Commit Graph

1463 Commits

Author SHA1 Message Date
Mark H Weaver c0d7c1244a
Merge branch 'master' into core-updates 2018-05-29 21:20:47 -04:00
Kei Kebreau 3771000f89
gnu: swig: Patch for Octave 4.4.
* gnu/packages/swig.scm (swig)[source]: Add patch.
* gnu/packages/patches/swig-octave-patches.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-05-29 18:20:38 -04:00
Mark H Weaver 82b695b834
Merge branch 'master' into core-updates 2018-05-28 20:45:37 -04:00
Mark H Weaver 073cc31313
gnu: Fix typo.
Fix a typo introduced in commit 2101cc3fb6.

* gnu/local.mk: Add back the missing comment character.
2018-05-28 09:04:44 -04:00
Fis Trivial 385357c0d7
gnu: Add fifo-map.
* gnu/packages/cpp.scm (fifo-map): New variable.
* gnu/packages/patches/fifo-map-fix-flags-for-gcc.patch: New file.
* gnu/packages/patches/fifo-map-remove-catch.hpp.patch: New file.
* gnu/local.mk: Add new patch files.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-28 13:48:52 +02:00
Pierre Langlois 01c4869003
gnu: libmygpo-qt: Fix Qt 5.11 build.
The update to Qt 5.11.0 broke libmygpo-qt. It turned it was using a deprecated
CMake function (qt5_use_moduldes).  Let's pick up two upstream patches that
fix the issue: https://github.com/gpodder/libmygpo-qt/pull/15

As mentioned in the the pull request, there is now a test failure but it looks
harmless.

* gnu/packages/patches/libmygpo-qt-fix-qt-5.11.patch,
gnu/packages/patches/libmygpo-qt-missing-qt5-modules.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/music.scm (libmygpo-qt)[source]: Add patches.
[arguments]: Build tests but do not run them.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2018-05-27 22:33:01 +03:00
Julien Lepiller 2101cc3fb6
gnu: gnu: Make alsa find its plugins by setting ALSA_PLUGIN_DIR.
* gnu/packages/patches/alsa-lib-add-environment-variable.patch: New
file.
* gnu/packages/linux.scm (alsa-lib)[source]: Use it.
[native-search-paths]: Add ALSA_PLUGIN_DIR.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-05-27 19:05:34 +02:00
Mark H Weaver 9d10a63402
Merge branch 'master' into core-updates 2018-05-24 02:34:08 -04:00
Ludovic Courtès e470abf8b7
gnu: Move 'indent' to code.scm.
Suggested by Pierre Neidhardt <ambrevar@gmail.com>.

* gnu/packages/indent.scm: Remove.  Move 'indent' to...
* gnu/packages/code.scm (indent):  ... here.  New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove indent.scm.
2018-05-23 12:14:27 +02:00
Rutger Helling e0c9aed820
gnu: mesa: Update to 18.0.4.
* gnu/packages/gl.scm (mesa): Update to 18.0.4.
[source]: Remove mesa-wayland-egl-symbols-check-mips.patch.
[arguments]: Remove wayland from --with-platforms configure flag.
* gnu/local.mk: Remove mesa-wayland-egl-symbols-check-mips.patch.
* gnu/packages/patches/mesa-wayland-egl-symbols-check-mips.patch: Remove file.
2018-05-22 18:09:59 +02:00
Mark H Weaver 0661758e13
Merge branch 'master' into core-updates 2018-05-21 13:22:32 -04:00
Andreas Enge a92d97266d
gnu: pius: Fix incompatibility with newer GnuPG versions.
* gnu/packages/gnupg.scm (pius)[source]: Add patch.
* gnu/packages/patches/pius.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-05-21 17:05:56 +02:00
Efraim Flashner 122f91bd41
gnu: enlightenment: Fix setuid program locations.
* gnu/packages/enlightenment.scm (enlightenment)[source]: Add patch.
* gnu/packages/patches/enlightenment-fix-setuid-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-05-20 21:42:25 +03:00
Mark H Weaver 539bf8f2c0
Merge branch 'master' into core-updates 2018-05-17 01:00:50 -04:00
Ricardo Wurmus 4eeed444f1
gnu: python-statsmodels: Fix build.
* gnu/packages/patches/python-statsmodels-fix-tests.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/statistics.scm (python-statsmodels)[source]: Remove patches.
[arguments]: Disable tests; adjust build phases; add build phase
"patch-for-scipy" to fix runtime error.
2018-05-16 04:40:20 +02:00
Arun Isaac cbd2e3d52d
gnu: wesnoth: Update to 1.14.1.
* gnu/packages/games.scm (wesnoth): Update to 1.14.1.
[source]: Remove wesnoth-fix-std-bad-cast.patch.
* gnu/packages/patches/wesnoth-fix-std-bad-cast.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
2018-05-15 16:47:27 +05:30
Efraim Flashner 2b79c6833d
gnu: mupdf: Update to 1.13.0.
* gnu/packages/pdf.scm (mupdf): Update to 1.13.0.
[source]: Remove patches.
* gnu/packages/patches/mupdf-build-with-latest-openjpeg.patch,
gnu/packages/patches/mupdf-CVE-2017-17858.patch,
gnu/packages/patches/mupdf-CVE-2018-6544.patch,
gnu/packages/patches/mupdf-CVE-2018-1000051.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-05-14 12:09:40 +03:00
Efraim Flashner aa8ac02944
gnu: myrepos: Fix CVE-2018-7032.
* gnu/packages/version-control.scm (myrepos)[source]: Add patch.
* gnu/packages/patches/myrepos-CVE-2018-7032.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-05-13 20:39:36 +03:00
Ludovic Courtès d801cd0509
gnu: Add Robocut.
* gnu/packages/printers.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-05-13 13:29:27 +02:00
Mark H Weaver d2cebbf694
gnu: icecat: Relabel patches to reflect CVE assignments.
Document the fact that we include fixes for CVE-2018-5154, CVE-2018-5155,
CVE-2018-5157, CVE-2018-5158, CVE-2018-5159, CVE-2018-5168, CVE-2018-5178,
and 9/10 changesets for CVE-2018-5150.

* gnu/packages/gnuzilla.scm (icecat)[source]: Relabel patches to reflect CVE
assignments.
* gnu/packages/patches/icecat-bug-1452075.patch: Rename to...
* gnu/packages/patches/icecat-CVE-2018-5157-and-CVE-2018-5158.patch: ...this.
* gnu/local.mk (dist_patch_DATA): Rename it.
2018-05-11 06:07:43 -04:00
Danny Milosavljevic be906ad16e
gnu: Add android-libutils.
* gnu/packages/patches/libutils-add-includes.patch: New file.
* gnu/packages/patches/libutils-remove-damaging-includes.patch: New file.
* gnu/packages/android.scm (android-platform-system-core): Use them.
(android-libutils): New variable.
* gnu/local.mk: Add them.
2018-05-09 22:32:36 +02:00
Danny Milosavljevic 16c2be0b42
gnu: Add android-libziparchive.
* gnu/packages/android.scm (android-libziparchive): New variable.
* gnu/packages/patches/libziparchive-add-includes.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-05-09 22:19:59 +02:00
Danny Milosavljevic f6e75b0db2
gnu: adb: Use android-ndk-build-system.
* gnu/packages/android.scm (adb)[build-system]: Switch to
android-ndk-build-system.
[arguments]<#:tests?>: Disable.
[arguments]<#:phases>[create-Makefile]: Delete phase.
[arguments]<#:phases>[fix-clang]: Delete phase.
[arguments]<#:phases>[fix-main]: Delete phase.
[arguments]<#:phases>[make-libs-available]: New phase.
[arguments]<#:phases>[install-headers]: New phase.
[arguments]<#:make-flags]: Add CFLAGS, CXXFLAGS.
[inputs]: Add liblog.
[source]: Add patch "adb-add-libraries.patch".
* gnu/packages/patches/adb-add-libraries.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-05-09 19:16:36 +02:00
Julien Lepiller fdc9170bc1
gnu: Add java-groovy-bootstrap.
* gnu/packages/groovy.scm: New file.
* gnu/packages/patches/groovy-add-exceptionutilsgenerator.patch: New
file.
* gnu/local.mk (GNU_SYSTEM_MODULES, dist_patch_DATA): Add them.
2018-05-09 13:36:06 +02:00
Mark H Weaver aedc6e9fc9
Merge branch 'master' into core-updates 2018-05-08 18:45:39 -04:00
Arun Isaac e554d43dfc
gnu: wesnoth: Update to 1.14.0.
* gnu/packages/patches/wesnoth-fix-std-bad-cast.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/games.scm (wesnoth): Update to 1.14.0.
[source]: Add wesnoth-fix-std-bad-cast.patch to patches.
[arguments]: Remove "-DENABLE_STRICT_COMPILATION=OFF" configure flag.
[inputs]: Remove sdl-image, sdl-mixer, sdl-net and sdl-ttf. Add openssl and
sdl-union of sdl2, sdl2-image, sdl2-mixer and sdl2-ttf.
[home-page]: Use HTTPS URI.
(wesnoth-server)[inputs]: Remove sdl-net. Add icu4c, openssl and sdl2.
[arguments]: Remove delete-data phase. Since wesnoth 1.14.0, configure flag
"-DENABLE_GAME=OFF" disables installation of game assets.
2018-05-08 09:40:37 +05:30
Marius Bakke 6e7be7d37a
gnu: strace: Fix build failure on Linux-Libre 4.16.
* gnu/packages/patches/strace-kernel-4.16.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/linux.scm (strace)][source](patches): New field.
2018-05-06 21:05:11 +02:00
Marius Bakke 12bd588346
Merge branch 'master' into core-updates 2018-05-06 15:56:24 +02:00
Oleg Pykhalov 8cd1e8e849
gnu: Add sound service.
* gnu/services/sound.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add this.
* doc/guix.texi (Sound Services): New chapter.
2018-05-02 15:11:13 +03:00
Rutger Helling 7d5adf0131
gnu: e2fsprogs: Fix build with glibc-2.27.
* gnu/packages/patches/e2fsprogs-glibc-2.27.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (e2fsprogs)[source]: Add patch.
2018-05-02 10:11:43 +02:00
Tobias Geerinckx-Rice 506737f191
gnu: liboop: Update to 1.0.1.
* gnu/packages/ssh.scm (liboop): Update to 1.0.1.
[source]: Update source URI.  Remove patch.
* gnu/packages/patches/liboop-mips64-deplibs-fix.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-05-01 19:29:40 +02:00
Tobias Geerinckx-Rice 2e402618f6
gnu: shadow: Update to 4.6.
* gnu/packages/admin.scm (shadow): Update to 4.6.
[source]: Remove upstreamed patch.
* gnu/packages/patches/shadow-CVE-2018-7169.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-05-01 13:38:58 +02:00
Leo Famulari 9eecf9bc13
gnu: gimp: Update to 2.10.0.
* gnu/packages/gimp.scm (gimp): Update to 2.10.0.
[inputs]: Add glib-networking, gexiv2, libmypaint, mypaint-brushes and
poppler-data.
[native-inputs]: Add glib:bin.
[source]: Remove obsolete patches and use HTTPS URL.
[home-page]: Use HTTPS URL.
* gnu/packages/patches/gimp-CVE-2017-17784.patch,
gnu/packages/patches/gimp-CVE-2017-17785.patch,
gnu/packages/patches/gimp-CVE-2017-17786.patch,
gnu/packages/patches/gimp-CVE-2017-17787.patch,
gnu/packages/patches/gimp-CVE-2017-17789.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-04-30 21:07:58 -04:00
Leo Famulari f62633ca2d
gnu: gegl: Update to 0.4.
* gnu/packages/gimp.scm (gegl): Update to 0.4.
[inputs]: Move babl and glib to propagated-inputs.
[propagated-inputs]: Add json-glib.
[arguments]: Re-enable the tests and remove the obsolete 'pre-build'
phase.
[source]: Use HTTPS URL.
* gnu/packages/patches/gegl-CVE-2012-4433.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-04-30 21:07:58 -04:00
fis 1170198d65
gnu: Add amule.
* gnu/packages/networking.scm (amule): New public variable.
* gnu/packages/patches/amule_crypto-6.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-04-30 23:41:22 +02:00
Mark H Weaver f0ae90cbbb
Merge branch 'master' into core-updates 2018-04-30 16:48:15 -04:00
Mark H Weaver 59bc15cf88
gnu: icecat: Add more fixes from upstream mozilla-esr52.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes
from the upstream mozilla-esr52 repository.
* gnu/packages/patches/icecat-bug-1452075.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-04-30 16:46:40 -04:00
Mark H Weaver 3d5ad159b3
Merge branch 'master' into core-updates 2018-04-30 04:03:54 -04:00
Julien Lepiller f1f4a4f016
gnu: Add java-apache-ivy.
* gnu/package/java.scm (java-apache-ivy): New variable.
* gnu/packages/patches/java-apache-ivy-port-to-latest-bouncycastle.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-04-29 23:23:14 +02:00
Eric Bavier d98e9009a9
gnu: scotch: Update to 6.0.5a.
* gnu/packages/patches/pt-scotch-build-parallelism.patch: Delete files.
* gnu/packages/patches/scotch-build-parallelism.patch,
gnu/packages/patches/scotch-graph-diam-64.patch,
gnu/packages/patches/scotch-graph-induce-type-64.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/maths.scm (scotch): Update to 6.0.5a.
[source](patches): Adjust accordingly.
2018-04-26 20:54:18 -05:00
Tobias Geerinckx-Rice 72dae07296
gnu: quassel: Update to 0.12.5.
* gnu/packages/irc.scm (quassel): Update to 0.12.5.
[source]: Remove patch.
* gnu/packages/patches/quassel-fix-tls-check.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-04-27 02:56:44 +02:00
Tobias Geerinckx-Rice ca2158bb3a
gnu: pcmanfm: Update to 1.3.0.
* gnu/packages/lxde.scm (pcmanfm): Update to 1.3.0.
[source]: Remove patch.
* gnu/packages/patches/pcmanfm-CVE-2017-8934.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-04-27 02:56:43 +02:00
Roel Janssen cbd9f91c32
gnu: bcftools: Update to 1.8.
* gnu/packages/bioinformatics.scm (bcftools): Update to 1.8.
* gnu/local.mk: Remove patch.
* gnu/packages/patches/bcftools-regidx-unsigned-char.patch: Remove file.
2018-04-27 01:11:42 +02:00
Leo Famulari 379848ed31
gnu: zsh: Update to 5.5.1.
* gnu/packages/shells.scm (zsh): Update to 5.5.1.
[source]: Remove obsolete patches.
* gnu/packages/patches/zsh-CVE-2018-7548.patch,
gnu/packages/patches/zsh-CVE-2018-7549.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-04-26 15:06:03 -04:00
Marius Bakke 460292af30
gnu: qemu: Update to 2.12.0.
* gnu/packages/patches/qemu-CVE-2018-7550.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/virtualization.scm (qemu): Update to 2.12.0.
[source](patches): Remove.
2018-04-24 21:14:20 +02:00
Mark H Weaver c52872bfc4
Merge branch 'master' into core-updates 2018-04-21 05:02:52 -04:00
Leo Famulari e45f399bf9
gnu: qemu: Fix CVE-2018-7550.
* gnu/packages/patches/qemu-CVE-2018-7550.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/virtualization.scm (qemu)[source]: Use it.
2018-04-18 11:38:45 -04:00
Pierre Langlois d09e31bdf6
gnu: libmygpo-qt: Update to 1.1.0.
* gnu/packages/music.scm (libmygpo-qt): Update to 1.1.0.
[source]: Remove 'patches'.
[arguments]: Do not set BUILD_WITH_QT4=OFF, it is the default.
* gnu/packages/patches/libmygpo-qt-fix-jsoncreatortest.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-04-17 00:08:45 +02:00
Marius Bakke d0ee11b2f0
gnu: sharutils: Fix CVE-2018-1000097.
* gnu/packages/patches/sharutils-CVE-2018-1000097.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/compression.scm (sharutils)[source](patches): Use it.
2018-04-16 18:02:14 +02:00
Manolis Ragkousis fdb61400a0
gnu: mupen64plus-video-z64: Fix glew.h location.
* gnu/packages/patches/mupen64plus-video-z64-glew-correct-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/emulators.scm (mupen64plus-video-z64)[source]: Use it.
2018-04-15 15:17:21 +03:00
Marius Bakke fe4adc12ed
gnu: htop: Update to 2.2.0.
* gnu/packages/patches/htop-fix-process-tree.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/admin.scm (htop): Update to 2.2.0.
[source](patches): Remove.
2018-04-15 12:31:49 +02:00
Efraim Flashner 1606da6c07
gnu: Add missing freeimage patch.
This is a follow-up to a5d4c96b8d.

* gnu/packages/patches/freeimage-unbundle.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-04-13 10:57:04 +03:00
Eric Bavier de7f234a3a
gnu: datamash: Fix tests on ARM systems.
* gnu/packages/patches/datamash-arm-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/datamash.scm (datamash)[source]: Use it.
2018-04-12 22:55:51 -05:00
Eric Bavier 306d8630dc
gnu: cool-retro-term: Update to 1.0.1.
* gnu/packages/terminals.scm (cool-retro-term): Update to 1.0.1.
[source]: Programmatically remove fonts.
[arguments]: Simplify 'configure phase and use 'invoke'.  Add 'install-man
phase.  'let*' -> 'let' where possible.
* gnu/packages/patches/cool-retro-term-remove-non-free-fonts.patch: Delete.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-04-12 21:01:34 -05:00
Mark H Weaver ecfe88b764
gnu: qemu: Fix build with glibc-2.27.
* gnu/packages/patches/qemu-glibc-2.27.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/virtualization.scm (qemu)[source]: Add patch.
[native-inputs]: Add flex and bison.
* gnu/packages/bootloaders.scm (qemu-minimal-2.10)[source]: Add patch.
2018-04-10 00:48:07 -04:00
Mark H Weaver caf4c7c8bd
gnu: btrfs-progs: Update to 4.15.1, fix build, use invoke.
* gnu/packages/patches/btrfs-progs-e-value-block.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (btrfs-progs): Update to 4.15.1.
[arguments]: Use invoke.
[native-inputs]: Add grep.
2018-04-10 00:47:12 -04:00
Mark H Weaver 713c975ac0
gnu: boost: Fix ICU support.
* gnu/packages/patches/boost-fix-icu-build.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/boost.scm (boost)[source]: Add the patch.
[arguments]: In the custom configure phase, pass --with-icu=[...]
to ./bootstrap.sh
2018-04-10 00:46:22 -04:00
Mark H Weaver f89aa1521a
Merge branch 'master' into core-updates 2018-04-10 00:42:22 -04:00
Marius Bakke 9bdbabe963
gnu: llvm, clang: Update to 6.0.0.
* gnu/packages/llvm.scm (llvm, clang-runtime, clang): Update to 6.0.0.
(clang-from-llvm)(patches): Set to empty list.
[arguments]: Adjust substitutions depending on major version.
(llvm-3.8, clang-runtime-3.8, clang-3.8): New public variables.
(clang-3.7, clang-3.6, clang-3.5)(patches): Add 'clang-3.5-libc-search-path.patch'.
(clang-3.9.1)(patches): Add 'clang-3.8-libc-search-path.patch'.
* gnu/packages/patches/clang-6.0-libc-search-path.patch: New file.
* gnu/packages/patches/clang-libc-search-path.patch: Rename to ...
* gnu/packages/patches/clang-3.5-libc-search-path.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2018-04-06 17:46:03 +02:00
Roel Janssen ea09f99f7f
gnu: 4store: Remove preprocessor directive.
* gnu/packages/databases.scm (4store): Add patch to remove preprocessor
  directive.
* gnu/packages/patches/4store-unset-preprocessor-directive.patch: New file.
* gnu/local.mk: Register patch.
2018-04-04 14:54:02 +02:00
Efraim Flashner 1bf7ef856b
gnu: libgpg-error: Fix building on aarch64-linux.
* gnu/packages/patches/gnupg.scm (libgpg-error)[source]: Add patch.
* gnu/packages/patches/libgpg-error-aarch64-logging-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-04-02 15:17:57 +03:00
Ludovic Courtès 6422bde9b4
gnu: glibc: Reinstate fallback code for systems lacking 'prlimit64'.
* gnu/packages/patches/glibc-reinstate-prlimit64-fallback.patch: New file.
* gnu/packages/base.scm (glibc/linux)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-04-01 12:36:02 +02:00
Arun Isaac 6009cdb4e3
gnu: python-pycairo: Update to 1.16.3.
* gnu/packages/gtk.scm (python-pycairo): Update to 1.16.3.
[source]: Remove patch.
[build-system]: Switch to python-build-system.
[native-inputs]: Remove python-waf.
[home-page]: Use HTTPS URI.
* gnu/packages/patches/pycairo-wscript.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
2018-03-31 00:29:35 +05:30
Roel Janssen fdc306879b
gnu: Add delly.
* gnu/packages/bioinformatics.scm (delly): New variable.
* gnu/packages/patches/delly-use-system-libraries.patch: New file.
* gnu/local.mk: Include delly-use-system-libraries.patch.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-03-30 10:48:01 -04:00
Marius Bakke 5576cfabf3
Merge branch 'master' into core-updates 2018-03-29 17:34:41 +02:00
Marius Bakke ab0bdd5456
gnu: util-linux: Update to 2.32.
* gnu/packages/patches/util-linux-tests.patch: Adjust context.
* gnu/packages/patches/util-linux-CVE-2018-7738.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/linux.scm (util-linux): Update to 2.32.
[source](patches): Remove 'util-linux-CVE-2018-7738.patch'.
2018-03-29 02:43:06 +02:00
Mark H Weaver d4040f6e23
gnu: elogind: Fix build with glibc-2.27.
* gnu/packages/patches/elogind-glibc-2.27.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/freedesktop.scm (elogind)[source]: Add patch.
[arguments]: Replace the bootstrap phase with what was previously the
autogen phase.
2018-03-28 00:04:35 -04:00
Leo Famulari 4d99a3215c
gnu: mupdf: Fix CVE-2018-{6544,1000051}.
* gnu/packages/patches/mupdf-CVE-2018-1000051.patch,
gnu/packages/patches/mupdf-CVE-2018-6544.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/pdf.scm (mupdf)[source]: Use them.
2018-03-27 19:00:03 -04:00
Oleg Pykhalov 196c8b3739
gnu: translate-shell: Update to 0.9.6.7.
* gnu/packages/patches/translate-shell-fix-curl-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/dictionaries.scm (translate-shell): Update to 0.9.6.7.
[source](patches): Add it.  [home-page]: Append slash.
2018-03-26 22:47:16 +03:00
Ludovic Courtès d2c036557a
gnu: hwloc@2: Update to 2.0.1.
* gnu/packages/mpi.scm (hwloc-2.0): Update to 2.0.1.
[source]: Remove 'patches'.
* gnu/packages/patches/hwloc-tests-without-sysfs.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2018-03-26 18:24:55 +02:00
Efraim Flashner bab9793f54
gnu: classpath: Add aarch64-linux support.
* gnu/packages/java.scm (classpath-bootstrap, classpath-0.99)[source]:
Add patch.
* gnu/packages/patches/classpath-aarch64-support.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-03-26 12:21:33 +03:00
Danny Milosavljevic 6cf2ac3cd6
gnu: Add pure.
* gnu/packages/pure.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-25 17:02:01 +02:00
Mark H Weaver d624eaaa37
gnu: pulseaudio: Fix build with glibc-2.27.
* gnu/packages/patches/pulseaudio-glibc-2.27.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pulseaudio.scm (pulseaudio)[source]: Add the patch.
[arguments]: Replace 'bootstrap' phase.
[native-inputs]: Add autoconf, automake, and libtool.
2018-03-25 05:01:47 -04:00
Tobias Geerinckx-Rice 929e2d9f98
gnu: links: Update to 2.15.
* gnu/packages/web-browsers.scm (links): Update to 2.15.
[source]: Remove patch for fixed CVE.
* gnu/packages/patches/links-CVE-2017-11114.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-03-25 00:36:30 +01:00
Arun Isaac 89db6c6de9
gnu: cmake: Update to 3.10.2.
* gnu/packages/cmake.scm (cmake): Update to 3.10.2.
[source]: Remove cmake-fix-tests patch.
Do not remove bundled cmlibuv.
[arguments]: Replace system* with invoke.
[inputs]: Add rhash. Sort.
[home-page]: Update URL.
* gnu/packages/patches/cmake-fix-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Unregister it.
2018-03-23 11:32:24 +05:30
Danny Milosavljevic ec40a0501f
gnu: Add lyx.
* gnu/packages/patches/lyx-2.2.3-fix-test.patch: New file.
* gnu/local.mk: Add it.
* gnu/packages/tex.scm (lyx): New variable.
2018-03-22 23:11:17 +01:00
Marius Bakke e9b9ea1ec0
gnu: make: Fix compatibility with glibc 2.27.
* gnu/packages/patches/make-glibc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/base.scm (gnu-make)[source](patches): Use it.
2018-03-22 18:58:05 +01:00
Marius Bakke 5e8cb5e698
gnu: glibc: Update to 2.27.
* gnu/packages/base.scm (glibc/linux): Update to 2.27.
[source](patches): Add 'glibc-hidden-visibility-ldconfig.patch' and
'glibc-2.27-git-fixes.patch'.
[native-inputs]: Add BISON.
[arguments]: Remove deprecated "--enable-add-ons" from #:configure-flags.
Also remove unneeded "libc_cv_ssp=no" and "libcv_ssp_strong=no".
(glibc-2.26): New public variable.
* gnu/packages/commencement.scm (glibc-final-with-bootstrap-bash)[native-inputs]:
Add BISON-BOOT0.
* gnu/packages/patches/glibc-2.27-git-fixes.patch,
gnu/packages/patches/glibc-hidden-visibility-ldconfig.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
2018-03-22 18:58:05 +01:00
Ludovic Courtès ca5b73114f
gnu: shepherd: Update to 0.4.0.
* gnu/packages/admin.scm (shepherd): Update to 0.4.0.  Remove patches.
* gnu/packages/patches/shepherd-close-fds.patch,
gnu/packages/patches/shepherd-herd-status-sorted.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/services/admin.scm (%default-rotations): Remove
/var/log/shepherd.log.
2018-03-22 11:43:30 +01:00
Mark H Weaver ac21be848a
Merge branch 'master' into core-updates 2018-03-20 14:22:06 -04:00
Marius Bakke dc7e07c9b9
Merge branch 'staging' 2018-03-20 14:13:05 +01:00
Marius Bakke 019c0eda94
gnu: fontconfig: Update to 2.13.0.
* gnu/packages/patches/fontconfig-remove-debug-printf.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/fontutils.scm (fontconfig): Update to 2.13.0.
[source](patches): Remove.
[propagated-inputs]: Add UTIL-LINUX.
2018-03-20 11:57:25 +01:00
Mark H Weaver 647888845c
Merge branch 'master' into core-updates 2018-03-20 00:49:05 -04:00
Tobias Geerinckx-Rice eaa69a7996
gnu: libtirpc: Update to 1.0.3.
* gnu/packages/onc-rpc.scm (libtirpc): Update to 1.0.3.
[source]: Remove patch.
* gnu/packages/patches/libtirpc-missing-headers.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-03-19 13:25:27 +01:00
Mark H Weaver 56f31a9fd5
gnu: guile-gdbm-ffi: Add support for gdbm-1.14.
* gnu/packages/patches/guile-gdbm-ffi-support-gdbm-1.14.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

* gnu/packages/guile.scm (guile-gdbm-ffi)[inputs]: Move above arguments.  Add
the patch, and the 'patch' program.
[propagated-inputs]: Move above arguments.
[arguments]: In the builder, add code to apply the patch.
2018-03-18 23:30:31 -04:00
Marius Bakke 7ace97395f
Merge branch 'master' into staging 2018-03-18 01:09:25 +01:00
Christopher Baines be5ed14213
gnu: Add terraform-docs.
* gnu/packages/terraform.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-17 23:04:29 +00:00
Gábor Boskovits 3c27414968
gnu: java-simple-xml: Fix java8 test failures.
* gnu/packages/patches/javas-simple-xml-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/java.scm (java-simple-xml)[source](patches): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-03-18 00:02:05 +01:00
Mark H Weaver 96c7fde7dd
gnu: libvorbis: Ungraft.
* gnu/packages/xiph.scm (libvorbis): Update to 1.3.6.
[replacement]: Remove field.
[source]: Remove patches.
(libvorbis-1.3.6): Remove variable.
2018-03-17 03:36:11 -04:00
Mark H Weaver 9f388b1ee1
Merge branch 'master' into core-updates 2018-03-17 01:18:37 -04:00
Marius Bakke ff19532fd5
gnu: binutils: Update to 2.30.
* gnu/packages/patches/binutils-ld-new-dtags.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/base.scm (binutils): Update to 2.30.
[source](patches): Remove obsolete patch.
[arguments]: Add "--enable-new-dtags" in #:configure-flags.
2018-03-16 15:32:22 +01:00
Leo Famulari 77166eb758
gnu: util-linux: Fix CVE-2018-7738.
* gnu/packages/patches/util-linux-CVE-2018-7738.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (util-linux)[replacement]: New field.
(util-linux/fixed): New variable.
2018-03-16 10:31:52 -04:00
Mark H Weaver 45413064c9
gnu: tar: Fix sparse file detection on Btrfs file systems.
* gnu/packages/patches/tar-remove-wholesparse-check.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (tar)[source]: Add patch.
2018-03-16 09:31:00 -04:00
Leo Famulari 20ecede969
gnu: shadow: Fix CVE-2018-7169.
* gnu/packages/patches/shadow-CVE-2018-7169.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (shadow)[source]: Use it.
2018-03-15 13:13:35 -04:00
Marius Bakke 2f437b22e2
gnu: glib: Update to 2.56.0.
* gnu/packages/glib.scm (glib): Update to 2.56.0.
[source](patches): Remove obsolete patch.
[arguments]: Disable new MIME test.
* gnu/packages/patches/glib-respect-datadir.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-03-15 00:02:46 +01:00
Ricardo Wurmus 8c72ed923d
Merge branch 'master' into core-updates 2018-03-14 17:37:20 +01:00
Ricardo Wurmus 2b5c5f03c2
gnu: Add ada.scm to GNU_SYSTEM_MODULES.
This is a follow-up to commit ebd43a2a45.

* gnu/local.mk (GNU_SYSTEM_MODULES): Add ada.scm.
2018-03-14 13:21:26 +01:00
Efraim Flashner 8e1cd1a2c5
gnu: Add debian-archive-keyring.
* gnu/packages/debian.scm (debian-archive-keyring): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-12 21:54:44 +02:00
Marius Bakke a248a9ac6a
Merge branch 'staging-next' into staging 2018-03-12 18:22:53 +01:00
Tobias Geerinckx-Rice 5400fdfd5d
gnu: lrzip: Fix CVE-2017-8842.
* gnu/packages/compression.scm (lrzip)[source]: Add patch.
* gnu/packages/patches/lrzip-CVE-2017-8842.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-03-12 18:15:21 +01:00
Gábor Boskovits 594bd3a08a
gnu: java-jeromq: Fix tests.
* gnu/packages/patches/java-jeromq-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/java.scm (java-jeromq)[source](patches): Add it.
[arguments](#test-exclude): Disable more failing tests.
2018-03-11 20:06:06 +01:00
Leo Famulari f55aa0c7b7
gnu: zsh: Fix CVE-2018-{7548,7549}.
* gnu/packages/patches/zsh-CVE-2018-7548.patch,
gnu/packages/patches/zsh-CVE-2018-7549.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/shells.scm (zsh)[source]: Use them.
2018-03-10 12:30:53 -05:00
Marius Bakke d8fa1890c7
Merge branch 'master' into staging 2018-03-08 21:21:05 +01:00
Marius Bakke 236b7aed82
gnu: libxcb: Update to 1.13.
* gnu/packages/xorg.scm (libxcb): Update to 1.13.
[source](patches): Remove.
* gnu/packages/patches/libxcb-python-3.5-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2018-03-08 18:30:41 +01:00
Marius Bakke 460d07b463
gnu: xcb-proto: Update to 1.13.
* gnu/packages/xorg.scm (xcb-proto): Update to 1.13.
[source](patches): Remove.
* gnu/packages/patches/xcb-proto-python3-print.patch,
gnu/packages/patches/xcb-proto-python3-whitespace.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2018-03-08 18:30:41 +01:00
Marius Bakke 6eb45016d6
gnu: graphite2: Update to 1.3.11.
* gnu/packages/patches/graphite2-ffloat-store.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/fontutils.scm (graphite2): Update to 1.3.11.
[source](patches): Remove.
2018-03-08 14:01:29 +01:00
Hartmut Goebel 7ac43c44e8
gnu: giflib: Make "reallocarray" private, solve glibc@2.26 conflict.
Rename the function and move the declaration from gif_lib.h to
gif_lib_private.h to solve conflicts when some .c-file #includes
both stdlib.h and gif_lib.h.
See also https://sourceforge.net/p/giflib/bugs/110/

* gnu/packages/patches/giflib-make-reallocarray-private.patch: New
  file
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/image.scm(giflib)[source](patches): New field.
2018-03-08 09:05:52 +01:00
Marius Bakke 5de561a796
gnu: gnome-todo: Fix compatibility with libical >= 3.0.
* gnu/packages/patches/gnome-todo-libical-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnome.scm (gnome-todo)[source](patches): Use it.
2018-03-07 15:06:22 +01:00
Julien Lepiller 41125eaff8
gnu: Add maven-resolver-api.
* gnu/packages/maven.scm: New file.
(maven-resolver-api): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-06 23:05:34 +01:00
Leo Famulari 613ef763a5
Merge branch 'master' into staging 2018-03-06 13:39:12 -05:00
Marius Bakke 5b0b520e22
gnu: ceph: Update to 12.2.4.
* gnu/packages/patches/ceph-disable-cpu-optimizations.patch: Adjust to
upstream changes.
* gnu/packages/patches/ceph-disable-unittest-throttle.patch: Delete file.
* gnu/packages/patches/ceph-rocksdb-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/storage.scm (ceph): Update to 12.2.4.
[source](patches): Adjust.
[arguments]: Add "-DWITH_BABELTRACE=OFF" in #:configure-flags.  Build with
CMAKE-3.11.  Adjust file substitutions.  Wrap 'ceph' executable.
[native-inputs]: Add GPERF.
[inputs]: Replace BOOST with BOOST-1.66.  Add PYTHON2-PRETTYTABLE.
2018-03-04 17:54:40 +01:00
Gábor Boskovits 48c8622010
gnu: antlr3-3.3: Fix java8 issue.
* gnu/packages/java.scm (antlr3-3.3)[source]: Add patch.
* gnu/packages/patches/antlr3-3_3-fix-java8-compilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2018-03-04 14:16:37 +01:00
Gábor Boskovits 4c763b4d67
gnu: antlr3-3.1: Fix java8 issue.
* gnu/packages/java.scm (antlr3-3.1)[source]: Add patch.
* gnu/packages/patches/antlr3-3_1-fix-java8-compilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
2018-03-04 14:13:47 +01:00
Ricardo Wurmus fa5965990d
gnu: Add r-hpar.
* gnu/packages/bioconductor.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-03-02 23:24:57 +01:00
Mark H Weaver 8863f2f051
gnu: icecat: Update to 52.6.0-gnu1.
* gnu/packages/gnuzilla.scm (icecat): Update to 52.6.0-gnu1.
[source]: Remove patches that are no longer needed.
* gnu/packages/patches/icecat-bug-1348660-pt5.patch,
gnu/packages/patches/icecat-bug-1414945.patch,
gnu/packages/patches/icecat-bug-1415133.patch,
gnu/packages/patches/icecat-bug-1424373-pt2.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-03-02 01:31:19 -05:00
Julien Lepiller 8147d7c675
gnu: php: Fix test failure.
* gnu/packages/php.scm (php)[inputs]: Use gd-for-php.
(gd-for-php): New private variable.
* gnu/packages/patches/gd-CVE-2018-5711.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-03-01 22:25:28 +01:00
Ricardo Wurmus b672a81607
gnu: Graft glibc to allow execution on Linux 2.6.32.
* gnu/packages/patches/glibc-allow-kernel-2.6.32.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/base.scm (glibc/linux)[replacement]: New field.
(glibc-2.26-patched): New variable.
2018-03-01 21:32:36 +01:00
Marius Bakke 86990eeda2
Merge branch 'master' into staging 2018-03-01 18:04:12 +01:00
Tobias Geerinckx-Rice 9d43579f2d
gnu: dovecot: Update to 2.3.0.1 [fixes CVE-2017-14461].
* gnu/packages/mail.scm (dovecot): Update to 2.3.0.1.
[source]: Remove upstreamed patch.
* gnu/packages/patches/dovecot-CVE-2017-15132.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-28 22:58:23 +01:00
Marius Bakke 53453d7acc
gnu: wavpack: Fix CVE-2018-6767.
* gnu/packages/patches/wavpack-CVE-2018-6767.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/audio.scm (wavpack)[source](patches): Add it.
2018-02-28 20:29:46 +01:00
Tobias Geerinckx-Rice 8297ff0f93
gnu: pcre2: Update to 10.31.
* gnu/packages/pcre.scm (pcre2): Update to 10.31.
[source]: Remove upstreamed patches.
* gnu/packages/patches/pcre2-CVE-2017-7186.patch: Delete this file...
* gnu/packages/patches/pcre2-CVE-2017-8786.patch: ...and this one.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-02-28 18:23:31 +01:00
Marius Bakke b39667cdcb
gnu: python-mox3: Update to 0.24.0.
* gnu/packages/openstack.scm (python-mox3): Update to 0.24.0.
[source](patches): New field.
[arguments]: Remove.
[native-inputs]: Add PYTHON-OPENSTACKDOCSTHEME and PYTHON-SUBUNIT.  Replace
PYTHON-SPHINX with PYTHON-SPHINX-1.6.  Move PYTHON-PBR and PYTHON-FIXTURES ...
[propagated-inputs]: ... here.  New field.
[description]: Don't mention explicit Python versions.
* gnu/packages/patches/python-mox3-python3.6-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-02-28 13:59:00 +01:00
Tobias Geerinckx-Rice 1143450c14
gnu: dblatex: Update to 0.3.10.
* gnu/packages/docbook.scm (dblatex): Update to 0.3.10.
[source]: Remove patch.
* gnu/packages/patches/dblatex-remove-multirow.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-28 04:13:19 +01:00
Oleg Pykhalov e1cf4fd2d2
services: cgit: Add more configuration fields.
* gnu/services/version-control.scm (cgit-service-type): Move to separate file.
* gnu/services/cgit.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add this.
* gnu/tests/version-control.scm: Add this.
* doc/guix.texi (Cgit Service): Document this.
2018-02-28 04:40:56 +03:00
Tobias Geerinckx-Rice d5d7d26df7
gnu: perl-gd: Update to 2.68.
* gnu/packages/gd.scm (perl-gd): Update to 2.68.
[source]: Remove obsolete patch.
[native-inputs]: Remove perl-module-build.
[inputs]: Use canonical package names and order alphabetically.
[arguments]: Replace #:module-build-flags with fewer #:make-maker-flags,
enable #:tests?, and remove ‘clear-autogenerated-files’ phase.
* gnu/packages/patches/perl-gd-options-passthrough-and-fontconfig.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-27 16:49:58 +01:00
Marius Bakke 2115bde302
gnu: python-parse: Update to 1.8.2.
* gnu/packages/patches/python-parse-too-many-fields.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/python.scm (python-parse): Update to 1.8.2.
[source](patches): Remove.
[arguments]: Use INVOKE instead of SYSTEM*.
2018-02-26 02:39:15 +01:00
Alex ter Weele f61682e7ea
gnu: Add agda.
* gnu/packages/agda.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add adga.scm.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-02-26 01:42:35 +01:00
Marius Bakke 5697897537
gnu: json-glib: Fix 32-bit test failures.
* gnu/packages/patches/json-glib-fix-tests-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnome.scm (json-glib)[source](patches): New field.
2018-02-25 04:28:21 +01:00
Kei Kebreau 0181df537f
gnu: wxmaxima: Update to 18.02.0.
* gnu/packages/maths.scm (wxmaxima): Update to 18.02.0.
[source]: Add patch.
[build-system]: Use the cmake-build-system.
[native-inputs]: Remove autoconf and automake.
[arguments]: Disable tests, remove 'autoconf' phase.
* gnu/packages/patches/wxmaxima-do-not-use-old-gnuplot-parameters.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-24 18:05:52 -05:00
Marius Bakke e58bf025df
Merge branch 'master' into core-updates 2018-02-24 21:49:30 +01:00
Marius Bakke 5f9b018aa8
Merge branch 'master' into staging 2018-02-24 19:04:13 +01:00
Oleg Pykhalov d5ee4342c0
gnu: Add perl-regexp-pattern-license.
* gnu/packages/license.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add this.
2018-02-24 20:01:29 +03:00
Clément Lassieur 60628f5452
gnu: password-store: Fix compatibility with GnuPG 2.2.5.
* gnu/packages/patches/password-store-gnupg-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/password-utils.scm (password-store)[source]: Use it.
2018-02-24 12:57:39 +01:00
Marius Bakke 65f704f373
gnu: wavpack: Fix CVE-2018-7253 and CVE-2018-7254.
* gnu/packages/patches/wavpack-CVE-2018-7253.patch,
gnu/packages/patches/wavpack-CVE-2018-7254.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
* gnu/packages/audio.scm (wavpack)[source](patches): Use them.
2018-02-23 20:40:51 +01:00
Tobias Geerinckx-Rice bbf8832f16
gnu: optipng: Update to 0.7.7 [security fixes].
This release claims to fix 2 vulnerabilities:
- ‘an integer overflow vulnerability in the TIFF decoder’
  (CVE-2017-1000229, previously patched in Guix), and
- ‘a buffer overflow vulnerability in the GIF decoder’.

* gnu/packages/image.scm (optipng): Update to 0.7.7.
[source]: Remove patch.
[arguments]: Substitute INVOKE for SYSTEM* and end phase with #t.
* gnu/packages/patches/optipng-CVE-2017-1000229.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-23 16:00:04 +01:00
Rutger Helling 6352e99437
gnu/local.mk: Add emulators.scm.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add emulators.scm.
2018-02-22 09:16:19 +01:00
Tobias Geerinckx-Rice 79f0561f43
gnu: htop: Fix tree view.
* gnu/packages/patches/htop-fix-process-tree.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (htop)[source]: Use it.
2018-02-21 15:02:49 +01:00
Pjotr Prins 1b541c3e93
gnu: ldc: Update to 1.7.0.
Fixes recent bootstrap and updates ldc and package manager to match.

* gnu/packages/ldc.scm (ldc-bootstrap): Update to 0.17.4.
[properties]: Add max-slient-time.
[arguments]<#:phases>[patch-phobos]: Update patches (see below).
(ldc): Update to 1.7.0.
(ldc-beta): Delete variable.
[arguments]<#:phases>[patch-phobos]: Update patches (see below).
[arguments]<#:phases>[check]: Use invoke.
(rdmd): Update to 2.077.1.
(dub): Update to 1.7.2.
* gnu/local.mk (dist_patch_DATA): Remove "ldc-disable-tests.patch".
Add "ldc-bootstrap-disable-tests.patch".
Remove "ldc-1.1.0-disable-phobos-tests.patch".
Add "ldc-1.7.0-disable-phobos-tests.patch".
Remove "ldc-1.1.0-disable-dmd-tests.patch".

Co-Authored-By: Danny Milosavljevic <dannym@scratchpost.org>
2018-02-20 19:36:34 +01:00
Marius Bakke 5fa6b52a54
gnu: qemu: Update to 2.11.1.
* gnu/packages/patches/qemu-CVE-2017-15038.patch,
gnu/packages/patches/qemu-CVE-2017-15289.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/virtualization.scm (qemu): Update to 2.11.1
[source](patches): Remove.
2018-02-20 17:44:43 +01:00
Marius Bakke 7f69459aca
Merge branch 'master' into staging 2018-02-20 17:36:56 +01:00
Marius Bakke b1989c1250
gnu: freetype: Fix CVE-2018-6942.
* gnu/packages/patches/freetype-CVE-2018-6942.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/fontutils.scm (freetype)[replacement]: New field.
(freetype/fixed): New variable.
2018-02-20 16:26:20 +01:00
Marius Bakke f55ef78b5c
gnu: gtk+@2: Update to 2.24.32.
* gnu/packages/patches/gtk2-fix-failing-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gtk.scm (gtk+-2): Update to 2.24.32.
[source]: Remove 'gtk2-fix-failing-test.patch'.
2018-02-20 14:55:58 +01:00
Leo Famulari 2a5b5bfd84
gnu: libtasn1: Update to 4.13.
* gnu/packages/tls.scm (libtasn1): Update to 4.13.
[source]: Remove patches.
* gnu/packages/patches/libtasn1-CVE-2017-10790.patch,
gnu/packages/patches/libtasn1-CVE-2018-6003.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-02-19 21:50:10 -05:00
Alex Vong ad3c9f18da
gnu: tar: Update to 1.30.
* gnu/packages/base.scm (tar): Update to 1.30.
[source]: Remove 'tar-CVE-2016-6321.patch'.
* gnu/packages/patches/tar-CVE-2016-6321.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-02-19 21:50:09 -05:00
Tobias Geerinckx-Rice c3800f0b6e
gnu: lcms: Update to 2.9.
* gnu/packages/ghostscript.scm (lcms): Update to 2.9.
[source]: Remove patch.
* gnu/packages/patches/lcms-CVE-2016-10165.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-20 03:01:41 +01:00
okapi 2922852e86
gnu: Add gzdoom.
* gnu/packages/games.scm (gzdoom): New variable.
* gnu/packages/patches/gzdoom-search-in-installed-share.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-02-19 00:33:34 +01:00
Hartmut Goebel 431ff8bea3
gnu: kde-frameworks: Update to 5.42.0 resp. 5.42.1
Beside simple updating:
- Change all todo-comments for test-cases into "fixme" comments to make them
  easier to find.
- breeze-icons: Blacklist a test failing at build.kde.org, too.
- extra-cmake-modules: Patch out a vanised test-case.
- kfilemetadata: Can now run the test-suite uninstalled. Blacklist a failing
  test-case.
- kimageformats: No longer symlink plugins into ./bin for testing.
- ktexteditor: Remove now unused patch.
- plasma-framework: Add input kirigami
- sonnet: For testing set QT_QPA_PLATFORM=offscreen.

* gnu/packages/kde-frameworks.scm (attica, baloo, bluez-qt, kactivities,
  kactivities-stats, kapidox, karchive, kauth, kbookmarks, kcmutils, kcodecs,
  kcompletion, kconfig, kconfigwidgets, kcoreaddons, kcrash, kdbusaddons,
  kde-frameworkintegration, kdeclarative, kded, kdelibs4support,
  kdesignerplugin, kdesu, kdewebkit, kdnssd, kdoctools, kemoticons,
  kglobalaccel, kguiaddons, khtml, ki18n, kiconthemes, kidletime, kinit, kio,
  kirigami, kitemmodels, kitemviews, kjobwidgets, kjs, kjsembed, kmediaplayer,
  knewstuff, knotifications, knotifyconfig, kpackage, kparts, kpeople,
  kplotting, kpty, kross, krunner, kservice, ksyntaxhighlighting,
  ktextwidgets, kunitconversion, kwallet, kwayland, kwindowsystem, kxmlgui,
  kxmlrpcclient, modemmanager-qt, networkmanager-qt, oxygen-icons,
  prison, solid, threadweaver): Update to 5.42.0.
  (kwidgetsaddons): Update to 5.42.1.
  (breeze-icons): Update to 5.42.0. [#:phases]<disable-failing-test> New
  phase.
  (extra-cmake-modules): Update to 5.42.0.
  [#:phases]<post-5.42.0-release-fix>: New phase.
  (kfilemetadata): Update to 5.42.0. [#:phases]: No longer move check behind
  install. [#:phases]<check-setup> Remove. [#:phase]<disable-failing-test> New
  phase.
  (kimageformats): Update to 5.42.0. [#:phases]<check-setup>: No longer
  symlink plugins into ./bin.
  (ktesteditor)[source]: Remove patch.
  (plasma-framework)[inputs]: Add  kirigami
  (sonnet): Update to 5.42.0. [#:phases]<check-setup> New phase.
* gnu/packages/patches/ktexteditor-5.39.0-autotests-dependencies.patch:
  Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-18 19:21:35 +01:00
Hartmut Goebel 64f390a409
gnu: qtbase: Use the store paths for other packages and dynamically loaded libs.
Transfer the applicable NixOS patches as of 2018-01-19:

- Not adopted: We don't change the .cmake.in and .prf, but use config
  mechanisms provided by th Qt build system.

- src/corelib/tools/qtimezoneprivate_tz.cpp: Adopted patch: Use $TZDIR to
  search for time-zone data. Thus avoid depending on package "tzdata", which
  often introduces changes with near-immediate effects, so it's important to
  be able to update it fast.

- src/corelib/kernel/qcoreapplication.cpp: Not adopted: NixOS adds plugin
  paths derived from PATH. We do not need this, since we already have
  native-search-path QT_PLUGIN_PATH.

- src/network/kernel/qdnslookup_unix.cpp,
  src/network/kernel/qhostinfo_unix.cpp: Transferred: Use hard-coded path to
  libresolv.

- src/network/ssl/qsslcontext_openssl.cpp: Not adopted: NixOS changes a
  conditional compilation for Qt 5.9 (but leaves it unchanged for Qt 5.10) to
  fix compilation with libressl.  But Qt does not support libressl anway, see
  config.tests/openssl/openssl.cpp in qtbase 5.9.4.

- src/plugins/platforminputcontexts/compose/generator/qtablegenerator.cpp:
  Transferred: Use hard-coded path to libx11.

- src/plugins/platforms/xcb/gl_integrations/xcb_glx/qglxintegration.cpp:
  Transferred: Use hard-coded path to mess's libGL, no need for a fall-back.

- src/plugins/platforms/xcb/qxcbcursor.cpp: Transferred: Use hard-coded path
  to Xcursor.

- src/plugins/platformthemes/gtk3/main.cpp: Not adopted: NixOS changes
  $XDG_DATA_DIRS and $GIO_EXTRA_MODULES in the code. We already have a
  search-path-specification for this.

- src/testlib/qtestassert.h: Decided not to adopt this for guix.

* gnu/packages/patches/qtbase-use-TZDIR.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qt.scm (qtbase): Add comment. [source]: Use new patch.
  [arguments]<#:phases>'patch-paths': New phase.
2018-02-18 18:39:18 +01:00
Ludovic Courtès 3f3c0ab434
gnu: mailutils: Fix uninitialized memory bug.
This was causing segfaults in the MH test suite when building with
glibc 2.26 on x86_64.

* gnu/packages/patches/mailutils-uninitialized-memory.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mail.scm (mailutils)[source](patches, snippet): New
fields.
[native-inputs]: New field.
2018-02-18 00:48:17 +01:00
Ludovic Courtès d65930708f
gnu: gcc@4.9: Fix libsanitizer compilation with glibc 2.26.
* gnu/packages/patches/gcc-4.9-libsanitizer-fix.patch: New file.
* gnu/packages/gcc.scm (gcc-4.9)[source](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-18 00:48:16 +01:00
Ricardo Wurmus ff9d1a2f0c
Merge branch 'master' into core-updates 2018-02-18 00:39:25 +01:00
Marius Bakke 26176bee23
gnu: python-waitress: Update to 1.1.0.
* gnu/packages/patches/python-waitress-fix-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-waitress): Update to 1.1.0.
[source](patches): New field.
2018-02-17 20:49:39 +01:00
Ben Woodcroft bb3359ab8e
gnu: ruby-2.4.3: Update rubygems to 2.7.6.
This fixes the security issues described at
https://www.ruby-lang.org/en/news/2018/02/17/multiple-vulnerabilities-in-
rubygems/

* gnu/packages/patches/ruby-rubygems-276-for-ruby24.patch: New file.
* gnu/packages/ruby.scm (ruby-2.4.3)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-18 00:48:50 +10:00
Mark H Weaver 150062f190
Merge branch 'master' into core-updates 2018-02-16 13:14:26 -05:00
Danny Milosavljevic f6cccefed5
gnu: ghc: Make memory allocator decommit memory on Linux < 4.5.
* gnu/packages/patches/ghc-8.0-fall-back-to-madv_dontneed.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/haskell.scm (ghc-8): Use it.
2018-02-16 12:41:01 -05:00
Danny Milosavljevic a124e4258a
gnu: ghc: Make memory allocator decommit memory on Linux < 4.5.
* gnu/packages/patches/ghc-8.0-fall-back-to-madv_dontneed.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/haskell.scm (ghc-8): Use it.
2018-02-15 17:27:50 +01:00
Pierre Langlois 6ca15c9ef6
gnu: crypto++: Update to 6.0.0.
* gnu/packages/crypto.scm (crypto++): Update to 6.0.0.
* gnu/packages/patches/crypto++-fix-dos-in-asn.1-decoders.patch: Delete
file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-02-15 10:23:42 +01:00
Mark H Weaver 02843215d8
gnu: shepherd: 'herd status' now sorts the result.
Add a patch by Ludovic Courtès <ludo@gnu.org> from the upstream
shepherd repository to partially fix <https://bugs.gnu.org/30299>.

* gnu/packages/patches/shepherd-herd-status-sorted.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (shepherd)[source]: Add patch.
2018-02-14 03:42:02 -05:00
Mark H Weaver 288b8fd5e9
Merge branch 'master' into core-updates 2018-02-13 13:17:15 -05:00
Rutger Helling 6963305ce5
gnu: local.mk: Remove mpv patch lines.
* gnu/local.mk: Remove mpv CVE-2018-6360 patch lines.
2018-02-13 10:35:00 +01:00
Mark H Weaver a7fb298665
Merge branch 'master' into core-updates 2018-02-11 04:05:07 -05:00
Leo Famulari 31c7002b46
gnu: libtasn1: Fix CVE-2018-6003.
* gnu/packages/patches/libtasn1-CVE-2018-6003.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (libtasn1/fixed)[source]: Use it.
2018-02-10 23:01:56 -05:00
Leo Famulari 79cf105304
gnu: libtiff: Fix CVE-2017-{9935,11335,18013}.
* gnu/packages/patches/libtiff-CVE-2017-9935.patch,
gnu/packages/patches/libtiff-CVE-2017-11335.patch,
gnu/packages/patches/libtiff-CVE-2017-18013.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff)[replacement]: New field.
(libtiff/fixed): New variable.
2018-02-10 22:58:19 -05:00
Julien Lepiller 6d0368eb84
gnu: Add java-xerces.
* gnu/packages/java.scm (java-xerces): New variable.
* gnu/packages/patches/java-xerces-bootclasspath.patch: New file.
* gnu/packages/patches/java-xerces-build_dont_unzip.patch: New file.
* gnu/packages/patches/java-xerces-xjavac_taskdef.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
2018-02-10 19:04:04 +01:00
Oleg Pykhalov 61995dce50
gnu: emacs-browse-at-remote: Patch for GNU Cgit support.
* gnu/packages/patches/emacs-browse-at-remote-cgit-gnu.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/emacs.scm (emacs-browse-at-remote)[source](patches): Use it.
2018-02-09 22:15:21 +03:00
Pierre Langlois af414f34fb
gnu: clementine: Remove Spotify downloader.
Clementine has a button in the preference menu that allows downloading a
binary blob to add support for Spofify.  Let's remove this button.  It turns
out this is the only part of the code base that uses crypto++, let's remove
this dependency too.

* gnu/packages/music.scm (clementine)[arguments]: Remove crypto++ support. Set
HAVE_SPOTIFY_DOWNLOADER to FALSE.
[inputs]: Remove crypto++ input.
* gnu/packages/patches/clementine-remove-crypto++-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-02-09 13:32:08 -05:00
Marius Bakke 165c8b2adc
gnu: zziplib: Update to 0.13.68.
* gnu/packages/patches/zziplib-CVE-2017-5974.patch,
gnu/packages/patches/zziplib-CVE-2017-5975.patch,
gnu/packages/patches/zziplib-CVE-2017-5976.patch,
gnu/packages/patches/zziplib-CVE-2017-5978.patch,
gnu/packages/patches/zziplib-CVE-2017-5979.patch,
gnu/packages/patches/zziplib-CVE-2017-5981.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/compression.scm (zziplib): Update to 0.13.68.
[source](patches): Remove.
[arguments]: Remove #:parallel-tests?.  Set #:tests? #f.
2018-02-09 16:43:49 +01:00
Marius Bakke ce2cfcabfc
gnu: python-pandas: Update to 0.22.0.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/patches/python-pandas-skip-failing-tests.patch: Delete file.
* gnu/packages/python.scm (python-pandas): Update to 0.22.0.
[source](patches): Remove.
[native-inputs]: Add PYTHON-PYTEST and PYTHON-LXML.
[arguments]: Replace CHECK-PHASE with custom pytest invocation.
[home-page]: Use HTTPS.
2018-02-09 14:44:49 +01:00
Arun Isaac a76acfd3f5
gnu: services: Add wesnothd service.
* gnu/services/games.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Game Services): Document the service.
2018-02-09 14:55:17 +05:30
Mark H Weaver 110afddee8
gnu: icecat: Use system harfbuzz and graphite2 libraries.
* gnu/packages/patches/icecat-use-system-harfbuzz.patch,
gnu/packages/patches/icecat-use-system-graphite2.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patches.  Delete
"gfx/harfbuzz" and "gfx/graphite2" in the snippet.
[inputs]: Add harfbuzz and graphite2.
[arguments]: Add "--with-system-harfbuzz" and "--with-system-graphite2" to
configure-flags.
2018-02-09 01:53:07 -05:00
Mark H Weaver efe2a2833c
Merge branch 'master' into core-updates 2018-02-09 01:46:34 -05:00
Alex Vong e61da2e884
gnu: mpv: Fix CVE-2018-6360.
* gnu/packages/patches/mpv-CVE-2018-6360-1.patch,
gnu/packages/patches/mpv-CVE-2018-6360-2.patch,
gnu/packages/patches/mpv-CVE-2018-6360-3.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/video.scm (mpv)[source]: Use them.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-02-08 15:18:21 -05:00
Tobias Geerinckx-Rice f81b6e7703
gnu: libtirpc: Update to 1.0.2.
* gnu/packages/onc-rpc.scm (libtirpc): Update to 1.0.2.
[patches]: Remove patch for fixed CVE.
* gnu/packages/patches/libtirpc-CVE-2017-8779.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-08 18:21:08 +01:00
Tobias Geerinckx-Rice 906f1b48e2
gnu: luajit: Update to 2.1.0-beta3.
* gnu/packages/lua.scm (luajit): Update to 2.1.0-beta3.
[source]: Remove symlinks patch.
* gnu/packages/patches/luajit-symlinks.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-02-08 05:01:42 +01:00
Leo Famulari 0b18c0b0de
gnu: mupdf: Fix CVE-2017-17858.
* gnu/packages/patches/mupdf-CVE-2017-17858.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (mupdf)[source]: Use it.
2018-02-07 21:17:57 -05:00
Ludovic Courtès 71e789319c
gnu: hwloc: Add 2.0.0.
* gnu/packages/mpi.scm (hwloc-2.0): New variable.
* gnu/packages/patches/hwloc-tests-without-sysfs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-02-06 17:34:34 +01:00
Mathieu Othacehe 924b96db0a
gnu: gpsbabel: Update to 1.5.4 and fix build.
* gnu/packages/patches/gpsbabel-minizip.patch: New file.
* gnu/packages/patches/gpsbabel-qstring.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/gps.scm (gpsbabel): Update to 1.5.4,
[source]: add two previous patches to fix build,
[snippet]: remove "gpsbabel" directory excursion,
[arguments]: ditto.
2018-02-06 15:50:09 +01:00
Leo Famulari a630c64709
gnu: p7zip: Fix CVE-2017-17969.
* gnu/packages/patches/p7zip-CVE-2017-17969.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/compression.scm (p7zip)[source]: Use it.
2018-02-05 16:21:40 -05:00
Marius Bakke bee7bb315c
Merge branch 'master' into core-updates 2018-02-01 13:18:47 +01:00
Leo Famulari 547c4bd23c
gnu: transmission: Update to 2.93.
* gnu/packages/bittorrent.scm (transmission): Update to 2.93.
[source]: Update URL and remove patch.
* gnu/packages/patches/transmission-fix-dns-rebinding-vuln.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-31 19:21:51 -05:00
Adam Van Ymeren 51f887f33d
gnu: python-axolotl: Update to 0.1.39 and fix build.
python-axolotl has been failing since March,
https://hydra.gnu.org/job/gnu/master/python-axolotl-0.1.35.x86_64-linux

This also fixes the OMEMO and OTR plugins for Gajim work.

* gnu/packages/patches/python-axolotl-AES-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python-crypto.scm (python-axolotl): Upgrade to 0.1.39.
[source]: Use the patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-01-31 17:36:22 +01:00
Ludovic Courtès 6ec8a3cc95
gnu: Add Enki.
* gnu/packages/robotics.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-01-30 16:40:29 +01:00
Tobias Geerinckx-Rice b598965866
gnu: rsync: Update to 3.1.3.
* gnu/packages/rsync.scm (rsync): Update to 3.1.3.
[source]: Remove patches for fixed CVEs.
[properties]: Remove field.
* packages/patches/rsync-CVE-2017-16548.patch: Delete file.
* packages/patches/rsync-CVE-2017-17433.patch: Delete file.
* packages/patches/rsync-CVE-2017-17433-fix-tests.patch: Delete file.
* packages/patches/rsync-CVE-2017-17434-pt1.patch: Delete file.
* packages/patches/rsync-CVE-2017-17434-pt2.patch: Likewise.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-01-30 09:25:35 +01:00
Mark H Weaver b89d8a4271
Merge branch 'master' into core-updates 2018-01-26 00:15:26 -05:00
Tobias Geerinckx-Rice 218b94f3b8
gnu: reposurgeon: Update to 3.43.
* gnu/packages/version-control.scm (reposurgeon): Update to 3.43.
[source]: Add a patch needed to build the package.
[arguments]: Add ‘patch-inputs’ phase.
[native-inputs]: Replace docbook-xml-4.1.2 with the latest docbook-xml.
[inputs]: Add tzdata.
* gnu/packages/patches/reposurgeon-add-missing-docbook-files.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-01-26 00:09:19 +01:00
Leo Famulari 238f3a39a0
gnu: dovecot: Fix CVE-2017-15132.
* gnu/packages/patches/dovecot-CVE-2017-15132.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mail.scm (dovecot)[source]: Use it.
2018-01-25 13:37:19 -05:00
Ricardo Wurmus 7bf0170e9f
gnu: Update SELinux packages.
* gnu/packages/selinux.scm (libsepol): Update to 2.7, release 20170804.
[source]: Fetch from git.
(checkpolicy)[arguments]: Set LIBSEPOLA.
(libselinux)[arguments]: Likewise; remove build phase "patch-libsepol-path".
(python-sepolgen)[arguments]: Adjust directory name in "enter-dir".
(python-setools): Update to 4.1.1.
[source]: Fetch from git.
(policycoreutils)[source]: Remove patch.
[arguments]: Remove build phases "fix-glib-cflags",
"fix-linkage-with-libsepol", "fix-target-paths", and "wrap-python-tools".
[inputs]: Remove python-wrapper, python-sepolgen, python-setools, python-ipy,
libcap-ng, pcre, dbus, dbus-glib, and glib.
* gnu/packages/patches/policycoreutils-make-sepolicy-use-python3.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-25 00:36:57 +01:00
Ricardo Wurmus ca56021c26
gnu: Update SELinux packages.
* gnu/packages/selinux.scm (libsepol): Update to 2.7, release 20170804.
[source]: Fetch from git.
(checkpolicy)[arguments]: Set LIBSEPOLA.
(libselinux)[arguments]: Likewise; remove build phase "patch-libsepol-path".
(python-sepolgen)[arguments]: Adjust directory name in "enter-dir".
(python-setools): Update to 4.1.1.
[source]: Fetch from git.
(policycoreutils)[source]: Remove patch.
[arguments]: Remove build phases "fix-glib-cflags",
"fix-linkage-with-libsepol", "fix-target-paths", and "wrap-python-tools".
[inputs]: Remove python-wrapper, python-sepolgen, python-setools, python-ipy,
libcap-ng, pcre, dbus, dbus-glib, and glib.
* gnu/packages/patches/policycoreutils-make-sepolicy-use-python3.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-25 00:36:26 +01:00
Mark H Weaver 78dfc16139
Merge branch 'master' into core-updates 2018-01-24 06:23:33 -05:00
Mark H Weaver 52009dc3bd
gnu: icecat: Add more fixes from upstream mozilla-esr52.
Includes fixes for CVE-2018-5104, CVE-2018-5097, CVE-2018-5099, and the
remaining 7 out of 21 changesets for CVE-2018-5089.

* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from the
upstream mozilla-esr52 repository.  Remove the local spectre mitigation patch
in favor of the (identical) changeset from upstream.
* gnu/packages/patches/icecat-bug-1427870-spectre-mitigation.patch: Delete.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-24 05:59:01 -05:00
Mark H Weaver a102d359a6
Merge branch 'master' into core-updates 2018-01-23 17:01:07 -05:00
Leo Famulari c73a00a376
gnu: libsndfile: Fix CVE-2017-12562.
* gnu/packages/patches/libsndfile-CVE-2017-12562.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pulseaudio.scm (libsndfile)[replacement]: New field.
(libsndfile/fixed): New variable.
2018-01-23 15:25:32 -05:00
Fis Trivial 457fc22dd3
gnu: rtags: Fix the bundling issue.
* gnu/packages/patches/rtags-separate-rct.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/code.scm (rtags): Dependencies no longer bundled.
[source]: Use tarball release.  Use the patch to link rct.
Substitute corresponding headers.
[native-inputs]: Add new dependencies.
[inputs]: Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-01-23 10:43:37 +01:00
Fis Trivial a893dc2f48
gnu: rct: Add missing headers, enable RTTI.
* gnu/packages/patches/rct-add-missing-headers.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/cpp.scm (rct): Use the patch, enable RTTI.
[source]: Use the patch to add missing headers from installation.
[arguments]: Enable RTTI in configure-flags.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-01-23 10:28:27 +01:00
Kei Kebreau 75033216ea
gnu: clisp: Fix build with glibc 2.26.
* gnu/packages/patches/clisp-glibc-2.26.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/lisp.scm (clisp)[source]: Use it.
2018-01-20 21:48:47 -05:00
Mark H Weaver 8329cb53d3
gnu: Remove references to deleted patches.
This is a followup to commit e074a655dd.

* gnu/local.mk (dist_patch_DATA): Remove ninja-zero-mtime.patch and
node-test-http2-server-rst-stream.patch, which no longer exist.
2018-01-20 01:07:34 -05:00
Mark H Weaver e074a655dd
Merge branch 'master' into core-updates 2018-01-19 23:59:20 -05:00
Leo Famulari ccb5cac17b
gnu: libexif: Fix CVE-2016-6328.
* gnu/packages/patches/libexif-CVE-2016-6328.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/photo.scm (libexif)[source]: Use it.
2018-01-19 17:51:00 -08:00
Tobias Geerinckx-Rice 5bb12e1462
gnu: ninja: Update to 1.8.2.
* gnu/packages/ninja.scm (ninja): Update to 1.8.2.
[source]: Remove upstreamed patch.
[arguments]: Substitute INVOKE for SYSTEM*.  Use standard indentation.
* gnu/packages/patches/ninja-zero-mtime.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-19 13:19:33 +01:00
Mark H Weaver 846b8d7fa0
gnu: webkitgtk: Update to 2.18.5.
* gnu/packages/webkit.scm (webkitgtk): Update to 2.18.5.
[source]: Remove patch.
* gnu/packages/patches/webkitgtk-mitigate-spectre.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-01-18 07:24:15 -05:00