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Author SHA1 Message Date
Marius Bakke feeeee2418
gnu: gst-plugins-base: Fix build on 32bit. 
* gnu/packages/patches/gst-plugins-base-fix-test-on-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gstreamer.scm (gst-plugins-base)[source]: Use it.
 2017-02-02 16:55:35 +01:00
Leo Famulari e83ef684fc
gnu: libevent-2.0: Include CVE IDs in patches. 
* gnu/packages/patches/libevent-2.0-evdns-fix-remote-stack-overread.patch,
gnu/packages/patches/libevent-2.0-evutil-fix-buffer-overflow.patch,
gnu/packages/patches/libevent-2.0-evdns-fix-searching-empty-hostnames.patch:
Rename to ...
* gnu/packages/patches/libevent-2.0-CVE-2016-10195.patch,
gnu/packages/patches/libevent-2.0-CVE-2016-10196.patch,
gnu/packages/patches/libevent-2.0-CVE-2016-10197.patch: ... new files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/libevent.scm (libevent-2.0)[sources]: Likewise.
 2017-02-02 10:52:45 -05:00
Leo Famulari e8c83d04e1
Merge branch 'master' into core-updates 2017-02-02 10:52:24 -05:00
Leo Famulari a3df7e9f86
gnu: httpd: Update to 2.4.25 [fixes CVE-2016-{0736,2161,5387,8743}]. 
* gnu/packages/web.scm (httpd): Update to 2.4.25.
[source]: Remove obsolete patch 'httpd-CVE-2016-8740.patch'.
* gnu/packages/patches/httpd-CVE-2016-8740.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-02-01 18:14:55 -05:00
Marius Bakke fd05d7ecd9
gnu: libevent: Skip tests that fail on 32bit. 
* gnu/packages/patches/libevent-2.1-skip-failing-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/libevent.scm (libevent)[source]: Use it.
 2017-02-01 22:38:25 +01:00
Marius Bakke e8fc1a0dcf
gnu: libevent: Update to 2.1.8 [security fixes]. 
* gnu/packages/libevent.scm (libevent): Update to 2.1.8.
[inputs]: Change 'python-wrapper' to 'python-2'. Move 'which' to ...
[native-inputs]: ... here. New field.
(libevent-2.0): New variable.
* gnu/packages/patches/libevent-2.1-dns-tests.patch,
  gnu/packages/patches/libevent-2.0-evdns-fix-remote-stack-overread.patch
  gnu/packages/patches/libevent-2.0-evdns-fix-searching-empty-hostnames.patch
  gnu/packages/patches/libevent-2.0-evutil-fix-buffer-overflow.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat)[inputs]: Change 'libevent' to 'libevent-2.0'.
 2017-02-01 02:42:12 +01:00
Julien Lepiller 41e8e07919
gnu: Add omake. 
* gnu/packages/ocaml.scm (omake): New variable.
* gnu/packages/patches/omake-fix-non-determinism.patch: New file.
* gnu/local.mk (dist_patch_DATA): New patch.
 2017-01-31 21:35:27 +01:00
Thomas Danckaert 59ae241f71
gnu: Add xinetd. 
* gnu/packages/web.scm (xinetd): New variable.
* gnu/packages/patches/xinetd-CVE-2013-4342.patch,
gnu/packages/patches/xinetd-fix-fd-leak.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add patches.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-31 15:06:19 -05:00
Federico Beffa d8e85b2032
gnu: ghc-8: Update to 8.0.2. 
* gnu/packages/haskell.scm (ghc-8): Update to 8.0.2.
  [arguments]: Remove #:modules, #:imported-modules and phase
  configure-testsuite.
* gnu/packages/patches/ghc-dont-pass-linker-flags-via-response-files.patch:
  New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-01-30 14:39:35 +01:00
Muriithi Frederick Muriuki 2429dde57d
gnu: Add ldc@1.1.0-beta6. 
* gnu/packages/ldc.scm (ldc-1.1.0-beta6, ldc-beta): New variables.
* gnu/packages/patches/ldc-1.1.0-disable-dmd-tests.patch: New file.
* gnu/packages/patches/ldc-1.1.0-disable-phobos-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-28 01:25:55 +01:00
Manolis Ragkousis 82a7a8c667
gnu: coreutils: Fix cross-compilation. 
* gnu/packages/patches/coreutils-fix-cross-compilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (coreutils)[source]: Use it.
 2017-01-27 10:19:25 +02:00
Leo Famulari c134959b96
gnu: gd: Incorporate grafted changes. 
* gnu/packages/gd.scm (gd)[replacement]: Remove field.
[source]: Update to 2.2.4. Remove patches 'gd-CVE-2016-7568.patch' and
'gd-CVE-2016-8670.patch'.
[arguments]: New field.
(gd-2.2.4): Remove variable.
* gnu/packages/patches/gd-CVE-2016-7568.patch,
gnu/packages/patches/gd-CVE-2016-8670.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2017-01-25 13:37:02 -05:00
Leo Famulari d123f2f991
Merge branch 'master' into core-updates 2017-01-25 12:42:39 -05:00
Leo Famulari 0769cea697
gnu: openjpeg: Fix CVE-2016-{9572,9573}. 
* gnu/packages/patches/openjpeg-CVE-2016-9572-CVE-2016-9573.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (openjpeg-2.1.2)[source]: Use it.
 2017-01-24 16:19:03 -05:00
Marius Bakke 23d57f74dc
gnu: gnupg: Update to 2.1.18. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.18.
[source]: Remove patch.
* gnu/packages/patches/gnupg-test-segfault-on-32bit-arch.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-01-24 21:48:01 +01:00
Leo Famulari b2725c53dd
gnu: khal: Update to 0.9.0. 
* gnu/packages/calendar.scm (khal): Update to 0.9.0
[source]: Remove obsolete patch.
* gnu/packages/patches/khal-disable-failing-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-01-24 01:59:51 -05:00
Leo Famulari 165259593a
gnu: libupnp: Update to 1.6.21. 
* gnu/packages/libupnp.scm (libupnp): Update to 1.6.21.
[source]: Remove obsolete patches.
* gnu/packages/patches/libupnp-CVE-2016-6255.patch,
gnu/packages/patches/libupnp-CVE-2016-8863.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2017-01-23 23:27:04 -05:00
Ludovic Courtès 58ea4d407c
Merge branch 'master' into core-updates 2017-01-23 22:33:10 +01:00
Leo Famulari 84b60a7cdf
gnu: lcms: Fix an out-of-bounds read. 
* gnu/packages/patches/lcms-fix-out-of-bounds-read.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ghostscript.scm (lcms)[replacement]: New field.
[properties]: Specify the 'cpe-name'.
(lcms/fixed): New variable.
 2017-01-23 15:34:03 -05:00
Marius Bakke d71d6fe85c
gnu: gcc@5: Respect SOURCE_DATE_EPOCH in __DATE__ and __TIME__ macros. 
* gnu/packages/patches/gcc-5-source-date-epoch-1.patch,
  gnu/packages/patches/gcc-5-source-date-epoch-2.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
* gnu/packages/gcc.scm (gcc-5)[source]: Use them.
 2017-01-23 20:39:47 +01:00
Thomas Danckaert 2903ee1ea5
gnu: duplicity: Update to 0.7.11. 
* gnu/packages/backup.scm (duplicity): Update to 0.7.11.
  [source]: Remove patches.
  [inputs]: Add lftp, update gnupg, remove python-2, make python2-lockfile a
  propagated input, make python2-mock a native-input.
  [propagated-inputs]: Add python2-lockfile, python2-urllib3.
  [native-inputs]: Add python2-pexpect, python2-mock.
  [arguments]: Add build phase to embed gnupg store name.
* gnu/packages/patches/duplicity-piped-password.patch: Delete it.
* gnu/packages/patches/duplicity-test_selection-tmp.patch: Delete it.
* gnu/local.mk (dist_patch_DATA): Remove patches.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-01-23 19:35:31 +01:00
Efraim Flashner 0e88ada940
gnu: Remove pcre-CVE-2016-3191.patch. 
This is a follow-up to 026ee1a5a6.

* gnu/packages/patches/pcre-CVE-2016-3191.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-01-23 10:28:15 +02:00
Leo Famulari 62cf8fa7cd
gnu: libtiff: Fix CVE-2017-5225. 
* gnu/packages/patches/libtiff-CVE-2017-5225.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
 2017-01-23 02:13:38 -05:00
Efraim Flashner 8ba237a280
gnu: qemu: Patch CVE-2016-10155, CVE-2017-5552. 
* gnu/packages/qemu.scm (qemu)[source]: Add patches.
* gnu/packages/patches/qemu-CVE-2016-10155.patch,
gnu/packages/patches/qemu-CVE-2017-5552.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2017-01-22 13:40:44 +02:00
José Miguel Sánchez García cacf4e9db0
gnu: Add compton. 
* gnu/packages/compton.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add compton.scm

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-21 16:43:26 +01:00
Ludovic Courtès 11f3885bb5
tests: Add 'nginx-service-type' test. 
* gnu/tests/web.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2017-01-19 14:44:59 +01:00
Ludovic Courtès 89e34644d9
gnu: Move Kerberos implemetations to (gnu packages kerberos). 
* gnu/packages/mit-krb5.scm: Remove.
* gnu/packages/shishi.scm: Remove.
* gnu/packages/kerberos.scm: New file, from the concatenation of these
two.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
* gnu/packages/admin.scm, gnu/packages/cyrus-sasl.scm,
gnu/packages/gnome.scm, gnu/packages/gnuzilla.scm,
gnu/packages/gsasl.scm, gnu/packages/java.scm,
gnu/packages/networking.scm, gnu/packages/nfs.scm,
gnu/packages/onc-rpc.scm, gnu/packages/ssh.scm,
gnu/packages/web.scm: Adjust accordingly.
 2017-01-19 00:11:15 +01:00
Efraim Flashner 9ca1972767
gnu: qemu: Fix CVE-2017-5525, CVE-2017-5526. 
* gnu/packages/qemu.scm (qemu)[source]: Add patches.
* gnu/packages/patches/qemu-CVE-2017-5525.patch,
gnu/packages/patches/qemu-CVE-2017-5526.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2017-01-18 23:32:49 +02:00
Marius Bakke a0029fda3b
gnu: xf86-video-glint: Update to 1.2.9. 
* gnu/packages/xorg.scm (xf86-video-glint): Update to 1.2.9.
[source]: Remove upstreamed patch.
* gnu/packages/patches/xf86-video-glint-remove-mibstore.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-01-18 18:19:49 +01:00
Marius Bakke f733e60345
gnu: xf86-video-nv: Update to 2.1.21. 
* gnu/packages/xorg.scm (xf86-video-nv): Update to 2.1.21.
[source]: Remove upstreamed patch.
* gnu/packages/patches/xf86-video-nv-remove-mibstore.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-01-18 18:15:56 +01:00
Danny Milosavljevic 8c6b077bfa
gnu: gdk-pixbuf: Make it reproducible. 
Fixes <http://bugs.gnu.org/25414>.

* gnu/packages/gtk.scm (gdk-pixbuf)[source](patches): New field.
 2017-01-16 16:27:51 +01:00
Mark H Weaver a5ff4d6517
Merge branch 'gnome-updates' 2017-01-16 03:53:50 -05:00
Marius Bakke af8c7e1014
gnu: mupdf: Fix CVE-2016-{10132,10133} in bundled mujs. 
* gnu/packages/patches/mupdf-mujs-CVE-2016-10132.patch,
gnu/packages/patches/mupdf-mujs-CVE-2016-10133.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/pdf.scm (mupdf)[replacement]: New field.
(mupdf/fixed): New variable.

Co-authored-by: Leo Famulari <leo@famulari.name>
 2017-01-15 20:24:30 -05:00
Julien Lepiller 2be1b4712d
gnu: Add openvpn service. 
* gnu/services/vpn.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (VPN Services): New section.
 2017-01-15 12:24:52 +01:00
Hartmut Goebel b84257c0ff
gnu: Add tipp10 touch typing tutor. 
* gnu/packages/education.scm (touch10): New variable.
* gnu/packages/patches/tipp10-fix-compiling.patch,
  gnu/packages/patches/tipp10-remove-license-code.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2017-01-14 20:13:06 +01:00
David Craven 5713993f35
gnu: libxt: Add libxt-guix-search-paths.patch. 
Followup to 54d8d0fef1.

* gnu/local.mk (dist_patch_DATA): Add it.
 2017-01-14 17:26:54 +01:00
Leo Famulari cc0725914e
Merge branch 'master' into python-tests 2017-01-13 10:21:17 -05:00
Mark H Weaver 7f760a8474
gnu: totem: Update to 3.22.0. 
* gnu/packages/gnome.scm (totem): Update to 3.22.0.
[source]: Remove patch.
* gnu/packages/patches/totem-debug-format-fix.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-01-11 11:34:08 -05:00
Leo Famulari b0a567640c
gnu: cracklib: Fix buffer overflow. 
* gnu/packages/patches/cracklib-fix-buffer-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/password-utils.scm (cracklib)[source]: Use it.
 2017-01-10 17:52:42 -05:00
Leo Famulari 4b96149d8b
gnu: libtiff: Fix CVE-2016-{10092,10093,10094} and others. 
* gnu/packages/patches/libtiff-CVE-2016-10092.patch,
gnu/packages/patches/libtiff-CVE-2016-10093.patch,
gnu/packages/patches/libtiff-CVE-2016-10094.patch,
gnu/packages/patches/libtiff-assertion-failure.patch,
gnu/packages/patches/libtiff-divide-by-zero-ojpeg.patch,
gnu/packages/patches/libtiff-divide-by-zero-tiffcp.patch,
gnu/packages/patches/libtiff-divide-by-zero-tiffcrop.patch,
gnu/packages/patches/libtiff-divide-by-zero.patch,
gnu/packages/patches/libtiff-heap-overflow-pixarlog-luv.patch,
gnu/packages/patches/libtiff-heap-overflow-tif-dirread.patch,
gnu/packages/patches/libtiff-heap-overflow-tiffcp.patch,
gnu/packages/patches/libtiff-heap-overflow-tiffcrop.patch,
gnu/packages/patches/libtiff-invalid-read.patch,
gnu/packages/patches/libtiff-null-dereference.patch,
gnu/packages/patches/libtiff-tiffcp-underflow.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff)[replacement]: New field.
(libtiff/fixed): New variable.
 2017-01-10 17:52:42 -05:00
José Miguel Sánchez García 84aafbbb66
gnu: Add nim. 
* gnu/packages/nim.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add nim.scm.
 2017-01-09 18:01:52 +01:00
Clément Lassieur 78cef99b98
gnu: Add Prosody service. 
* gnu/services/messaging.scm: New file.
* gnu/services/configuration.scm: New exported procedures.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add gnu/services/messaging.scm.
* doc/guix.texi (Messaging Services): New section.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-01-08 23:39:36 +01:00
Ben Woodcroft 6499893ef8
gnu: ruby-yard: Update to 0.9.6. 
* gnu/packages/ruby.scm (ruby-yard): Update to 0.9.6.
[source]: Use 'GitHub' source.
[arguments]: Run tests without 'Rakefile'.
[native-inputs]: Replace 'ruby-rspec-2' with ruby-rspec'.
* gnu/packages/patches/ruby-yard-fix-skip-of-markdown-tests.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-01-08 11:10:28 +10:00
Leo Famulari 1c9cea74b4
gnu: python-pygpgme: Fix build failure. 
* gnu/packages/patches/python-pygpgme-fix-pinentry-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnupg.scm (python-pygpgme, python2-pygpgme)[source]: Use it.
 2017-01-07 19:00:58 -05:00
Leo Famulari 74288230ea
Merge branch 'master' into core-updates 2017-01-06 17:14:41 -05:00
Leo Famulari aa21c764d6
gnu: python-pycrypto: Fix CVE-2013-7459. 
* gnu/packages/patches/python-pycrypto-CVE-2013-7459.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pycrypto, python2-pycrypto)[source]: Use the
patch. Use pypi-uri.
 2017-01-06 13:50:18 -05:00
Leo Famulari e50d5b8c9d
gnu: khal: Disable failing tests. 
* gnu/packages/patches/khal-disable-failing-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/calendar.scm (khal): Use it.
 2017-01-06 03:19:40 -05:00
Marius Bakke 7d7ea947f5
gnu: sed: Update to 4.3. 
* gnu/packages/base.scm (sed): Update to 4.3.
[source]: Use xz tarball. Remove upstreamed patch.
[arguments]: Fix '/bin/sh' -> 'bash' substitution.
[home-page]: Use https.
[native-inputs]: Add perl.
* gnu/packages/patches/sed-hurd-path-max.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-01-05 15:21:23 +01:00
Leo Famulari 5f0fabec54
gnu: unrtf: Fix CVE-2016-10091. 
* gnu/packages/patches/unrtf-CVE-2016-10091.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/unrtf.scm (unrtf)[source]: Use it.
 2017-01-04 14:42:58 -05:00
Ricardo Wurmus 68f9067324
gnu: inkscape: Update to 0.92.0. 
* gnu/packages/patches/inkscape-drop-wait-for-targets.patch: Remove it.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/inkscape.scm (inkscape): Update to 0.92.0.
[build-system]: Use "cmake-build-system".
[native-inputs]: Add glib:bin.
[arguments]: Remove obsolete arguments; disable tests.
 2017-01-04 18:06:44 +01:00
Julien Lepiller 44c23cb8d8
gnu: Add ocaml-bitstring. 
* gnu/packages/ocaml.scm (ocaml-bitstring): New variable.
* gnu/packages/patches/ocaml-bitstring-fix-configure.patch: New file.
* gnu/local.mk (dist_patch_DATA): New patch.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 17:41:11 +01:00
Julien Lepiller a5b5bd1d18
gnu: Add ocaml-bisect. 
* gnu/packages/ocaml.scm (ocaml-bisect): New variable.
* gnu/packages/patches/ocaml-bisect-fix-camlp4-in-another-directory.patch:
  New file.
* gnu/local.mk (dist_patch_DATA): Add patch.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 17:41:10 +01:00
Julien Lepiller 8bd10c1082
gnu: ocaml: Add a .file directive to generated .s files. 
* gnu/packages/ocaml.scm (ocaml)[origin]: Add patch.
* gnu/packages/patches/ocaml-Add-a-.file-directive.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 16:02:38 +01:00
David Craven ae482ce12d
gnu: idris: Move to (gnu packages idris). 
* gnu/packages/haskell.scm: Move 'idris' to...
* gnu/packages/idris.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add idris.scm.
 2017-01-04 11:51:36 +01:00
Alex Griffin f3a53f3c8f
gnu: slock: Update to 1.4. 
* gnu/packages/suckless.scm (slock): Update to 1.4.
[source] Remove CVE-2016-6866 patch (no longer needed).
* gnu/packages/patches/slock-CVE-2016-6866.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-03 23:39:21 -05:00
Kei Kebreau 6a37872cd2
gnu: chicken: Fix CVE-2016-{6830,6831}. 
* gnu/packages/patches/chicken-CVE-2016-6830+CVE-2016-6831.patch: New file.
* gnu/local.mk (dist_patch_DATA): Use it.
* gnu/packages/scheme.scm (chicken)[source]: Use it.
 2017-01-03 08:35:02 -05:00
Alex Vong 20be64dcf7
gnu: tar: Fix CVE-2016-6321. 
* gnu/packages/patches/tar-CVE-2016-6321.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (tar)[source]: Use it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-01-01 20:19:36 -05:00
Ben Woodcroft 25d84d3122
gnu: python-dendropy: Update to 4.2.0. 
* gnu/packages/bioinformatics.scm (python-dendropy): Update to 4.2.0.
[source]: Remove patch.
(python2-dendropy)[source]: Use the same source as python-dendropy.
* gnu/packages/patches/python-dendropy-exclude-failing-tests.patch: Remove
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-01-01 16:47:47 +10:00
Leo Famulari 858b9afeaf
gnu: libpng: Mention CVE-2016-10087. 
* gnu/packages/patches/libpng-fix-null-ptr-dereference.patch: Rename to ...
* gnu/packages/patches/libpng-CVE-2016-10087.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust.
* gnu/packages/image.scm (libpng/fixed)[source]: Use renamed patch.
 2016-12-30 14:33:21 -05:00
Ben Woodcroft a29929b32c
gnu: multiqc: Update to 0.9. 
Suggested by Raoul Bonnal <ilpuccio.febo@gmail.com>.

* gnu/packages/bioinformatics.scm (multiqc): Update to 0.9.
[origin]: Add patch.
* gnu/packages/patches/multiqc-fix-git-subprocess-error.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-12-30 17:22:43 +10:00
Leo Famulari 322e724bfa
gnu: libpng: Fix a null pointer dereference [fixes security issue]. 
* gnu/packages/patches/libpng-fix-null-ptr-dereference.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libpng)[replacement]: New field.
(libpng/fixed): New variable.
 2016-12-29 13:36:00 -05:00
Leo Famulari 3a2bcac6bd
gnu: libxml2: Fix CVE-2016-5131. 
* gnu/packages/patches/libxml2-CVE-2016-5131.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xml.scm (libxml2/fixed)[source]: Add it.
 2016-12-24 19:19:36 -05:00
Leo Famulari 0c83c6bf26
gnu: libxml2: Fix CVE-2016-4658. 
* gnu/packages/xml.scm (libxml2)[replacement]: New field.
(libxml2/fixed): New variable.
* gnu/packages/patches/libxml2-CVE-2016-4658.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-12-24 19:19:32 -05:00
Marius Bakke 059b3aa9c3
gnu: gnupg: Fix build on 32-bit architectures. 
* gnu/packages/patches/gnupg-test-segfault-on-32bit-arch.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnupg.scm (gnupg)[source]: Use it.
 2016-12-22 15:05:50 +01:00
Efraim Flashner d229ba9502
gnu: qemu: Update to 2.8.0. 
* gnu/packages/qemu.scm (qemu): Update to 2.8.0.
[source]: Remove patches.
[arguments]: Set host_cc during 'configure.
* gnu/packages/patches/qemu-CVE-2016-8576.patch,
gnu/packages/patches/qemu-CVE-2016-8577.patch,
gnu/packages/patches/qemu-CVE-2016-8577.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-12-21 21:28:15 +02:00
Thomas Danckaert 834d12226b
gnu: kdbusaddons: Embed kinit store dir, avoid dependency cycles. 
kdbusaddons needs to know the location of the kdeinit5 executable,
provided by kinit. kinit depends on kdbusaddons, so we add bootstrap
versions of all packages in the dependency chain from kinit to
kdbusaddons to avoid cyclic dependencies.

* gnu/packages/kde-frameworks.scm (kinit-bootstrap,
  kdbusaddons-bootstrap): New variables.
  (kdbusaddons)[inputs]: Add kinit-bootstrap.
  [source,arguments]: Add patch and substitution to embed
  kinit-bootstrap's store directory in the code.
* gnu/packages/patches/kdbusaddons-kinit-file-name.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-12-19 17:51:00 +01:00
Leo Famulari 43686dcb2f
gnu: openssh: Update to 7.4p1. 
* gnu/packages/ssh.scm (openssh): Update to 7.4p1.
[source]: Remove 'openssh-memory-exhaustion.patch'.
* gnu/packages/patches/openssh-memory-exhaustion.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-12-19 10:54:11 -05:00
Leo Famulari f8faf537ca
gnu: libupnp: Fix CVE-2016-8863. 
* gnu/packages/patches/libupnp-CVE-2016-8863.patch: New file.
* gnu/local.mk (dist_patch_DATA): Use it.
* gnu/packages/libupnp.scm (libupnp)[source]: Use it.
 2016-12-16 15:28:02 -05:00
Marius Bakke 7c6bf660d8
gnu: python-pyopenssl: Enable tests. 
* gnu/packages/patches/python-pyopenssl-skip-network-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl)[source]: Use it.
[arguments]: Replace 'check' with custom phase.
 2016-12-16 14:36:15 +01:00
John Darrington 7d73b2c6d0
gnu: Add system test for the rpcbind-daemon service. 
* gnu/tests/nfs.scm: New file.
* gnu/local.mk: Add it.
 2016-12-15 19:13:46 +01:00
David Craven 423f9e4494
gnu: Add rust bootstrap binaries. 
* gnu/packages/rust.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add rust.scm.
 2016-12-14 16:30:42 +01:00
Efraim Flashner e5a12fba82
gnu: onionshare: Update to 0.9.2 (fixes CVE-2016-5026). 
* gnu/packages/tor.scm (onionshare): Update to 0.9.2.
[source]: Remove patch.
[arguments]: Update substitutions for new version.
* gnu/packages/patches/onionshare-fix-install-paths.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-12-13 13:12:31 +02:00
Ludovic Courtès b810a85019
gnu: Default to GCC 5. 
This reinstates and adjusts
commit e3d0fcbf7e.

* gnu/packages/patches/gcc-libiberty-printf-decl.patch: New file.
* gnu/packages/gcc.scm (gcc-5)[source]: Use it.
[patches]: Add "gcc-arm-bug-71399.patch".
(gcc): Switch to GCC-5.
* gnu/packages/commencement.scm (libstdc++-boot0): New variable.
(gcc-boot0)[inputs]: Add it.
(gcc-toolchain-4.9): Switch to GCC-4.9.
(gcc-toolchain-5): Switch to GCC-FINAL.
* gnu/local.mk (dist_patch_DATA): Add 'gcc-libiberty-printf-decl.patch'.
 2016-12-13 00:40:57 +01:00
Tobias Geerinckx-Rice 32fd260076
gnu: cssc: Update to 1.4.0. 
* gnu/packages/version-control.scm (cssc): Update to 1.4.0.
[source]: Remove unneeded patches (i.e. all of them).
* gnu/packages/patches/cssc-gets-undeclared.patch: Delete file.
* gnu/packages/patches/cssc-missing-include.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Remove deleted patches.
 2016-12-12 22:08:45 +01:00
Mark H Weaver d94691e0c2
Merge branch 'master' into staging 2016-12-10 23:03:57 -05:00
Efraim Flashner 67c539e21f
gnu: Remove unused patch. 
* gnu/packages/patches/openjpeg-CVE-2015-6581.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-12-10 21:59:56 +02:00
Efraim Flashner a304b6c362
gnu: openjpeg: Add fixes for CVE-2016-{9850,9851}. 
* gnu/packages/image.scm (openjpeg)[replacement]: New field.
(openjpeg/fixed): New variable, patch against CVE-2016-9850,
CVE-2016-9851.
* gnu/packages/patches/openjpeg-CVE-2016-9850-CVE-2016-9851.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2016-12-10 21:46:45 +02:00
Ludovic Courtès f80b4d2ce0
Merge remote-tracking branch 'origin/master' into staging 2016-12-09 18:11:14 +01:00
Ludovic Courtès 13b5f44b47
gnu: libepoxy: Add patch to avoid segfault when GL support is missing. 
* gnu/packages/patches/libepoxy-gl-null-checks.patch: New file.
* gnu/packages/gl.scm (libepoxy)[source]: Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-12-09 18:09:43 +01:00
Leo Famulari 57513498de
gnu: tcsh: Fix out of bounds read. 
* gnu/packages/patches/tcsh-fix-out-of-bounds-read.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/shells.scm (tcsh)[replacement]: New field.
(tcsh/fixed): New variable.
 2016-12-08 13:53:36 -05:00
José Miguel Sánchez García a2c1dceadd
gnu: Add vis. 
* gnu/packages/text-editors.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
 2016-12-08 15:07:34 +01:00
Ludovic Courtès 3593e5d5c5
gnu: cross-base: Move phases to (gnu build cross-toolchain). 
* gnu/packages/cross-base.scm (cross-gcc-arguments) <#:phases>: Use
'cross-gcc-build-phases', and move body cross-toolchain.scm.
(cross-gcc): Add #:imported-modules.  Add (gnu build cross-toolchain) to
 #:modules.
* gnu/build/cross-toolchain.scm: New file, with code from
'cross-gcc-arguments'.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2016-12-07 21:52:26 +01:00
Jan Nieuwenhuizen ae12d58627
gnu: readline: support mingw. 
* gnu/packages/patches/readline-7.0-mingw.patch: New file.
* gnu-system.am (dist_patch_DATA): Add it.
* gnu/packages/readline.scm (readline): Support MinGW.
 2016-12-07 10:23:17 +01:00
Jan Nieuwenhuizen cf0ef075c4
gnu: Add mingw-w64. 
* gnu/packages/patches/gcc-4.9.3-mingw-gthr-default.patch,
gnu/packages/patches/mingw-w64-5.0rc2-gcc-4.9.3.patch,
gnu/packages/mingw.scm: New files.
* gnu/local.mk (dist_patch_DATA): Add the patches.
(GNU_SYSTEM_MODULES): Add mingw.scm.
 2016-12-07 10:23:16 +01:00
Efraim Flashner 1ebe49f192
gnu: httpd: Add fix for CVE-2016-8740. 
* gnu/packages/web.scm (httpd)[source]: Add patch for CVE-2016-8740.
* gnu/packages/patches/httpd-CVE-2016-8740.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2016-12-06 15:39:25 +02:00
Ricardo Wurmus 5a66e25ce6
gnu: Add seq24. 
* gnu/packages/music.scm (seq24): New variable.
* gnu/packages/patches/seq24-rename-mutex.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patch.
 2016-12-06 10:15:49 +01:00
Marius Bakke 76bbce6af2
gnu: mupdf: Update to 1.10a. 
* gnu/packages/patches/mupdf-CVE-2016-6265.patch: Delete file.
* gnu/packages/patches/mupdf-CVE-2016-6525.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7504.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7505.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7506.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7563.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-7564.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-8674.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-9017.patch: Likewise.
* gnu/packages/patches/mupdf-CVE-2016-9136.patch: Likewise.
* gnu/packages/patches/mupdf-build-with-openjpeg-2.1.patch: Adjust to 1.10a.
* gnu/local.mk (dist_patch_DATA): Remove deleted patches.
* gnu/packages/pdf.scm (mupdf): Update to 1.10a.
[source]: Remove patches.
 2016-12-04 17:41:54 +01:00
Marius Bakke a351fc8369
Merge branch 'master' into staging 2016-12-04 17:41:36 +01:00
Alex Kost d1a5b20081
gnu: Move image viewers to (gnu packages image-viewers). 
* gnu/packages/feh.scm (feh): Remove file.  Move package to...
* gnu/packages/geeqie.scm (geeqie): Likewise...
* gnu/packages/sxiv.scm (sxiv): Likewise...
* gnu/packages/image-viewers.scm: ... here.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove files.
 2016-12-04 17:42:05 +03:00
Efraim Flashner 760d6066f7
gnu: Rename owncloud.scm to sync.scm. 
* gnu/packages/owncloud.scm: Rename to ...
* gnu/packages/sync.scm: ... this.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register it.
 2016-12-04 08:39:48 +02:00
Mark H Weaver 5bdec7d634
gnu: icecat: Update to 45.5.1-gnu1. 
* gnu/packages/gnuzilla.scm (icecat): Update to 45.5.1-gnu1.
[source]: Remove temporary URI for 45.3 beta.  Fix URI computation.  Remove
outdated patches.  Add more cherry-picked bug fixes from upstream
mozilla-esr45.  Use 'list' instead of quasiquote in 'patches' field.
 2016-12-03 12:29:53 -05:00
Ricardo Wurmus ab519cfa3d
gnu: Add fcgi. 
* gnu/packages/patches/fcgi-2.4.0-gcc44-fixes.patch: New file.
* gnu/packages/patches/fcgi-2.4.0-poll.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patches.
* gnu/packages/web.scm (fcgi): New variable.
 2016-12-03 17:06:47 +01:00
David Craven 83dcfa72d4
gnu: flex: Update to 2.6.2. 
* gnu/packages/flex.scm (flex): Update to 2.6.2.
  [native-inputs]: Add help2man.
  [origin]: Update uri to github. Remove CVE-2016-6354 patch.
  (flex-2.6.1): Remove variable.
* gnu/packages/patches/flex-CVE-2016-6354.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Update.
* gnu/packages/kde-frameworks.scm (solid, kservice)[native-inputs]: Use
  flex.
 2016-12-02 21:28:05 +01:00
Eric Bavier 0e988a8483
gnu: vtk: Upgrade to 7.1.0. 
* gnu/packages/vtk.scm (vtk): Upgrade to 7.1.0.
[source]: Remove patches.  Use version-major+minor.
* gnu/packages/patches/vtk-mesa-10.patch: Delete patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-12-01 23:50:17 -06:00
Eric Bavier a4b0bfb195
gnu: netcdf: Upgrade to 4.4.1.1. 
* gnu/packages/maths.scm (netcdf, netcdf-parallel-openmpi): Upgrade to
4.4.1.1.
[source]: Adjust patch name, add netcdf-tst_h_par.patch
* gnu/packages/patches/netcdf-config.date.patch: Rename to...
* gnu/packages/patches/netcdf-date-time.patch: ...this.  Adjust for
latest source.
* gnu/packages/patches/netcdf-tst_h_par.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Adjust patches.
 2016-12-01 23:50:09 -06:00
Efraim Flashner 1742132fb1
gnu: gst-plugins-good: Update to 1.10.2. 
* gnu/packages/gstreamer.scm (gst-plugins-good): Update to 1.10.2.
[source]: Remove patches.
* gnu/packages/patches/gst-plugins-good-fix-crashes.patch,
gnu/packages/patches/gst-plugins-good-fix-invalid-read.patch,
gnu/packages/patches/gst-plugins-good-fix-signedness.patch,
gnu/packages/patches/gst-plugins-good-flic-bounds-check.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-12-01 12:53:30 +02:00
Efraim Flashner 161fb9be8e
gnu: nasm: Switch patch to phase. 
* gnu/packages/assembly.scm (nasm)[source]: Remove patch.
[arguments]: Disable ps and pdf doc outputs in new phase.
* gnu/packages/patches/nasm-no-ps-pdf.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-12-01 10:47:29 +02:00
Ludovic Courtès d30e578a00
gnu: Add Nagios. 
* gnu/packages/monitoring.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2016-11-30 23:31:03 +01:00
Marius Bakke 8a7cbc882a
Merge branch 'master' into staging 2016-11-30 18:24:32 +01:00
Mathieu Lirzin a7cf4eb6d9
services: Add 'cuirass-service'. 
* gnu/services/cuirass.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Continuous integration): New node.
 2016-11-29 23:13:11 +01:00
Hartmut Goebel 3bf4280659
Merge branch 'master' into python-build-system 2016-11-29 18:47:16 +01:00
Efraim Flashner c51d926c74
gnu: cairo: Fix CVE-2016-9082. 
* gnu/packages/gtk.scm (cairo)[replacement]: New field.
(cairo/fixed): New variable.
(cairo-xcb)[source]: Use patch.
[replacement]: New field, set false.
* gnu/packages/pdf.scm (poppler)[inputs]: Custom cairo should be
replaced by a new custom patched cairo.
* gnu/packages/patches/cairo-CVE-2016-9082.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2016-11-29 09:45:48 +02:00
Efraim Flashner eb55f01821
gnu: Add viewnior. 
* gnu/packages/image-viewers.scm (viewnior): New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2016-11-29 09:38:33 +02:00
Leo Famulari f265a3cee5
gnu: libarchive: Update to 3.2.2. 
* gnu/packages/backup.scm (libarchive): Update to 3.2.2.
[source]: Remove obsolete patches.
* gnu/packages/patches/libarchive-7zip-heap-overflow.patch,
gnu/packages/patches/libarchive-fix-filesystem-attacks.patch,
gnu/packages/patches/libarchive-fix-symlink-check.patch,
gnu/packages/patches/libarchive-safe_fprintf-buffer-overflow.patch:
Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-11-28 21:10:25 -05:00
Leo Famulari 6782444764
gnu: python-rarfile: Update to 2.8. 
* gnu/packages/python.scm (python-rarfile, python2-rarfile): Update to 2.8.
[source]: Remove obsolete patch.
* gnu/packages/patches/python-rarfile-fix-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-27 14:49:35 -05:00
Ricardo Wurmus dbf8f84f15
gnu: gcj: Fix build on armhf. 
* gnu/packages/patches/gcj-arm-mode.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch.
* gnu/packages/gcc.scm (gcj): Add patch.
[arguments]: Delete failing tests.
 2016-11-27 10:04:57 +01:00
Ricardo Wurmus d4ba9a5f21
gnu: Add perl-mojolicious. 
* gnu/packages/perl-web.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2016-11-27 09:48:39 +01:00
宋文武 a82f0b3617
tests: Add 'opensmtpd-service-type' test. 
* gnu/tests/mail.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2016-11-27 10:15:43 +08:00
Leo Famulari a282cdae10
Merge branch 'master' into core-updates 2016-11-26 16:21:47 -05:00
Leo Famulari cd65d600ac
gnu: cyrus-sasl: Fix CVE-2013-4122. 
* gnu/packages/patches/cyrus-sasl-CVE-2013-4122.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cyrus-sasl.scm (cyrus-sasl)[replacement]: New field.
(cyrus-sasl/fixed): New variable.
[source]: Use patch.
 2016-11-26 16:21:02 -05:00
Leo Famulari 9e46245b89
gnu: gst-plugins-good: Fix CVE-2016-{9634,9635,9636} and other security issues. 
* gnu/packages/patches/gst-plugins-good-fix-crashes.patch,
gnu/packages/patches/gst-plugins-good-fix-invalid-read.patch,
gnu/packages/patches/gst-plugins-good-fix-signedness.patch,
gnu/packages/patches/gst-plugins-good-flic-bounds-check.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gstreamer.scm (gst-plugins-good): Use them.
 2016-11-26 14:27:24 -05:00
Julien Lepiller 5305ed2002
services: Factorize configuration abstraction. 
* gnu/services/mail.scm and gnu/services/cups.scm (&configuration-error)
(configuration-error, configuration-field-error)
(configuration-missing-field, configuration-field, serialize-configuration)
(validate-configuration, define-configuration, uglify-field-name)
(serialize-field, serialize-package, serialize-string)
(serialize-space-separated-string-list, space-separated-string-list?)
(serialize-file-name, file-name?, serialize-field-name)
(generate-documentation): Move duplicate code...
* gnu/services/configuration.scm: ...to this new file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add configuration.scm.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2016-11-26 19:46:01 +01:00
ng0 ebfc2ecc3c
gnu: Move content of (gnu packages psyc) into (gnu packages messaging). 
* gnu/packages/psyc.scm (perl-net-psyc, libpsyc, psyclpc): Move this ...
* gnu/packages/messaging.scm (perl-net-psyc, libpsyc, psyclpc): ... here.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove psyc.scm.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2016-11-26 13:23:46 -05:00
Leo Famulari de32aa74b4
Merge branch 'master' into python-build-system 2016-11-25 11:20:21 -05:00
Leo Famulari 0bd1097c50
gnu: libtiff: Update to 4.0.7. 
* gnu/packages/image.scm (libtiff): Update to 4.0.7.
[source]: Update URL and remove obsolete patches.
[home-page]: Update URL.
[native-inputs]: Add gcc-5.
(libtiff-4.0.7): Delete variable.
* gnu/packages/patches/libtiff-CVE-2015-8665+CVE-2015-8683.patch,
gnu/packages/patches/libtiff-CVE-2016-3623.patch,
gnu/packages/patches/libtiff-CVE-2016-3945.patch,
gnu/packages/patches/libtiff-CVE-2016-3990.patch,
gnu/packages/patches/libtiff-CVE-2016-3991.patch,
gnu/packages/patches/libtiff-CVE-2016-5314.patch,
gnu/packages/patches/libtiff-CVE-2016-5321.patch,
gnu/packages/patches/libtiff-CVE-2016-5323.patch,
gnu/packages/patches/libtiff-oob-accesses-in-decode.patch,
gnu/packages/patches/libtiff-oob-write-in-nextdecode.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-11-23 22:53:43 -05:00
Leo Famulari 2ac7d54616
Merge branch 'master' into staging 2016-11-23 22:24:52 -05:00
Leo Famulari c0bb7178be
gnu: libtiff: Update to 4.0.7. 
* gnu/packages/image.scm (libtiff): Update to 4.0.7.
[source]: Update URL and remove obsolete patches.
[home-page]: Update URL.
(libtiff-4.0.7): Delete variable.
* gnu/packages/patches/libtiff-CVE-2015-8665+CVE-2015-8683.patch,
gnu/packages/patches/libtiff-CVE-2016-3623.patch,
gnu/packages/patches/libtiff-CVE-2016-3945.patch,
gnu/packages/patches/libtiff-CVE-2016-3990.patch,
gnu/packages/patches/libtiff-CVE-2016-3991.patch,
gnu/packages/patches/libtiff-CVE-2016-5314.patch,
gnu/packages/patches/libtiff-CVE-2016-5321.patch,
gnu/packages/patches/libtiff-CVE-2016-5323.patch,
gnu/packages/patches/libtiff-oob-accesses-in-decode.patch,
gnu/packages/patches/libtiff-oob-write-in-nextdecode.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-11-23 00:17:12 -05:00
Ludovic Courtès 01f94cca19
gnu: Add 'lvm2-static'. 
* gnu/packages/patches/lvm2-static-link.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (lvm2)[source](patches): New field.
(lvm2-static): New variable.
 2016-11-22 22:59:31 +01:00
Leo Famulari be72eb98fa
gnu: libtiff: Update replacement to 4.0.7. 
* gnu/packages/image.scm (libtiff)[replacement]: Update to 4.0.7.
(libtiff-4.0.7): New variable. Update home-page and source URLs.
(libtiff/fixed): Delete variable.
* gnu/packages/patches/libtiff-CVE-2016-5652.patch,
gnu/packages/patches/libtiff-CVE-2016-9273.patch,
gnu/packages/patches/libtiff-CVE-2016-9297.patch,
gnu/packages/patches/libtiff-CVE-2016-9448.patch,
gnu/packages/patches/libtiff-uint32-overflow.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-11-22 12:30:36 -05:00
ng0 e01e2c6c52
gnu: services: Add git-service. 
* gnu/services/version-control.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Misellaneous Services)[Version Control]: New section.

Co-authored-by: 宋文武 <iyzsong@member.fsf.org>
 2016-11-21 20:37:43 +08:00
Julien Lepiller 1845c2a436
gnu: Add php. 
* gnu/packages/php.scm: New file.
* gnu/packages/patches/gd-fix-chunk-size-on-boundaries.patch: New file.
* gnu/packages/patches/gd-fix-truecolor-format-correction.patch: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add php.
(dist_patch_DATA): Add gd patches.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
 2016-11-20 17:54:14 +01:00
Ben J Woodcroft 66b1bac355
gnu: ruby: Update to 2.3.2. 
* gnu/packages/ruby.scm (ruby): Update to 2.3.2.
[replacement]: Remove field.
[origin]: Remove patch.
* gnu/packages/patches/ruby-symlinkfix.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-20 15:50:10 +10:00
Leo Famulari 2fedcd1895
gnu: libtiff: Fix CVE-2016-9448. 
* gnu/packages/patches/libtiff-CVE-2016-9448.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
 2016-11-19 11:31:00 -05:00
Ludovic Courtès 8134dc1f74
gnu: guile@2.0.13: Fix non-determinism issue in REPL server test. 
* gnu/packages/patches/guile-repl-server-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/guile.scm (guile-2.0.13)[source]: Use it.
 2016-11-18 18:28:02 +01:00
Eric Bavier fe047e1380
gnu: Add Handbrake. 
* gnu/packages/video.scm (handbrake): New variable.
* gnu/packages/patches/handbrake-pkg-config-path.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-11-16 20:58:12 -06:00
Leo Famulari 1339a8ed1c
gnu: libtiff: Fix some buffer overflows. 
* gnu/packages/patches/libtiff-uint32-overflow.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
 2016-11-16 19:59:28 -05:00
Leo Famulari 7cea56e2ac
gnu: libtiff: Fix CVE-2016-9297. 
* gnu/packages/patches/libtiff-CVE-2016-9297.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed)[source]: Use it.
 2016-11-16 19:59:24 -05:00
Mark H Weaver 1a87aa7567
gnu: icecat: Add fixes from Firefox ESR 45.5.0. 
Includes fixes for CVE-2016-5290, CVE-2016-5291, CVE-2016-5297, CVE-2016-9064,
and CVE-2016-9066.

* gnu/packages/gnuzilla.scm (icecat)[source][patches]: Add fixes for
aforementioned CVEs and other selected fixes from Firefox ESR 45.5.0.  Note
that the first six patches of CVE-2016-5290 and the patch for CVE-2016-9066
were already present, but were labeled by mozilla bug number instead of CVE.
* gnu/packages/patches/icecat-CVE-2016-9064.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-11-16 13:04:02 -05:00
Mark H Weaver 56ac2bf442
gnu: pixman: Add fix for CVE-2016-5296. 
* gnu/packages/patches/pixman-CVE-2016-5296.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xdisorg.scm (pixman)[replacement]: New field.
(pixman/fixed): New variable.
 2016-11-16 13:03:56 -05:00
Hartmut Goebel 15e57f5762
gnu: python-2.7: Add all guix prefixes in PYTHONPATH to site-prefixes. 
* gnu/packages/patches/python-2.7-site-prefixes.patch: New file.
* gnu/packages/python.scm (python-2)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add patch.
 2016-11-15 17:37:48 +01:00
Leo Famulari d9721bcf27
gnu: readline-6.2: Fix CVE-2014-2524. 
* gnu/packages/patches/readline-6.2-CVE-2014-2524.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/readline.scm (readline-6.2): Use it.
 2016-11-13 17:01:01 -05:00
Ludovic Courtès 142530178d
gnu: mailutils: Update to 3.0. 
* gnu/packages/mail.scm (mailutils): Update to 3.0.
[arguments]: Adjust 'pre-build' phase.
* gnu/packages/patches/m4-gets-undeclared.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
 2016-11-13 21:12:32 +01:00
Ludovic Courtès 2cab1dd58b
Merge branch 'core-updates' 2016-11-13 00:34:16 +01:00
Efraim Flashner 15abcabe4e
gnu: Add newsbeuter. 
* gnu/packages/syndication.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2016-11-12 20:50:48 +02:00
Leo Famulari 5c66314bd9
gnu: libtiff: Fix CVE-2016-9273. 
* gnu/packages/patches/libtiff-CVE-2016-9273.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/image.scm (libtiff/fixed): Use it.
 2016-11-12 11:05:19 -05:00
Ben Woodcroft e2bb2e1780
gnu: ruby-yard: Update to 0.9.5-1.d816482a. 
* gnu/packages/ruby.scm (ruby-yard): Update to 0.9.5-1.d816482a.
[source]: Update source URL.
[arguments]: Remove unneeded substitutions.  Change test target.
* gnu/packages/patches/ruby-yard-fix-skip-of-markdown-tests.patch (New
file)
* gnu/local.mk (dist_patch_DATA): Add it.
 2016-11-11 22:15:37 +10:00
Ludovic Courtès 8033772363
gnu: gcc@5, gcc@6: Work around use of 'movabs' for /gnu/store strings. 
Partly addresses <http://bugs.gnu.org/24703>.
Reported by Mark H Weaver <mhw@netris.org>.

* gnu/packages/patches/gcc-strmov-store-file-names.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gcc.scm (gcc-5)[sources](patches): Add it.
(gcc-6)[sources](patches): Add it.
 2016-11-09 21:24:44 +01:00
Leo Famulari 0b34b58688
gnu: libxslt: Fix CVE-2016-4738. 
* gnu/packages/patches/libxslt-CVE-2016-4738.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/xml.scm (libxslt)[replacement]: New field.
(libxslt/fixed): New variable.
 2016-11-09 10:19:49 -05:00
John Darrington 859e367d07
gnu: Add pam-krb5 service. 
* doc/guix.texi (Kerberos Services): New node.
* gnu/services/kerberos.scm: New file.
* gnu/local.mk: Add it.
 2016-11-08 21:35:26 +01:00
Leo Famulari 667e777b4e
gnu: mupdf: Fix CVE-2016-{7504,7505,7506,7563,7564,9017,9136} in bundled mujs. 
* gnu/packages/patches/mupdf-CVE-2016-7504.patch,
gnu/packages/patches/mupdf-CVE-2016-7505.patch
gnu/packages/patches/mupdf-CVE-2016-7506.patch
gnu/packages/patches/mupdf-CVE-2016-7563.patch
gnu/packages/patches/mupdf-CVE-2016-7564.patch
gnu/packages/patches/mupdf-CVE-2016-9017.patch
gnu/packages/patches/mupdf-CVE-2016-9136.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/pdf.scm (mupdf)[source]: Use them.
 2016-11-08 11:03:14 -05:00
Theodoros Foradis 842a1400a7
gnu: Add plantuml. 
* gnu/packages/uml.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Roel Janssen <roel@gnu.org>
 2016-11-08 14:59:04 +01:00
Mark H Weaver 71e21fb26d
Merge branch 'master' into core-updates 2016-11-07 00:33:16 -05:00
Leo Famulari 14ac8e4865
gnu: jansson: Update to 2.9. 
* gnu/packages/web.scm (jansson): Update to 2.9.
[source]: Remove 'jansson-CVE-2016-4425.patch'.
* gnu/packages/patches/jansson-CVE-2016-4425.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-06 19:50:30 -05:00
Marius Bakke 6dbf1fec0d
gnu: lua: Update to 5.3.3. 
* gnu/packages/patches/lua52-liblua-so.patch: Rename to ...
* gnu/packages/patches/lua-liblua-so.patch: ... this. Add version comment.
* gnu/local.mk (dist_patch_DATA): Adjust patch name.
* gnu/packages/lua.scm (lua): Update to 5.3.3.
[source]: Use https URL. Use new patch name.
[home-page]: Use https URL.
(lua-5.2): New variable.
(lua-5.1)[source]: Use https URL.
 2016-11-06 16:17:16 +00:00
Mark H Weaver 8b6ad165d1
Merge branch 'master' into core-updates 2016-11-06 03:29:06 -05:00
Leo Famulari 2d125a9b21
gnu: weex: Update to 2.8.2 [fixes CVE-2005-3150]. 
* gnu/packages/ftp.scm (weex): Update to 2.8.2.
[source]: Use new URL. Remove obsolete 'weex-vacopy.patch'.
[arguments]: Remove custom 'configure' phase and add 'bootstrap' phase.
[native-inputs]: Add autoconf, automake, and gnu-gettext.
* gnu/packages/patches/weex-vacopy.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-05 13:31:44 -04:00
Kei Kebreau 674a0f9558
gnu: w3m: Switch to Debian's actively maintained fork of w3m. 
Fixes some security issues seen here:
<http://www.openwall.com/lists/oss-security/2016/11/03/3>

* gnu/packages/w3m.scm (w3m): Switch it.
[source]: Use Debian's git tree. Remove obsolete patches.
[arguments]: Remove an unneeded substitute* function.
* gnu/packages/patches/w3m-disable-sslv2-and-sslv3.patch,
gnu/packages/patches/w3m-disable-weak-ciphers.patch,
gnu/packages/patches/w3m-force-ssl_verify_server-on.patch,
gnu/packages/patches/w3m-libgc.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2016-11-04 20:06:03 -04:00
Ricardo Wurmus accd5f996e
gnu: python-ipython: Update to 4.0.0. 
* gnu/packages/python.scm (python-ipython): Update to 4.0.0.
[inputs]: Keep only "readline" and "which"; move the remaining inputs
to propagated-inputs, except for "python-requests" and "python-nose"
which are moved to native-inputs.
[propagated-inputs]: Add "python-pexpect", "python-pickleshare",
"python-simplegeneric", "python-traitlets", "python-ipykernel".
[native-inputs]: Add "python-testpath".
[arguments]: Enable building of HTML documentation.
[source]: Remove patch.
* gnu/packages/patches/python-ipython-inputhook-ctype.patch: Remove
patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2016-11-04 21:23:07 +01:00
Leo Famulari 8d806cb0e0
gnu: ola: Fix build failure caused by use of deprecated function. 
* gnu/packages/patches/ola-readdir-r.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/lighting.scm (ola)[source]: Use it.
 2016-11-04 01:44:42 -04:00
Kei Kebreau b81245ccb3
[PATCH] gnu: Add libjxr. 
* gnu/packages/image.scm (libjxr): New variable.
* gnu/packages/patches/libjxr-fix-function-signature.patch: New file.
* gnu/packages/patches/libjxr-fix-typos.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register patches.
 2016-11-03 13:43:23 -04:00