu/packages/xdisorg.scm (rxvt-unicode)[native-inputs]: Add ncurses.
[arguments]: Set the destination of the terminfo files.
[native-search-path]: New field. Make them automatically available to
the user.
2015-12-21 13:35:34 +01:00
Efraim Flashner
72d8b5baf4
gnu: msmtp: Update to 1.6.3.
...
* gnu/packages/mail.scm (msmtp): Update to 1.6.3.
[inputs]: Add libsecret.
2015-12-21 09:36:15 +02:00
Efraim Flashner
ec92806ae5
gnu: claws-mail: Update to 3.13.1.
...
* gnu/packages/mail.scm (claws-mail): Update to 3.13.1.
2015-12-21 09:17:47 +02:00
Efraim Flashner
56918e26cf
gnu: python-cython: Update to 0.23.4.
...
* gnu/packages/python.scm (python-cython): Update to 0.23.4.
2015-12-21 06:55:13 +02:00
David Thompson
e99711af22
gnu: ruby: Update to 2.2.4.
...
This version fixes CVE-2015-7551.
* gnu/packages/ruby.scm (ruby): Update to 2.2.4.
2015-12-20 22:40:53 -05:00
Efraim Flashner
54b7f63a72
gnu: offlineimap: Update to 6.6.0.
...
* gnu/packages/mail.scm (offlineimap): Update to 6.6.0.
2015-12-20 21:39:18 +02:00
Efraim Flashner
b5d47a5a53
gnu: gnupg: Update to 1.4.20.
...
* gnu/packages/gnupg.scm (gnupg-1): Update to 1.4.20.
2015-12-20 20:07:31 +02:00
宋文武
a4df575631
gnu: Add gnome-shell.
...
* gnu/packages/gnome.scm (gnome-shell): New variable.
2015-12-20 18:59:22 +08:00
宋文武
b645146f00
gnu: Add gnome-control-center.
...
* gnu/packages/gnome.scm (gnome-control-center): New variable.
2015-12-20 18:59:22 +08:00
宋文武
b96c42605b
gnu: Add gnome-bluetooth.
...
* gnu/packages/gnome.scm (gnome-bluetooth): New variable.
2015-12-20 18:59:22 +08:00
宋文武
8e1dd04f45
gnu: Add libgtop.
...
* gnu/packages/gnome.scm (libgtop): New variable.
2015-12-20 18:59:21 +08:00
宋文武
e682327976
gnu: Add colord-gtk.
...
* gnu/packages/freedesktop.scm (colord-gtk): New variable.
2015-12-20 18:59:21 +08:00
宋文武
6976e7d2ff
gnu: Add telepathy-logger.
...
* gnu/packages/freedesktop.scm (telepathy-logger): New variable.
2015-12-20 18:59:21 +08:00