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Author SHA1 Message Date
Arun Isaac c17b079043
gnu: Add openttd-opensfx. 
* gnu/packages/games.scm (openttd-opensfx): New variable.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2017-09-22 08:04:32 -04:00
Arun Isaac 3c399e9b60
gnu: Add catcodec. 
* gnu/packages/game-development.scm (catcodec): New variable.

Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
 2017-09-22 08:04:24 -04:00
Ricardo Wurmus 9fc513ad10
gnu: Use xxd instead of vim. 
* gnu/packages/audio.scm (faust-2)[native-inputs]: Replace vim with xxd.
* gnu/packages/avr.scm (microscheme)[native-inputs]: Likewise.
* gnu/packages/bioinformatics.scm (star)[native-inputs]: Likewise.
* gnu/packages/disk.scm (dosfstools)[native-inputs]: Likewise.
* gnu/packages/package-management.scm (diffoscope)[inputs]: Likewise.
 2017-09-22 12:21:09 +02:00
Ricardo Wurmus b0a1d7ef7d
gnu: Add xxd. 
* gnu/packages/vim.scm (xxd): New variable.
 2017-09-22 12:21:09 +02:00
Mark H Weaver 0920205391
gnu: linux-libre: Update to 4.13.3. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.3.
(%linux-libre-hash): Update hash.
 2017-09-21 18:56:56 -04:00
Mark H Weaver e689192df5
gnu: linux-libre@4.9: Update to 4.9.51. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.51.
 2017-09-21 18:56:25 -04:00
Mark H Weaver b9ebf1da7a
gnu: linux-libre@4.1: Update to 4.1.44. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.44.
 2017-09-21 18:55:36 -04:00
Marius Bakke 9b0215deb9
gnu: libuv: Update to 1.14.1. 
* gnu/packages/libevent.scm (libuv): Update to 1.14.1.
[source]: Download from dist.libuv.org.
 2017-09-21 21:10:28 +02:00
Marius Bakke e0afc09de4
gnu: curl: Update to 7.55.1. 
* gnu/packages/patches/curl-bounds-check.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/curl.scm (curl): Update to 7.55.1.
[replacement]: Remove field.
[source]: Use '.xz' tarball.
(curl-7.55.0): Remove variable.
 2017-09-21 20:53:15 +02:00
Marius Bakke efa0ba499e
Merge branch 'master' into staging 2017-09-21 20:34:49 +02:00
Marius Bakke e2a95f8b16
gnu: vim: Update to 8.0.1130. 
* gnu/packages/vim.scm (vim): Update to 8.0.1130.
 2017-09-21 20:34:09 +02:00
Marius Bakke 595dcd48a9
gnu: bdb: Update to 6.2.32. 
* gnu/packages/databases.scm (bdb): Update to 6.2.32.
 2017-09-21 20:33:56 +02:00
Marius Bakke dfe0bac420
gnu: lout: Revert changes from dc1d3cdef7. 
This caused `make` to error out like this:

ERROR: In procedure primitive-load-path:
ERROR: In procedure read_inner_expression: gnu/packages/lout.scm:31:12: unexpected ")"

* gnu/packages/lout.scm (lout)[arguments]: Don't use 'modify-phases'.
 2017-09-21 20:26:23 +02:00
Marius Bakke abe97a58be
gnu: dlib: Update to 19.7. 
* gnu/packages/machine-learning.scm (dlib): Update to 19.7.
[arguments]: Add #:configure-flags.  Remove redundant CXXFLAGS from 'check' phase.
 2017-09-21 20:08:02 +02:00
Ricardo Wurmus 0cdb6ab499
gnu: emacs: Update to 25.3. 
* gnu/packages/patches/emacs-unsafe-enriched-mode-translations.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/emacs.scm (emacs): Update to 25.3.
[source]: Remove obsolete patch.
 2017-09-21 16:46:20 +02:00
Kei Kebreau dc1d3cdef7
gnu: Use 'modify-phases' syntax. 
* gnu/packages/admin.scm (mingetty, clusterssh, wpa-supplicant-minimal,
wpa-supplicant, wakelan, acpica, tree, direvent, dstat)[arguments]: Use
'modify-phases' syntax.
* gnu/packages/algebra.scm (arb)[arguments]: Likewise.
* gnu/packages/apr.scm (apr-util)[arguments]: Likewise.
* gnu/packages/audio.scm (clalsadrv, fluidsynth, faad2, lv2-mda-piano,
lv2-mda-epiano, timidity++, vamp, soundtouch, portaudio, rsound,
zita-convolver, zita-alsa-pcmi)[arguments]: Likewise.
* gnu/packages/backup.scm (rdup, btar)[arguments]: Likewise.
* gnu/packages/bioinformatics.scm (bedops, bwa, crossmap, express,
flexbar, grit, hisat, ngs-sdk, subread)[arguments]: Likewise.
* gnu/packages/bittorrent.scm (transmission)[arguments]: Likewise.
* gnu/packages/cdrom.scm (cd-discid)[arguments]: Likewise.
* gnu/packages/compression.scm (sharutils)[arguments]: Likewise.
* gnu/packages/conky.scm (conky)[arguments]: Likewise.
* gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Likewise.
* gnu/packages/debug.scm (delta, c-reduce)[arguments]: Likewise.
* gnu/packages/display-managers.scm (slim)[arguments]: Likewise.
* gnu/packages/dns.scm (dnsmasq)[arguments]: Likewise.
* gnu/packages/emacs.scm (geiser, emacs-wget, bbdb)[arguments]: Likewise.
* gnu/packages/engineering.scm (pcb)[arguments]: Likewise.
* gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Likewise.
* gnu/packages/flashing-tools.scm (flashrom)[arguments]: Likewise.
* gnu/packages/fltk.scm (fltk)[arguments]: Likewise.
* gnu/packages/freedesktop.scm (python-pyxdg)[arguments]: Likewise.
* gnu/packages/gd.scm (perl-gd)[arguments]: Likewise.
* gnu/packages/gkrellm.scm (gkrellm)[arguments]: Likewise.
* gnu/packages/glib.scm (glibmm)[arguments]: Likewise.
* gnu/packages/gl.scm (glew)[arguments]: Likewise.
* gnu/packages/gnome.scm (icon-naming-utils, orbit2, libbonobo, gnome-vfs,
libgnome, libbonoboui, goffice-0.8, dconf)[arguments]: Likewise.
* gnu/packages/gprolog.scm (gprolog)[arguments]: Likewise.
* gnu/packages/gps.scm (gpscorrelate)[arguments]: Likewise.
* gnu/packages/graphics.scm (agg)[arguments]: Likewise.
* gnu/packages/gtk.scm (ganv, girara, gtksourceview-2, guile-present,
python2-pycairo)[arguments]: Likewise.
* gnu/packages/guile.scm (guile-1.8)[arguments]: Likewise.
* gnu/packages/guile-wm.scm (guile-wm)[arguments]: Likewise.
* gnu/packages/hugs.scm (hugs)[arguments]: Likewise.
* gnu/packages/hurd.scm (gnumach-headers, hurd-headers, hurd-minimal)
[arguments]: Likewise.
* gnu/packages/image-viewers.scm (feh, sxiv)[arguments]: Likewise.
* gnu/packages/libcanberra.scm (libcanberra)[arguments]: Likewise.
* gnu/packages/linux.scm (bridge-utils, iw, fuse, unionfs-fuse/static,
lm-sensors, i2c-tools, xsensors, perf, mdadm, libaio, module-init-tools)
[arguments]: Likewise.
* gnu/packages/lisp.scm (ccl)[arguments]: Likewise.
* gnu/packages/lout.scm (lout)[arguments]: Likewise.
* gnu/packages/lua.scm (luajit)[arguments]: Likewise.
* gnu/packages/machine-learning.scm (shogun)[arguments]: Likewise.
* gnu/packages/mail.scm (exim)[arguments]: Likewise.
* gnu/packages/man.scm (man-pages, txt2man)[arguments]: Likewise.
* gnu/packages/maths.scm (lapack, superlu-dist, openlibm, openspecfun)
[arguments]: Likewise.
* gnu/packages/messaging.scm (bitlbee)[arguments]: Likewise.
* gnu/packages/mp3.scm (libmad, id3lib, mp3info)[arguments]: Likewise.
* gnu/packages/music.scm (solfege)[arguments]: Likewise.
* gnu/packages/noweb.scm (noweb)[arguments]: Likewise.
* gnu/packages/patchutils.scm (patchutils, quilt, colordiff)[arguments]:
Likewise.
* gnu/packages/pdf.scm (xpdf, zathura-cb, zathura-ps, zathura-djvu,
zathura-pdf-poppler, zathura, podofo, fbida)[arguments]: Likewise.
* gnu/packages/perl.scm (perl-file-list, perl-test-harness)[arguments]:
Likewise.
* gnu/packages/photo.scm (gphoto2)[arguments]: Likewise.
* gnu/packages/popt.scm (popt)[arguments]: Likewise.
* gnu/packages/pretty-print.scm (source-highlight, astyle)[arguments]:
Likewise.
* gnu/packages/pumpio.scm (pumpa)[arguments]: Likewise.
* gnu/packages/python.scm (python-passlib, python-pycrypto, python2-empy,
python-sqlalchemy, python-docopt)[arguments]: Likewise.
* gnu/packages/rdf.scm (lrdf)[arguments]: Likewise.
* gnu/packages/regex.scm (tre)[arguments]: Likewise.
* gnu/packages/rrdtool.scm (rrdtool)[arguments]: Likewise.
* gnu/packages/ruby.scm (ruby-2.1, ruby-1.8)[arguments]: Likewise.
* gnu/packages/sawfish.scm (sawfish)[arguments]: Likewise.
* gnu/packages/scheme.scm (racket)[arguments]: Likewise.
* gnu/packages/sdl.scm (guile-sdl)[arguments]: Likewise.
* gnu/packages/serveez.scm (serveez)[arguments]: Likewise.
* gnu/packages/skribilo.scm (skribilo)[arguments]: Likewise.
* gnu/packages/smalltalk.scm (smalltalk)[arguments]: Likewise.
* gnu/packages/suckless.scm (dmenu, slock)[arguments]: Likewise.
* gnu/packages/tcl.scm (expect)[arguments]: Likewise.
* gnu/packages/telephony.scm (commoncpp)[arguments]: Likewise.
* gnu/packages/textutils.scm (recode, libgtextutils)[arguments]:
Likewise.
* gnu/packages/time.scm (time)[arguments]: Likewise.
* gnu/packages/tor.scm (privoxy)[arguments]: Likewise.
* gnu/packages/uucp.scm (uucp)[arguments]: Likewise.
* gnu/packages/video.scm (libdvdnav-4)[arguments]: Likewise.
* gnu/packages/web-browsers.scm (lynx)[arguments]: Likewise.
* gnu/packages/web.scm (tinyproxy)[arguments]: Likewise.
* gnu/packages/wicd.scm (wicd)[arguments]: Likewise.
* gnu/packages/wm.scm (bspwm)[arguments]: Likewise.
* gnu/packages/xdisorg.scm (sxhkd, xcape)[arguments]: Likewise.
* gnu/packages/xfce.scm (xfconf)[arguments]: Likewise.
* gnu/packages/xfig.scm (transfig)[arguments]: Likewise.
* gnu/packages/xorg.scm (imake)[arguments]: Likewise.
 2017-09-20 20:58:04 -04:00
Stefan Reichör 80d9941c95
gnu: Add vcsh. 
* gnu/packages/version-control.scm (vcsh): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-20 23:02:28 +02:00
Paul Garlick a836e9f509
gnu: openfoam: Fix typo in Note. 
* gnu/packages/simulation.scm (openfoam): Put capital 'D' in 'pitzDaily'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-20 23:02:28 +02:00
Ludovic Courtès f2b96b3a1c
gnu: Add network-manager-openvpn. 
* gnu/packages/gnome.scm (network-manager-openvpn): New variable.
 2017-09-20 23:02:28 +02:00
Marius Bakke a9bd50e352
gnu: bluez: Remove leftover patch. 
This is a follow-up to commit 164fccea7e.

* gnu/packages/patches/bluez-CVE-2017-1000250.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-09-20 20:50:00 +02:00
Marius Bakke 3d695e6ae4
gnu: cups-filters: Update to 1.17.7. 
* gnu/packages/cups.scm (cups-filters): Update to 1.17.7.
 2017-09-20 20:20:19 +02:00
Marius Bakke df7effa299
gnu: poppler: Update to 0.59.0. 
* gnu/packages/pdf.scm (poppler): Update to 0.59.0.
 2017-09-20 20:00:07 +02:00
Marius Bakke cb6392698a
gnu: mesa: Update to 17.2.1. 
* gnu/packages/gl.scm (mesa): Update to 17.2.1.
[inputs]: Add WAYLAND-PROTOCOLS.
* gnu/packages/patches/mesa-skip-disk-cache-test.patch: Adjust context.
 2017-09-20 19:55:34 +02:00
Marius Bakke 7c9b87600b
gnu: harfbuzz: Update to 1.5.1. 
* gnu/packages/gtk.scm (harfbuzz): Update to 1.5.1.
 2017-09-20 19:47:15 +02:00
Tobias Geerinckx-Rice 3b5870aac3
gnu: virt-manager: Update to 1.4.3. 
* gnu/packages/virtualization.scm (virt-manager): Update to 1.4.3.
 2017-09-20 19:29:28 +02:00
Tobias Geerinckx-Rice e8d5e32fbf
gnu: gnuastro: Update to 0.4. 
* gnu/packages/astronomy.scm (gnuastro): Update to 0.4.
 2017-09-20 19:29:28 +02:00
Tobias Geerinckx-Rice d4442eaf22
gnu: wcslib: Use HTTPS home page. 
* gnu/packages/astronomy.scm (wcslib)[home-page]: Use HTTPS.
 2017-09-20 19:28:59 +02:00
Tobias Geerinckx-Rice 7651a4b2ec
gnu: wcslib: Update to 5.17. 
* gnu/packages/astronomy.scm (wcslib): Update to 5.17.
 2017-09-20 19:28:59 +02:00
Marius Bakke 6345cefa7f
gnu: gtk+: Update to 3.22.21. 
* gnu/packages/gtk.scm (gtk+): Update to 3.22.21.
 2017-09-20 19:16:54 +02:00
Marius Bakke a87f425ca4
gnu: ruby: Remove graft for 2.4.2. 
* gnu/packages/ruby.scm (ruby): Update to 2.4.2.
[replacement]: Remove field.
(ruby-2.4.2): Remove variable.
 2017-09-20 19:13:25 +02:00
Marius Bakke b093be236e
gnu: gd: Remove graft for 2.2.5. 
* gnu/packages/gd.scm (gd): Update to 2.2.5.
[source]: Remove obsolete patches.
[replacement]: Remove field.
(gd-2.2.5): Remove variable.
* gnu/packages/patches/gd-fix-gd2-read-test.patch,
gnu/packages/patches/gd-php-73968-Fix-109-XBM-reading.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove patches.
* gnu/packages/php.scm (php)[inputs]: Replace GD-2.2.5 with GD.
 2017-09-20 19:06:38 +02:00
Marius Bakke 171bcdf7ba
gnu: gdk-pixbuf: Remove graft for 2.36.10. 
* gnu/packages/gtk.scm (gdk-pixbuf): Update to 2.36.10.
[replacement]: Remove field.
(gdk-pixbuf+svg)[replacement]: Likewise.
(gdk-pixbuf-2.36.10, gdk-pixbuf+svg-2.36.10): Remove variables.
 2017-09-20 18:57:39 +02:00
Marius Bakke 164fccea7e
gnu: bluez: Update to 5.47. 
* gnu/packages/linux.scm (bluez): Update to 5.47.
[replacement]: Remove field.
(bluez/fixed): Remove variable.
 2017-09-20 18:56:03 +02:00
Marius Bakke 58366883f2
Merge branch 'master' into staging 2017-09-20 18:49:26 +02:00
Marius Bakke 9a1c4a981b
gnu: btrfs-progs: Install bash completions. 
* gnu/packages/linux.scm (btrfs-progs)[arguments]: Add
'install-bash-completion' phase.
 2017-09-20 17:15:37 +02:00
Marius Bakke ad0f92d028
gnu: python-pyjwt: Update to 1.5.3. 
* gnu/packages/python.scm (python-pyjwt): Update to 1.5.3.
 2017-09-20 17:06:14 +02:00
Marius Bakke 15d507dbee
gnu: samba: Update to 4.6.8. 
* gnu/packages/samba.scm (samba): Update to 4.6.8.
 2017-09-20 17:03:08 +02:00
Marius Bakke 40f1694778
gnu: nss, nss-certs: Update to 3.33. 
* gnu/packages/gnuzilla.scm (nss): Update to 3.33.
* gnu/packages/certs.scm (nss-certs): Likewise.
 2017-09-20 16:58:04 +02:00
Marius Bakke ad7a73a9d7
gnu: nspr: Update to 4.17. 
* gnu/packages/gnuzilla.scm (nspr): Update to 4.17.
 2017-09-20 16:57:40 +02:00
Marius Bakke 1c9c81cfda
gnu: gnupg: Update to 2.2.1. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.1.
 2017-09-20 16:57:16 +02:00
Andy Wingo c68c201fdd
gnu: xorg-server: Prefer intel driver only for older GPUs. 
* gnu/packages/xorg.scm (xorg-server): Add patch to only prefer the intel
  driver for older Intel GPUs.

Signed-off-by: Andy Wingo <wingo@igalia.com>
 2017-09-20 15:40:31 +02:00
Andy Wingo 60871ffdb8
gnu: xf86-video-intel: Update to latest Git. 
* gnu/packages/xorg.scm (xf86-video-intel): Update to latest Git.

Signed-off-by: Andy Wingo <wingo@igalia.com>
 2017-09-20 15:40:31 +02:00
Andy Wingo 3511c78020
gnu: Add cheese. 
* gnu/packages/gnome.scm (cheese): New public variable.

Signed-off-by: Andy Wingo <wingo@igalia.com>
 2017-09-20 15:40:31 +02:00
Andy Wingo d831d49db9
gnu: Add gnome-video-effects. 
* gnu/packages/gnome.scm (gnome-video-effects): New public variable.

Signed-off-by: Andy Wingo <wingo@igalia.com>
 2017-09-20 15:40:13 +02:00
Oleg Pykhalov 46f5ae0b35
gnu: emacs-skewer-mode: Include html and js files. 
* gnu/packages/emacs.scm (emacs-skewer-mode): Include html and js files.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2017-09-19 19:46:31 +03:00
Efraim Flashner ce133cb737
gnu: efl: Update to 1.20.4. 
* gnu/packages/enlightenment.scm (efl): Update to 1.20.4.
 2017-09-19 19:30:37 +03:00
Ludovic Courtès 3daea4f12b
gnu: cuirass: Update development snapshot. 
* gnu/packages/ci.scm (cuirass): Update to commit 87ad259.
 2017-09-19 12:19:15 +02:00
Eric Bavier d209ce434f
gnu: qutebrowser: Update to 0.11.0. 
* gnu/packages/web-browsers.scm (qutebrowser): Update to 0.11.0.
 2017-09-19 00:03:40 -05:00
Marius Bakke 2cb396ee7b
gnu: gstreamer: Update to 1.12.3. 
* gnu/packages/gstreamer.scm (gstreamer, gst-plugins-base, gst-plugins-good,
gst-plugins-bad, gst-plugins-ugly, gst-libav, python-gst): Update to 1.12.3.
 2017-09-18 22:47:47 +02:00
Marius Bakke ad472397bc
gnu: gdk-pixbuf: Replace with 2.36.10. 
Fixes CVE-2017-2862, CVE-2017-2870 and CVE-2017-6311.

* gnu/packages/gtk.scm (gdk-pixbuf, gdk-pixbuf+svg)[replacement]: New field.
(gdk-pixbuf-2.36.10, gdk-pixbuf+svg-2.36.10): New variables.
 2017-09-18 22:27:40 +02:00
Marius Bakke dc4ffa6766
gnu: freexl: Update to 1.0.4 [fixes CVE-2017-2923 and CVE-2017-2924]. 
* gnu/packages/xml.scm (freexl): Update to 1.0.4.
 2017-09-18 22:27:40 +02:00
Efraim Flashner bbcfd80a20
gnu: newsbeuter: Fix CVE-2017-14500. 
* gnu/packages/syndication.scm (newsbeuter)[source]: Add patch.
* gnu/packages/patches/newsbeuter-CVE-2017-14500.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-09-18 22:38:56 +03:00
Tobias Geerinckx-Rice f53e4ada03
gnu: tor: Update to 0.3.0.11 [fixes CVE-2017-0380]. 
* gnu/packages/tor.scm (tor): Update to 0.3.0.11.
 2017-09-18 21:06:42 +02:00
Tobias Geerinckx-Rice d5b0a8e50a
gnu: youtube-dl: Update to 2017.09.15. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.09.15.
 2017-09-18 17:31:44 +02:00
Ludovic Courtès e14ab0ad07
gnu: httpd: Patch "options bleed" [fixes CVE-2017-9798]. 
* gnu/packages/patches/httpd-CVE-2017-9798.patch: New file.
* gnu/packages/web.scm (httpd)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-09-18 15:44:52 +02:00
Ricardo Wurmus ebfd6a718a
gnu: r-rcas: Add missing inputs. 
* gnu/packages/bioinformatics.scm (r-rcas)[propagated-inputs]: Add r-pbapply.
 2017-09-18 14:23:03 +02:00
Ricardo Wurmus 65eb1c4a28
gnu: r-energy: Update to 1.7-2. 
* gnu/packages/cran.scm (r-energy): Update to 1.7-2.
 2017-09-18 14:23:03 +02:00
Ricardo Wurmus 2c67f96b1b
gnu: r-glmnet: Update to 2.0-12. 
* gnu/packages/statistics.scm (r-glmnet): Update to 2.0-12.
 2017-09-18 14:23:03 +02:00
Ricardo Wurmus 0b2fc9836b
gnu: r-lambda-r: Update to 1.2. 
* gnu/packages/statistics.scm (r-lambda-r): Update to 1.2.
 2017-09-18 14:23:03 +02:00
Ricardo Wurmus 9f14fffea6
gnu: r-gridextra: Update to 2.3. 
* gnu/packages/statistics.scm (r-gridextra): Update to 2.3.
 2017-09-18 14:23:02 +02:00
Ricardo Wurmus 37c6a738f3
gnu: r-dplyr: Update to 0.7.3. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.3.
 2017-09-18 14:23:02 +02:00
Ricardo Wurmus b0c8cba485
gnu: r-crayon: Update to 1.3.4. 
* gnu/packages/statistics.scm (r-crayon): Update to 1.3.4.
 2017-09-18 14:23:02 +02:00
Ricardo Wurmus ea008095c3
gnu: r-svglite: Update to 1.2.1. 
* gnu/packages/statistics.scm (r-svglite): Update to 1.2.1.
 2017-09-18 14:23:02 +02:00
Ricardo Wurmus 7904531e5b
gnu: r-mgcv: Update to 1.8-21. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-21.
 2017-09-18 14:23:02 +02:00
Ricardo Wurmus d82937fbe0
gnu: r-rcas: Update to 1.3.4. 
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.3.4.
 2017-09-18 11:33:26 +02:00
Ricardo Wurmus d9c65e5a9c
gnu: r-caret: Update to 6.0-77. 
* gnu/packages/statistics.scm (r-caret): Update to 6.0-77.
[propagated-inputs]: Remove r-car; add r-recipes and r-withr.
 2017-09-18 11:33:26 +02:00
Ricardo Wurmus 9272144a88
gnu: r-rstudioapi: Update to 0.7. 
* gnu/packages/statistics.scm (r-rstudioapi): Update to 0.7.
 2017-09-18 11:33:26 +02:00
Ricardo Wurmus 0dc3b4d41e
gnu: r-openssl: Update to 0.9.7. 
* gnu/packages/statistics.scm (r-openssl): Update to 0.9.7.
[inputs]: Replace openssl with libressl.
 2017-09-18 11:33:25 +02:00
Ricardo Wurmus ba4527ab94
gnu: Add r-recipes. 
* gnu/packages/cran.scm (r-recipes): New variable.
 2017-09-18 11:33:25 +02:00
Ricardo Wurmus 6c3d42d613
gnu: Add r-ipred. 
* gnu/packages/cran.scm (r-ipred): New variable.
 2017-09-18 11:33:25 +02:00
Ricardo Wurmus 649cf27c01
gnu: Add r-rcpproll. 
* gnu/packages/cran.scm (r-rcpproll): New variable.
 2017-09-18 11:33:25 +02:00
Ricardo Wurmus 5a87093fd5
gnu: Add r-gower. 
* gnu/packages/cran.scm (r-gower): New variable.
 2017-09-18 11:33:25 +02:00
Ricardo Wurmus f57b883ea3
gnu: Add r-ddalpha. 
* gnu/packages/cran.scm (r-ddalpha): New variable.
 2017-09-18 11:33:25 +02:00
Ricardo Wurmus 1b663184eb
gnu: Add r-timedate. 
* gnu/packages/cran.scm (r-timedate): New variable.
 2017-09-18 11:33:24 +02:00
Ricardo Wurmus b561f5636f
gnu: Add r-dimred. 
* gnu/packages/cran.scm (r-dimred): New variable.
 2017-09-18 11:33:24 +02:00
Ricardo Wurmus 9dd707f03b
gnu: Add r-prodlim. 
* gnu/packages/cran.scm (r-prodlim): New variable.
 2017-09-18 11:33:24 +02:00
Ricardo Wurmus d26b7c1bfc
gnu: Add r-drr. 
* gnu/packages/cran.scm (r-drr): New variable.
 2017-09-18 11:33:24 +02:00
Ricardo Wurmus 797e1dfbf2
gnu: Add r-lava. 
* gnu/packages/cran.scm (r-lava): New variable.
 2017-09-18 11:33:24 +02:00
Ricardo Wurmus f97ce81575
gnu: Add r-cvst. 
* gnu/packages/cran.scm (r-cvst): New variable.
 2017-09-18 11:33:24 +02:00
ng0 851cb6dd39
gnu: hicolor-icon-theme: Update to 0.17. 
* gnu/packages/gnome.scm (hicolor-icon-theme): Update to 0.17.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2017-09-18 06:26:56 +01:00
Efraim Flashner 9a6f5bbc0f
gnu: blender: Update to 2.79. 
* gnu/packages/graphics.scm (blender): Update to 2.79.
[source]: Use https.
[home-page]: Same.
 2017-09-18 06:36:38 +03:00
Nicolas Goaziou 9c1b37928d
gnu: emacs-org: Update to 20170917. 
* gnu/packages/emacs.scm (emacs-org): Update to 20170917, aka Org 9.1.1.
 2017-09-17 23:32:29 +02:00
Efraim Flashner ce27857f71
gnu: binutils: Fix security issues. 
* gnu/packages/base.scm (binutils)[replacement]: New field.
(binutils/fixed): New variable.
* gnu/packages/commencement.scm (binutils-boot0, binutils-final): Use
'package/inherit' to correctly use replacement binutils.
 2017-09-17 22:45:21 +03:00
Marius Bakke 881006b65c
gnu: certbot: Fix build with python-pyopenssl >= 17.3.0. 
* gnu/packages/patches/python-acme-dont-use-openssl-rand.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/tls.scm (python-acme)[source]: Use it.
 2017-09-17 18:50:00 +02:00
Marius Bakke 0c19c0f272
gnu: python-pyopenssl: Update to 17.3.0. 
* gnu/packages/python.scm (python-pyopenssl): Update to 17.3.0.
 2017-09-17 17:14:13 +02:00
Marius Bakke f2cc1b3136
gnu: lftp: Update to 4.8.1. 
* gnu/packages/ftp.scm (lftp): Update to 4.8.1.
 2017-09-17 17:14:13 +02:00
Marius Bakke 4c7ad0bc6c
gnu: jasper: Update to 2.0.14. 
* gnu/packages/image.scm (jasper): Update to 2.0.14.
 2017-09-17 17:14:12 +02:00
Marius Bakke 84023d2fa4
gnu: xf86-video-ati: Update to 7.10.0. 
* gnu/packages/xorg.scm (xf86-video-ati): Update to 7.10.0.
 2017-09-17 17:14:12 +02:00
Marius Bakke 6b192837e0
gnu: xf86-input-libinput: Update to 0.26.0. 
* gnu/packages/xorg.scm (xf86-input-libinput): Update to 0.26.0.
 2017-09-17 17:14:12 +02:00
Marius Bakke 273027da47
gnu: strace: Update to 4.19. 
* gnu/packages/linux.scm (strace): Update to 4.19.
 2017-09-17 15:15:45 +02:00
Ben Woodcroft 86805c1ba3
gnu: ruby-2.2: Update to 2.2.8. Fix CVE-2017-{0898,10784,14033,14064}. 
* gnu/packages/ruby.scm (ruby-2.2): Update to 2.2.8.
[source]: Remove patch.
* gnu/packages/patches/ruby-2.2.7-rubygems-2613-ruby22.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-09-17 20:08:48 +10:00
Ben Woodcroft c351e8cea5
gnu: ruby-2.3: Update to 2.3.5. Fix CVE-2017-{0898,10784,14033,14064}. 
* gnu/packages/ruby.scm (ruby-2.3): Update to 2.3.5.
[source]: Remove patch.
* gnu/packages/patches/ruby-2.3.4-rubygems-2613-ruby23.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-09-17 20:08:48 +10:00
Ben Woodcroft 312e8a9993
ruby: Update replacement to 2.4.2. Fix CVE-2017-{0898,10784,14033,14064}. 
* gnu/packages/ruby.scm (ruby): Update replacement to 2.4.2.
(ruby-2.4.1): Rename to ...
(ruby-2.4.2): ... this.
[source]: Remove patches.
* gnu/packages/patches/ruby-rubygems-2612-ruby24.patch,
gnu/packages/patches/ruby-rubygems-2613-ruby24.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2017-09-17 20:08:48 +10:00
Efraim Flashner 0329f6f76c
gnu: efl: Hardcode libcurl path. 
* gnu/packages/enlightenment.scm (efl)[arguments]: Hardcode the location
of libcurl.so.
 2017-09-17 13:01:50 +03:00
Efraim Flashner b6598237f2
gnu: openfoam: Fix typo. 
* gnu/packages/simulation.scm (openfoam)[description]: Add a period to
the end of the sentence.
 2017-09-17 10:14:17 +03:00
Efraim Flashner 5fb17ed92e
gnu: owncloud-client: Update to 2.3.3. 
* gnu/packages/sync.scm (owncloud-client): Update to 2.3.3.
 2017-09-17 10:14:14 +03:00
rennes ea8afaf3f1
gnu: bluefish: Update to 2.2.10. 
* gnu/packages/gnome.scm (bluefish): Update to 2.2.10.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2017-09-17 14:13:24 +08:00
Ben Woodcroft da1f7a9e16
gnu: python-orator: Move to (gnu packages databases). 
* gnu/packages/python.scm: Remove (gnu packages time) import.
(python-orator, python2-orator): Move from here ...
* gnu/packages/databases.scm: ... to here.
 2017-09-17 11:07:46 +10:00
Ben Woodcroft 77e5c37032
gnu: python-orator: Update to 0.9.7. 
* gnu/packages/python.scm (python-orator, python2-orator): Update to 0.9.7.
[arguments]: Enable tests.  Loosen dependency requirements.
[propagated-inputs]: Remove python-arrow.  Add python-backpack,
python-pendulum, python-pygments, python-six.
(python2-orator)[propagated-inputs]: Also remove python2-ipaddress.
 2017-09-17 11:05:33 +10:00
Ben Woodcroft 00c7888241
gnu: python-pygments: Update to 2.2.0. 
* gnu/packages/databases.scm (python-pygments): Update to 2.2.0.
 2017-09-17 11:05:29 +10:00
Ben Woodcroft 5eebe8dcf7
gnu: python-cleo: Update to 0.6.1. 
* gnu/packages/databases.scm (python-cleo): Update to 0.6.1.
[native-inputs]: Add python-pytest-mock.
[propagated-inputs]: Add python-backpack, python-pastel.  Remove
python-psutil.
 2017-09-17 11:05:17 +10:00
Ben Woodcroft f76d56d286
gnu: Add python-pastel. 
* gnu/packages/graphics.scm (python-pastel): New variable.
 2017-09-17 11:04:14 +10:00
Ben Woodcroft 963926bc78
gnu: python-pyaml: Update to 17.7.2. 
* gnu/packages/databases.scm (python-pyaml): Update to 17.7.2.
 2017-09-17 11:03:51 +10:00
Ben Woodcroft 89c3eaaa98
gnu: Add python-pendulum. 
* gnu/packages/time.scm (python-pendulum): New variable.
 2017-09-17 11:03:46 +10:00
Ben Woodcroft 5d20e1ecaf
gnu: Add python-pytzdata. 
* gnu/packages/time.scm (python-pytzdata): New variable.
 2017-09-17 11:02:23 +10:00
Ben Woodcroft 04fb4516f4
gnu: Add python-backpack. 
* gnu/packages/python.scm (python-backpack): New variable.
 2017-09-17 11:00:56 +10:00
Ludovic Courtès 4db733e77d
gnu: Add hunspell-dict-fr{,moderne,reforme1990,toutesvariantes}. 
* gnu/packages/libreoffice.scm (dicollecte-french-dictionary): New
procedure.
(define-french-dictionary): New macro.
(hunspell-dict-fr-classique)
(hunspell-dict-fr-moderne)
(hunspell-dict-fr-réforme-1990)
(hunspell-dict-fr-toutes-variantes): New variables.
 2017-09-16 23:27:38 +02:00
Ludovic Courtès 31daf8931b
gnu: hunspell: Specify 'DICPATH' variable. 
* gnu/packages/libreoffice.scm (hunspell)[native-search-paths]: New
variable.
 2017-09-16 23:27:38 +02:00
Tobias Geerinckx-Rice 1d704c89d6
gnu: man-pages: Update to 4.13. 
* gnu/packages/man.scm (man-pages): Update to 4.13.
 2017-09-16 18:49:34 +02:00
Peter Mikkelsen dab666cd8d
gnu: Add meson-for-build. 
* gnu/packages/build-tools.scm (meson-for-build): New variable.
* gnu/packages/patches/meson-for-build-rpath.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-16 00:03:53 +02:00
Peter Mikkelsen 67f8ba118e
gnu: meson: Update to 0.42.0. 
* gnu/packages/build-tools.scm (meson): Update to 0.42.0.
  [propagated-inputs]: Add python.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-16 00:03:53 +02:00
Oleg Pykhalov 2175a42750
gnu: emacs-markdown-mode: Update to 2.3. 
* gnu/packages/emacs.scm (emacs-markdown-mode): Update to 2.3.

Signed-off-by: Christopher Baines <mail@cbaines.net>
 2017-09-15 22:16:28 +01:00
Mark H Weaver a54bf725fc
gnu: webkitgtk: Update to 2.18.0. 
* gnu/packages/webkit.scm (webkitgtk): Update to 2.18.0.
[arguments]: Add -DUSE_GSTREAMER_GL=OFF to configure-flags.
[inputs]: Add libtasn1.
 2017-09-15 13:12:38 -04:00
Paul Garlick 8f21aa22bf
gnu: Add openfoam. 
*gnu/packages/patches/openfoam-4.1-cleanup.patch: New file
*gnu/packages/simulation.scm: New file
*gnu/local.mk (GNU_SYSTEM_MODULES): Add module.
(dist_patch_DATA): Add patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-15 18:31:53 +02:00
Maxim Cournoyer 66e5570037
gnu: emacs-emms: Fix metadata retrieval for MP3 and FLAC files. 
* gnu/packages/emacs.scm (emacs-emms): Reference find, mpg321 and metaflac by
their complete file path.
[inputs]: Add flac.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-15 18:31:53 +02:00
Stefan Reichör 24d158136f
gnu: Add python-schedule. 
* gnu/packages/python.scm (python-schedule, python2-schedule): New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-15 18:31:53 +02:00
Stefan Reichör 893f9d240a
gnu: Add pydf. 
* gnu/packages/disk.scm (pydf): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-15 18:31:53 +02:00
Efraim Flashner 56bf42fb40
gnu: libzip: Fix building on 32-bit architectures. 
* gnu/packages/compression.scm (libzip)[arguments]: New field, add phase
to skip tests which are known to have issues on 32-bit architectures.
 2017-09-15 15:19:42 +03:00
Mark H Weaver daca2ec4bb
gnu: linux-libre: Update to 4.13.2. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.2.
(%linux-libre-hash): Update hash.
(linux-libre, linux-libre-arm-generic): Remove patch.
 2017-09-15 00:31:15 -04:00
Mark H Weaver c2ab0f8950
gnu: linux-libre@4.9: Update to 4.9.50. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.50.  Remove patch.
 2017-09-15 00:30:21 -04:00
Mark H Weaver d22a843f57
gnu: linux-libre@4.4: Update to 4.4.88. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.88.  Remove patch.
 2017-09-15 00:29:23 -04:00
Efraim Flashner 2206bd340b
gnu: Add gnucobol. 
* gnu/packages/cobol.scm (gnucobol): New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2017-09-15 06:36:21 +03:00
Efraim Flashner 14728ab78f
gnu: Update default gcc-objc and gcc-objc++. 
* gnu/packages/gcc.scm (gcc-objc, gcc-objc++): Update default to 5.
 2017-09-15 06:36:19 +03:00
Efraim Flashner e05f8d2fb3
gnu: Add gcc-objc++@7. 
* gnu/packages/gcc.scm (gcc-objc++@7): New variable.
 2017-09-15 06:36:17 +03:00
Efraim Flashner ce9afe2b3b
gnu: Add gcc-objc@7. 
* gnu/packages/gcc.scm (gcc-objc@7): New variable.
 2017-09-15 06:36:15 +03:00
Efraim Flashner 7a7c630856
gnu: Add gcc-objc++@6. 
* gnu/packages/gcc.scm (gcc-objc++@6): New variable.
 2017-09-15 06:36:12 +03:00
Efraim Flashner 4072c10bee
gnu: Add gcc-objc@6. 
* gnu/packages/gcc.scm (gcc-objc@6): New variable.
 2017-09-15 06:36:07 +03:00
Efraim Flashner ed8cdab870
gnu: Add gcc-objc++@5. 
* gnu/packages/gcc.scm (gcc-objc++@5): New variable.
 2017-09-15 06:36:04 +03:00
Efraim Flashner f51d01e1c3
gnu: Add gcc-objc@5. 
* gnu/packages/gcc.scm (gcc-obj@5): New variable.
 2017-09-15 06:36:01 +03:00
Kei Kebreau db7f7eb8ca
gnu: graphicsmagick: Fix CVE-2017-{11403,14103}. 
* gnu/packages/imagemagick.scm (graphicsmagick)[source]: Add patch.
* gnu/packages/patches/graphicsmagick-CVE-2017-11403+CVE-2017-14103.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-09-14 09:23:19 -04:00
ng0 c61794cf45
gnu: Add cpputest. 
* gnu/packages/check.scm (cpputest): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-14 14:07:25 +02:00
Stefan Reichör 205441eb0e
gnu: Add stgit. 
* gnu/packages/version-control.scm (stgit): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-14 14:07:25 +02:00
R H 6fcf8c2d70
gnu: mpv: Update to 0.27.0. 
* gnu/packages/video.scm (mpv): Update to 0.27.0.
 2017-09-14 14:07:25 +02:00
Peter Mikkelsen 194b4e7d65
gnu: Add godot. 
* gnu/packages/game-development.scm (godot): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-14 14:07:25 +02:00
Efraim Flashner 4b052c6a4d
gnu: sudo: Update to 1.8.21p2. 
* gnu/packages/admin.scm (sudo): Update to 1.8.21p2.
 2017-09-14 09:50:04 +03:00
Eric Bavier eb28a777b5
gnu: Add John the Ripper. 
* gnu/packages/password-utils.scm (john-the-ripper-jumbo): New variable.
 2017-09-13 22:07:21 -05:00
Arun Isaac aa90375afe
gnu: Add os-prober. 
* gnu/packages/bootloaders.scm (os-prober): New variable.
 2017-09-14 04:35:15 +05:30
Christopher Baines 909dcf5b46
gnu: Add ikiwiki. 
* gnu/packages/web.scm (ikiwiki): New variable.
 2017-09-13 18:19:31 +01:00
Christopher Baines f0539b66fe
gnu: Add perl-cgi-session. 
* gnu/packages/web.scm (perl-cgi-session): New variable.
 2017-09-13 18:19:31 +01:00
Christopher Baines 86bd64b613
gnu: Add perl-yaml-libyaml. 
* gnu/packages/perl.scm (perl-yaml-libyaml): New variable.
 2017-09-13 18:19:31 +01:00
Christopher Baines 4f0ee1b4df
gnu: Add perl-html-scrubber. 
* gnu/packages/web.scm (perl-html-scrubber): New variable.
 2017-09-13 18:19:30 +01:00
Christopher Baines 7d1f9c91e6
gnu: Add perl-test-eol. 
* gnu/packages/perl.scm (perl-test-eol): New variable.
 2017-09-13 18:19:30 +01:00
Christopher Baines 88002553ae
gnu: Add perl-test-notabs. 
* gnu/packages/perl.scm (perl-test-notabs): New variable.
 2017-09-13 18:19:30 +01:00
Christopher Baines 3d74955842
gnu: Add perl-test-memory-cycle. 
* gnu/packages/perl.scm (perl-test-memory-cycle): New variable.
 2017-09-13 18:19:30 +01:00
Christopher Baines b4387d868b
gnu: Add perl-devel-cycle. 
* gnu/packages/perl.scm (perl-devel-cycle): New variable.
 2017-09-13 18:19:30 +01:00
Christopher Baines d5b50202d7
gnu: Add perl-test-cpan-meta. 
* gnu/packages/perl.scm (perl-test-cpan-meta): New variable.
 2017-09-13 18:19:29 +01:00
Christopher Baines 19d81cf7dc
gnu: Add perl-test-cpan-meta-json. 
* gnu/packages/perl.scm (perl-test-cpan-meta-json): New variable.
 2017-09-13 18:19:29 +01:00
Christopher Baines 9d46919f9c
gnu: Add perl-text-markdown-discount. 
* gnu/packages/markdown.scm (perl-text-markdown-discount): New variable.
* gnu/packages/patches/perl-text-markdown-discount-use-system-markdown.patch:
  New file.
 2017-09-13 18:19:29 +01:00
Christopher Baines 31d3a7c729
gnu: Add discount. 
This is required by perl-text-markdown-discount, which is required by ikiwiki.

* gnu/packages/markdown.scm (discount) New variable.
 2017-09-13 18:19:29 +01:00
Mark H Weaver 921bb359ba
gnu: linux-libre@4.9: Fix hash. 
The linux-libre-4.9.49 tarball on the distribution site was repacked using a
non-deterministic process, thus changing the tarball hash, although the
contents of the files in the tarball were not changed.

* gnu/packages/linux.scm (linux-libre-4.9): Update hash.
 2017-09-13 12:55:14 -04:00
Mark H Weaver be2b2dff21
gnu: linux-libre: Fix CVE-2017-1000251. 
* gnu/packages/linux.scm (linux-libre, linux-libre-4.9)
(linux-libre-4.4, linux-libre-arm-generic): Add patch.
 2017-09-13 12:52:50 -04:00
Efraim Flashner ad057b79dd
gnu: xorriso: Update to 1.4.8. 
* gnu/packages/cdrom.scm (xorriso): Update to 1.4.8.
 2017-09-13 18:46:44 +03:00
Mark H Weaver 27236a4348
gnu: bluez: Add replacement to fix CVE-2017-1000250. 
* gnu/packages/patches/bluez-CVE-2017-1000250.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (bluez)[replacement]: New field.
(bluez/fixed): New variable.
 2017-09-13 10:43:03 -04:00
Efraim Flashner 35daddede1
gnu: gcc@7: Update description. 
* gnu/packages/gcc.scm (gcc@7)[description]: Remove Java from the list
of supported languages.
 2017-09-13 08:55:49 +03:00
Efraim Flashner ab53bdf01c
gnu: isl: Update to 0.18. 
* gnu/packages/gcc.scm (isl): Update to 0.18.
(isl-0.11): New variable.
(gcc@4.8, cloog)[inputs]: Use isl-0.11.
 2017-09-13 08:55:47 +03:00
Efraim Flashner 2b8d4ce819
gnu: gcc: Clean up inputs. 
* gnu/packages/gcc.scm (gcc@4.7)[inputs]: Remove isl, cloog.
(gcc@4.8)[inputs]: Add isl, cloog.
(gcc@6)[inputs]: Remove cloog.
 2017-09-13 08:55:45 +03:00
Efraim Flashner dd4efefdb0
gnu: gcc@4.9: Inherit from gcc@4.8. 
* gnu/packages/gcc.scm (gcc@4.9)[inherit]: Inherit from gcc@4.8.
[supported-systems]: Remove field.
 2017-09-13 08:55:42 +03:00
Tobias Geerinckx-Rice 3f9a4eaf92
gnu: awscli: Update to 1.11.151. 
* gnu/packages/python.scm (awscli): Update to 1.11.151.
 2017-09-13 04:30:32 +02:00
Tobias Geerinckx-Rice 46841c07ec
gnu: python-s3transfer: Update to 0.1.11. 
* gnu/packages/python.scm (python-s3transfer): Update to 0.1.11.
 2017-09-13 04:30:32 +02:00
Tobias Geerinckx-Rice 01fc102e37
gnu: python-botocore: Update to 1.7.9. 
* gnu/packages/python.scm (python-botocore): Update to 1.7.9.
 2017-09-13 04:30:31 +02:00
Christopher Baines c9ce8e1766
gnu: Update signing-party. 
Also add more inputs to make the caff program run. I haven't successfully used
it yet though.

* gnu/packages/gnupg.scm (signing-party)[version]: Update to 2.6.
  [source]: Update origin sha256.
  [native-inputs]: Add autoconf and automake.
  [inputs]: Add perl-text-template, perl-mime-tools, perl-gnupg-interface and
  perl-net-idn-encode as these are required by caff. Also add libmd as this is
  required by TODO.
  [arguments]: Add the change-directory and wrap-programs phase, and fix a
  regex and Makefile path in the configure phase.
 2017-09-12 22:59:38 +01:00
Christopher Baines 329779159b
gnu: Add libmd. 
* gnu/packages/crypto.scm (libmd): New variable.
 2017-09-12 22:59:38 +01:00
Christopher Baines 34ef575590
gnu: Add perl-gnupg-interface. 
* gnu/packages/gnupg.scm (perl-gnupg-interface): New variable.
 2017-09-12 22:59:37 +01:00
Christopher Baines 996364fb4e
gnu: Add perl-text-template. 
* gnu/packages/perl.scm (perl-text-template): New variable.
 2017-09-12 22:59:37 +01:00
Christopher Baines 24c1c51334
gnu: Add perl-net-idn-encode. 
* gnu/packages/perl.scm (perl-net-idn-encode): New variable.
 2017-09-12 22:59:37 +01:00
Christopher Baines a6fe930452
gnu: Add perl-mime-tools. 
* gnu/packages/perl.scm (perl-mime-tools): New variable.
 2017-09-12 22:59:37 +01:00
Christopher Baines d6daca0ee5
gnu: Add perl-mailtools. 
* gnu/packages/perl.scm (perl-mailtools): New variable.
 2017-09-12 22:59:37 +01:00
Christopher Baines 2d6125ed4d
gnu: Add perl-convert-binhex. 
* gnu/packages/perl.scm (perl-convert-binhex): New variable.
 2017-09-12 22:59:36 +01:00
Christopher Baines b7206dd362
gnu: Add perl-moox-late. 
* gnu/packages/perl.scm (perl-moox-late): New variable.
 2017-09-12 22:59:36 +01:00
Christopher Baines 40db2394b2
gnu: Add perl-moox-handlesvia. 
* gnu/packages/perl.scm (perl-moox-handlesvia): New variable.
 2017-09-12 22:59:36 +01:00
Christopher Baines 3565756f44
gnu: Add perl-data-perl. 
* gnu/packages/perl.scm (perl-data-perl): New variable.
 2017-09-12 22:59:36 +01:00
Christopher Baines 3a58f45502
gnu: Add perl-moox. 
* gnu/packages/perl.scm (perl-moox): New variable.
 2017-09-12 22:59:36 +01:00
Ludovic Courtès 1fda01ef42
gnu: texinfo: Add 6.5. 
* gnu/packages/texinfo.scm (texinfo-latest): New variable.
 2017-09-12 23:56:34 +02:00
Tobias Geerinckx-Rice bbb1246fd8
gnu: youtube-dl: Update to 2017.09.11. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.09.11.
 2017-09-12 23:36:24 +02:00
Tobias Geerinckx-Rice 097b80e180
gnu: gtksourceview: Update to 3.24.4. 
* gnu/packages/gtk.scm (gtksourceview): Update to 3.24.4.
 2017-09-12 23:36:24 +02:00
Tobias Geerinckx-Rice db122a9b5e
gnu: libpeas: Update to 1.22.0. 
* gnu/packages/gnome.scm (libpeas): Update to 1.22.0.
[inputs]: Remvoe libxml2.
 2017-09-12 23:36:23 +02:00
Tobias Geerinckx-Rice 0f8c520408
gnu: network-manager: Update to 1.8.2. 
* gnu/packages/gnome.scm (network-manager): Update to 1.8.2.
 2017-09-12 23:36:23 +02:00
Tobias Geerinckx-Rice 8fc5cdc6a0
gnu: tracker: Update to 1.12.3. 
* gnu/packages/gnome.scm (tracker): Update to 1.12.3.
 2017-09-12 23:36:23 +02:00
Tobias Geerinckx-Rice 9c2d0a1aa8
gnu: gnome-shell-extensions: Update to 3.24.3. 
* gnu/packages/gnome.scm (gnome-shell-extensions): Update to 3.24.3.
 2017-09-12 23:36:22 +02:00
Tobias Geerinckx-Rice bd38e6a560
gnu: gnome-settings-daemon: Update to 3.24.3. 
* gnu/packages/gnome.scm (gnome-settings-daemon): Update to 3.24.3.
 2017-09-12 23:36:22 +02:00
Tobias Geerinckx-Rice f97e96ae8b
gnu: gsettings-desktop-schemas: Update to 3.24.1. 
* gnu/packages/gnome.scm (gsettings-desktop-schemas): Update to 3.24.1.
 2017-09-12 23:36:22 +02:00
Ludovic Courtès f40aef6b3b
gnu: cups-filters: Remove reference to "acroread". 
* gnu/packages/cups.scm (cups-filters)[arguments]: Pass
"--with-acroread-path".
 2017-09-12 23:17:50 +02:00
Ludovic Courtès b263967018
gnu: cups-filters: Pass "--localstatedir". 
* gnu/packages/cups.scm (cups-filters)[arguments]: Pass --localstatedir.
 2017-09-12 23:15:54 +02:00
Ludovic Courtès 1728c41171
gnu: cups-filters: Make sure filters find Ghostscript. 
* gnu/packages/cups.scm (cups-filters)[arguments]: Add
'patch-foomatic-hardcoded-file-names' and 'wrap-filters' phases.
 2017-09-12 23:07:41 +02:00
Marius Bakke 790ba6d3e1
gnu: imagemagick: Update to 6.9.9-12. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-12.
 2017-09-12 22:55:05 +02:00
Marius Bakke 8d3975459d
gnu: libraw: Update to 0.18.4. 
* gnu/packages/photo.scm (libraw): Update to 0.18.4.
 2017-09-12 22:55:05 +02:00
Marius Bakke 40c2653375
gnu: ffmpeg: Update to 3.3.4. 
* gnu/packages/video.scm (ffmpeg): Update to 3.3.4.
 2017-09-12 22:55:05 +02:00
Marius Bakke 51fcc6d2ae
gnu: feh: Update to 2.20. 
* gnu/packages/image-viewers.scm (feh): Update to 2.20.
 2017-09-12 22:55:05 +02:00
Marius Bakke 493f2cbf06
gnu: notmuch: Update to 0.25.1. 
* gnu/packages/mail.scm (notmuch): Update to 0.25.1.
 2017-09-12 22:55:05 +02:00
Marius Bakke 777f485ee6
gnu: python-django: Update to 1.10.8 [fixes CVE-2017-12794]. 
* gnu/packages/django.scm (python-django): Update to 1.10.8.
 2017-09-12 22:55:05 +02:00
ng0 8b8702c939
gnu: neomutt: Update to 20170912. 
* gnu/packages/mail.scm (neomutt): Update to 20170912.
 2017-09-12 21:17:55 +02:00
Dave Love b08952f1bb
gnu: openmpi: Configure without builtin atomics. 
See https://www.mail-archive.com/users@lists.open-mpi.org//msg31400.html

* gnu/packages/mpi.scm (openmpi)[arguments]: Don't configure with
--enable-builtin-atomics.

Signed-off-by: Ludovic Courtès <ludovic.courtes@inria.fr>
 2017-09-12 14:56:59 +02:00
Dave Love a247fe7b0d
gnu: openmpi: Remove Valgrind from closure. 
* gnu/packages/mpi.scm (openmpi)[arguments]: Elide romio config info to
avoid reference to valgrind.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-12 08:58:27 +02:00
ng0 b5831eb771
gnu: Add mate. 
* gnu/packages/mate.scm (mate): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-12 09:55:42 +03:00
ng0 16cd07c163
gnu: Add mate-control-center. 
* gnu/packages/mate.scm (mate-control-center): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-12 09:55:40 +03:00
ng0 4d553e0a93
gnu: Add mate-media. 
* gnu/packages/mate.scm (mate-media): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-12 09:55:37 +03:00
ng0 da78e01b87
gnu: Add mate-applets. 
* gnu/packages/mate.scm (mate-applets): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-12 09:55:34 +03:00
ng0 0bb3d6bf3a
gnu: Add mate-settings-daemon. 
* gnu/packages/mate.scm (mate-settings-daemon): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-12 09:55:31 +03:00
ng0 9c9909effb
gnu: Add libmatekbd. 
* gnu/packages/mate.scm (libmatekbd): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-12 09:55:28 +03:00
ng0 133cb8766c
gnu: Add libmatemixer. 
* gnu/packages/mate.scm (libmatemixer): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-12 09:55:25 +03:00
ng0 c3812bec8e
gnu: Add mate-panel. 
* gnu/packages/mate.scm (mate-panel): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-12 09:55:23 +03:00
ng0 a8376ca5bf
gnu: Add mate-session-manager. 
* gnu/packages/mate.scm (mate-session-manager): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-12 09:55:21 +03:00
ng0 4d26a340b5
gnu: Add marco. 
* gnu/packages/mate.scm (marco): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-12 09:55:20 +03:00
ng0 17df429ce6
gnu: Add mate-terminal. 
* gnu/packages/mate.scm (mate-terminal): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-12 09:55:18 +03:00
ng0 42a6eaaceb
gnu: Add caja. 
* gnu/packages/mate.scm (caja): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-12 09:55:10 +03:00
Efraim Flashner fa7647c631
gnu: monero: Fix building on aarch64-linux. 
* gnu/packages/finance.scm (monero)[arguments]: Add a configure-flag to
set architecture type on aarch64.
 2017-09-12 09:55:07 +03:00
Jan Nieuwenhuizen f435379762
gnu: mes: Update to 0.10. 
* gnu/packages/mes.scm (mes): Update to 0.10.
 2017-09-11 18:03:42 -04:00
Leo Famulari 007b92cfc0
gnu: mpg123: Update to 1.25.6 [fixes CVE-2017-12797]. 
* gnu/packages/mp3.scm (mpg123): Update to 1.25.6.
 2017-09-11 13:23:26 -04:00
Tobias Geerinckx-Rice 5564b2c53e
gnu: libchamplain: Update to 0.12.16. 
* gnu/packages/gnome.scm (libchamplain): Update to 0.12.16.
 2017-09-11 15:01:20 +02:00
Tobias Geerinckx-Rice 45586b8dd8
gnu: gnome-online-accounts: Update to 3.24.3. 
* gnu/packages/gnome.scm (gnome-online-accounts): Update to 3.24.3.
 2017-09-11 15:01:20 +02:00
Ludovic Courtès 66ae958c5b
gnu: emacs: Patch message-mode enriched text translation [security fix]. 
* gnu/packages/patches/emacs-unsafe-enriched-mode-translations.patch:
New file.
* gnu/packages/emacs.scm (emacs)[source](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-09-11 14:52:29 +02:00
Jan Nieuwenhuizen 238ee64802
gnu: nyacc: Update to 0.82.0. 
* gnu/packages/mes.scm (nyacc): Update to 0.82.0.
 2017-09-11 14:44:05 +02:00
Ben Woodcroft d8661f52b1
gnu: ruby-activesupport: Update to 5.1.4. 
* gnu/packages/ruby.scm (ruby-activesupport): Update to 5.1.4.
 2017-09-11 21:43:20 +10:00
宋文武 6bda496286
gnu: icedtea-8: Install the nss.cfg file to JRE. 
Before this, accessing HTTPS will throw an exception about 'nss.cfg' could not
be found.

* gnu/packages/java.scm (icedtea-8)[arguments]: Copy 'nss.cfg' from JDK into
JRE in the install phase.
 2017-09-11 19:07:56 +08:00
Ludovic Courtès 130c3bc894
gnu: gdb: Update to 8.0.1. 
* gnu/packages/gdb.scm (gdb): Update to 8.0.1.
 2017-09-11 11:57:51 +02:00
Ludovic Courtès 21c2757f27
gnu: guix: Update snapshot. 
* gnu/packages/package-management.scm (guix): Update to a9468b4.
 2017-09-11 11:36:38 +02:00
Theodoros Foradis 79228a52d2
gnu: Add monero-core. 
* gnu/packages/finance.scm (monero-core): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-11 11:10:21 +02:00
Theodoros Foradis 8514662b20
gnu: Add monero. 
* gnu/packages/finance.scm (monero): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-11 11:10:20 +02:00
Efraim Flashner e5f3d1183c
gnu: libffcall: Update to 2.0. 
* gnu/packages/libffcall.scm (libffcall): Update to 2.0.
 2017-09-11 11:16:11 +03:00
Mark H Weaver 4b4869ce97
gnu: linux-libre: Update to 4.13.1. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.1.
(%linux-libre-hash): Update hash.
 2017-09-11 00:42:09 -04:00
Mark H Weaver 3abc12d6d2
gnu: linux-libre@4.9: Update to 4.9.49. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.49.
 2017-09-11 00:41:24 -04:00
Jelle Licht cfd34f4316
gnu: python-apsw: Build with all extensions. 
* gnu/packages/python.scm (python-apsw)[phases]: Replace build phase; add flag
  to build all extensions. Add build-test-helper to allow testing of
  extensions.
 2017-09-11 01:12:59 +02:00
Tobias Geerinckx-Rice c1b815a5b8
gnu: gnome-sudoku: Update to 3.26.0. 
* gnu/packages/gnome.scm (gnome-sudoku): Update to 3.26.0.
 2017-09-11 00:54:03 +02:00
Tobias Geerinckx-Rice 55a9f04052
gnu: gnome-klotski: Update to 3.22.2. 
* gnu/packages/gnome.scm (gnome-klotski): Update to 3.22.2.
 2017-09-11 00:54:02 +02:00
Tobias Geerinckx-Rice da40501ba5
gnu: libgnome-games-support: Update to 1.2.3. 
* gnu/packages/gnome.scm (libgnome-games-support): Update to 1.2.3.
 2017-09-11 00:54:01 +02:00
Tobias Geerinckx-Rice e0f4966448
gnu: cloc: Fix typo in description. 
* gnu/packages/code.scm (cloc)[description]: Fix typo.
 2017-09-11 00:54:01 +02:00
Tobias Geerinckx-Rice 7ca001c33d
gnu: cloc: Update to 1.74. 
* gnu/packages/code.scm (cloc): Update to 1.74.
[source]: Update source URL.
 2017-09-11 00:54:00 +02:00
Tobias Geerinckx-Rice 4e4de30a4b
gnu: youtube-dl: Update to 2017.09.10. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.09.10.
 2017-09-11 00:54:00 +02:00
Kei Kebreau 4561498e1f
gnu: Fix build failures caused by commit 
d10092b849.

* gnu/packages/bioinformatics.scm (seek)[arguments]: Restore previous phase
order.
* gnu/packages/ci.scm (cuirass)[arguments]: Add patch-/bin/sh phase.
 2017-09-10 18:21:35 -04:00
Jan Nieuwenhuizen 4aafce22ab
gnu: Add emacs-bash-completion. 
* gnu/packages/emacs.scm (emacs-bash-completion): New variable.
 2017-09-10 22:43:05 +02:00
Efraim Flashner 338b58e0ea
gnu: openjpeg: Fix CVE-2017-14164. 
* gnu/packages/image.scm (openjpeg)[source]: Add patch.
* gnu/packages/patches/openjpeg-CVE-2017-14164.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-09-10 22:00:35 +03:00
Efraim Flashner 224bb4b6f9
gnu: graphicsmagick: Fix CVE-2017-14165. 
* gnu/packages/imagemagick.scm (graphicsmagick)[source]: Add patch.
* gnu/packages/patches/graphicsmagick-CVE-2017-14165.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-09-10 21:45:45 +03:00
Christopher Baines 814da59fcc
gnu: Add emacs-wgrep. 
* gnu/packages/emacs.scm (emacs-wgrep): New variable.
 2017-09-10 19:27:00 +01:00
Christopher Baines 81808194ac
gnu: Add emacs-rspec. 
* gnu/packages/emacs.scm (emacs-rspec): New variable.
 2017-09-10 19:26:51 +01:00
Kei Kebreau 2cc752c0b0
gnu: graphicsmagick: Fix CVE-2017-14042. 
* gnu/packages/imagemagick.scm (graphicsmagick)[source]: Add patch.
* gnu/packages/patches/graphicsmagick-CVE-2017-14042.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2017-09-10 09:33:56 -04:00
Tobias Geerinckx-Rice bc64676c46
gnu: btrfs-progs: Update to 4.13. 
* gnu/packages/linux.scm (btrfs-progs): Update 4.13.
[native-inputs]: Add acl.
 2017-09-10 12:50:32 +02:00
Ludovic Courtès 67a37c6311
gnu: foomatic-filters: Add missing patches. 
This is a followup to commit d02aabaf1b.

* gnu/packages/patches/foomatic-filters-CVE-2015-8327.patch: New file.
* gnu/packages/patches/foomatic-filters-CVE-2015-8560.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
 2017-09-10 12:00:25 +02:00
Ludovic Courtès 5db0a1cd5a
gnu: Add foo2zjs. 
* gnu/packages/cups.scm (foo2zjs): New variable.
 2017-09-09 23:01:52 +02:00
Ludovic Courtès d02aabaf1b
gnu: Add foomatic-filters. 
* gnu/packages/cups.scm (foomatic-filters): New procedure.
 2017-09-09 23:01:52 +02:00
Leo Famulari 45bed1d3ea
gnu: python2-acme: Remove package. 
This package has not built successfully for a long time. Since it
appears to have no users, we remove it for now.

* gnu/packages/tls.scm (python2-acme): Remove variable.
 2017-09-08 19:55:34 -04:00
Leo Famulari 73a2ef3697
gnu: tcpdump: Remove alternate source URL. 
* gnu/packages/admin.scm (tcpdump)[source]: Remove alternate URL.
 2017-09-08 19:36:04 -04:00
Leo Famulari 72fe8956f5
gnu: certbot, python-acme: Update to 0.18.1. 
* gnu/packages/tls.scm (certbot, python-acme, python2-acme): Update to 0.18.1.
 2017-09-08 19:26:55 -04:00
Oleg Pykhalov 1eb6b72483
gnu: Add python-betamax-matchers. 
* gnu/packages/python.scm (python-betamax-matchers, python2-betamax-matchers):
  New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-08 18:12:51 +02:00
Oleg Pykhalov 4967946b8a
gnu: Add python-uritemplate. 
* gnu/packages/python.scm (python-uritemplate, python2-uritemplate): New
  variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-08 18:08:58 +02:00
Troy Sankey a5d6b0a3d2
gnu: notmuch-addrlookup-c: Update to 8-1.88f156d. 
* gnu/packages/mail.scm (notmuch-addrlookup-c): Update to 8-1.88f156d.
[source]: Use git-fetch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-08 18:08:31 +02:00
ng0 a79830d035
gnu: neomutt: Update to 20170907. 
* gnu/packages/mail.scm (neomutt): Update to 20170907.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-08 17:43:37 +02:00
Ludovic Courtès 8bfa40eae5
gnu: hwloc: Update to 1.11.8. 
* gnu/packages/mpi.scm (hwloc): Update to 1.11.8.
 2017-09-08 12:48:08 +02:00
Mark H Weaver b3a63e697d
gnu: linux-libre@4.9: Update to 4.9.48. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.48.
 2017-09-08 03:46:16 -04:00
Mark H Weaver 5c6f434d74
gnu: linux-libre@4.4: Update to 4.4.87. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.87.
 2017-09-08 03:45:30 -04:00
Ludovic Courtès cd1ad27e6c
gnu: elogind: Use itself as the cgroup controller. 
Fixes a regression introduced in
fa67d56541 whereby elogind would fail to
start with:

  Cannot determine cgroup we are running in: No data available
  Out of memory.

thereby preventing log-in altogether.

* gnu/packages/freedesktop.scm (elogind)[arguments]: Pass
"--with-cgroup-controller=elogind".
* gnu/tests/desktop.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2017-09-08 00:11:21 +02:00
Ludovic Courtès 505760ed08
gnu: elogind: Remove unnecessary configure flag. 
* gnu/packages/freedesktop.scm (elogind)[arguments]: Remove
"--with-libcap" configure flag, which is no longer needed.
 2017-09-08 00:11:21 +02:00
Leo Famulari 81635ad03e
gnu: tcpdump: Update to 4.9.2 [security fixes]. 
Fixes CVE-2017-{12893,12894,12895,12896,12897,12898,12899,12900,12901,12902,
12985,12986,12987,12988,12989,12990,12991,12992,12993,12994,12995,12996,12997,
12998,12999,13000,13001,13002,13003,13004,13005,13006,13007,13008,13009,13010,
13012,13013,13014,13015,13016,13017,13018,13019,13020,13021,13022,13023,13024,
13025,13026,13027,13028,13029,13030,13031,13032,13033,13034,13035,13036,13037,
13038,13039,13040,13041,13042,13043,13044,13045,13046,13047,13048,13049,13050,
13051,13052,13053,13054,13055,13687,13688,13689,13690,13725}.

* gnu/packages/admin.scm (tcpdump): Update to 4.9.2.
[source]: Remove patches and add alternate source URL.
* gnu/packages/patches/tcpdump-CVE-2017-11541.patch,
gnu/packages/patches/tcpdump-CVE-2017-11542.patch,
gnu/packages/patches/tcpdump-CVE-2017-11543.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2017-09-07 17:44:20 -04:00
Leo Famulari 3b2802f8c4
gnu: certbot, python-acme: Update to 0.18.0. 
* gnu/packages/tls.scm (certbot, python-acme, python2-acme): Update to 0.18.0.
 2017-09-07 15:47:01 -04:00
Leo Famulari 6a7bd25bf2
gnu: qemu: Fix CVE-2017-{13711,14167}. 
* gnu/packages/patches/qemu-CVE-2017-14167.patch
gnu/packages/patches/qemu-CVE-2017-13711.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/virtualization.scm (qemu)[source]: Use them.
 2017-09-07 15:46:57 -04:00
Leo Famulari 94d671f673
gnu: libarchive: Replace with libarchive 3.3.2 and fix CVE-2017-14166. 
* gnu/packages/backup.scm (libarchive)[replacement]: New field.
(libarchive-3.3.2): New variable.
* gnu/packages/patches/libarchive-CVE-2017-14166.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-09-07 14:29:38 -04:00
Oleg Pykhalov ba74ef94d7
gnu: pulseaudio: Update to 11.0. 
From af245f3289d14a6f6cc6e5454e64a47241517cf1 Mon Sep 17 00:00:00 2001
From: Oleg Pykhalov <go.wigust@gmail.com>
Date: Thu, 7 Sep 2017 08:23:43 +0300
Subject: [PATCH] gnu: pulseaudio: Update to 11.0.

* gnu/packages/pulseaudio.scm (pulseaudio): Update to 11.0.
 2017-09-07 18:18:55 +02:00
Ludovic Courtès 5a7deb1174
gnu: Add BLIS. 
* gnu/packages/maths.scm (make-blis): New procedure.
(blis, ignorance): New variables.
(blis/x86_64): New macro.
(blis-sandybridge, blis-haswell, blis-knl): New variables.
 2017-09-07 15:38:56 +02:00
Ludovic Courtès c2ffcc4425
gnu: elogind: Add '-L' flag for libcap in libelogind.la. 
This fix allows us to revert this series of commits:

  1b97e9261 * gnu: gdm: Add missing input.
  de0c89f18 * gnu: colord: Add missing input.
  7e38ba654 * gnu: accountsservice: Add missing input.
  166bc1b25 * gnu: network-manager: Add missing input.
  daae20894 * gnu: modem-manager: Add missing input.
  1f919459e * gnu: udisks: Add missing input.
  744e9d074 * gnu: mutter: Add missing input.
  0cce140dc * gnu: gnome-session: Add missing input.
  77c2476ae * gnu: polkit: Add missing input.
  124ac301c * gnu: weston: Add missing input.
  472c2223c * gnu: kmscon: Add missing input.

* gnu/packages/freedesktop.scm (elogind)[arguments]: Add
'add-libcap-to-search-path' phase.
(weston)[inputs]: Remove LIBCAP.
(udisks): Likewise.
(accountsservice): Likewise.
(modem-manager): Likewise.
* gnu/packages/gnome.scm (colord): Likewise
(gnome-session): Likewise.
(mutter): Likewise.
(network-manager): Likewise.
(gdm): Likewise.
* gnu/packages/polkit.scm (polkit): Likewise.
* gnu/packages/terminals.scm (kmscon): Likewise.
 2017-09-07 13:57:42 +02:00
Peter Mikkelsen 26ba09ba35
gnu: elogind: Update to 232.4. 
* gnu/packages/freedesktop.scm (elogind): Update to 232.4.
[arguments]: Add --with-rootlibexecdir.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-07 13:57:39 +02:00
Roel Janssen eaff063aa0
gnu: emacs-ess: Relocate the etc directory so that ESS can find it. 
* gnu/packages/emacs.scm (emacs-ess): Relocate the etc directory so
  that ESS can find it.
 2017-09-07 09:59:32 +02:00
Cyril Roelandt c98f9c5296
gnu: python-tox: Update to 2.8.0. 
* gnu/packages/python.scm (python-tox): Update to 2.8.0.
 2017-09-06 23:54:22 +02:00
Efraim Flashner 18e565bf67
gnu: terminology: Update to 1.1.1. 
* gnu/packages/enlightenment.scm (terminology): Update to 1.1.1.
 2017-09-06 22:07:37 +03:00
Peter Mikkelsen 1b97e92613
gnu: gdm: Add missing input. 
* gnu/packages/gnome.scm (gdm)[inputs]: Add libcap.
 2017-09-06 19:05:56 +03:00
Peter Mikkelsen de0c89f181
gnu: colord: Add missing input. 
* gnu/packages/gnome.scm (colord)[inputs]: Add libcap.
 2017-09-06 19:05:56 +03:00
Peter Mikkelsen 7e38ba654a
gnu: accountsservice: Add missing input. 
* gnu/packages/freedesktop.scm (accountsservice)[inputs]: Add libcap.
 2017-09-06 19:05:55 +03:00
Peter Mikkelsen 166bc1b259
gnu: network-manager: Add missing input. 
* gnu/packages/gnome.scm (network-manager)[inputs]: Add libcap.
 2017-09-06 19:05:55 +03:00
Peter Mikkelsen daae208942
gnu: modem-manager: Add missing input. 
* gnu/packages/freedesktop.scm (modem-manager)[inputs]: Add libcap.
 2017-09-06 19:05:55 +03:00
Peter Mikkelsen 1f919459eb
gnu: udisks: Add missing input. 
* gnu/packages/freedesktop.scm (udisks)[inputs]: Add libcap.
 2017-09-06 19:05:55 +03:00
Tobias Geerinckx-Rice 4ef6cfefaa
gnu: python-pyxb: Update to 1.2.6. 
* gnu/packages/xml.scm (python-pyxb): Update to 1.2.6.
 2017-09-06 17:12:42 +02:00
Tobias Geerinckx-Rice 35a4fefc01
gnu: iproute: Edit description. 
* gnu/packages/linux.scm (iproute)[description]: Re-order, be concise, and
omit information that is obsolete, misleading, or irrelevant to Guix users.
 2017-09-06 17:12:41 +02:00
Tobias Geerinckx-Rice ddcac5595e
gnu: iproute: Update to 4.13.0. 
* gnu/packages/linux.scm (iproute): Update to 4.13.0.
 2017-09-06 17:12:40 +02:00
Nicolas Goaziou e9ba22d6e1
gnu: emacs-org: Update to 20170906. 
* gnu/packages/emacs.scm (emacs-org): Update to 20170906, a.k.a. Org 9.1.
 2017-09-06 14:45:08 +02:00
Efraim Flashner 98df3a88b5
gnu: libzip: Update to 1.3.0 (fixes CVE-2017-14107). 
* gnu/packages/compression.scm (libzip): Update to 1.3.0.
[source]: Remove patch.
[arguments]: Remove custom 'patch-perl phase.
* gnu/packages/patches/libzip-CVE-2017-12858.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-09-06 14:20:43 +03:00
Efraim Flashner 3b7c606965
gnu: openjpeg: Fix CVE-2017-14151, CVE-2017-14152. 
* gnu/packages/image.scm (openjpeg)[source]: Add patches.
* gnu/packages/patches/openjpeg-CVE-2017-14151.patch,
gnu/packages/patches/openjpeg-CVE-2017-14152.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2017-09-06 14:20:40 +03:00
Nicolas Goaziou f049e79dc3
gnu: csound: Update to 6.09.1. 
* gnu/packages/audio.scm (csound): Update to 6.09.1.  Change source URI.
* gnu/packages/patches/csound-header-ordering.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove reference to patch above.
 2017-09-06 12:51:59 +02:00
Roel Janssen 026ebc141f
gnu: Update calibre to 3.6.0. 
* gnu/local.mk: Remove calibre-drop-unrar.patch
* gnu/packages/ebook.scm (calibre): Update to 3.6.0.
  Add python-html5-parser input.
* gnu/packages/patches/calibre-drop-unrar.patch: Remove file.
 2017-09-06 12:42:57 +02:00
Roel Janssen 13be557d98
gnu: Add python-html5-parser, python2-html5-parser. 
* gnu/packages/python.scm (python-html5-parser): New variable.
  (python2-html5-parser: New variable.
 2017-09-06 12:42:40 +02:00
Roel Janssen 2054b52201
gnu: Update python-lxml to 3.8.0. 
* gnu/packages/python.scm (python-lxml): Update to 3.8.0.
 2017-09-06 12:41:41 +02:00
Christopher Baines 21a656f590
gnu: Add emacs-go-mode. 
* gnu/packages/emacs.scm (emacs-go-mode): New variable.
 2017-09-06 08:51:38 +01:00
Efraim Flashner 744e9d0745
gnu: mutter: Add missing input. 
* gnu/packages/gnome.scm (mutter)[inputs]: Add libcap.
 2017-09-06 10:49:59 +03:00
Efraim Flashner 50918af29b
gnu: mutter: Only propagate glib once. 
* gnu/packages/gnome.scm (mutter)[propagated-inputs]: Remove duplicate
glib.
 2017-09-06 10:49:55 +03:00
Efraim Flashner 0cce140dc2
gnu: gnome-session: Add missing input. 
* gnu/packages/gnome.scm (gnome-settings)[inputs]: Add libcap.
 2017-09-06 10:49:51 +03:00
Efraim Flashner 77c2476ae3
gnu: polkit: Add missing input. 
* gnu/packages/polkit.scm (polkit)[inputs]: Add libcap.
 2017-09-06 10:49:47 +03:00
Efraim Flashner 124ac301c1
gnu: weston: Add missing input. 
* gnu/packages/freedesktop.scm (weston)[inputs]: Add libcap.
 2017-09-06 10:49:44 +03:00
Efraim Flashner 472c2223c0
gnu: kmscon: Add missing input. 
* gnu/packages/terminals.scm (kmscon)[inputs]: Add libcap.
 2017-09-06 10:49:31 +03:00
Efraim Flashner f1597427f2
gnu: file: Fix CVE-2017-1000249. 
* gnu/packages/file.scm (file)[replacement]: New field.
(file/fixed): New variable.
* gnu/packages/commencement.scm (file-boot0): Use package/inherit.
* gnu/packages/patches/file-CVE-2017-1000249.patch.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-09-05 23:04:05 +03:00
Tobias Geerinckx-Rice 5cf0997a0b
gnu: ruby-coderay: Update to 1.1.2. 
* gnu/packages/ruby.scm (ruby-coderay): Update to 1.1.2.
 2017-09-05 20:57:14 +02:00
Tobias Geerinckx-Rice 26ac5c90c1
gnu: nginx: Enable HTTP/2.0 (ngx_http_v2_module). 
* gnu/packages/web.scm (nginx)[arguments]: Add ‘--with-http_v2_module’ flag.
 2017-09-05 20:57:14 +02:00
Leo Famulari 514c2f4806
gnu: tcpdump: Fix CVE-2017-[11541,11542,11543]. 
* gnu/packages/patches/tcpdump-CVE-2017-11541.patch,
gnu/packages/patches/tcpdump-CVE-2017-11542.patch
gnu/packages/patches/tcpdump-CVE-2017-11543.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/admin.scm (tcpdump)[source]: Use them.
 2017-09-05 14:53:50 -04:00
Efraim Flashner 4c2aaa6056
gnu: mesa: Use exactly llvm@3.9.1. 
* gnu/packages/gl.scm (mesa)[inputs]: Use llvm@3.9.1.
 2017-09-05 21:52:12 +03:00
Efraim Flashner 665c0958d8
gnu: mesa: Enable more drivers. 
* gnu/packages/gl.scm (mesa)[arguments]: Split armhf and aarch64 driver
options, add more armhf specific drivers. Add offscreen platform.
 2017-09-05 21:52:09 +03:00
Efraim Flashner 1f42989eb0
gnu: libdrm: Enable more drivers for arm and aarch64. 
* gnu/packages/xdisorg.scm (libdrm)[arguments]: Add configure flags to
enable experimental architecture-specific video drivers.
 2017-09-05 21:52:07 +03:00
Efraim Flashner 0cae36b5e5
gnu: libmediainfo: Adjust build phases. 
* gnu/packages/video.scm (libmediainfo)[arguments]: Change to the build
directory before running autogen.
 2017-09-05 21:51:03 +03:00
Ricardo Wurmus fa67d56541
gnu: elogind: Update to 232.3. 
* gnu/packages/freedesktop.scm (elogind): Update to 232.3.
[home-page]: Use new upstream home page.
[arguments]: Disable tests, add new required configure flags; add build phase
"autogen".
[native-inputs]: Add autoconf, automake, libtool, and python.
 2017-09-05 16:59:46 +02:00
Ricardo Wurmus 8036caa75a
gnu: r-tidyr: Update to 0.7.1. 
* gnu/packages/statistics.scm (r-tidyr): Update to 0.7.1.
 2017-09-05 16:59:46 +02:00
Ricardo Wurmus 31b7f0c0fc
gnu: r-gdtools: Update to 0.1.6. 
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.6.
 2017-09-05 16:59:45 +02:00
Roel Janssen 325c039c1d
gnu: Add r-sparql. 
* gnu/packages/bioinformatics.scm (r-sparql): New variable.
 2017-09-05 11:02:03 +02:00
Tobias Geerinckx-Rice c0ac72e18c
gnu: epiphany: Update to 3.24.4. 
* gnu/packages/gnome.scm (epiphany): Update to 3.24.4.
 2017-09-05 05:44:27 +02:00
Tobias Geerinckx-Rice b8fb94d5b8
gnu: libvirt: Make selected inputs native-inputs. 
* gnu/packages/virtualization.scm (libvirt)[inputs]: Move perl, polkit, and
python from here...
[native-inputs]: ...to here.
 2017-09-05 05:27:41 +02:00
Tobias Geerinckx-Rice 2f110b32a4
gnu: libvirt: Update to 3.7.0. 
* gnu/packages/virtualization.scm (libvirt): Update to 3.7.0.
[native-inputs]: Add libxslt for xsltproc.
 2017-09-05 05:27:40 +02:00
Tobias Geerinckx-Rice 864f2f0ef0
gnu: python-libvirt: Update to 3.7.0. 
* gnu/packages/virtualization.scm (python-libvirt): Update to 3.7.0.
 2017-09-05 05:27:40 +02:00
Tobias Geerinckx-Rice b3fee5c141
gnu: Use HTTPS for libvirt.org. 
* gnu/packages/virtualization.scm (libvirt, python-libvirt)[home-page]:
Use HTTPS.
 2017-09-05 05:27:39 +02:00
Mark H Weaver b8b0f536a4
gnu: libidn2: Replace with 2.0.4 [security fixes]. 
* gnu/packages/libidn.scm (libidn2)[replacement]: New field.
(libidn2-2.0.4): New variable.
 2017-09-04 20:39:20 -04:00
Ludovic Courtès a913d9d926
gnu: emacs-tiny: Fix typo. 
* gnu/packages/emacs.scm (emacs-tiny)[description]: Fix typo.
 2017-09-04 23:52:44 +02:00
Christopher Baines 26361de404
gnu: Add emacs-minitest. 
* gnu/packages/emacs.scm (emacs-minitest): New variable.
 2017-09-04 22:31:37 +01:00
Marius Bakke a76585e553
Merge branch 'master' into staging 2017-09-04 22:34:28 +02:00
Marius Bakke 1dc32c2961
gnu: gtk+: Update to 3.22.20. 
* gnu/packages/gtk.scm (gtk+): Update to 3.22.20.
 2017-09-04 22:15:49 +02:00
Marius Bakke 3b6f837393
gnu: pango: Update to 1.40.12. 
* gnu/packages/gtk.scm (pango): Update to 1.40.12.
 2017-09-04 22:15:28 +02:00
Marius Bakke c427fda233
gnu: classpath-devel: Fix build after d10092b849. 
* gnu/packages/java.scm (classpath-devel)[arguments]: Actually run 'bootstrap'
phase.
 2017-09-04 22:08:55 +02:00
Alex Kost 8505d34829
gnu: emacs-browse-at-remote: Simplify 'check' phase. 
* gnu/packages/emacs.scm (emacs-browse-at-remote)[native-inputs]: Add
'ert-runner'.
[arguments]: Run it in the 'check' phase.
 2017-09-04 22:44:59 +03:00
Efraim Flashner 77bb6c227b
gnu: gpm: Fix build. 
* gnu/packages/linux.scm (gpm)[arguments]: Patch autogen.sh shebang
during the 'boottstrap phase.
 2017-09-04 22:36:01 +03:00
Efraim Flashner b82c63d013
gnu: quassel: Update package definition. 
* gnu/packages/irc.scm (quassel)[source]: Remove bundled scripts.
[arguments]: Update comments in 'configure-flags.
[inputs]: Remove oxygen-icons. Move extra-cmake-modules and qttools ...
[native-inputs]: ... to here.
 2017-09-04 22:21:33 +03:00
Leo Famulari 4b1dd9ab31
gnu: i3-wm: Update to 4.14. 
* gnu/packages/wm.scm (i3-wm): Update to 4.14.
 2017-09-04 11:19:27 -04:00
Leo Famulari 6cdb0f4d12
gnu: mpd: Update to 0.20.10. 
* gnu/packages/mpd.scm (mpd): Update to 0.20.10.
 2017-09-04 11:19:23 -04:00
Oleg Pykhalov 65101a2596
gnu: Add python-ghp-import. 
* gnu/packages/version-control.scm (python-ghp-import, python2-ghp-import):
New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-04 15:24:04 +02:00
Oleg Pykhalov 6325309898
gnu: Add emacs-tiny. 
* gnu/packages/emacs.scm (emacs-tiny): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-04 15:24:04 +02:00
Paul Garlick c4d4a77923
gnu: pt-scotch32: use keyword arguments from "scotch32" 
*gnu/packages/maths.scm (pt-scotch32) [arguments]: substitute keyword
arguments from "scotch32" package, ensuring that the INTSIZE32 macro is
set

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-04 15:24:04 +02:00
Mark H Weaver 6bd1c41e87
gnu: linux-libre: Update to 4.13. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.13.
(%linux-libre-hash): Update hash.
* gnu/packages/aux-files/linux-libre/4.12-i686.conf,
gnu/packages/aux-files/linux-libre/4.12-x86_64.conf: Delete files.
* gnu/packages/aux-files/linux-libre/4.13-i686.conf,
gnu/packages/aux-files/linux-libre/4.13-x86_64.conf: New files.
* Makefile.am (AUX_FILES): Adjust accordingly.
 2017-09-04 05:31:07 -04:00
Efraim Flashner 709a3bb7b8
gnu: weechat: Change to cmake-build-system. 
* gnu/packages/irc.scm (weechat)[build-system]: Switch to
cmake-build-system.
[arguments]: Remove configure-flags, disable tets, remove
'autogen phase.
[inputs]: Remove diffutils, libltdl, openssl, cyrus-sasl. Move gettext ...
[native-inputs]: ... to here. Remove autoconf, file, autogen, automake,
libtool.
 2017-09-04 11:21:42 +03:00
Kei Kebreau d10092b849
gnu: Put autoconf-related phases immediately after the 'unpack phase. 
* gnu/packages/audio.scm (audacity, rtmidi)[arguments]: Correct phases
accordingly.
* gnu/packages/bioinformatics.scm (mash, seek, vsearch, emboss,
htslib-for-sambamba)[arguments]: Likewise.
* gnu/packages/ci.scm (cuirass)[arguments]: Likewise.
* gnu/packages/compression.scm (minizip, xdelta)[arguments]: Likewise.
* gnu/packages/cpp.scm (libzen)[arguments]: Likewise.
* gnu/packages/crypto.scm (opendht)[arguments]: Likewise.
* gnu/packages/databases.scm (4store, mdbtools)[arguments]: Likewise.
* gnu/packages/debug.scm (stress-make)[arguments]: Likewise.
* gnu/packages/dns.scm (dnscrypt-proxy, dnscrypt-wrapper)[arguments]:
Likewise.
* gnu/packages/emacs.scm (emacs-pdf-tools)[arguments]: Likewise.
* gnu/packages/embedded.scm (libjaylink, openocd)[arguments]: Likewise.
* gnu/packages/engineering.scm (gerbv)[arguments]: Likewise.
* gnu/packages/erlang.scm (erlang)[arguments]: Likewise.
* gnu/packages/ftp.scm (weex)[arguments]: Likewise.
* gnu/packages/gnome.scm (dia)[arguments]: Likewise.
* gnu/packages/gnunet.scm (gnurl, guile-gnunet)[arguments]: Likewise.
* gnu/packages/gtk.scm (guile-rsvg, graphene)[arguments]: Likewise.
* gnu/packages/guile.scm (guildhall, guile-ics, guile-sqlite3)[arguments]:
Likewise.
* gnu/packages/ibus.scm (ibus-libpinyin)[arguments]: Likewise.
* gnu/packages/irc.scm (weechat)[arguments]: Likewise.
* gnu/packages/java.scm (classpath-devel)[arguments]: Likewise.
* gnu/packages/libreoffice.scm (libetonyek)[arguments]: Likewise.
* gnu/packages/libusb.scm (hidapi)[arguments]: Likewise.
* gnu/packages/linux.scm (gpm)[arguments]: Likewise.
* gnu/packages/logging.scm (glog)[arguments]: Likewise.
* gnu/packages/machine-learning.scm (ghmm)[arguments]: Likewise.
* gnu/packages/mail.scm (dovecot-trees, dovecot-libsodium-plugin, esmtp)
[arguments]: Likewise.
* gnu/packages/messaging.scm (freetalk, libmesode, libstrophe)[arguments]:
Likewise.
* gnu/packages/microcom.scm (microcom)[arguments]: Likewise.
* gnu/packages/ocaml.scm (ocaml-ssl)[arguments]: Likewise.
* gnu/packages/parallel.scm (slurm)[arguments]: Likewise.
* gnu/packages/pdf.scm (libharu)[arguments]: Likewise.
* gnu/packages/samba.scm (cifs-utils)[arguments]: Likewise.
* gnu/packages/serialization.scm (msgpack)[arguments]: Likewise.
* gnu/packages/shells.scm (scsh)[arguments]: Likewise.
* gnu/packages/telephony.scm (libiax2)[arguments]: Likewise.
* gnu/packages/textutils.scm (dotconf)[arguments]: Likewise.
* gnu/packages/version-control.scm (findnewest)[arguments]: Likewise.
* gnu/packages/video.scm (libmediainfo, mediainfo)[arguments]: Likewise.
 2017-09-04 00:10:59 -04:00
Efraim Flashner 5804c7b616
gnu: libmateweather: Update inputs. 
* gnu/packages/mate.scm (libmateweather)[inputs]: Remove gdk-pixpuf.
Move dconf ...
[native-inputs]: ... to here.
 2017-09-03 18:01:12 +03:00
ng0 6a548c56ef
gnu: mate-desktop: Add 'gtk-doc' back to native-inputs. 
* gnu/packages/mate.scm (mate-desktop)[native-inputs]: Uncomment
'gtk-doc' as input.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-03 16:18:15 +03:00
ng0 60692df286
gnu: mate-themes: Update to 3.22.13. 
* gnu/packages/mate.scm (mate-themes): Update to 3.22.13.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-03 16:18:14 +03:00
ng0 68d2eea0b8
gnu: mate-themes: Update inputs. 
* gnu/packages/mate.scm (mate-themes)[inputs]: Remove gtk+, gtk-engines,
murrine. Move gdk-pixbuf ...
[native-inputs]: ... to here. Add gtk+@2.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-03 16:18:11 +03:00
ng0 4915c51986
gnu: mate-icon-theme: Remove 'gtk+' from native-inputs. 
* gnu/packages/mate.scm (mate-icon-theme)[native-inputs]: Remove 'gtk+'.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-03 16:18:08 +03:00
ng0 833b7e0af0
gnu: mate: Use https. 
* gnu/packages/mate.scm (mate-icon-theme)[source, home-page]: Use https.
(mate-themes)[source, home-page]: Likewise.
(mate-desktop)[source, home-page]: Likewise.
(libmateweather)[source, home-page]: Likewise.
(mate-menus)[source, home-page]: Likewise.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-09-03 16:18:04 +03:00
Mark H Weaver 3c7c916161
gnu: icecat: Update to 52.3.0-gnu1 and add more upstream fixes. 
* gnu/packages/gnuzilla.scm (icecat): Update to 52.3.0-gnu1.
[source]: Remove outdated patches and add more selected fixes from
upstream mozilla-esr52.
 2017-09-02 19:50:58 -04:00
Mark H Weaver 9a37764014
gnu: linux-libre@4.9: Update to 4.9.47. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.47.
 2017-09-02 17:46:22 -04:00
Mark H Weaver 3e51cd8c76
gnu: linux-libre@4.4: Update to 4.4.86. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.86.
 2017-09-02 17:45:37 -04:00
Jelle Licht 448339709d
gnu: node: Update to 8.4.0. 
* gnu/packages/patches/node-9077.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/node.scm (node): Update to 8.4.0.
(node)[arguments]: Removed broken linter test. Removed dns test.
 2017-09-02 22:59:18 +02:00
ng0 4da9beab14
gnu: Add emacs-base16-theme. 
* gnu/packages/emacs.scm (emacs-base16-theme): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2017-09-02 22:40:58 +03:00
Oleg Pykhalov eaf4ba6ef3
gnu: Add emacs-browse-at-remote. 
* gnu/packages/emacs.scm (emacs-browse-at-remote): New variable.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2017-09-02 22:40:58 +03:00
Alex Kost 780162c797
gnu: emacs-guix: Update to 0.3.3. 
* gnu/packages/emacs.scm (emacs-guix): Update to 0.3.3.
 2017-09-02 22:40:58 +03:00
Andreas Enge c64692a72d
gnu: pari-gp: Update to 2.9.3. 
* gnu/packages/algebra.scm (pari-gp): Update to 2.9.3.
 2017-09-02 17:11:49 +02:00
Leo Famulari 7bac819614
gnu: rosegarden: Import bash and lirc modules. 
This is a followup to commit 9bc38f2872.

* gnu/packages/music.scm (define-module): Import (gnu packages bash) and
(gnu packages lirc).
 2017-09-02 11:07:57 -04:00
Leo Famulari 631c9f743f
gnu: net-tools: Build from a source archive instead of a Git checkout. 
* gnu/packages/linux.scm (net-tools)[source]: Use url-fetch and adjust
the source URL accordingly.
[native-inputs]: Add UNZIP.
(net-tools-for-tests)[native-inputs]: Add field so that we can exclude UNZIP.
 2017-09-02 11:07:56 -04:00
Marius Bakke aa3542e844
gnu: gdk-pixbuf: Update to 2.36.9. 
* gnu/packages/gtk.scm (gdk-pixbuf): Update to 2.36.9.
[source]: Remove obsolete patch.
* gnu/packages/patches/gdk-pixbuf-list-dir.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-09-02 16:51:10 +02:00
Marius Bakke d0cc3a9879
gnu: gtk+: Update to 3.22.19. 
* gnu/packages/gtk.scm (gtk+): Update to 3.22.19.
 2017-09-02 16:45:34 +02:00
Marius Bakke de02edbf11
gnu: cairo: Update to 1.14.10. 
* gnu/packages/gtk.scm (cairo): Update to 1.14.10.
 2017-09-02 16:45:13 +02:00
Marius Bakke 168c5f076c
gnu: librsvg: Update to 2.40.18. 
* gnu/packages/gnome.scm (librsvg): Update to 2.40.18.
 2017-09-02 16:44:46 +02:00
Marius Bakke 1bb0545bb8
gnu: glib: Update to 2.52.3. 
* gnu/packages/glib.scm (glib): Update to 2.52.3.
 2017-09-02 16:35:04 +02:00
Kei Kebreau d536113df0
gnu: openjpeg: Fix CVE-2017-{14040,14041}. 
* gnu/packages/image.scm (openjpeg)[source]: Add patches.
* gnu/packages/patches/openjpeg-CVE-2017-14040.patch,
gnu/packages/patches/openjpeg-CVE-2017-14041.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2017-09-02 10:21:03 -04:00
Marius Bakke 30dfac27a5
Merge branch 'master' into staging 2017-09-02 15:57:56 +02:00
Marius Bakke d2ee294c04
gnu: pango: Update to 1.40.11. 
* gnu/packages/gtk.scm (pango): Update to 1.40.11.
 2017-09-02 15:54:46 +02:00
Marius Bakke a4a3d93290
gnu: harfbuzz: Update to 1.5.0. 
* gnu/packages/gtk.scm (harfbuzz): Update to 1.5.0.
 2017-09-02 15:54:23 +02:00
Marius Bakke 2ec339c25a
Revert "gnu: lzip: Update to 1.19." 
This reverts commit 0963e3e450.
 2017-09-02 15:50:17 +02:00
Marius Bakke 57cdc1fada
gnu: mesa: Update to 17.1.8. 
* gnu/packages/gl.scm (mesa): Update to 17.1.8.
[source]: Add HTTPS download uri.
 2017-09-02 15:50:17 +02:00
Marius Bakke 53e16a5a0f
gnu: libdrm: Update to 2.4.83. 
* gnu/packages/xdisorg.scm (libdrm): Update to 2.4.83.
[inputs]: Remove LIBPTHREAD-STUBS.
[home-page]: Use HTTPS.
 2017-09-02 15:50:17 +02:00
Marius Bakke 66d4cd7978
gnu: util-linux: Update to 2.30.1. 
* gnu/packages/linux.scm (util-linux): Update to 2.30.1.
 2017-09-02 15:40:44 +02:00
Marius Bakke 9238a9c086
gnu: dbus: Update to 1.10.22. 
* gnu/packages/glib.scm (dbus): Update to 1.10.22.
 2017-09-02 15:40:44 +02:00
Marius Bakke 7035d2dd69
gnu: libva: Update to 1.8.3. 
GitHub is now the canonical distribution point of libva:
<https://github.com/01org/libva/issues/52#issuecomment-303465588>

* gnu/packages/video.scm (libva): Update to 1.8.3.
[source](uri): Add new download location.
 2017-09-02 15:40:44 +02:00
宋文武 65e4109cdc
gnu: emacs-cider: Update to 0.15.0. 
* gnu/packages/emacs.scm (emacs-cider): Update to 0.15.0.
 2017-09-02 21:23:34 +08:00
Danny Milosavljevic 9bc38f2872
gnu: Add rosegarden. 
* gnu/packages/music.scm (rosegarden): New variable.
 2017-09-02 14:29:11 +02:00
Hartmut Goebel 7ae9542bf3
gnu: Add prison. 
* gnu/packages/kde-frameworks.scm (prison): New variable.
 2017-09-02 13:11:31 +02:00
Hartmut Goebel 7ade80220b
gnu: Add libdmtx. 
* gnu/packages/aidc.scm (libdmtx): New variable.
 2017-09-02 13:11:30 +02:00
Marius Bakke 3fe666aa29
gnu: perl-www-opensearch: Enable tests. 
Fixes <https://bugs.gnu.org/28253>.

* gnu/packages/web.scm (perl-www-opensearch)[native-inputs]: Add
PERL-CLASS-ERRORHANDLER, PERL-DATETIME, PERL-DATETIME-FORMAT-MAIL,
PERL-DATETIME-FORMAT-W3CDTF, PERL-FEED-FIND, PERL-MODULE-PLUGGABLE,
PERL-URI-FETCH, PERL-TEST-SIMPLE, PERL-XML-ATOM and PERL-XML-RSS.
 2017-09-02 12:32:51 +02:00
Marius Bakke 47111bb365
gnu: ffmpeg@2.8: Update to 2.8.13. 
* gnu/packages/video.scm (ffmpeg-2.8): Update to 2.8.13.
 2017-09-02 12:08:54 +02:00
Maxim Cournoyer f306825da8
gnu: exiv2: Update source checksum. 
The source archive was updated in place; only a cleanup of non functional
files was done (see: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=28326).

* gnu/packages/image.scm (exiv2)[source]: Update hash.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-09-02 10:40:42 +02:00
Ethan R. Jones 7bd65a6304
gnu: swish-e: Work around compilation error and test failures. 
* gnu/packages/search.scm (swish-e)[inputs]: Remove ZLIB and LIBXML2.
[arguments]: Add #:configure-flags.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-02 00:58:11 +02:00
Muriithi Frederick Muriuki 2038a48f4d
gnu: Add python-xenon. 
* gnu/packages/python.scm (python-xenon, python2-xenon) New variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-02 00:58:11 +02:00
Tobias Geerinckx-Rice 6106d195a2
gnu: perl-html-tree: Update to 5.07. 
* gnu/packages/web.scm (perl-html-tree): Update to 5.07.
 2017-09-01 23:52:19 +02:00
Tobias Geerinckx-Rice 33fd32c285
gnu: youtube-dl: Update to 2017.09.02. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.09.02.
 2017-09-01 23:52:19 +02:00
Tobias Geerinckx-Rice bbfc523d95
gnu: dub: Update to 1.5.0. 
* gnu/packages/ldc.scm (dub): Update to 1.5.0.
 2017-09-01 23:52:19 +02:00
Tobias Geerinckx-Rice def056d138
gnu: perl-context-preserve: Update source URL. 
* gnu/packages/perl.scm (perl-context-preserve)[source]: Update CPAN author.
 2017-09-01 23:52:18 +02:00
Tobias Geerinckx-Rice 0c3a1674e4
gnu: python-ruamel.yaml: Update to 0.15.33. 
* gnu/packages/serialization.scm (python-ruamel.yaml): Update to 0.15.33.
 2017-09-01 23:52:18 +02:00
Tobias Geerinckx-Rice d5909be93b
gnu: gparted: Update home page. 
* gnu/packages/disk.scm (gparted)[home-page]: Use now-HTTPS gparted.org.
 2017-09-01 23:52:18 +02:00
Ricardo Wurmus ebbb6301a3
gnu: r-minimal: Update to 3.4.1. 
* gnu/packages/statistics.scm (r-minimal): Update to 3.4.1.
 2017-09-01 22:05:39 +02:00
Leo Famulari 3bf0245bb8
gnu: vdirsyncer: Update to 0.16.2. 
* gnu/packages/dav.scm (vdirsyncer): Update to 0.16.2.
 2017-09-01 13:54:23 -04:00
Leo Famulari 3a91ac8378
gnu: python-click-log: Update to 0.2.0. 
* gnu/packages/python.scm (python-click-log): Update to 0.2.0.
 2017-09-01 13:54:23 -04:00
Leo Famulari 19ecdbedd3
gnu: python-click-threading: Update to 0.4.3. 
* gnu/packages/python.scm (python-click-threading): Update to 0.4.3.
[source]: Use pypi-uri.
 2017-09-01 13:54:20 -04:00
Leo Famulari 2da21e48a8
gnu: python-icalendar: Update to 3.11.7. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.7.
 2017-09-01 13:41:39 -04:00
Ricardo Wurmus 81195d139f
gnu: r-genomicalignments: Update to 1.12.2. 
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.12.2.
 2017-09-01 15:11:58 +02:00
Ricardo Wurmus 89b620e7ee
gnu: r-tidyr: Update to 0.7.0. 
* gnu/packages/statistics.scm (r-tidyr): Update to 0.7.0.
[propagated-inputs]: Remove r-lazyeval; add r-glue, r-purrr, r-rlang, and
r-tidyselect.
 2017-09-01 15:11:58 +02:00
Ricardo Wurmus c4a4ef39ed
gnu: Add r-tidyselect. 
* gnu/packages/statistics.scm (r-tidyselect): New variable.
 2017-09-01 15:11:58 +02:00
Ricardo Wurmus db2e43863c
gnu: r-vegan: Update to 2.4-4. 
* gnu/packages/bioinformatics.scm (r-vegan): Update to 2.4-4.
[native-inputs]: Remove r-knitr.
 2017-09-01 15:11:57 +02:00
Ricardo Wurmus 7b92acdf52
gnu: r-maldiquant: Update to 1.16.4. 
* gnu/packages/bioinformatics.scm (r-maldiquant): Update to 1.16.4.
 2017-09-01 15:11:57 +02:00
Ricardo Wurmus 6bd27981f6
gnu: r-bookdown: Update to 0.5. 
* gnu/packages/bioinformatics.scm (r-bookdown): Update to 0.5.
 2017-09-01 15:11:56 +02:00
Ricardo Wurmus c62276b2fa
gnu: r-ksamples: Update to 1.2-7. 
* gnu/packages/cran.scm (r-ksamples): Update to 1.2-7.
 2017-09-01 15:11:56 +02:00
Ricardo Wurmus 28f2f89391
gnu: r-distillery: Update to 1.0-4. 
* gnu/packages/cran.scm (r-distillery): Update to 1.0-4.
 2017-09-01 15:11:55 +02:00
Ricardo Wurmus f7b172187a
gnu: r-sp: Update to 1.2-5. 
* gnu/packages/cran.scm (r-sp): Update to 1.2-5.
 2017-09-01 15:11:55 +02:00
Ricardo Wurmus bf958fcd63
gnu: r-ggally: Update to 1.3.2. 
* gnu/packages/cran.scm (r-ggally): Update to 1.3.2.
 2017-09-01 15:11:55 +02:00
Ricardo Wurmus 38ea6cfab4
gnu: r-reshape: Update to 0.8.7. 
* gnu/packages/cran.scm (r-reshape): Update to 0.8.7.
 2017-09-01 15:11:54 +02:00
Ricardo Wurmus eeb5432802
gnu: r-powerlaw: Update to 0.70.1. 
* gnu/packages/cran.scm (r-powerlaw): Update to 0.70.1.
 2017-09-01 15:11:54 +02:00
Ricardo Wurmus a5c2980486
gnu: r-circlize: Update to 0.4.1. 
* gnu/packages/cran.scm (r-circlize): Update to 0.4.1.
 2017-09-01 15:11:54 +02:00
Ricardo Wurmus ea4d4f7616
gnu: r-shape: Update to 1.4.3. 
* gnu/packages/cran.scm (r-shape): Update to 1.4.3.
 2017-09-01 15:11:53 +02:00
Ricardo Wurmus 9077f6d9aa
gnu: r-tclust: Update to 1.3-1. 
* gnu/packages/statistics.scm (r-tclust): Update to 1.3-1.
 2017-09-01 15:11:53 +02:00
Ricardo Wurmus 347cab66b6
gnu: r-fastcluster: Update to 1.1.24. 
* gnu/packages/statistics.scm (r-fastcluster): Update to 1.1.24.
 2017-09-01 15:11:52 +02:00
Ricardo Wurmus d574d6bcc2
gnu: r-rcpparmadillo: Update to 0.7.960.1.2. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.960.1.2.
 2017-09-01 15:11:52 +02:00
Ricardo Wurmus 2dda8fca6f
gnu: r-plotrix: Update to 3.6-6. 
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-6.
 2017-09-01 15:11:51 +02:00
Ricardo Wurmus 7d60652ebe
gnu: r-httr: Update to 1.3.1. 
* gnu/packages/statistics.scm (r-httr): Update to 1.3.1.
[propagated-inputs]: Remove r-digest and r-stringr.
 2017-09-01 15:11:51 +02:00
Ricardo Wurmus e3323e0707
gnu: r-commonmark: Update to 1.4. 
* gnu/packages/statistics.scm (r-commonmark): Update to 1.4.
 2017-09-01 15:11:51 +02:00
Ricardo Wurmus 5d84369bda
gnu: r-ade4: Update to 1.7-8. 
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-8.
 2017-09-01 15:11:50 +02:00
Ricardo Wurmus fb10c923b3
gnu: r-tibble: Update to 1.3.4. 
* gnu/packages/statistics.scm (r-tibble): Update to 1.3.4.
 2017-09-01 15:11:50 +02:00
Ricardo Wurmus edd5fd7208
gnu: r-rlang: Update to 0.1.2. 
* gnu/packages/statistics.scm (r-rlang): Update to 0.1.2.
 2017-09-01 15:11:49 +02:00
Ricardo Wurmus 5a00ef0950
gnu: r-knitr: Update to 1.17. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.17.
 2017-09-01 15:11:49 +02:00
Ricardo Wurmus 3949aef601
gnu: r-bh: Update to 1.65.0-1. 
* gnu/packages/statistics.scm (r-bh): Update to 1.65.0-1.
 2017-09-01 15:11:49 +02:00
Ricardo Wurmus b93881b9c5
gnu: r-scales: Update to 0.5.0. 
* gnu/packages/statistics.scm (r-scales): Update to 0.5.0.
[propagated-inputs]: Add r-r6 and r-viridislite.
 2017-09-01 15:11:48 +02:00
Ricardo Wurmus 2d99a31607
gnu: r-mgcv: Update to 1.8-19. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-19.
 2017-09-01 15:11:48 +02:00
Ricardo Wurmus fefe9f4753
gnu: r-matrix: Update to 1.2-11. 
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-11.
 2017-09-01 15:11:48 +02:00
Ricardo Wurmus 3c2a5bf299
gnu: r-servr: Update to 0.7. 
* gnu/packages/web.scm (r-servr): Update to 0.7.
 2017-09-01 15:11:47 +02:00
Julien Lepiller 1cf306639c
gnu: php: Update to 7.1.9. 
* gnu/packages/php.scm (php): Update to 7.1.9.
 2017-09-01 14:17:46 +02:00
Julien Lepiller dcf7a8a660
gnu: java-slf4j-api: Fix tests. 
* gnu/packages/java.scm (java-slf4j-api)[arguments]: Enable tests
Adjust the jar content to prevent a test failure.
 2017-09-01 14:17:24 +02:00
Z. Ren 5fe2a139df
gnu: djvulibre: Remove timestamps from .svgz files. 
* gnu/packages/djvu.scm (djvulibre)[arguments]: New field.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-01 11:05:32 +02:00
Oleg Pykhalov 833ade67f1
gnu: Add emacs-tuareg. 
* gnu/packages/ocaml.scm (emacs-tuareg): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-01 10:39:55 +02:00
ng0 4735393a76
gnu: emacs-ebuild-mode: Update to 1.37. 
* gnu/packages/emacs.scm (emacs-ebuild-mode): Update to 1.37.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-01 10:34:50 +02:00
ng0 ab966b8f61
gnu: Add emacs-2048-game. 
* gnu/packages/emacs.scm (emacs-2048-game): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-01 10:34:36 +02:00
Ricardo Wurmus 75690c9f6b
gnu: r-rcas: Correct license. 
* gnu/packages/bioinformatics.scm (r-rcas)[license]: Use correct license.
 2017-09-01 10:26:31 +02:00
Ricardo Wurmus eda8f36cd6
gnu: r-rcas: Update to 1.3.3. 
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.3.3.
 2017-09-01 10:26:30 +02:00
Efraim Flashner 7d099cbe13
gnu: mysql: Enable tests on aarch64. 
* gnu/packages/databases.scm (mysql)[arguments]: Remove logic disabling
the tests on aarch64-linux.
 2017-09-01 10:50:39 +03:00
Ben Woodcroft f4bf420c84
gnu: vsearch: Update to 2.4.4. 
* gnu/packages/bioinformatics.scm (vsearch): Update to 2.4.4.
 2017-09-01 14:45:57 +08:00
Ben Woodcroft 25bd1fc1c1
gnu: metabat: Update to 2.12.1. 
* gnu/packages/patches/metabat-remove-compilation-date.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/bioinformatics.scm (metabat): Update to 2.12.1.
[source]: Remove it.  Use url-fetch.
 2017-09-01 14:45:57 +08:00
Thomas Danckaert 43d01672a1
gnu: netcdf: Fix reproducibility issue; remove unneeded references. 
* gnu/packages/maths.scm (netcdf) [arguments]: Add phase to fix the embedded
  'Configured On' date; truncate reference to compiler store item.
 2017-09-01 08:34:32 +02:00
Thomas Danckaert e464b4550e
gnu: hdf4: Avoid unneeded store references to compilers. 
* gnu/packages/maths.scm (hdf4) [arguments]: Add phase 'patch-settings to
  truncate hashes of compiler store items.
 2017-09-01 08:34:32 +02:00
Thomas Danckaert fd0378a147
gnu: hdf5: Avoid unneeded store references to compilers. 
* gnu/packages/maths.scm (hdf5) [arguments]: Add phase to patch
  "libhdf5.settings", removing references to the C/C++/Fortran compilers.
 2017-09-01 08:34:31 +02:00
Thomas Danckaert e3a1a1deda
gnu: hdf5: Add output for fortran interface. 
* gnu/packages/maths.scm (hdf5) [native-inputs]: Add gfortran.
  [outputs]: Add "fortran".
  [arguments]: Enable Fortran compilation; add "/lib" directory of the fortran
  output to the runpath of the Fortran libs; add a 'split phase to move
  all Fortran-related files to the the Fortran output store location.
 2017-09-01 08:34:24 +02:00
Arun Isaac a0596a2f27
gnu: python2-larch: Enable tests. 
* gnu/packages/patches/python2-larch-coverage-4.0a6-compatibility.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python2-larch)[source]: Use it.
[arguments]: Move 'check' phase to before 'build' phase.
 2017-09-01 11:14:16 +05:30
Arun Isaac f618086220
gnu: python2-ttystatus: Enable tests. 
* gnu/packages/python.scm (python2-ttystatus)[arguments]: Replace 'check'
phase with custom function.
 2017-09-01 11:14:16 +05:30
Arun Isaac 689042e526
gnu: python2-cliapp: Enable tests. 
* gnu/packages/python.scm (python2-cliapp)[arguments]: Replace 'check' phase
with custom function.
 2017-09-01 11:14:16 +05:30
Mark H Weaver fe36ecf5c8
gnu: linux-libre: Update to 4.12.10. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.10.
(%linux-libre-hash): Update hash.
 2017-09-01 00:31:55 -04:00
Mark H Weaver 2131663a76
gnu: linux-libre@4.9: Update to 4.9.46. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.46.
 2017-09-01 00:31:16 -04:00
Mark H Weaver d215e41a26
gnu: linux-libre@4.4: Update to 4.4.85. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.85.
 2017-09-01 00:30:17 -04:00
Marius Bakke 1b3f5fc387
gnu: libxml2/fixed: Use patches from inherited package. 
This is a followup to 76fed2b3c4.

* gnu/packages/xml.scm (libxml2/fixed)(patches): Inherit patches from LIBXML2.
 2017-08-31 23:43:55 +02:00
Efraim Flashner 0ff44ba464
gnu: graphicsmagick: Fix CVE-2017-{13775,13776,13777}. 
* gnu/packages/imagemagick.scm (graphicsmagick)[source]: Add patches.
* gnu/packages/patches/graphicsmagick-CVE-2017-13775.patch,
gnu/packages/patches/graphicsmagick-CVE-2017-13776+CVE-2017-13777.patch:
New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2017-09-01 00:02:27 +03:00
Efraim Flashner d36212e94d
gnu: efl: Update to 1.20.3. 
* gnu/packages/enlightenment.scm (efl): Update to 1.20.3.
 2017-09-01 00:02:25 +03:00
Christopher Baines a9d5e4bed1
gnu: Fix current-guix. 
Without this change, I get errors like:
  ERROR: In procedure string-drop:
  ERROR: Value out of range 0 to 35: 51

* gnu/packages/package-management.scm (current-guix): Pass exactly the same
  path to git-predicate and local-file, to ensure that the select? function is
  compatible.
 2017-08-31 21:48:05 +01:00
Marius Bakke fa9f5222a9
gnu: sddm: Update to 0.15.0. 
* gnu/packages/display-managers.scm (sddm): Update to 0.15.0.
[source]: Update tarball name.
[inputs]: Add ELOGIND.
[arguments]: Adjust #:configure-flags for elogind support. Add phase to
patch hard-coded loginctl reference.
 2017-08-31 22:35:54 +02:00
Alex Vong 76fed2b3c4
gnu: libxml2: Fix CVE-2017-{0663,7375,7376,9047,9048,9049,9050}. 
* gnu/packages/patches/libxml2-CVE-2017-0663.patch,
gnu/packages/patches/libxml2-CVE-2017-7375.patch,
gnu/packages/patches/libxml2-CVE-2017-7376.patch,
gnu/packages/patches/libxml2-CVE-2017-9047+CVE-2017-9048.patch,
gnu/packages/patches/libxml2-CVE-2017-9049+CVE-2017-9050.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/xml.scm (libxml2)[replacement]: New field.
(libxml2/fixed): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-31 21:45:36 +02:00
Marius Bakke ff54f194f3
gnu: postgresql: Update to 9.6.5. 
* gnu/packages/databases.scm (postgresql): Update to 9.6.5.

Release-notes: https://www.postgresql.org/docs/9.6/static/release-9-6-5.html
 2017-08-31 21:34:20 +02:00
Ricardo Wurmus 59ff96aafd
gnu: Remove python2-rpy2. 
Python 2 is no longer supported.

* gnu/packages/python.scm (python2-rpy2): Remove variable.
 2017-08-31 18:24:52 +02:00
Ricardo Wurmus deee5ddaf4
gnu: python-rpy2: Update to 2.9.0. 
* gnu/packages/python.scm (python-rpy2): Update to 2.9.0.
[arguments]: Run tests before install phase; add build phase "fix-tests".
[propagated-inputs]: Add python-jinja2 and python-pytz.
[inputs]: Add r-ggplot2, r-rsqlite, r-dplyr, r-dbplyr, and python-numpy.
 2017-08-31 18:24:51 +02:00
Ricardo Wurmus c92483bd63
gnu: python-rpy2: Update license. 
* gnu/packages/python.scm (python-rpy2)[license]: Correct GPLv3+ to GPLv2+;
list additional licenses.
 2017-08-31 18:24:51 +02:00
Ricardo Wurmus caa4e796e4
gnu: Add r-dbplyr. 
* gnu/packages/statistics.scm (r-dbplyr): New variable.
 2017-08-31 18:24:51 +02:00
Kei Kebreau 4eebfefe7e
gnu: retux: Update to 1.3.5. 
* gnu/packages/games.scm (retux): Update to 1.3.5.
 2017-08-31 11:38:00 -04:00
Kei Kebreau 95c1324adc
gnu: python-tmx: Update to 1.10. 
* gnu/packages/game-development.scm (python-tmx): Update to 1.10.
 2017-08-31 11:38:00 -04:00
Kei Kebreau b1d1a10c7c
gnu: python-sge-pygame: Update to 1.5.1. 
* gnu/packages/game-development.scm (python-sge-pygame,
python2-sge-pygame): Update to 1.5.1.
 2017-08-31 11:37:59 -04:00
Marius Bakke 7e31427ff0
gnu: python-pyjwt: Update to 1.5.2 [fixes CVE-2017-11424]. 
* gnu/packages/python.scm (python-pyjwt): Update to 1.5.2.
[source]: Add snippet to remove pre-compiled files.
[native-inputs]: Change PYTHON-PYTEST to PYTHON-PYTEST-3.0.
 2017-08-31 15:45:43 +02:00
Peter Mikkelsen 5883bb76f8
gnu: Add emacs-idris-mode. 
* gnu/packages/emacs.scm (emacs-idris-mode): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-31 14:58:34 +02:00
Peter Mikkelsen b9dcaced16
gnu: Add emacs-prop-menu. 
* gnu/packages/emacs.scm (emacs-prop-menu): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-31 14:57:53 +02:00
Tobias Geerinckx-Rice 79ada57ba9
gnu: knot: Update to 2.5.4. 
* gnu/packages/dns.scm (knot): Update to 2.5.4.
 2017-08-31 13:53:04 +02:00
Paul Garlick 1c25a52c4a
gnu: Add pt-scotch32. 
* gnu/packages/maths.scm (pt-scotch32): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-31 12:34:50 +02:00
Paul Garlick 1c39f3b877
gnu: Add "scotch32". 
* gnu/packages/maths.scm (scotch32): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-31 12:34:50 +02:00
Ben Woodcroft 0691851a64
gnu: bioinformatics: Work around more "dotless @INC" build failures. 
* gnu/packages/bioinformatics.scm (ncbi-vdb, sra-tools)[arguments]: Add
'set-perl-search-path' phase.
 2017-08-31 12:37:05 +08:00
Ben Woodcroft c959e5a1dc
gnu: ruby-2.2.7: Fix CVE-2017-{0899,0900,0901,0902}. 
* gnu/packages/patches/ruby-2.2.7-rubygems-2613-ruby22.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ruby.scm (ruby-2.2.7)[source]: Use it.
 2017-08-31 10:43:19 +08:00
Ben Woodcroft db542518b3
gnu: ruby-2.3.4: Fix CVE-2017-{0899,0900,0901,0902}. 
* gnu/packages/patches/ruby-2.3.4-rubygems-2613-ruby23.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ruby.scm (ruby-2.3.4)[source]: Use it.
 2017-08-31 10:43:19 +08:00
Ben Woodcroft 9770cbf9e2
gnu: ruby-2.4.1: Fix CVE-2017-{0899,0900,0901,0902}. 
* gnu/packages/patches/ruby-rubygems-2612-ruby24.patch,
gnu/packages/patches/ruby-rubygems-2613-ruby24.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/ruby.scm (ruby-2.4.1)[source]: Use them.
 2017-08-31 10:43:19 +08:00
Ben Woodcroft 690a904ad7
gnu: metabat: Update to 2.11.3. 
* gnu/packages/bioinformatics.scm (metabat): Update to 2.11.3.
[source]: Use git-fetch.  Remove boost-related patch.
* gnu/packages/patches/metabat-fix-boost-issue.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-31 10:43:18 +08:00
Marius Bakke 2d2e97bd71
gnu: vlc: Fix build and clean up expression. 
Commit 3e0c54bf4d touches 'configure.ac' which
in turn regenerates 'po/Makefile.in.in' with the wrong SHELL and breaks
install.  While at it, consolidate the other patching phases and remove
unneeded inputs.

* gnu/packages/video.scm (vlc)[arguments]: Consolidate patching phases into a
'patch-source' phase and run it immediately after unpack.
[native-inputs]: Remove AUTOCONF, AUTOMAKE and LIBTOOL.
 2017-08-31 03:43:54 +02:00
Marius Bakke 3e0c54bf4d
gnu: vlc: Recover lost phase. 
This is a followup to eb1f2420d5.

* gnu/packages/video.scm (vlc)[arguments]: Run the fix-livemedia-utils-prefix
phase before configure.
 2017-08-31 03:05:24 +02:00
Marius Bakke 4f68156140
gnu: gd: Replace with 2.2.5. 
Fixes CVE-2017-6362 and CVE-2017-7890.

* gnu/packages/gd.scm (gd)[replacement]: New field.
(gd-2.2.5): New variable.
* gnu/packages/php.scm (gd-for-php): Remove variable
(php)[inputs]: Replace GD-FOR-PHP with GD-2.2.5.
* gnu/packages/patches/gd-CVE-2017-7890.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-31 02:49:43 +02:00
Tobias Geerinckx-Rice cad88b8533
gnu: claws-mail: Update to 3.15.1. 
* gnu/packages/mail.scm (claws-mail): Update to 3.15.1.
 2017-08-31 00:57:46 +02:00
Ludovic Courtès 9ff7161a06
gnu: Add texlive-latex-acmart. 
* gnu/packages/tex.scm (texlive-latex-acmart): New variable.
 2017-08-31 00:03:20 +02:00
Marius Bakke 9749746544
gnu: mbedtls-apache: Update to 2.6.0 [fixes CVE-2017-14032]. 
* gnu/packages/tls.scm (mbedtls-apache): Update to 2.6.0.
 2017-08-30 22:41:40 +02:00
Marius Bakke eb1f2420d5
gnu: vlc: Remove obsolete test workaround. 
* gnu/packages/video.scm (vlc)[arguments]: Drop ac_cv_c_fast_math from
  #:configure-flags.  Remove related 'bootstrap' phase.
 2017-08-30 22:35:45 +02:00
Marius Bakke 552c3e95f3
gnu: vlc: Build with modular qt. 
* gnu/packages/video.scm (vlc)[inputs]: Remove QT.  Add QTBASE and QTX11EXTRAS.
[arguments]: Add CXXFLAGS=-std=gnu++11 to #:configure-flags.  Add
'fix-qt-include' phase.
 2017-08-30 22:22:51 +02:00
Marius Bakke 2de7d137b3
gnu: qemu: Update to 2.10.0. 
* gnu/packages/patches/qemu-CVE-2017-10664.patch,
gnu/packages/patches/qemu-CVE-2017-10806.patch,
gnu/packages/patches/qemu-CVE-2017-10911.patch,
gnu/packages/patches/qemu-CVE-2017-11334.patch,
gnu/packages/patches/qemu-CVE-2017-11434.patch,
gnu/packages/patches/qemu-CVE-2017-12809.patch:
gnu/packages/patches/qemu-CVE-2017-7493.patch,
gnu/packages/patches/qemu-CVE-2017-8112.patch,
gnu/packages/patches/qemu-CVE-2017-8309.patch,
gnu/packages/patches/qemu-CVE-2017-8379.patch,
gnu/packages/patches/qemu-CVE-2017-8380.patch,
gnu/packages/patches/qemu-CVE-2017-9524.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/virtualization.scm (qemu): Update to 2.10.0.
[source](patches): Remove.
 2017-08-30 20:50:13 +02:00
Marius Bakke ffeeda6bab
gnu: jsoncpp: Update to 1.8.2. 
* gnu/packages/serialization.scm (jsoncpp): Update to 1.8.2.
 2017-08-30 20:36:40 +02:00
Ricardo Wurmus 799247d2d9
gnu: multiqc: Update to 1.2. 
* gnu/packages/bioinformatics.scm (multiqc): Update to 1.2.
[source]: Remove patches.
[arguments]: Remove to enable tests.
[propagated-inputs]: Add python-spectra, python-requests, python-markdown,
python-lzstring.
* gnu/packages/patches/multiqc-fix-git-subprocess-error.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-30 17:32:00 +02:00
Ricardo Wurmus 4a7d2009c8
gnu: Add python-spectra. 
* gnu/packages/python.scm (python-spectra, python2-spectra): New variables.
 2017-08-30 17:32:00 +02:00
Ricardo Wurmus beed6abc1d
gnu: Add python-colormath. 
* gnu/packages/python.scm (python-colormath, python2-colormath): New
variables.
 2017-08-30 17:31:59 +02:00
Ricardo Wurmus bac5fd21a1
gnu: python-jinja2: Update to 2.9.6. 
* gnu/packages/python.scm (python-jinja2): Update to 2.9.6.
[arguments]: Add build phase "delete-incompatible-files".
 2017-08-30 17:31:59 +02:00
Ricardo Wurmus e7c76b0661
gnu: Add python-lzstring. 
* gnu/packages/compression.scm (python-lzstring, python2-lzstring): New
variables.
 2017-08-30 17:31:59 +02:00
Kei Kebreau b9319c1e22
gnu: hyperrogue: Update to 10.0g. 
* gnu/packages/games.scm (hyperrogue): Update to 10.0g.
 2017-08-30 07:43:24 -04:00
Arun Isaac a00379e7dc
gnu: Add linkchecker. 
* gnu/packages/web.scm (linkchecker): New variable.
 2017-08-30 12:53:39 +05:30
Thomas Danckaert c93ffc11d0
gnu: kdevelop: Update to 5.1.2. 
* gnu/packages/kde.scm (kdevelop, kdevplatform): Update to 5.1.2.
 2017-08-30 09:20:53 +02:00
Thomas Danckaert e0fbf37350
gnu: coda: Update to 2.18.2. 
* gnu/packages/maths.scm (coda): Update to 2.18.2.
 2017-08-30 09:20:52 +02:00
Stefan Reichör f3f82d1d1f
gnu: Add fzy. 
* gnu/packages/shellutils.scm (fzy): New variable.
 2017-08-30 09:20:52 +02:00
Rutger Helling 9dd14f1e08
gnu: wine: Update to 2.0.2. 
* gnu/packages/wine.scm (wine): Update to 2.0.2.
 2017-08-30 09:20:52 +02:00
Carlo Zancanaro 13035eb2de
gnu: electrum: Update to 2.9.3. 
* gnu/packages/finance.scm (electrum): Update to 2.9.3.
[inputs]: Add python2-pyaes, python2-pysocks. Remove python2-slowaes.
 2017-08-30 09:20:52 +02:00
Carlo Zancanaro 7a276cd945
gnu: Add python-pyaes. 
* gnu/packages/python.scm (python-pyaes, python2-pyaes): New variables.
 2017-08-30 09:20:52 +02:00
Carlo Zancanaro 07e62ae1c2
gnu: Add python-pysocks. 
* gnu/packages/python.scm (python-pysocks, python2-pysocks): New variables.
 2017-08-30 09:20:45 +02:00
Tobias Geerinckx-Rice b85a66b4d5
gnu: dtach: Install man page. 
* gnu/packages/screen.scm (dtach)[arguments]: Install the dtach(1) man page.
 2017-08-30 04:45:43 +02:00
Tobias Geerinckx-Rice 249ab8cc3e
gnu: nginx: Install man page. 
* gnu/packages/web.scm (nginx)[arguments]: Install the nginx(8) man page,
and add a comment about the non-GNU configure script.
 2017-08-30 03:24:19 +02:00
Kei Kebreau 3c8ba11a97
Update e-mail for Kei Kebreau. 
* .mailmap: Map kei@openmailbox.org to current address.
* gnu/local.mk: Replace kei@openmailbox.org to current address.
* gnu/packages/backup.scm: Likewise.
* gnu/packages/calendar.scm: Likewise.
* gnu/packages/check.scm: Likewise.
* gnu/packages/compression.scm: Likewise.
* gnu/packages/documentation.scm: Likewise.
* gnu/packages/emacs.scm: Likewise.
* gnu/packages/fltk.scm: Likewise.
* gnu/packages/freedesktop.scm: Likewise.
* gnu/packages/game-development.scm: Likewise.
* gnu/packages/games.scm: Likewise.
* gnu/packages/gnome.scm: Likewise.
* gnu/packages/gnustep.scm: Likewise.
* gnu/packages/gtk.scm: Likewise.
* gnu/packages/hexedit.scm: Likewise.
* gnu/packages/image.scm: Likewise.
* gnu/packages/maths.scm: Likewise.
* gnu/packages/music.scm: Likewise.
* gnu/packages/xfce.scm: Likewise.
* gnu/packages/python.scm: Likewise.
* gnu/packages/tcl.scm: Likewise.
* gnu/packages/textutils.scm: Likewise.
* gnu/packages/video.scm: Likewise.
* gnu/packages/w3m.scm: Likewise.
* gnu/packages/web.scm: Likewise.
* gnu/packages/web-browsers.scm: Likewise.
* gnu/packages/patches/wmfire-update-for-new-gdk-versions.patch: Likewise.
 2017-08-29 20:13:24 -04:00
Tobias Geerinckx-Rice b1c699c4c0
gnu: perl-tk: Update to 804.034. 
* gnu/packages/tcl.scm (perl-tk): Update to 804.034.
 2017-08-29 23:40:09 +02:00
Tobias Geerinckx-Rice 77217b4393
gnu: font-mathjax, js-mathjax: Remove hard-coded version. 
* gnu/package-s/javascript.scm (font-mathjax, js-mathjax)[arguments]: Re-use
font-mathjax's ‘version’ field instead of duplicating the version number.
 2017-08-29 23:40:09 +02:00
Tobias Geerinckx-Rice d6a7268bae
gnu: font-mathjax: Update to 2.7.2. 
* gnu/packages/javascript.scm (font-mathjax): Update to 2.7.2.
 2017-08-29 23:40:09 +02:00
Tobias Geerinckx-Rice d3f0e09882
gnu: tiled: Update to 1.0.3. 
* gnu/packages/game-development.scm (tiled): Update to 1.0.3.
 2017-08-29 23:40:08 +02:00
Efraim Flashner 08cba8cca4
gnu: libgcrypt: Fix CVE-2017-0379. 
* gnu/packages/gnupg.scm (libgcrypt)[replacement]: New field.
(libgcrypt/fixed): New variable.
 2017-08-29 23:32:16 +03:00
R H 0ae32da8d6
gnu: qtox: Update to 1.11.0. 
* gnu/packages/messaging.scm (qtox): Update to 1.11.0.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-30 01:18:50 +05:30
Christopher Baines 02654c47b2
gnu: Escape @ in the perl-importer package description. 
@EXPORT is interpreted as a texinfo command, therefore the @ needs
escaping. This was causing a test failure in the guix-package.sh file.

* gnu/packages/perl.scm (perl-importer)[description]: Escape @.
 2017-08-29 20:15:46 +01:00
Andy Wingo 69dcad33c8
gnu: emacs-lua-mode: Update to current git. 
* gnu/packages/emacs.scm (emacs-lua-mode): Update; fixes a very annoying bug
with syntax highlighting of multi-line strings.
 2017-08-29 19:52:16 +02:00
Danny Milosavljevic 84d9abe450
gnu: Add python-pyalsaaudio. 
* gnu/packages/audio.scm (python-pyalsaaudio, python2-pyalsaaudio): New
variables.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2017-08-29 20:06:12 +08:00
Efraim Flashner 47deafb81c
gnu: font-gnu-unifont: Update to 10.0.06. 
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.06.
 2017-08-29 12:38:12 +03:00
Nicolas Goaziou 8b618c79e0
gnu: emacs-org: Update to 20170828 
* gnu/packages/emacs.scm (emacs-org): Update to 20170828 (a.k.a. 9.0.10).
 2017-08-28 16:37:12 +02:00
Efraim Flashner 92cc6a5801
gnu: gnupg: Clean up arguments. 
* gnu/packages/gnupg.scm (gnupg)[arguments]: Shorten the
'patch-test-paths phase.
 2017-08-28 17:25:00 +03:00
Efraim Flashner e184de5748
gnu: gnupg: Update to 2.2.0. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.2.0.
[arguments]: Add flag to run more tests.
 2017-08-28 17:24:58 +03:00
Ricardo Wurmus 174fbd5f3b
gnu: r-minimal: Remove timestamp from man page. 
* gnu/packages/statistics.scm (r-minimal)[arguments]: Adjust
"build-reproducibly" phase to prevent the bundled help2man script from
printing the current month and year.
 2017-08-28 15:51:05 +02:00
Efraim Flashner af9bb4cab8
gnu: pspp: Update to 1.0.1. 
* gnu/packages/statistics.scm (pspp): Update to 1.0.1.
 2017-08-28 14:44:41 +03:00
Efraim Flashner 475b99fa5c
gnu: jemalloc: Update to 5.0.1. 
* gnu/packages/jemalloc.scm (jemalloc): Update to 5.0.1.
[inputs]: Add perl.
 2017-08-28 11:53:20 +03:00
Ludovic Courtès a881a40cea
gnu: emacs-nix-mode: Move to package-management.scm. 
Reported by Christopher Baines.
This fixes a top-level reference among mutually-dependent modules.

* gnu/packages/emacs.scm (emacs-nix-mode): Move to...
* gnu/packages/package-management.scm (emacs-nix-mode): ... here.
 2017-08-28 09:56:33 +02:00
Efraim Flashner 15d61488a6
gnu: xf86-video-freedreno: Add missing input. 
* gnu/packages/xorg.scm (xf86-video-freedreno)[inputs]: Add zlib.
 2017-08-28 10:14:25 +03:00
Leo Famulari 9baa969758
gnu: libzip: Fix CVE-2017-12858. 
* gnu/packages/patches/libzip-CVE-2017-12858.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/compression.scm (libzip)[source]: Use it.
 2017-08-27 19:51:45 -04:00
Tobias Geerinckx-Rice 152fc9594e
gnu: srt2vtt: Update source URL. 
* gnu/packages/video.scm (srt2vtt)[source]: Fetch sources from new URL.
 2017-08-28 01:44:44 +02:00
Leo Famulari 51988e3a03
gnu: Give descriptive file-names for some Git sources. 
* gnu/packages/java.scm (classpath-devel)[source]: Set the file-name.
* gnu/packages/guile.scm (guile-for-guile-emacs,
guile-syntax-highlight)[source]: Likewise.
 2017-08-27 18:24:50 -04:00
Leo Famulari 5f13bf0972
gnu: Fetch several Git sources over HTTPS. 
* gnu/packages/admin.scm (interrobang)[source]: Use HTTPS URL.
* gnu/packages/audio.scm (ardour)[source]: Likewise.
* gnu/packages/embedded.scm (libjaylink, openocd)[source]: Likewise.
* gnu/packages/gnome.scm (byzanz)[source]: Likewise.
* gnu/packages/gnunet.scm (guile-gnunet)[source]Likewise.
* gnu/packages/java.scm (classpath)[source]: Likewise.
* gnu/packages/microcom.scm (microcom)[source]: Likewise.
* gnu/packages/python.scm (python-axolotl-curve25519)[source]: Likewise.
* gnu/packages/rdesktop.scm (freerdp)[source]: Likewise.
* gnu/packages/shells.scm (rc)[source]: Likewise.
* gnu/packages/web.scm (libwebsockets)[source]: Use new source URL.
 2017-08-27 18:24:49 -04:00
Tobias Geerinckx-Rice ad539230f1
gnu: youtube-dl: Update to 2017.08.27.1. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.08.27.1.
 2017-08-27 22:58:19 +02:00
Tobias Geerinckx-Rice c10d502423
gnu: iodine: Fix path to ifconfig. 
* gnu/packages/networking.scm (iodine)[arguments]: Fix path to ifconfig.
 2017-08-27 22:23:51 +02:00
Leo Famulari 01f248b606
gnu: filezilla: Update to 3.27.1. 
* gnu/packages/ftp.scm (filezilla): Update to 3.27.1.
 2017-08-27 16:04:31 -04:00
Leo Famulari a9af060e5d
gnu: libfilezilla: Update to 0.10.1. 
* gnu/packages/ftp.scm (libfilezilla): Update to 0.10.1.
[native-inputs]: Add pkg-config.
 2017-08-27 16:04:30 -04:00
Leo Famulari 1c059a6e16
gnu: wxwidgets: Update to 3.0.3. 
* gnu/packages/wxwidgets.scm (wxwidgets): Update to 3.0.3.
[source]: Remove 'wxwidgets-fix-windowGTK.patch'.
* gnu/packages/patches/wxwidgets-fix-windowGTK.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-27 16:04:25 -04:00
Andy Wingo 2999dcd5b7
gnu: gnome: Install some GStreamer plugins. 
* gnu/packages/gnome.scm (gnome): Add gst-plugins-base and gst-plugins-good.
This will allow stock GNOME installs to play Ogg Vorbis files, among other
things.  It will also ensure that GST_PLUGIN_SYSTEM_PATH is set to a sensible
value when GNOME is installed to the system instead of the user profile.
 2017-08-27 20:59:46 +02:00
Andy Wingo 39c853bd61
gnu: totem: Wrap environment for thumbnailer. 
* gnu/packages/gnome.scm (totem): Wrap thumbnailer also in environment that
  sets GST_PLUGIN_SYSTEM_PATH.
 2017-08-27 20:59:35 +02:00
Efraim Flashner ff16170ab9
gnu: nano: Update to 2.8.7. 
* gnu/packages/nano.scm (nano): Update to 2.8.7.
 2017-08-27 16:29:37 +03:00
Marius Bakke ebd181138e
gnu: perl: Work around more "dotless @INC" build failures. 
* gnu/packages/perl.scm (perl-unicode-collate)[arguments]: Add
'set-perl-search-path' phase.
* gnu/packages/xorg.scm (perl-x11-xcb)[arguments]: Likewise.
 2017-08-27 15:07:21 +02:00
Marius Bakke 88d5889c40
gnu: perl-www-opensearch: Provide Module::Install. 
* gnu/packages/web.scm (perl-www-opensearch)[native-inputs]: Add PERL-MODULE-INSTALL.
 2017-08-27 15:07:21 +02:00
Marius Bakke 522f199562
gnu: perl-xml-atom: Update to 0.42. 
* gnu/packages/xml.scm (perl-xml-atom): Update to 0.42.
[arguments]: Add 'set-perl-search-path' phase.
[native-inputs]: Add PERL-HTML-TAGSET and PERL-MODULE-BUILD-TINY.
 2017-08-27 15:07:21 +02:00
Marius Bakke 9978567460
gnu: babl: Update to 0.1.30. 
* gnu/packages/gimp.scm (babl): Update to 0.1.30.
 2017-08-27 15:07:21 +02:00
Marius Bakke b45c050545
gnu: Remove unneeded import. 
* gnu/packages/engineering.scm: Don't import (srfi srfi-1) in top scope.
 2017-08-27 15:07:21 +02:00
Marius Bakke fab46af832
gnu: tdb: Update to 1.3.15. 
* gnu/packages/databases.scm (tdb): Update to 1.3.15.
 2017-08-27 15:07:21 +02:00
Efraim Flashner 6909c24093
gnu: enlightenment: Update to 0.21.9. 
* gnu/packages/enlightenment.scm (enlightenment): Update to 0.21.9.
 2017-08-27 15:53:13 +03:00
Kei Kebreau ab11563797
gnu: xauth: Enable tests. 
* gnu/packages/xorg.scm (xauth)[arguments]: Enable tests.
[native-inputs]: Add cmdtest.
 2017-08-26 15:40:55 -04:00
Kei Kebreau cd669fdeb1
gnu: Add cmdtest. 
* gnu/packages/check.scm (cmdtest): New variable.

Co-authored-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-26 15:26:45 -04:00
Marius Bakke 4028fd395e
Merge branch 'master' into staging 2017-08-26 15:34:29 +02:00
Marius Bakke 72e2815d18
Merge branch 'core-updates' 2017-08-26 15:15:49 +02:00
Andy Wingo c20cd0d24d
gnu: gnome: Depend on xdg-user-dirs. 
* gnu/packages/gnome.scm (gnome): Add xdg-user-dirs dependency.  The presence
  of the autostart file in /run/current-system/profile/etc/xdg should cause
  xdg-user-dirs to be run when a user logs in, ensuring that they have
  ~/Pictures and other well-known user directories.
 2017-08-26 13:37:30 +02:00
Andy Wingo b9bf08f058
gnu: Add xdg-user-dirs. 
* gnu/packages/freedesktop.scm (xdg-user-dirs): New public variable.
 2017-08-26 13:37:19 +02:00
Julien Lepiller 446695775d
gnu: Add radare2. 
* gnu/packages/engineering.scm (radare2): New variable.
 2017-08-26 13:01:36 +02:00
Julien Lepiller f70be0113f
gnu: Add python-capstone. 
* gnu/packages/engineering.scm (python-capstone, python2-capstone): New
variables.
 2017-08-26 13:01:32 +02:00
Julien Lepiller 6febda9443
gnu: Add capstone. 
* gnu/packages/engineering.scm (capstone): New variable.
 2017-08-26 13:01:11 +02:00
Oleg Pykhalov d987a006dc
gnu: youtube-dl: Update to 2017.08.23. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.08.23.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-26 13:35:44 +05:30
宋文武 acf7a958a6
gnu: pv: Update to 1.6.6. 
* gnu/packages/pv.scm (pv): Update to 1.6.6.
 2017-08-26 14:09:05 +08:00
Mark H Weaver 828f0109ee
gnu: linux-libre: Update to 4.12.9. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.9.
(%linux-libre-hash): Update hash.
 2017-08-25 23:53:32 -04:00
Mark H Weaver 50e34c608e
gnu: linux-libre@4.9: Update to 4.9.45. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.45.
 2017-08-25 23:52:58 -04:00
Mark H Weaver cd2247cccd
gnu: linux-libre@4.4: Update to 4.4.84. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.84.
 2017-08-25 23:52:14 -04:00
Marius Bakke 2f837cf7fe
gnu: perl: Add more missing dependencies on Module::Install. 
* gnu/packages/databases.scm (perl-dbix-class, perl-dbix-class-cursor-cached,
  perl-dbix-class-introspectablem2m,
  perl-dbix-class-schema-loader)[native-inputs]: Add PERL-MODULE-INSTALL.
* gnu/packages/web.scm (perl-catalyst-action-renderview,
  perl-catalyst-action-rest, perl-catalyst-authentication-store-dbix-class,
  perl-catalyst-component-instancepercontext, perl-catalyst-model-dbic-schema,
  perl-catalyst-plugin-authentication,
  perl-catalyst-plugin-authorization-roles, perl-catalyst-plugin-configloader,
  perl-catalyst-plugin-session, perl-catalyst-plugin-session-state-cookie,
  perl-catalyst-plugin-stacktrace, perl-catalyst-plugin-static-simple,
  perl-catalyst-traitfor-request-proxybase, perl-catalyst-view-download,
  perl-catalyst-view-json, perl-catalystx-script-server-starman,
  perl-test-www-mechanize, perl-test-www-mechanize-catalyst)[native-inputs]:
  Likewise.
* gnu/packages/xorg.scm (perl-x11-xcb)[native-inputs]: Likewise.
 2017-08-25 22:24:10 +02:00
Marius Bakke a21db79e52
gnu: perl-catalyst-runtime: Update to 5.90115. 
* gnu/packages/web.scm (perl-catalyst-runtime): Update to 5.90115.
[native-inputs]: Add PERL-MODULE-INSTALL.
 2017-08-25 22:23:53 +02:00
Leo Famulari 35131babc1
gnu: go: Update to 1.9. 
* gnu/packages/golang.scm (go-1.8): Replace with ...
(go-1.9): ... new variable.
[arguments]: Adjust the pre-build phase accordingly.
 2017-08-25 12:28:58 -04:00
Andy Wingo e0e6756fbd
gnu: gdm: Fix environment of worker processes and sessions. 
* gnu/packages/gnome.scm (gdm): Get X server path from GDM_X_SERVER
environment variable, and make sure this variable is propagated to internal
sub-processes.  Launch sessions with a reasonable XDG_CONFIG_DIRS setting.
Get the custom GDM conf from the current system's profile.
 2017-08-25 16:01:56 +02:00
Andy Wingo 957dbc0a4d
gnu: gdm: Use proper elogind check, and wrap environment. 
* gnu/packages/gnome.scm (gdm): Use glib-or-gtk-build-system to make sure the
schemas are available to GDM.  Install gdm to /bin to make this happen.  Use a
proper elogind check.
 2017-08-25 16:01:56 +02:00
Andy Wingo af37e6bbd4
gnu: gdm: Look for sessions in /run/current-system. 
* gnu/packages/gnome.scm (gdm): Fix search paths for system sessions.  Use
  /var as localstatedir.  Set a more sensible default path for user sessions.
 2017-08-25 16:01:56 +02:00
Andy Wingo e76008dbc8
gnu: accountsservice: Properly reference shadow. 
* gnu/packages/freedesktop.scm (accountsservice): Fix references to binaries
  provided by the shadow package.
 2017-08-25 16:01:45 +02:00
Efraim Flashner cb8b14f182
gnu: parallel: Update to 20170822. 
* gnu/packages/parallel.scm (parallel): Update to 20170822.
 2017-08-25 09:15:12 +03:00
Mark H Weaver 1934769ba1
gnu: libmikmod: Add fallback source URL, needed for older versions. 
* gnu/packages/sdl.scm (libmikmod)[source]: Add a fallback source URL where
older versions are kept.
 2017-08-25 02:08:52 -04:00
Ricardo Wurmus 0b4f40e4fa
gnu: yoshimi: Update to 1.5.3. 
* gnu/packages/music.scm (yoshimi): Update to 1.5.3.
 2017-08-25 04:55:05 +02:00
Ricardo Wurmus 5cff549c60
gnu: zynaddsubfx: Update to 3.0.2. 
* gnu/packages/music.scm (zynaddsubfx): Update to 3.0.2.
 2017-08-25 04:51:07 +02:00
Ricardo Wurmus 44aca1a3e5
gnu: guile-xcb: Update source URL. 
* gnu/packages/guile-wm.scm (guile-xcb)[source]: Use archived tarball URL.
 2017-08-25 02:15:14 +02:00
Ludovic Courtès 649c438c23
gnu: font-mathjax: Move to javascript.scm. 
This avoids cross-module top-level references.

* gnu/packages/fonts.scm (font-mathjax): Move to...
* gnu/packages/javascript.scm (font-mathjax): ... here.  New variable.
 2017-08-24 23:55:51 +02:00
Ludovic Courtès 87f057c46e
gnu: font-go: Remove reference to 'go-1.4'. 
This avoids circular references at the top level.

* gnu/packages/fonts.scm (font-go)[license]: Remove reference to
GO-1.4.
 2017-08-24 23:55:51 +02:00
Stefan Reichör 84342e2fa9
gnu: Add honcho. 
* gnu/packages/python.scm (python-honcho, python2-honcho): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-24 21:27:23 +02:00
Marius Bakke a251838d67
gnu: maim: Update to 5.4.68. 
* gnu/packages/xdisorg.scm (maim): Update to 5.4.68.
 2017-08-24 21:21:04 +02:00
Marius Bakke 8752fa6cba
gnu: slop: Update to 7.3.49. 
* gnu/packages/xdisorg.scm (slop): Update to 7.3.49.
 2017-08-24 21:21:04 +02:00
Ricardo Wurmus 3f8efbb9a4
gnu: guile-wm: Update source URL. 
* gnu/packages/guile-wm.scm (guile-wm)[source]: Use archived URL.
 2017-08-24 20:42:45 +02:00
Thomas Danckaert 17e56dac12
gnu: libreoffice: Fix icons, enable liblangtag. 
* gnu/packages/libreoffice.scm (libreoffice) [inputs]: Add liblangtag.
  [arguments]: Correct icon names in .desktop files; copy desktop files &
  icons for libreoffice-math and libreoffice-startcenter; enable parallel
  build; enable liblangtag.
 2017-08-24 19:52:16 +02:00
Tobias Geerinckx-Rice 5cdb0cd380
gnu: dovecot: Update to 2.2.32. 
* gnu/packages/mail.scm (dovecot): Update to 2.2.32.
 2017-08-24 16:38:47 +02:00
Efraim Flashner 5fc9b6c108
gnu: lollypop: Use pseudo meson build system. 
* gnu/packages/gnome.scm (lollypop)[arguments]: Disable tests. Delete
configure phase, replace build and install phase with custom phases.
[native-inputs]: Add ninja.
[propagated-inputs]: Move gst-plugins-base ...
[inputs]: ... to here. Add meson.
 2017-08-24 15:33:13 +03:00
Hartmut Goebel e3c13d044f
gnu: libksysguard: Enable more tests (not all working yet). 
* gnu/packages/kde.scm (libksysguard)[arguments]
  <#:phases>'check-setup': Set QT_QPA_PLATFORM=offscreen.
  <#:phases>'check': Enable all tests except of the failing one.
 2017-08-24 12:32:34 +02:00
Arun Isaac 2d6da7942a
gnu: python2-ttystatus: Update to 0.35. 
* gnu/packages/python.scm (python2-ttystatus): Update to 0.35.
 2017-08-24 14:28:41 +05:30
Arun Isaac f6c5821530
gnu: cliapp: Update to 1.20170823. 
* gnu/packages/python.scm (python2-cliapp): Update to 1.20170823.
 2017-08-24 14:20:45 +05:30
Efraim Flashner c47048c328
gnu: datamash: Update to 1.2. 
* gnu/packages/datamash.scm (datamash): Update to 1.2.
 2017-08-24 10:35:00 +03:00
Efraim Flashner f81039058c
gnu: qemu: Fix CVE-2017-12809. 
* gnu/packages/virtualization.scm (qemu)[source]: Add patch.
* gnu/packages/patches/qemu-CVE-2017-12809.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-08-23 21:56:55 +03:00
Efraim Flashner f00e328fd3
gnu: openjpeg: Fix CVE-2017-12982. 
* gnu/packages/image.scm (openjepg)[source]: Add patch.
* gnu/packages/patches/openjpeg-CVE-2017-12982.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-08-23 21:07:07 +03:00
Ricardo Wurmus d7eea7d7ae
gnu: python-scikit-learn: Update to 0.19.0. 
* gnu/packages/python.scm (python-scikit-learn): Update to 0.19.0.
 2017-08-23 17:31:54 +02:00
Rutger Helling cc527b5048
gnu: xpra: Update to 2.1.1. 
* gnu/packages/xorg.scm (xpra): Update to 2.1.1.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2017-08-23 20:38:09 +08:00
Rutger Helling 8a7f958ed9
gnu: higan: Update to 104. 
* gnu/packages/games.scm (higan): Update to 104.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2017-08-23 20:24:15 +08:00
Rutger Helling 56cdca9537
gnu: retroarch: Update to 1.6.7. 
* gnu/packages/games.scm (retroarch): Update to 1.6.7.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2017-08-23 20:13:41 +08:00
Thomas Danckaert 35e657017c
gnu: id3lib: Remove bundled zlib. 
* gnu/packages/mp3.scm (id3lib)[source]: Remove bundled zlib.
[inputs]: Add zlib.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
 2017-08-23 19:58:26 +08:00
Christopher Baines 903e051a71
gnu: libvirt: Wrap with iproute and qemu. 
libvirtd runs qemu if it's configured to use it, and also uses the ip command.

* gnu/packages/virtualization.scm (libvirt)[arguments]: Add wrap-libvirtd
  phase.
 2017-08-23 12:44:21 +01:00
Christopher Baines 0577a3fd92
gnu: Build the shared library for yaml-cpp. 
* gnu/packages/serialization.scm (yaml-cpp)[arguments]: Add
  -DBUILD_SHARED_LIBS=ON to #:configure-flags.
 2017-08-23 10:07:22 +01:00
Marius Bakke 4e58740aff
gnu: whois: Update to 5.2.18. 
* gnu/packages/networking.scm (whois): Update to 5.2.18.
 2017-08-22 23:17:14 +02:00
Marius Bakke 2e4569829e
gnu: Add f2fs-tools. 
* gnu/packages/linux.scm (f2fs-tools): New variable.
 2017-08-22 23:13:42 +02:00
Marius Bakke 7ac2cab8c9
gnu: Add icedtea-web. 
* gnu/packages/java.scm (icedtea-web): New variable.
 2017-08-22 23:02:13 +02:00
ng0 77a0354a36
gnu: gnurl: Update to 7.55.1-3. 
* gnu/packages/gnunet.scm (gnurl): Update to 7.55.1-3.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2017-08-22 21:52:05 +02:00
Ricardo Wurmus bd3a184613
gnu: r-minimal: Do not compress serialized files. 
* gnu/packages/statistics.scm (r-minimal)[arguments]: Replace build phase
"patch-which" with "do-not-compress-serialized-files".
[propagated-inputs]: Move "which" from here...
[inputs]: ...to here.

Fixes <https://bugs.gnu.org/28157>.
 2017-08-22 16:24:24 +02:00
Ricardo Wurmus 6be54a8751
gnu: Add rmath-standalone. 
* gnu/packages/statistics.scm (rmath-standalone): New variable.
 2017-08-22 16:24:24 +02:00
Efraim Flashner 94b179c675
gnu: gst-plugins-bad: Build with wayland support. 
* gnu/packages/gstreamer.scm (gst-plugins-bad)[inputs]: Add wayland.
 2017-08-22 17:04:39 +03:00
Efraim Flashner fe535d81ae
gnu: libraw: Update to 0.18.2. 
* gnu/packages/photo.scm (libraw): Update to 0.18.2.
[source, home-page]: Use https.
 2017-08-22 16:57:59 +03:00
Z. Ren 0e4d822e3f
gnu: skalibs: Build reproducibly. 
* gnu/packages/skarnet.scm (skalibs)[arguments]: Add #:phases.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-22 15:19:49 +02:00
Ludovic Courtès c15374e03d
gnu: libjpeg-turbo: Build reproducibly. 
* gnu/packages/image.scm (libjpeg-turbo)[arguments]: Add #:configure-flags.

Co-authored-by: Z. Ren <zren@dlut.edu.cn>
 2017-08-22 15:19:49 +02:00
Thomas Danckaert 1206c95a49
gnu: python-netcdf4: Update to 1.2.9. 
* gnu/packages/python.scm (python-netcdf4): Update to 1.2.9.
 2017-08-22 09:02:32 +02:00
Thomas Danckaert 5c78db6222
gnu: python-h5py: Update to 2.7.0. 
* gnu/packages/python.scm (python-h5py): Update to 2.7.0.
 2017-08-22 09:02:24 +02:00
Efraim Flashner 285e18e9ae
gnu: terminology: Update to 1.1.0. 
* gnu/packages/enlightenment.scm (terminology): Update to 1.1.0.
[source]: Remove bundled fonts and references to them.
[native-inputs]: Add gettext-minimal.
 2017-08-22 09:49:27 +03:00
Oleg Pykhalov 61b31ac46f
gnu: Update emacs-rainbow-mode to 0.13. 
* gnu/packages/emacs.scm (emacs-rainbow-mode): Update to 0.13.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-22 00:00:56 +02:00
Oleg Pykhalov 86a9b1633c
gnu: python-internetarchive: Update to 1.7.1. 
* gnu/packages/web.scm (python-internetarchive): Update to 1.7.1.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-22 00:00:56 +02:00
Tobias Geerinckx-Rice 58f3d45996
gnu: python-marshmallow: Update to 3.0.0b3. 
* gnu/packages/python.scm (python-marshmallow): Update to 3.0.0b3.
 2017-08-21 22:54:38 +02:00
Tobias Geerinckx-Rice 4ecab114fd
gnu: python-pylast: Update to 1.9.0. 
* gnu/packages/python.scm (python-pylast): Update to 1.9.0.
 2017-08-21 22:54:38 +02:00
Tobias Geerinckx-Rice 3592a57255
gnu: lollypop: Update to 0.9.244. 
* gnu/packages/gnome.scm (lollypop): Update to 0.9.244.
 2017-08-21 22:54:37 +02:00
Tobias Geerinckx-Rice 9f9d2a723f
gnu: gspell: Update to 1.4.2. 
* gnu/packages/gnome.scm (gspell): Update to 1.4.2.
 2017-08-21 22:54:37 +02:00
Marius Bakke 3ce16aeac5
gnu: imagemagick: Update to 6.9.9-9. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-9.
 2017-08-21 22:48:44 +02:00
Marius Bakke 51eecee7b9
gnu: feh: Update to 2.19.3. 
* gnu/packages/image-viewers.scm (feh): Update to 2.19.3.
 2017-08-21 22:48:44 +02:00
Tobias Geerinckx-Rice 88648855f8
gnu: perl-net-dns: Update to 1.12. 
* gnu/packages/networking.scm (perl-net-dns): Update to 1.12.
 2017-08-21 17:38:08 +02:00
Tobias Geerinckx-Rice 46057c0a3f
gnu: zstd: Update to 1.3.1. 
* gnu/packages/compression.scm (zstd): Update to 1.3.1.
 2017-08-21 17:38:07 +02:00
Dave Love 6c171ff47c
gnu: openmpi: Configure without vampirtrace. 
VT is obsoleted by scorep (not currently packaged) and disabling it reduces
the closure considerably.

* mpi.scm (openmpi)[arguments]: Configure without vampirtrace.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-21 17:04:54 +02:00
Dave Love df981d8b36
gnu: openmpi: Modify configuration to reduce closure. 
devel-headers are only for building MCA components, produce a large
closure and aren't normally packaged.  Only the affinity component of
mpi-ext is useful.

* gnu/packages/mpi.scm (openmpi)[arguments]: Don't configure
--with-devel-headers and --enable-mpi-ext=all.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-21 17:04:54 +02:00
Dave Love 0d97d3cbff
gnu: openmpi: Remove references to compiler pathnames in "_info" programs. 
This reduces the closure greatly, but note that the Fortran .mod files are
gfortran version-specific, so there should probably be development packages
for each incompatible version.  (The runtime is supposed to be more-or-less
version-independent unless the libgfortran soname changes.)  There may still
be a case for a separate runtime output.

* gnu/packages/mpi.scm (openmpi)[arguments]: Add "remove-absolute" phase.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-21 17:04:54 +02:00
Dave Love 84bf845abc
gnu: valgrind: Add separate "doc" output. 
* gnu/packages/valgrind.scm (valgrind)[outputs]: New field.
[arguments]: Add 'install-doc' phase.

Co-authored-by: Ludovic Courtès <ludovic.courtes@inria.fr>
 2017-08-21 17:04:54 +02:00
Dave Love 327404aeaa
gnu: openmpi: Remove "static" output. 
--enable-static removes dynamically-loaded MCA components.

* gnu/packages/mpi.scm (openmpi)[outputs]: Remove field.
[arguments]: Don't configure with --enable-static; remove
'move-static-libraries' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-21 17:04:54 +02:00
Dave Love 685bef2bd1
gnu: openmpi: Add separate variant with thread-multiple support. 
* gnu/packages/mpi.scm (openmpi)[arguments]: Remove
"--enable-mpi-thread-multiple".
(openmpi-thread-multiple): New variable.

Signed-off-by: Ludovic Courtès <ludovic.courtes@inria.fr>
 2017-08-21 17:04:54 +02:00
Theodoros Foradis cf684d87d7
gnu: z3: Build Python bindings. 
* gnu/packages/maths.scm (z3): Add python bindings.
[build-system]: Change to cmake-build-system.
[arguments]: Remove "changedir" phase.  Add "bootstrap" and
"make-test-z3" phases; replace the "check" phase.
Add #:configure-flags.  Remove #:test-target.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-21 17:04:53 +02:00
Efraim Flashner bd2e321061
gnu: augeas: Update to 1.8.1. Fixes CVE-2017-7555. 
* gnu/packages/augeas.scm (augeas): Update to 1.8.1.
 2017-08-21 16:02:23 +03:00
Marius Bakke 2718a9cd09
Merge branch 'master' into core-updates 2017-08-21 02:40:37 +02:00
ng0 e904de7ec1
gnu: gnurl: Update to 7.55.1. 
* gnu/packages/gnunet.scm (gnurl): Update to 7.55.1.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2017-08-21 01:05:06 +02:00
Efraim Flashner 1dbd34329b
gnu: vifm: Update to 0.9. 
* gnu/packages/vim.scm (vifm): Update to 0.9.
[source]: Add alternate uri.
[arguments]: Remove build timestamp. Add phase to install vim plugins
into vim plugin directory. Patch more shebangs.
 2017-08-20 23:23:17 +03:00
Efraim Flashner bda6c35093
gnu: pspp: Update to 1.0.0. 
* gnu/packages/statistics.scm (pspp): Update to 1.0.0.
 2017-08-20 21:44:47 +03:00
Marius Bakke 9c4ce3afac
gnu: perl-test-trap: Update to 0.3.2. 
* gnu/packages/perl.scm (perl-test-trap): Update to 0.3.2.
[source, version]: Remove 'v' prefix from version field.
 2017-08-20 17:33:16 +02:00
Marius Bakke 7295a0c020
gnu: perl-test-trap: Add missing dependency on Test::Simple. 
* gnu/packages/perl.scm (perl-test-trap)[native-inputs]: Add PERL-TEST-SIMPLE.
 2017-08-20 17:33:16 +02:00
Tobias Geerinckx-Rice 29a3325708
gnu: bundler: Update to 1.15.4. 
* gnu/packages/ruby.scm (bundler): Update to 1.15.4.
 2017-08-20 16:41:39 +02:00
Tobias Geerinckx-Rice 3fa1b08213
gnu: limnoria: Update to 2017.08.18. 
* gnu/packages/irc.scm (limnoria): Update to 2017.08.18.
 2017-08-20 16:41:39 +02:00
Kei Kebreau 6d7d9d9507
gnu: graphicsmagick: Fix CVE-2017-{12935,12936,12937}. 
* gnu/packages/patches/graphicsmagick-CVE-2017-12935.patch,
gnu/packages/patches/graphicsmagick-CVE-2017-12936.patch,
gnu/packages/patches/graphicsmagick-CVE-2017-12937.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/imagemagick.scm (graphicsmagick)[source]: Use them.
 2017-08-20 08:35:45 -04:00
Ricardo Wurmus a8cd352304
gnu: r-minimal: Work around failure to embed reference to "which". 
* gnu/packages/statistics.scm (r-minimal)[arguments]: Add phase "patch-which".
[native-inputs]: Move "which" from here...
[propagated-inputs]: ...to here.
 2017-08-20 14:00:04 +02:00
Ricardo Wurmus 92a1cb9285
gnu: powertabeditor: Update to 2.0.0-alpha10. 
* gnu/packages/music.scm (powertabeditor): Update to 2.0.0-alpha10.
[arguments]: Remove "set-target-directories" phase; disable additional tests.
 2017-08-20 14:00:04 +02:00
Ricardo Wurmus 17cddc1714
gnu: Add r-annotationfilter. 
* gnu/packages/bioinformatics.scm (r-annotationfilter): New variable.
 2017-08-20 14:00:04 +02:00
Andy Wingo 96d36f385c
gnu: Add gnome-default-applications. 
* gnu/packages/gnome.scm (gnome-default-applications): New public variable.
(gnome): Propagate gnome-default-applications so that nautilus is associated
with folders, not baobab.
 2017-08-20 13:11:06 +02:00
Andy Wingo a9dbefdc9d
gnu: gnome: Propagate font-dejavu. 
* gnu/packages/gnome.scm (gnome): Add font-dejavu to propagated inputs, to
  provide a better default for "Monospace".  Otherwise the terminal looks
  horrible and defaults to Nimbus Mono, a Courier-like face.
 2017-08-20 13:10:56 +02:00
Andy Wingo 50631fe933
gnu: gobby: Re-add Gobby 0.4. 
* gnu/packages/gobby.scm (gobby-0.4): New variable.
 2017-08-20 11:30:43 +02:00
Andy Wingo 63ad9b80c7
gnu: gnome: Propagate more packages. 
* gnu/packages/gnome.scm (gnome): Add additional dependencies, inspired by
  Debian's "gnome-core" package.
 2017-08-20 11:16:56 +02:00
Arun Isaac 97291c0c7c
gnu: gobby: Update to 0.5.0. 
* gnu/packages/gobby.scm (gobby): Update to 0.5.0.
[inputs]: Remove libnet6 and obby. Add libinfinity. Sort.
[arguments]: Add move-executable phase.
 2017-08-20 10:52:56 +05:30
Arun Isaac 6a84ec8eb3
gnu: Add libinfinity. 
* gnu/packages/gobby.scm (libinfinity): New variable.
 2017-08-20 10:52:55 +05:30
Leo Famulari 36ed934dfe
gnu: icedtea@3: Update to 3.5.1. 
* gnu/packages/java.scm (icedtea-8): Update to 3.5.1.
 2017-08-19 18:50:04 -04:00
Leo Famulari 0c2e2b660d
gnu: icedtea@2: Update to 2.6.11 [security fixes]. 
Fixes CVE-2017-{10053,10067,10074,10081,10087,10089,10090,10096,10101,10102,
10107,10108,10109,10110,10111,10115,10116,10118,10135,10074,10176}.

* gnu/packages/java.scm (icedtea-7): Update to 2.6.11.
 2017-08-19 18:50:01 -04:00
Thomas Danckaert 7b87132f6e
gnu: libreoffice: Update to 5.3.5.2. 
* gnu/packages/libreoffice.scm (libreoffice): Update to 5.3.5.2.
 2017-08-19 22:46:03 +02:00
Efraim Flashner 128c9b9269
gnu: perl-www-mechanize: Update source uri. 
* gnu/packages/web.scm (perl-www-mechanize)[source]: Update to new uri.
 2017-08-19 21:52:22 +03:00
Marius Bakke 7eb09e39ed
gnu: perl-net-server: Update to 2.009. 
* gnu/packages/web.scm (perl-net-server): Update to 2.009.
 2017-08-19 16:43:38 +02:00
Marius Bakke 68d5906c06
gnu: perl-www-mechanize: Update to 1.86. 
* gnu/packages/web.scm (perl-www-mechanize): Update to 1.86.
[native-inputs]: Add PERL-TEST-DEEP, PERL-TEST-FATAL, PERL-TEST-OUTPUT and
PERL-TEST-WARNINGS.
[propagated-inputs]: Add PERL-HTML-TREE.
 2017-08-19 16:43:37 +02:00
Marius Bakke f87c1107d6
gnu: perl: Work around more "dotless @INC" build issues. 
* gnu/packages/perl.scm (perl-hash-fieldhash,
  perl-string-camelcase)[arguments]: Add 'set-perl-search-path' phase.
 2017-08-19 16:43:37 +02:00
Marius Bakke 1cd5f1776d
gnu: perl-moosex-types-datetime: Update to 0.13. 
* gnu/packages/perl.scm (perl-moosex-types-datetime): Update to 0.13.
 2017-08-19 16:43:37 +02:00
Marius Bakke 55cca6ac61
gnu: perl-plack-middleware-reverseproxy: Provide Module::Install. 
* gnu/packages/web.scm (perl-plack-middleware-reverseproxy)[native-inputs]:
Add PERL-MODULE-INSTALL.
 2017-08-19 16:43:37 +02:00
Tobias Geerinckx-Rice e121be1e15
gnu: python-netaddr: Update to 0.7.19. 
* gnu/packages/python.scm (python-netaddr): Update to 0.7.19.
 2017-08-19 02:17:43 +02:00
Tobias Geerinckx-Rice b7585ca3b9
gnu: lz4: Update to 1.8.0. 
* gnu/packages/compression.scm (lz4): Update to 1.8.0.  Fix typo in comment.
[source]: Remove patch.
* gnu/packages/patches/lz4-fix-test-failures.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-19 02:17:42 +02:00
Tobias Geerinckx-Rice 00d9124d40
gnu: lz4: Use recommended home page. 
* gnu/packages/compression.scm (lz4)[home-page]: Use lz4.org.
 2017-08-19 02:17:42 +02:00
Tobias Geerinckx-Rice 865aacc9fa
gnu: Remove libgames-support. 
It was simply the old name (and version) of libgnome-games-support.

* gnu/packages/gnome.scm (libgames-support): Remove variable.  Move the
inherited fields...
(libgnome-games-support): ...to here.
 2017-08-19 02:17:41 +02:00
Leo Famulari d9f15d7e48
gnu: newsbeuter: Fix CVE-2017-12904. 
* gnu/packages/patches/newsbeuter-CVE-2017-12904.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/syndication.scm (newsbeuter)[source]: Use it.
 2017-08-18 17:24:47 -04:00
Marius Bakke 8c0c0c4def
gnu: python-pygit2: Update to 0.26.0. 
* gnu/packages/python.scm (python-pygit2): Update to 0.26.0.
* gnu/packages/patches/python-pygit2-disable-network-tests.patch: Skip one
more test. Use unittest.skipIf instead of deleting sections.
 2017-08-18 21:33:31 +02:00
Tobias Geerinckx-Rice 9d1cc6bc69
gnu: bluez: Update to 5.46. 
* gnu/packages/linux.scm (bluez): Update to 5.46.
 2017-08-18 15:10:08 +02:00
Tobias Geerinckx-Rice 911c42de40
gnu: cunit: Use ‘modify-phases’ syntax. 
* gnu/packages/check.scm (cunit)[arguments]: Use ‘modify-phases’.
 2017-08-18 15:08:35 +02:00
Tobias Geerinckx-Rice 0963e3e450
gnu: lzip: Update to 1.19. 
* gnu/packages/compression.scm (lzip): Update to 1.19.
[description]: Fix minor typo.
 2017-08-18 15:08:25 +02:00
Tobias Geerinckx-Rice 1f9c2351d7
gnu: gnome-shell: Update to 3.24.3. 
* gnu/packages/gnome.scm (gnome-shell): Update to 3.24.3.
 2017-08-18 14:55:01 +02:00
Tobias Geerinckx-Rice cd5db77151
gnu: gnome-control-center: Update to 3.24.3. 
* gnu/packages/gnome.scm (gnome-control-center): Update to 3.24.3.
 2017-08-18 14:55:01 +02:00
Tobias Geerinckx-Rice d95d6d931e
gnu: gnome-keyring: Update to 3.20.1. 
* gnu/packages/gnome.scm (gnome-keyring): Update to 3.20.1.
 2017-08-18 14:55:00 +02:00
Tobias Geerinckx-Rice 32d00d78dc
gnu: libgnome-games-support: Update to 1.2.2. 
* gnu/packages/gnome.scm (libgnome-games-support): Update to 1.2.2.
 2017-08-18 14:55:00 +02:00
Tobias Geerinckx-Rice 9d086c075d
gnu: gjs: Update to 1.48.6. 
* gnu/packages/gnome.scm (gjs): Update to 1.48.6.
 2017-08-18 14:55:00 +02:00
Tobias Geerinckx-Rice 69d0674830
gnu: shotwell: Update to 0.26.3. 
* gnu/packages/gnome.scm (shotwell): Update to 0.26.3.
 2017-08-18 14:54:59 +02:00
Tobias Geerinckx-Rice 7c94a3599e
gnu: totem-pl-parser: Update to 3.10.8. 
* gnu/packages/gnome.scm (totem-pl-parser): Update to 3.10.8.
 2017-08-18 14:54:59 +02:00
Tobias Geerinckx-Rice 94793c1d0a
gnu: perl-crypt-openssl-bignum: Update to 0.08. 
* gnu/packages/tls.scm (perl-crypt-openssl-bignum): Update to 0.08.
 2017-08-18 14:54:59 +02:00
Thomas Danckaert 598b5481a4
gnu: freerdp: Update inputs. 
* gnu/packages/rdesktop.scm (freerdp) [native-inputs]: Add libxslt, libxml2
  and docbook-xsl.
  [inputs]: Add libjpeg, remove gstreamer, gst-plugins-base, libxml2 and
  libxslt.
  [arguments]: Enable features JPEG and SSE2 (on x86_64), and set up
  docbook-xsl.
 2017-08-18 14:52:35 +02:00
Thomas Danckaert cc81f1c349
gnu: freerdp: Revert to version 1.1. 
* gnu/packages/rdesktop.scm (freerdp) [version, source]: Revert to upstream
  branch 1.1.  [inputs]: Use ffmpeg-2.8.
* gnu/packages/gnome.scm (vinagre): Add patches required to build against
  freerdp branch 1.1.
* gnu/packages/patches/vinagre-revert-1.patch,
  gnu/packages/patches/vinagre-revert-2.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
 2017-08-18 14:52:35 +02:00
Efraim Flashner c5a856d551
gnu: xf86-video-siliconmotion: Fix building on aarch64. 
* gnu/packages/xorg.scm (xf86-video-siliconmotion)[source]: Add patch.
* gnu/packages/patches/xf86-video-siliconmotion-fix-ftbfs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-08-18 15:50:25 +03:00
Efraim Flashner d983a1cb8e
gnu: libksysguard: Update to 5.10.4. 
* gnu/packages/kde.scm (libksysguard ): Update to 5.10.4.
 2017-08-18 15:50:23 +03:00
Efraim Flashner de5a235c79
gnu: kde-framework: Update to 5.37.0. 
* gnu/packages/kde-frameworks.scm (extra-cmake-modules, attica,
bluez-qt, breeze-icons, kapidox, karchive, kcodecs, kconfig,
kcoreaddons, kdbusaddons, kdnssd, kguiaddons, kil8n, kidletime,
kitemmodules, kplotting, ksyntaxhighlighting, kwayland, kwidgetsaddons,
kwindowsystem, modemmanager-qt, networkmanager-qt, oxygen-icons, solid,
sonnet, threadweaver, kauth, kcompletion, kcrash, kimageformats,
kjobwidgets, knotifications, kpackage, kpty, kunitconversion, baloo,
kactivities, kactivities-stats, kbookmarks, kcmutils, kconfigwidgets,
kdeclarative, kded, kdesignerplugin, kdesu, kemoticons, kglobalaccel,
kiconthemes, kinit, kio, knewstuff, knotifyconfig, kparts, kpeople,
krunner, kservice, ktexteditor, ktextwidgets, kwallet, kxmlgui,
kxmlrpcclient, plasma-framework, kde-framworkintegration,
kdelibs4support, khtml, kjs, kjsembed, kmediaplayer, kross): Update to 5.37.0.
(bluez-qt)[arguments]: Disable tests.
(kcodecs, khtml)[native-inputs]: Add gperf.
(ksyntaxhighlighting)[properties]: New field, add upstream-name.
(kimageformats, baloo)[arguments]: Add phase to disable failing test.
(krunner)[inputs]: Add kwindowsystem.
 2017-08-18 15:50:22 +03:00
Efraim Flashner 26ca43bb60
gnu: freeipmi: Update to 1.5.7. 
* gnu/packages/freeipmi.scm (freeipmi): Update to 1.5.7.
 2017-08-18 15:50:20 +03:00
Nicolas Goaziou 1286ff6161
gnu: giac-xcas: Update to 1.2.3-57. 
* gnu/packages/algebra.scm (giac-xcas): Update to 1.2.3-57.
 2017-08-18 14:31:06 +02:00
Arun Isaac c5361b7c3d
gnu: Add rtl-sdr. 
* gnu/packages/ham-radio.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/ham-radio.scm (rtl-sdr): New variable.
 2017-08-18 16:54:58 +05:30
Tobias Geerinckx-Rice 2559401037
gnu: youtube-dl: Update to 2017.08.18. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.08.18.
 2017-08-18 08:11:45 +02:00
Tobias Geerinckx-Rice 2c7321eaa7
gnu: libconfuse: Update to 3.2.1. 
* gnu/packages/wm.scm (libconfuse): Update to 3.2.1.
 2017-08-18 08:11:45 +02:00
Eric Bavier 623cc34cd2
gnu: rpm: Update to 4.13.0.1. 
* gnu/packages/package-management.scm (rpm): Update to 4.13.0.1
[source]: Remove patch.  Use 'version-major+minor' for url.
* gnu/packages/patches/rpm-CVE-2014-8118.patch: Delete patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-17 21:39:18 -05:00
Arun Isaac 52d445f130
gnu: Add rss-bridge. 
* gnu/packages/web.scm (rss-bridge): New variable.
 2017-08-18 07:18:04 +05:30
Marius Bakke 961012a0a0
gnu: Add missing import. 
This is a followup to d016b60fa3.

* gnu/packages/networking.scm (gnu): Use (gnu packages glib).
 2017-08-18 00:48:25 +02:00
Dave Love a099570249
gnu: openmpi: Add RDMA and libfabric support. 
* gnu/packages/mpi.scm (openmpi)[inputs]: Add rdma-core, libfabric.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-18 00:36:28 +02:00
Dave Love ae5947b0ef
gnu: Add libfabric. 
* gnu/packages/linux.scm (libfabric): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-18 00:36:28 +02:00
Dave Love 3eb7c00038
gnu: libnl: Add "python2" and "python3" outputs. 
* gnu/packages/linux.scm (libnl)[native-inputs]: Add SWIG and PKG-CONFIG.
[inputs]: Add PYTHON-2 and PYTHON-3.
[outputs]: Add python2, python3.
[arguments]: Add 'install-python' phase.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-18 00:36:27 +02:00
Dave Love d80a47f2f5
gnu: libnl: Add "doc" output. 
* gnu/packages/linux.scm (libnl)[native-inputs]: Add doc origin.
[outputs]: New field.
[arguments]: Add 'install-doc' phase. New field.

Co-authored-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-18 00:36:27 +02:00
Nicolas Goaziou d016b60fa3
gnu: wireshark: Update to 2.4.0. 
* gnu/packages/networking.scm (wireshark): Update to 2.4.0.  Add "libssh",
  "libxml2", "qtbase" and "qttools" as inputs.  Remove unused "bison", "flex"
  and "gtk+" inputs.
 2017-08-18 00:17:24 +02:00
Marius Bakke 9fa0c0e6fa
gnu: libmspack: Update to 0.6 [fixes CVE-2017-{6419,11423}]. 
* gnu/packages/compression.scm (libmspack): Update to 0.6.
 2017-08-17 22:32:51 +02:00
Mark H Weaver 2d72ddf529
gnu: linux-libre: Update to 4.12.8. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.8.
(%linux-libre-hash): Update hash.
 2017-08-17 14:41:18 -04:00
Mark H Weaver 1e070766c0
gnu: linux-libre@4.9: Update to 4.9.44. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.44.
 2017-08-17 14:40:29 -04:00
Mark H Weaver 821f18719d
gnu: linux-libre@4.4: Update to 4.4.83. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.83.
 2017-08-17 14:39:31 -04:00
Manolis Ragkousis e9a599cdce
gnu: Add OpenMW. 
* gnu/packages/game-development.scm (openmw): New variable.
 2017-08-17 19:40:33 +03:00
Manolis Ragkousis 42d0d13de8
gnu: Add mygui. 
* gnu/packages/game-development.scm (mygui): New variable.
 2017-08-17 19:35:28 +03:00
Manolis Ragkousis dd75a9a22c
gnu: Add ogre. 
* gnu/packages/graphics.scm (ogre): New variable.
 2017-08-17 19:11:35 +03:00
Ricardo Wurmus bf3fa99654
gnu: Add r-methylkit. 
* gnu/packages/bioinformatics.scm (r-methylkit): New variable.
 2017-08-17 18:00:17 +02:00
Ricardo Wurmus 8a39e4a553
gnu: sassc: Update to 3.4.5. 
* gnu/packages/web.scm (sassc): Update to 3.4.5.
[arguments]: Add PREFIX to make-flags, disable tests, remove custom install
phase.
 2017-08-17 18:00:17 +02:00
Alex Vong f30ff28b96
gnu: mariadb: Update to 10.1.26 [fixes CVE-2017-{3636,3641,3653}]. 
* gnu/packages/databases.scm (mariadb): Update to 10.1.26.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-08-17 11:40:29 -04:00
Ricardo Wurmus 05e8a3ef0f
gnu: Add r-ksamples. 
* gnu/packages/cran.scm (r-ksamples): New variable.
 2017-08-17 17:26:13 +02:00
Ricardo Wurmus abcb849405
gnu: Add r-suppdists. 
* gnu/packages/cran.scm (r-suppdists): New variable.
 2017-08-17 17:26:12 +02:00
Ricardo Wurmus 8d22007380
gnu: Add r-energy. 
* gnu/packages/cran.scm (r-energy): New variable.
 2017-08-17 17:26:12 +02:00
Ricardo Wurmus 6b4a9aec23
gnu: Add r-fitdistrplus. 
* gnu/packages/cran.scm (r-fitdistrplus): New variable.
 2017-08-17 17:26:12 +02:00
Ricardo Wurmus 521e0703d8
gnu: Add r-limsolve. 
* gnu/packages/cran.scm (r-limsolve): New variable.
 2017-08-17 17:26:12 +02:00
Ricardo Wurmus a3e36d3772
gnu: Add r-lpsolve. 
* gnu/packages/cran.scm (r-lpsolve): New variable.
 2017-08-17 17:26:12 +02:00
Ricardo Wurmus 212f612040
gnu: Add r-qvalue. 
* gnu/packages/bioinformatics.scm (r-qvalue): New variable.
 2017-08-17 17:26:12 +02:00
Ricardo Wurmus d4a1e918cb
gnu: Add r-fastseg. 
* gnu/packages/bioinformatics.scm (r-fastseg): New variable.
 2017-08-17 17:26:11 +02:00
Ricardo Wurmus b31e4a9693
gnu: Add r-emdbook. 
* gnu/packages/cran.scm (r-emdbook): New variable.
 2017-08-17 17:26:11 +02:00
Ricardo Wurmus 97cb349dc1
gnu: r-trimcluster: Update license. 
* gnu/packages/statistics.scm (r-trimcluster)[license]: Also specify GPLv3+.
 2017-08-17 17:26:11 +02:00
Ricardo Wurmus 8c72b83096
gnu: Add r-bbmle. 
* gnu/packages/cran.scm (r-bbmle): New variable.
 2017-08-17 17:26:11 +02:00
Ricardo Wurmus d6b156dc04
gnu: Add r-inline. 
* gnu/packages/cran.scm (r-inline): New variable.
 2017-08-17 17:26:11 +02:00
Ricardo Wurmus 062b6dbd25
gnu: Add r-lmtest. 
* gnu/packages/cran.scm (r-lmtest): New variable.
 2017-08-17 17:26:11 +02:00
Ricardo Wurmus 58db98c9f2
gnu: Add r-extremes. 
* gnu/packages/cran.scm (r-extremes): New variable.
 2017-08-17 17:26:10 +02:00
Ricardo Wurmus 28476b4bc0
gnu: Add r-distillery. 
* gnu/packages/cran.scm (r-distillery): New variable.
 2017-08-17 17:26:10 +02:00
Ricardo Wurmus 6427e62005
gnu: Add r-lmoments. 
* gnu/packages/cran.scm (r-lmoments): New variable.
 2017-08-17 17:26:10 +02:00
Ricardo Wurmus e389d10f55
gnu: Add r-rmtstat. 
* gnu/packages/cran.scm (r-rmtstat): New variable.
 2017-08-17 17:26:10 +02:00
Ricardo Wurmus b723dedf81
gnu: Add r-rook. 
* gnu/packages/web.scm (r-rook): New variable.
 2017-08-17 17:26:10 +02:00
Ricardo Wurmus bc0081e76f
gnu: Add r-sp. 
* gnu/packages/cran.scm (r-sp): New variable.
 2017-08-17 17:26:10 +02:00
Ricardo Wurmus 3349faecf5
gnu: Add r-proxy. 
* gnu/packages/cran.scm (r-proxy): New variable.
 2017-08-17 17:26:10 +02:00
Ricardo Wurmus ac8402072b
gnu: Add r-ggally. 
* gnu/packages/cran.scm (r-ggally): New variable.
 2017-08-17 17:26:09 +02:00
Ricardo Wurmus c9c6f4b543
gnu: Add r-progress. 
* gnu/packages/cran.scm (r-progress): New variable.
 2017-08-17 17:26:09 +02:00
Ricardo Wurmus 71be51d531
gnu: Add r-reshape. 
* gnu/packages/cran.scm (r-reshape): New variable.
 2017-08-17 17:26:09 +02:00
Ricardo Wurmus 18a16ceb7c
gnu: Add r-prettyunits. 
* gnu/packages/cran.scm (r-prettyunits): New variable.
 2017-08-17 17:26:09 +02:00
Ricardo Wurmus 49c9c29790
gnu: Add r-ffbase. 
* gnu/packages/cran.scm (r-ffbase): New variable.
 2017-08-17 17:26:09 +02:00
Ricardo Wurmus a7f0faa204
gnu: Add r-ff. 
* gnu/packages/cran.scm (r-ff): New variable.
 2017-08-17 17:26:09 +02:00
Ricardo Wurmus f2e974e1a2
gnu: Add r-fastmatch. 
* gnu/packages/cran.scm (r-fastmatch): New variable.
 2017-08-17 17:26:09 +02:00
Ricardo Wurmus e0268ff2e4
gnu: Add r-getoptlong. 
* gnu/packages/cran.scm (r-getoptlong): New variable.
 2017-08-17 17:26:08 +02:00
Ricardo Wurmus d3c67e1b45
gnu: Add r-dendextend. 
* gnu/packages/cran.scm (r-dendextend): New variable.
 2017-08-17 17:26:08 +02:00
Ricardo Wurmus 0548660420
gnu: Add r-compare. 
* gnu/packages/cran.scm (r-compare): New variable.
 2017-08-17 17:26:08 +02:00
Ricardo Wurmus eb60149eee
gnu: Add r-png. 
* gnu/packages/image.scm (r-png): New variable.
 2017-08-17 17:26:08 +02:00
Ricardo Wurmus 5cc79c9c50
gnu: Add r-powerlaw. 
* gnu/packages/cran.scm (r-powerlaw): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus 2856369fad
gnu: Add r-circlize. 
* gnu/packages/cran.scm (r-circlize): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus 4847a62ea9
gnu: Add r-globaloptions. 
* gnu/packages/cran.scm (r-globaloptions): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus 2bdb5c3f78
gnu: Add r-shape. 
* gnu/packages/cran.scm (r-shape): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus c69d27db57
gnu: Add r-calibrate. 
* gnu/packages/cran.scm (r-calibrate): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus 33ce12e293
gnu: Add r-auc. 
* gnu/packages/cran.scm (r-auc): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus 4a007ffafe
gnu: Add r-annotationhub. 
* gnu/packages/bioinformatics.scm (r-annotationhub): New variable.
 2017-08-17 17:25:47 +02:00
Ricardo Wurmus 5f96f30f5d
gnu: Add r-interactivedisplaybase. 
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): New variable.
 2017-08-17 17:25:46 +02:00
Efraim Flashner a71fd67175
gnu: american-fuzzy-lop: Update to 2.49b. 
* gnu/packages/debug.scm (american-fuzzy-lop): Update to 2.49b.
 2017-08-17 18:17:00 +03:00
Efraim Flashner aacefef222
gnu: american-fuzzy-lop: Add support for non-Intel architectures. 
* gnu/packages/debug.scm (americal-fuzzy-lop): Add qemu target for
non-Intel targets.
[arguments]: On non-Intel systems, add phase to disable non-Intel
architecture warning and remove incompatible binaries.
 2017-08-17 18:16:57 +03:00
Nicolas Goaziou 721e1987d0
gnu: Add mgba. 
* gnu/packages/games.scm (mgba): New public variable.
 2017-08-17 10:56:04 +02:00
Ricardo Wurmus a6d05444ab
gnu: cuirass: Update to 0.0.1-7.6f85bc0. 
* gnu/packages/ci.scm (cuirass): Update to 0.0.1-7.6f85bc0.
[arguments]: Add guile-git and guile-bytestructures to the load path.
[inputs]: Remove git, add guile-git and guile-bytestructures.
 2017-08-17 09:12:46 +02:00
Efraim Flashner e3b861ce38
gnu: python-cython: Update to 0.26. 
* gnu/packages/python.scm (python-cython, python2-cython): Update to 0.26.
[source]: Remove patch.
* gnu/packages/patches/python-cython-fix-tests-32bit.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-17 06:46:06 +03:00
Danny Milosavljevic d6ef422fe7
gnu: Add fbreader. 
* gnu/packages/ebook.scm (fbreader): New variable.
 2017-08-17 02:00:51 +02:00
Danny Milosavljevic 84a52639c9
gnu: Add liblinebreak. 
* gnu/packages/ebook.scm (liblinebreak): New variable.
 2017-08-17 01:56:38 +02:00
Tobias Geerinckx-Rice f73f1f0769
gnu: python-cryptography-vectors: Update to 2.0.3. 
* gnu/packages/python.scm (python-cryptography-vectors): Update to 2.0.3.
 2017-08-16 22:35:11 +02:00
Tobias Geerinckx-Rice f37995fa20
gnu: python-cryptography: Update to 2.0.3. 
* gnu/packages/python.scm (python-cryptography): Update to 2.0.3.
 2017-08-16 22:35:10 +02:00
Tobias Geerinckx-Rice f886e7cab1
gnu: limnoria: Update to 2017.08.03. 
* gnu/packages/irc.scm (limnoria): Update to 2017.08.03.
 2017-08-16 22:35:10 +02:00
Tobias Geerinckx-Rice e2a4c13023
gnu: cbatticon: Update to 1.6.6. 
* gnu/packages/admin.scm (cbatticon): Update to 1.6.6.
 2017-08-16 22:35:10 +02:00
Julien Lepiller f207984985
gnu: Add gpick. 
* gnu/packages/image.scm (gpick): New variable.
 2017-08-16 21:37:33 +03:00
ng0 d0b13d7b9b
gnu: fossil: Update to 2.2. 
* gnu/packages/version-control.scm (fossil): Update to 2.2.
[source]: Add uri for older versions.
[arguments]: Enable previously disabled test.
 2017-08-16 21:37:32 +03:00
Efraim Flashner ab1bd285db
gnu: connman: Update to 1.35. 
* gnu/packages/connman.scm (connman): Update to 1.35.
 2017-08-16 21:37:29 +03:00
Kei Kebreau e664200c0c
gnu: Add ltris. 
* gnu/packages/games.scm (ltris): New variable.
 2017-08-16 11:28:12 -04:00
Alex Vong af4db693db
gnu: Add ghc-gitrev. 
* gnu/packages/haskell.scm (ghc-gitrev): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:39 +02:00
Alex Vong e0ca14c7a8
gnu: Add ghc-geniplate-mirror. 
* gnu/packages/haskell.scm (ghc-geniplate-mirror): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:39 +02:00
Alex Vong 298af2a8da
gnu: Add ghc-monadplus. 
* gnu/packages/haskell.scm (ghc-monadplus): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:39 +02:00
Alex Vong 005a08e3dc
gnu: Add ghc-fail. 
* gnu/packages/haskell.scm (ghc-fail): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:39 +02:00
Alex Vong 1eced2a7a8
gnu: Add ghc-edisoncore. 
* gnu/packages/haskell.scm (ghc-edisoncore): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:39 +02:00
Alex Vong 212ae09541
gnu: Add ghc-edisonapi. 
* gnu/packages/haskell.scm (ghc-edisonapi): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:39 +02:00
Alex Vong a623fd7fed
gnu: Add ghc-murmur-hash. 
* gnu/packages/haskell.scm (ghc-murmur-hash): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:38 +02:00
Alex Vong ca48a34594
gnu: Add ghc-data-hash. 
* gnu/packages/haskell.scm (ghc-data-hash): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 17:07:38 +02:00
Efraim Flashner adcb30642c
gnu: pspp: Update to 0.11.0. 
This fixes CVE-2017-10791, CVE-2017-10792.

* gnu/packages/statistics.scm (pspp): Update to 0.11.0.
 2017-08-16 17:57:40 +03:00
Alex Vong 96f23b62e0
gnu: Add ghc-equivalence. 
* gnu/packages/haskell.scm (ghc-equivalence): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:53:13 +02:00
Alex Vong 3f8b8e731c
gnu: Add ghc-boxes. 
* gnu/packages/haskell.scm (ghc-boxes): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:53:13 +02:00
Alex Vong be04f8020a
gnu: Add ghc-edit-distance. 
* gnu/packages/haskell.scm (ghc-edit-distance): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:53:13 +02:00
Alex Vong 867ed9776c
gnu: Add ghc-stmonadtrans. 
* gnu/packages/haskell.scm (ghc-stmonadtrans): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:53:12 +02:00
Alex Vong f99a57dc28
gnu: Add ghc-strict. 
* gnu/packages/haskell.scm (ghc-strict): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:53:12 +02:00
Alex Vong c12562e1e8
gnu: cpphs: Update to 1.20.8. 
* gnu/packages/haskell.scm (cpphs): Update to 1.20.8.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:53:08 +02:00
ng0 2f7966c8e2
gnu: font-google-noto: Use font-build-system. 
* gnu/packages/fonts.scm (font-google-noto)[build-system]: Use
font-build-system.
[source]: Use url-fetch/zipbomb.
[arguments]: Remove it.
[native-inputs]: Remove it.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-08-16 16:18:50 +02:00
Efraim Flashner d534f3a4d3
gnu: r-mzr: Fix building on aarch64 and armhf. 
* gnu/packages/bioinformatics.scm (r-mzr)[inputs]: Add boost.
 2017-08-16 12:36:25 +03:00
Efraim Flashner 953a12fa9b
gnu: hdf4: Fix building on aarch64. 
* gnu/packages/maths.scm (hdf4)[arguments]: Add a phase to improve
detection and support for aarch64-linux.
 2017-08-16 09:33:11 +03:00
Leo Famulari 8343d373d5
gnu: cgit: Don't build cgit's special 'git:src' input. 
This special version of Git is only used within the build process of
cgit. We don't need to build it otherwise, so the package is removed
with this commit.

* gnu/packages/version-control.scm (cgit)[inputs]: Replace the git@2.10
package with an origin reference of the source code.
(git@2.10): Remove variable.
 2017-08-15 17:59:22 -04:00
Danny Milosavljevic 2434f5cedf
gnu: Add dssi. 
* gnu/packages/music.scm (dssi): New variable.
 2017-08-15 20:58:03 +02:00
Oleg Pykhalov 425d66f7a7
gnu: Add emacs-highlight-symbol. 
* gnu/packages/emacs.scm (emacs-highlight-symbol): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-15 20:52:58 +02:00
ng0 be69176bbd
gnu: fish-guix: Use new download URL. 
* gnu/packages/shells.scm (fish-guix)[source]: Adjust the download URL.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-15 20:41:23 +02:00
Marius Bakke dca82aefbc
gnu: p11-kit: Update to 0.23.8. 
* gnu/packages/tls.scm (p11-kit): Update to 0.23.8.
 2017-08-15 20:38:02 +02:00
Leo Famulari 6550e5ad64
gnu: signify: Update to 22. 
* gnu/packages/crypto.scm (signify): Update to 22.
 2017-08-15 13:27:30 -04:00
Ben Woodcroft 06f31e50b1
gnu: diamond: Update to 0.9.10. 
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.10.
 2017-08-15 18:49:33 +10:00
Efraim Flashner 3837108e40
gnu: bcftools: Fix building on aarch64. 
* gnu/packages/patches/bcftools-regidx-unsigned-char.patch: New file.
* gnu/packages/bioinformatics.scm (bcftools)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-08-15 10:31:20 +03:00
Mark H Weaver 09ec5a0f0c
Merge branch 'master' into core-updates 2017-08-15 03:10:14 -04:00
Efraim Flashner 2d430f2923
Revert "gnu: pspp: Update to 0.11.0." 
This FTBFS on x86_64 and i686.

This reverts commit f4c808df5b.
 2017-08-15 10:03:40 +03:00
Tobias Geerinckx-Rice 14f366e58d
gnu: youtube-dl: Update to 2017.08.13. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.08.13.
 2017-08-15 01:42:49 +02:00
Marius Bakke f28fea1ca7
gnu: e2fsprogs: Update to 1.43.5. 
* gnu/packages/patches/e2fsprogs-32bit-quota-warnings.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/linux.scm (e2fsprogs): Update to 1.43.5.
[source]: Use patch.
 2017-08-15 01:08:01 +02:00
Leo Famulari 15428168ea
gnu: cvs: Fix CVE-2017-12836. 
* gnu/packages/patches/cvs-2017-12836.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/version-control.scm (cvs)[source]: Use it.
 2017-08-14 15:55:31 -04:00
Marius Bakke 36bfcf7e3a
gnu: git@2.10: Update to 2.10.4 [fixes CVE-2017-1000117]. 
...also disable tests, since they broke after c9f4f56b24.

* gnu/packages/version-control.scm (git@2.10): Update to 2.10.4.
[arguments]: New field.
 2017-08-14 21:44:24 +02:00
Efraim Flashner 2bccf1c0ec
gnu: gcc@7: Update to 7.2.0. 
* gnu/packages/gcc.scm (gcc@7): Update to 7.2.0.
[source]: Switch to xz compression.
 2017-08-14 22:30:07 +03:00
Marius Bakke a547a6d560
Revert "gnu: e2fsprogs: Update to 1.43.5." 
Fails to build on i686:
<https://lists.gnu.org/archive/html/guix-devel/2017-08/msg00118.html>

This reverts commit 3ddaa7922b.
 2017-08-14 21:22:12 +02:00
Kei Kebreau 1faf081b47
gnu: milkytracker: Update to 1.01.00. 
* gnu/packages/music.scm (milkytracker): Update to 1.01.00.
 2017-08-14 14:26:15 -04:00
Ricardo Wurmus 9634804890
gnu: Add bismark. 
* gnu/packages/bioinformatics.scm (bismark): New variable.
 2017-08-14 12:00:56 +02:00
Ricardo Wurmus 86763fdd70
gnu: Add r-dexseq. 
* gnu/packages/bioinformatics.scm (r-dexseq): New variable.
 2017-08-14 12:00:51 +02:00
Ricardo Wurmus 233f4f43bf
gnu: Add perl-math-random-secure. 
* gnu/packages/crypto.scm (perl-math-random-secure): New variable.
 2017-08-14 11:50:42 +02:00
Ricardo Wurmus 2023b79f59
gnu: Add perl-crypt-random-source. 
* gnu/packages/crypto.scm (perl-crypt-random-source): New variable.
 2017-08-14 11:50:13 +02:00
Ricardo Wurmus 2bdc07c2a5
gnu: Add perl-type-tiny. 
* gnu/packages/perl.scm (perl-type-tiny): New variable.
 2017-08-14 11:46:23 +02:00
Ricardo Wurmus a0eb3104a9
gnu: Add perl-ref-util-xs. 
* gnu/packages/perl.scm (perl-ref-util-xs): New variable.
 2017-08-14 11:46:14 +02:00
Ricardo Wurmus 44d37e43fe
gnu: Add perl-regexp-util. 
* gnu/packages/perl.scm (perl-regexp-util): New variable.
 2017-08-14 11:46:04 +02:00
Ricardo Wurmus 413dd21084
gnu: Add perl-type-tie. 
* gnu/packages/perl.scm (perl-type-tie): New variable.
 2017-08-14 11:45:56 +02:00
Ricardo Wurmus 649238cbc7
gnu: Add perl-math-random-isaac. 
* gnu/packages/crypto.scm (perl-math-random-isaac): New variable.
 2017-08-14 11:45:20 +02:00
Ricardo Wurmus d96e162aa9
gnu: Add perl-math-random-isaac-xs. 
* gnu/packages/crypto.scm (perl-math-random-isaac-xs): New variable.
 2017-08-14 11:44:15 +02:00
Ricardo Wurmus 2fa2179135
gnu: Add perl-hash-fieldhash. 
* gnu/packages/perl.scm (perl-hash-fieldhash): New variable.
 2017-08-14 11:37:08 +02:00
Arun Isaac 28fd275caf
gnu: arandr: Use absolute path for xrandr. 
* gnu/packages/xdisorg.scm (arandr)[arguments]: Add configure phase.
 2017-08-14 10:01:40 +02:00
Mark H Weaver 9031d26aeb
gnu: linux-libre: Update to 4.12.7. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.7.
(%linux-libre-hash): Update hash.
 2017-08-14 03:33:09 -04:00
Mark H Weaver e96b4378a2
gnu: linux-libre@4.9: Update to 4.9.43. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.43.
 2017-08-14 03:32:26 -04:00
Mark H Weaver 7aee6a311b
gnu: linux-libre@4.4: Update to 4.4.82. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.82.
 2017-08-14 03:31:29 -04:00
Andy Wingo 3bfa7af417
gnu: libreoffice: Install .desktop files. 
* gnu/packages/libreoffice.scm (libreoffice): Add phase to install .desktop
files to $out/share so that LibreOffice will show up in Gnome/KDE/etc and so
that it is associated with the various MIME types of interest.
 2017-08-14 09:11:22 +02:00
Kei Kebreau ac2ddcc66f
gnu: wxmaxima: Update to 17.05.1. 
* gnu/packages/maths.scm (wxmaxima): Update to 17.05.1.
[arguments]: Put "autoconf" phase after the "unpack" phase. Fix
indentation.
 2017-08-13 18:18:27 -04:00
ng0 be6e2c3018
gnu: Update open-adventure to d43854f0f6bb8e9eea7fbce80348150e7e7fc34d. 
* gnu/packages/games.scm (open-adventure): Update to
d43854f0f6bb8e9eea7fbce80348150e7e7fc34d.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-08-13 15:39:47 -04:00
ng0 05af41a181
gnu: linenoise: Update to commit 2105ce445821381cf1bca87b6d386d4ea88ee20d. 
* gnu/packages/shells.scm (linenoise): Update to commit
2105ce445821381cf1bca87b6d386d4ea88ee20d. Fix indentation.
[source]: change to git.

Signed-off-by: Kei Kebreau <kei@openmailbox.org>
 2017-08-13 15:29:45 -04:00
Alex Vong f152208b0d
gnu: qemu: Fix CVE-2017-{10664,10806,10911,11434}. 
* gnu/packages/patches/qemu-CVE-2017-10664.patch,
gnu/packages/patches/qemu-CVE-2017-10806.patch,
gnu/packages/patches/qemu-CVE-2017-10911.patch,
gnu/packages/patches/qemu-CVE-2017-11434.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/virtualization.scm (qemu)[source]: Use them.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-13 18:28:27 +02:00
Marius Bakke d5daf6fbe0
gnu: curl: Fix i686 test failure. 
* gnu/packages/patches/curl-bounds-check.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/curl.scm (curl-7.55.0)[source]: Use it.
 2017-08-13 16:46:41 +02:00
Marius Bakke 9766082045
gnu: imagemagick: Update to 6.9.9-7. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-7.
 2017-08-13 15:14:03 +02:00
Oleg Pykhalov f7e8302b4e
gnu: Add emacs-nix-mode. 
* gnu/packages/emacs.scm (emacs-nix-mode): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-13 13:20:30 +05:30
Efraim Flashner f4c808df5b
gnu: pspp: Update to 0.11.0. 
This fixes CVE-2017-10791, CVE-2017-10792.

* gnu/packages/statistics.scm (pspp): Update to 0.11.0.
 2017-08-13 10:16:17 +03:00
Christopher Baines c0761f2e7e
gnu: moreutils: Add more inputs to moreutils. 
The included ts command requires the Time::Duration and Date::Parse perl
modules for the -r option.

* gnu/packages/moreutils.scm (moreutils)[inputs]: Add perl-timedate and
  perl-time-duration.
  [arguments]: Wrap ts with PERL5LIB.
 2017-08-12 22:09:50 +01:00
Efraim Flashner 861fd04baf
gnu: efl: Don't include gtk+@3 in enclosure. 
* gnu/packages/enlightenment.scm (efl)[propagated-inputs]: Replace
libinput with libinput-minimal.
 2017-08-12 23:10:38 +03:00
Efraim Flashner 9be481f8b9
gnu: efl: Update to 1.20.2. 
* gnu/packages/enlightenment.scm (efl): Update to 1.20.2.
 2017-08-12 23:10:36 +03:00
Mark H Weaver f814379463
gnu: linux-libre: Update to 4.12.6. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.6.
(%linux-libre-hash): Update hash.
 2017-08-12 15:52:29 -04:00
Mark H Weaver 5a8fc7de66
gnu: linux-libre@4.9: Update to 4.9.42. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.42.
 2017-08-12 15:51:47 -04:00
Mark H Weaver 7d7c84a7bf
gnu: linux-libre@4.4: Update to 4.4.81. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.81.
 2017-08-12 15:51:00 -04:00
Danny Milosavljevic 462ae6f612
gnu: python-pylint: Use Python2 variant system. 
* gnu/packages/python.scm (python-pylint): Use Python2 variant system.
(python2-pylint): Strip Python2 variant system.
 2017-08-12 16:30:16 +02:00
Alex Vong bfcdf88760
gnu: catdoc: Fix CVE-2017-11110. 
* gnu/packages/patches/catdoc-CVE-2017-11110.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/textutils.scm (catdoc)[source]: Use it.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-08-12 15:30:23 +02:00
Marius Bakke 3ddaa7922b
gnu: e2fsprogs: Update to 1.43.5. 
* gnu/packages/linux.scm (e2fsprogs): Update to 1.43.5.
 2017-08-12 14:07:41 +02:00
Marius Bakke f1f2da6bce
gnu: feh: Update to 2.19.2. 
* gnu/packages/image-viewers.scm (feh): Update to 2.19.2.
 2017-08-12 13:59:14 +02:00
Tobias Geerinckx-Rice 3f09b46d93
gnu: dub: Update to 1.4.1. 
* gnu/packages/ldc.scm (dub): Update to 1.4.1.
 2017-08-11 16:46:00 +02:00
Andy Wingo f7fc9667b2
gnu: Add cloc. 
* gnu/packages/code.scm (cloc): New public variable.
 2017-08-11 10:38:30 +02:00
Mark H Weaver 3785e42e52
Merge branch 'master' into core-updates 2017-08-11 03:49:24 -04:00
Leo Famulari d373c16f33
gnu: imagemagick: Update to 6.9.9-5. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-5.
 2017-08-10 20:12:47 -04:00
Tobias Geerinckx-Rice 1c865bfce5
gnu: mksh: Update to 56. 
* gnu/packages/shells.scm (mksh): Update to 56.
 2017-08-11 01:02:12 +02:00
Tobias Geerinckx-Rice eec0c587af
gnu: ruby-debug-inspector: Update to 0.0.3. 
* gnu/packages/ruby.scm (ruby-debug-inspector): Update to 0.0.3.
 2017-08-11 00:21:00 +02:00
Tobias Geerinckx-Rice c3b36fa161
gnu: ruby-listen: Update to 3.1.5. 
* gnu/packages/ruby.scm (ruby-listen): Update to 3.1.5.
 2017-08-11 00:20:59 +02:00
Tobias Geerinckx-Rice 98ff58a53d
gnu: ruby-introspection: Update to 0.0.4. 
* gnu/packages/ruby.scm (ruby-introspection): Update to 0.0.4.
 2017-08-11 00:20:59 +02:00
Tobias Geerinckx-Rice a88f24d860
gnu: ruby-simplecov-html: Update to 0.10.1. 
* gnu/packages/ruby.scm (ruby-simplecov-html): Update to 0.10.1.
 2017-08-11 00:20:58 +02:00
Tobias Geerinckx-Rice ba074a85d0
gnu: ruby-net-http-digest-auth: Update to 1.4.1. 
* gnu/packages/ruby.scm (ruby-net-http-digest-auth): Update to 1.4.1.
 2017-08-11 00:20:57 +02:00
Tobias Geerinckx-Rice 12313cd071
gnu: ruby-nenv: Update to 0.3.0. 
* gnu/packages/ruby.scm (ruby-nenv): Update to 0.3.0.
 2017-08-11 00:20:57 +02:00
Tobias Geerinckx-Rice aeb4e61e75
gnu: ruby-rjb: Update to 1.5.5. 
* gnu/packages/ruby.scm (ruby-rjb): Update to 1.5.5.
 2017-08-11 00:20:56 +02:00
Tobias Geerinckx-Rice acbc506218
gnu: ruby-libxml: Update to 3.0.0. 
* gnu/packages/ruby.scm (ruby-libxml): Update to 3.0.0.
 2017-08-11 00:20:55 +02:00
Tobias Geerinckx-Rice 6f9652b0a1
gnu: ruby-minitest-bacon: Update to 1.0.3. 
* gnu/packages/ruby.scm (ruby-minitest-bacon): Update to 1.0.3.
 2017-08-11 00:20:55 +02:00
Tobias Geerinckx-Rice fbefd6ffbf
gnu: ruby-tins: Update to 1.15.0. 
* gnu/packages/ruby.scm (ruby-tins): Update to 1.15.0.
 2017-08-11 00:20:54 +02:00
Tobias Geerinckx-Rice ceaff59ec7
gnu: ruby-git: Update to 1.3.0. 
* gnu/packages/ruby.scm (ruby-git): Update to 1.3.0.
 2017-08-11 00:20:53 +02:00
Tobias Geerinckx-Rice c9e261b7eb
gnu: ruby-minitest-bonus-assertions: Update to 3.0. 
* gnu/packages/ruby.scm (ruby-minitest-bonus-assertions): Update to 3.0.
 2017-08-11 00:20:52 +02:00
Tobias Geerinckx-Rice d21c6686d0
gnu: ruby-minitest-hooks: Update to 1.4.1. 
* gnu/packages/ruby.scm (ruby-minitest-hooks): Update to 1.4.1.
 2017-08-11 00:20:52 +02:00
Tobias Geerinckx-Rice d74d96e466
gnu: ruby-test-unit: Update to 3.2.5. 
* gnu/packages/ruby.scm (ruby-test-unit): Update to 3.2.5.
 2017-08-11 00:20:51 +02:00
Tobias Geerinckx-Rice 2e8cd8624d
gnu: ruby-thor: Update to 0.19.4. 
* gnu/packages/ruby.scm (ruby-thor): Update to 0.19.4.
 2017-08-11 00:20:50 +02:00
Tobias Geerinckx-Rice 1d60c436aa
gnu: ruby-packnga: Update to 1.0.4. 
* gnu/packages/ruby.scm (ruby-packnga): Update to 1.0.4.
 2017-08-11 00:20:50 +02:00
Tobias Geerinckx-Rice e32dfb7405
gnu: ruby-lumberjack: Update to 1.0.12. 
* gnu/packages/ruby.scm (ruby-lumberjack): Update to 1.0.12.
 2017-08-11 00:20:49 +02:00
Tobias Geerinckx-Rice 185ea4465d
gnu: ruby-net-http-persistent: Update to 3.0.0. 
* gnu/packages/ruby.scm (ruby-net-http-persistent): Update to 3.0.0.
 2017-08-11 00:20:48 +02:00
Tobias Geerinckx-Rice 04de0cb5a0
gnu: ruby-mail: Update to 2.6.6. 
* gnu/packages/ruby.scm (ruby-mail): Update to 2.6.6.
 2017-08-11 00:20:48 +02:00
Tobias Geerinckx-Rice 263c0dbf00
gnu: ruby-ox: Update to 2.6.0. 
* gnu/packages/ruby.scm (ruby-ox): Update to 2.6.0.
 2017-08-11 00:20:47 +02:00
Tobias Geerinckx-Rice 2a91494ed1
gnu: ruby-redcloth: Update to 4.3.2. 
* gnu/packages/ruby.scm (ruby-redcloth): Update to 4.3.2.
 2017-08-11 00:20:46 +02:00
Tobias Geerinckx-Rice a3179a7338
gnu: ruby-connection-pool: Update to 2.2.1. 
* gnu/packages/ruby.scm (ruby-connection-pool): Update to 2.2.1.
 2017-08-11 00:20:46 +02:00
Tobias Geerinckx-Rice 56822223c1
gnu: ruby-fivemat: Update to 1.3.5. 
* gnu/packages/ruby.scm (ruby-fivemat): Update to 1.3.5.
 2017-08-11 00:20:45 +02:00
Tobias Geerinckx-Rice 8d10918a43
gnu: ruby-daemons: Update to 1.2.4. 
* gnu/packages/ruby.scm (ruby-daemons): Update to 1.2.4.
 2017-08-11 00:20:44 +02:00
Tobias Geerinckx-Rice e2fcef3913
gnu: ruby-diff-lcs: Update to 1.3. 
* gnu/packages/ruby.scm (ruby-diff-lcs): Update to 1.3.
 2017-08-11 00:20:44 +02:00
Tobias Geerinckx-Rice 313dd5ddc0
gnu: ruby-thread-safe: Update to 0.3.6. 
* gnu/packages/ruby.scm (ruby-thread-safe): Update to 0.3.6.
 2017-08-11 00:20:43 +02:00
Tobias Geerinckx-Rice 884a80dd0a
gnu: ruby-pkg-config: Update to 1.2.5. 
* gnu/packages/ruby.scm (ruby-pkg-config): Update to 1.2.5.
 2017-08-11 00:20:43 +02:00
Tobias Geerinckx-Rice 30caad5080
gnu: ruby-eventmachine: Update to 1.2.5. 
* gnu/packages/ruby.scm (ruby-eventmachine): Update to 1.2.5.
 2017-08-11 00:20:42 +02:00
Tobias Geerinckx-Rice f3a6311af4
gnu: ruby-term-ansicolor: Update to 1.6.0. 
* gnu/packages/ruby.scm (ruby-term-ansicolor): Update to 1.6.0.
 2017-08-11 00:20:41 +02:00
Tobias Geerinckx-Rice 0cd7b8164d
gnu: ruby-rake-compiler: Update to 1.0.4. 
* gnu/packages/ruby.scm (ruby-rake-compiler): Update to 1.0.4.
 2017-08-11 00:20:40 +02:00
Tobias Geerinckx-Rice 3b0e45c86d
gnu: ruby-useragent: Update to 0.16.8. 
* gnu/packages/ruby.scm (ruby-useragent): Update to 0.16.8.
 2017-08-11 00:20:40 +02:00
Tobias Geerinckx-Rice 5620bd456f
gnu: ruby-domain-name: Update to 0.5.20170404. 
* gnu/packages/ruby.scm (ruby-domain-name): Update to 0.5.20170404.
 2017-08-11 00:20:39 +02:00
Tobias Geerinckx-Rice a7ca218cd5
gnu: ruby-notiffany: Update to 0.1.1. 
* gnu/packages/ruby.scm (ruby-notiffany): Update to 0.1.1.
 2017-08-11 00:20:39 +02:00
Tobias Geerinckx-Rice d5489a618d
gnu: ruby-byebug: Update to 9.0.6. 
* gnu/packages/ruby.scm (ruby-byebug): Update to 9.0.6.
 2017-08-11 00:20:38 +02:00
Tobias Geerinckx-Rice 65a7f09ce0
gnu: ruby-sequel: Update to 4.49.0. 
* gnu/packages/ruby.scm (ruby-sequel): Update to 4.49.0.
 2017-08-11 00:20:38 +02:00
Tobias Geerinckx-Rice d1c1f36803
gnu: ruby-shoulda-matchers: Update to 3.1.2. 
* gnu/packages/ruby.scm (ruby-shoulda-matchers): Update to 3.1.2.
 2017-08-11 00:20:37 +02:00
Tobias Geerinckx-Rice 8e5ff25042
gnu: ruby-arel: Update to 8.0.0. 
* gnu/packages/ruby.scm (ruby-arel): Update to 8.0.0.
 2017-08-11 00:20:37 +02:00
Tobias Geerinckx-Rice 56ccada3c1
gnu: ruby-rb-fsevent: Update to 0.10.2. 
* gnu/packages/ruby.scm (ruby-rb-fsevent): Update to 0.10.2.
 2017-08-11 00:20:36 +02:00
Tobias Geerinckx-Rice cd698b6e20
gnu: ruby-utils: Update to 0.9.0. 
* gnu/packages/ruby.scm (ruby-utils): Update to 0.9.0.
 2017-08-11 00:20:35 +02:00
Tobias Geerinckx-Rice e322222ab4
gnu: ruby-tzinfo: Update to 1.2.3. 
* gnu/packages/ruby.scm (ruby-tzinfo): Update to 1.2.3.
 2017-08-11 00:20:35 +02:00
Tobias Geerinckx-Rice 32bbfea811
gnu: ruby-rb-inotify: Update to 0.9.10. 
* gnu/packages/ruby.scm (ruby-rb-inotify): Update to 0.9.10.
 2017-08-11 00:20:34 +02:00
Tobias Geerinckx-Rice 8929f0a481
gnu: ruby-gherkin: Update to 4.1.3. 
* gnu/packages/ruby.scm (ruby-gherkin): Update to 4.1.3.
 2017-08-11 00:20:33 +02:00
Tobias Geerinckx-Rice 3d4a5eb555
gnu: ruby-timecop: Update to 0.9.1. 
* gnu/packages/ruby.scm (ruby-timecop): Update to 0.9.1.
 2017-08-11 00:20:33 +02:00
Tobias Geerinckx-Rice 483846ac6f
gnu: ruby-minitest: Update to 5.10.3. 
* gnu/packages/ruby.scm (ruby-minitest): Update to 5.10.3.
 2017-08-11 00:20:32 +02:00
Tobias Geerinckx-Rice 5ca48923f5
gnu: ruby-redcarpet: Update to 3.4.0. 
* gnu/packages/ruby.scm (ruby-redcarpet): Update to 3.4.0.
 2017-08-11 00:20:32 +02:00
Tobias Geerinckx-Rice dc97df2ef4
gnu: ruby-cucumber-core: Update to 2.0.0. 
* gnu/packages/ruby.scm (ruby-cucumber-core): Update to 2.0.0.
 2017-08-11 00:20:31 +02:00
Tobias Geerinckx-Rice ce5f523001
gnu: ruby-pg: Update to 0.21.0. 
* gnu/packages/ruby.scm (ruby-pg): Update to 0.21.0.
 2017-08-11 00:20:30 +02:00
Tobias Geerinckx-Rice d14e5eaa19
gnu: ruby-slop: Update to 4.5.0. 
* gnu/packages/ruby.scm (ruby-slop): Update to 4.5.0.
 2017-08-11 00:20:29 +02:00
Marius Bakke c2f93e9c07
gnu: openjpeg: Update to 2.2.0 [security fixes]. 
In addition to the patches we already had (which are not mentioned in the
ChangeLog, but verified by following their respective GitHub issues) this
release also fixes CVE-2016-9112, CVE-2016-5139, CVE-2016-5152, CVE-2016-5158,
CVE-2016-5159, CVE-2016-1626 and CVE-2016-1628.

See <https://github.com/uclouvain/openjpeg/blob/v2.2.0/CHANGELOG.md> for details.

* gnu/packages/patches/openjpeg-CVE-2016-9572-CVE-2016-9573.patch,
  gnu/packages/patches/openjpeg-CVE-2016-9850-CVE-2016-9851.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/image.scm (openjpeg): Update to 2.2.0.
[source](patches): Remove.
* gnu/packages/gstreamer.scm (gst-plugins-bad)[arguments]: Add phase to patch
hard-coded openjpeg-2.1 path.
 2017-08-10 22:23:31 +02:00
Marius Bakke 1a1558e88f
gnu: postgresql: Update to 9.6.4 [fixes CVE-2017-{7546,7547,7548}]. 
See <https://www.postgresql.org/about/news/1772/> for more information.

* gnu/packages/databases.scm (postgresql): Update to 9.6.4.
 2017-08-10 22:23:31 +02:00
Leo Famulari 1e07daa27a
gnu: mercurial: Update to 4.2.3 [fixes CVE-2017-1000116]. 
* gnu/packages/version-control.scm (mercurial): Update to 4.2.3.
 2017-08-10 15:02:04 -04:00
Leo Famulari 38f8a882ab
gnu: git: Update to 2.14.1 [fixes CVE-2017-1000117]. 
* gnu/packages/version-control.scm (git): Update to 2.14.1.
 2017-08-10 15:02:04 -04:00
Leo Famulari 5993f7c455
gnu: subversion: Update to 1.8.19 [fixes CVE-2017-9800]. 
* gnu/packages/version-control.scm (subversion): Update to 1.8.19.
[source]: Add alternate URL.
 2017-08-10 15:02:04 -04:00
Oleg Pykhalov f262f44683
gnu: Add emacs-engine-mode. 
* gnu/packages/emacs.scm (emacs-engine-mode): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-10 22:25:25 +05:30
Leo Famulari 783daa4982
gnu: libsoup: Update to 2.58.2 (fixes CVE-2017-2885). 
* gnu/packages/gnome.scm (libsoup): Update to 2.58.2.
 2017-08-10 12:25:31 -04:00
Tobias Geerinckx-Rice ddde3f6be1
gnu: catimg: Update to 2.4.0. 
* gnu/packages/image-viewers.scm (catimg): Update to 2.4.0.
 2017-08-10 17:26:08 +02:00
Tobias Geerinckx-Rice 226685faa5
gnu: cppcheck: Update to 1.80. 
* gnu/packages/check.scm (cppcheck): Update to 1.80.
 2017-08-10 17:26:07 +02:00
Tobias Geerinckx-Rice c63b83a40f
gnu: vdirsyncer: Update to 0.16.1. 
* gnu/packages/dav.scm (vdirsyncer): Update to 0.16.1.
 2017-08-10 17:26:07 +02:00
Ben Woodcroft 37b08547e4
gnu: ruby-bio-commandeer: Update to 0.4.0. 
* gnu/packages/ruby.scm (ruby-bio-commandeer): Update to 0.4.0.
 2017-08-10 22:20:38 +10:00
Oleg Pykhalov 27feda65e7
gnu: Add emacs-erc-hl-nicks. 
* gnu/packages/emacs.scm (emacs-erc-hl-nicks): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-10 14:55:09 +05:30
Oleg Pykhalov 1ee879e967
gnu: Add emacs-gitpatch. 
By the way, “gitpatch.el” says different version than release tarball.
Do I need to ask a developer?
--8<---------------cut here---------------start------------->8---
;; Author: Feng Shu <tumashu@163.com>
;; Homepage: https://github.com/tumashu/gitpatch
;; Keywords: convenience
;; Package-Requires: ((emacs "24.3"))
;; Version: 0.10
--8<---------------cut here---------------end--------------->8---

>From 9eddf07fa401468738c2f48a25e51ddef2a3ceed Mon Sep 17 00:00:00 2001
From: Oleg Pykhalov <go.wigust@gmail.com>
Date: Sat, 29 Jul 2017 14:22:48 +0300
Subject: [PATCH] gnu: Add emacs-gitpatch.

* gnu/packages/emacs.scm (emacs-gitpatch): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-10 14:37:17 +05:30
Oleg Pykhalov a88adeb343
gnu: Add emacs-git-messenger. 
gnu/packages/emacs.scm (emacs-git-messenger): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-10 13:27:05 +05:30
Christopher Baines 761f5865c8
gnu: Update tailon to version 1.3.0. 
From version 1.1.1.

* gnu/packages/logging.scm (tailon)[version]: Change to 1.3.0.
  [inputs]: Add python-tornado-http-auth.
 2017-08-09 23:50:23 +01:00
Christopher Baines c795bc79d9
gnu: Add python-tornado-http-auth. 
* gnu/packages/python.scm (python-tornado-http-auth): New variable.
 2017-08-09 23:50:10 +01:00
Marius Bakke d156c999d0
Merge branch 'master' into core-updates 2017-08-10 00:18:36 +02:00
Marius Bakke 4c6c683862
gnu: nmap: Update to 7.60. 
* gnu/packages/admin.scm (nmap): Update to 7.60.
 2017-08-10 00:15:35 +02:00
Marius Bakke 79d9525071
gnu: curl: Update replacement to 7.55.0. [security fixes] 
Fixes CVE-2017-1000099, CVE-2017-1000100, and CVE-2017-100101.
See <https://curl.haxx.se/docs/security.html> for details.

* gnu/packages/curl.scm (curl)[replacement]: Update to 7.55.0.
(curl-7.54.1): Rename to ...
(curl-7.55.0): ... this.
[source]: Update source URI to match upstream compression method change.
[arguments]: Add 'fix-Makefile' phase.
 2017-08-10 00:15:35 +02:00
Marius Bakke 2e8c61fcf0
gnu: samba: Update to 4.6.7. 
* gnu/packages/samba.scm (samba): Update to 4.6.7.
 2017-08-10 00:15:34 +02:00
Mark H Weaver cc294bcee6
Merge branch 'master' into core-updates 2017-08-09 17:25:31 -04:00
Leo Famulari ae7f246cf1
gnu: python-nbformat: Update to 4.3.0. 
* gnu/packages/python.scm (python-nbformat, python2-nbformat): Update to 4.3.0.
 2017-08-09 16:52:51 -04:00
Leo Famulari 10756b9ed1
gnu: gnupg: Update to 2.1.23. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.23.
[arguments]: Remove 'enable-gpg2-is-gpg' from #:configure-flags, since it is now
the default.
 2017-08-09 16:01:33 -04:00
Ricardo Wurmus 1b22ecdac4
gnu: r-wgcna: Update to 1.61. 
* gnu/packages/bioinformatics.scm (r-wgcna): Update to 1.61.
[propagated-inputs]: Add r-rcpp, r-robust, r-survival.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus c5f744a68d
gnu: Add r-robust. 
* gnu/packages/statistics.scm (r-robust): New variable.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus 5d0afe8849
gnu: Add r-fit-models. 
* gnu/packages/statistics.scm (r-fit-models): New variable.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus 0bae5fd6a7
gnu: Add r-rrcov. 
* gnu/packages/statistics.scm (r-rrcov): New variable.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus 23841b2573
gnu: Add r-pcapp. 
* gnu/packages/statistics.scm (r-pcapp): New variable.
 2017-08-09 20:08:13 +02:00
Ricardo Wurmus 0ecd065839
gnu: r-gdtools: Update to 0.1.5. 
* gnu/packages/statistics.scm (r-gdtools): Update to 0.1.5.
 2017-08-09 20:08:12 +02:00
Ricardo Wurmus c3317cd9fb
gnu: r-ggbeeswarm: Update to 0.6.0. 
* gnu/packages/statistics.scm (r-ggbeeswarm): Update to 0.6.0.
 2017-08-09 20:08:12 +02:00
Mark H Weaver ea0277abcd
gnu: icecat: Add more fixes from upstream mozilla-esr52. 
* gnu/packages/gnuzilla.scm (icecat)[source]: Add fixes for CVE-2017-7802,
CVE-2017-7803, CVE-2017-7807, and the remaining 6 out of 23 changesets for
CVE-2017-7779.
 2017-08-09 13:16:52 -04:00
Mark H Weaver 12025fb9b0
gnu: icecat: Rename patches to reflect CVE assignments. 
Document that our existing patches include fixes for CVE-2017-7753,
CVE-2017-7784, CVE-2017-7786, CVE-2017-7787, CVE-2017-7791, CVE-2017-7792,
CVE-2017-7798, CVE-2017-7798, CVE-2017-7800, CVE-2017-7801, and 17 out of 23
changesets for CVE-2017-7779.

* gnu/packages/gnuzilla.scm (icecat)[source]: Rename patches to reflect CVE
assignments.
 2017-08-09 13:16:43 -04:00
ng0 28e12d6c81
gnu: gnurl: Update to 7.55.0. 
* gnu/packages/gnunet.scm (gnurl): Update to 7.55.0.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
 2017-08-09 18:16:51 +02:00
Tobias Geerinckx-Rice a4afc536f9
gnu: virt-manager: Update to 1.4.2. 
* gnu/packages/virtualization.scm (virt-manager): Update to 1.4.2.
 2017-08-09 16:45:32 +02:00
Tobias Geerinckx-Rice 448052b713
gnu: libgdata: Disable failing tests. 
* gnu/packages/gnome.scm (libgdata)[arguments]: Add ‘disable-failing-tests’
phase.
 2017-08-09 16:31:06 +02:00
Ricardo Wurmus 18f5d2a70a
gnu: Add reference to (gnu packages graph). 
This is a follow-up to 1738138cb3.
 2017-08-09 15:43:35 +02:00
Ricardo Wurmus 1738138cb3
gnu: r-igraph: Move to (gnu packages graph). 
* gnu/packages/statistics.scm (r-igraph): Move from here...
* gnu/packages/graph.scm (r-igraph): ...to here.
 2017-08-09 14:47:47 +02:00
Ricardo Wurmus 31476df32e
gnu: Add python-igraph. 
* gnu/packages/graph.scm (python-igraph): New variable.
 2017-08-09 14:47:47 +02:00
Ricardo Wurmus e57fffad90
gnu: Add igraph. 
* gnu/packages/graph.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2017-08-09 14:47:47 +02:00
Efraim Flashner ea77385c4c
gnu: viewnior: Don't build icon-theme.cache. 
* gnu/packages/image-viewers.scm (viewnior)[arguments]: Add phase to
disable building the icon-theme.cache.
 2017-08-09 14:09:43 +03:00
Manolis Ragkousis 2d5bf32b8a
gnu: googletest: Build shared libraries. 
* gnu/packages/check.scm (googletest)[arguments]: Pass "-DBUILD_SHARED_LIBS=ON"
  in #:configure-flags.
 2017-08-09 13:53:29 +03:00
Manolis Ragkousis c608fe8cf3
gnu: Add ois. 
* gnu/packages/game-development.scm (ois): New variable.
 2017-08-09 13:53:16 +03:00
Eric Bavier d84b09e937
gnu: dealii: Update to 8.5.0. 
* gnu/packages/maths.scm (dealii): Update to 8.5.0.
[arguments]: Delete 'hint-example-prefix phase, which would need adjusting for
this version.  Users can use e.g. 'export DEAL_II_DIR=$GUIX_ENVIRONMENT'.
Adjust configuration flags.
 2017-08-09 01:56:53 -05:00
Eric Bavier 05cca6ce90
gnu: stress-make: Patch default shell. 
* gnu/packages/debug.scm (stress-make)[arguments]: Add 'set-default-shell
phase.
 2017-08-09 01:56:53 -05:00
Eric Bavier bd5b5ac0c5
gnu: suitesparse: Update to 4.5.5. 
* gnu/packages/maths.scm (suitesparse): Update to 4.5.5.
[source]: Add 'modules' and 'snippet' field to remove bundled source.
[arguments]: Remove 'prepare-out' phase.  Adjust #:make-flags for metis.
Make build parallel, since it now appears to be safe.
[inputs]: Add metis.
 2017-08-09 01:56:53 -05:00
Eric Bavier 2509522c4f
gnu: suitesparse: Use modify-phases. 
* gnu/packages/maths.scm (suitesparse)[arguments]: Use modify-phases.
 2017-08-09 01:56:53 -05:00
Eric Bavier 9731c412e9
gnu: petsc, slepc: Use 'parallel-job-count'. 
* gnu/packages/maths.scm (petsc, slepc)[arguments]: Set #:make-flags to
override default unlimited '-j'.
(petsc)[arguments]: Scrub build machine cores from installed files in
'clean-local-references' phase.
 2017-08-09 01:56:53 -05:00
Eric Bavier baeaf8821d
gnu: slepc: Update to 3.7.4. 
* gnu/packages/maths.scm (slepc): Update to 3.7.4.
[source]: Use direct source link.  Remove 'file-name' field.
 2017-08-09 01:56:52 -05:00
Eric Bavier 41a46a5035
gnu: petsc: Update to 3.7.6. 
* gnu/packages/maths.scm (petsc): Update to 3.7.6.
 2017-08-09 01:56:46 -05:00
Tobias Geerinckx-Rice 026051953d
gnu: epiphany: Update to 3.24.3. 
* gnu/packages/gnome.scm (epiphany): Update to 3.24.3.
 2017-08-09 07:20:57 +02:00
Tobias Geerinckx-Rice c762011e40
gnu: tracker: Update to 1.12.2. 
* gnu/packages/gnome.scm (tracker): Update to 1.12.2.
 2017-08-09 07:20:56 +02:00
Tobias Geerinckx-Rice 666901b298
gnu: gnome-online-accounts: Update to 3.24.2. 
* gnu/packages/gnome.scm (gnome-online-accounts): Update to 3.24.2.
 2017-08-09 07:20:56 +02:00
Tobias Geerinckx-Rice a51fc34c28
gnu: mutter: Update to 3.24.4. 
* gnu/packages/gnome.scm (mutter): Update to 3.24.4.
 2017-08-09 07:20:55 +02:00
Tobias Geerinckx-Rice 0d2df50caf
gnu: gedit: Support gspell. 
* gnu/packages/gnome.scm (gedit)[arguments]: Remove #:configure-flags.
[inputs]: Add gspell.
 2017-08-09 07:20:55 +02:00
Tobias Geerinckx-Rice e3705bb6ea
gnu: gedit: Update to 3.22.1. 
* gnu/packages/gnome.scm (gedit): Update to 3.22.1.
 2017-08-09 07:20:54 +02:00
Tobias Geerinckx-Rice eccd35be3d
gnu: gspell: Propagate enchant dependency. 
* gnu/packages/gnome.scm (gspell)[inputs]: Move enchant from here...
[propagated-inputs]: ...to here.
 2017-08-09 07:20:09 +02:00
Tobias Geerinckx-Rice a801ae4cae
gnu: gspell: Order inputs alphabetically. 
* gnu/packages/gnome.scm (gspell)[inputs, native-inputs]: Re-order.
 2017-08-09 07:20:09 +02:00
Tobias Geerinckx-Rice 9099bedfea
gnu: gnumeric: Update to 1.12.35. 
* gnu/packages/gnome.scm (gnumeric): Update to 1.12.35.
 2017-08-09 07:20:08 +02:00
Tobias Geerinckx-Rice e2bf423ab4
gnu: brasero: Update to 3.12.2. 
* gnu/packages/gnome.scm (brasero): Update to 3.12.2.
 2017-08-09 07:20:08 +02:00
Tobias Geerinckx-Rice f032d0be9c
gnu: Use HTTPS for gnome.org and subdomains. 
* gnu/packages/fonts.scm (font-bitstream-vera)[home-page]: Use HTTPS.
* gnu/packages/glib.scm (glib)[home-page]: Likewise.
* gnu/packages/gnome.scm (gcr, libgnome-keyring, gnome-keyring, evince)
(gnome-icon-theme, libgsf, gnome-mime-data, vala, vte, python2-rsvg)
(glib-networking, gnome-settings-daemon, libchamplain, grilo, grilo-plugins)
(gjs, zenity, mutter, network-manager, network-manager-applet, gdm)
[home-page]: Likewise.
* gnu/packages/gtk.scm (gtk-engines, murrine)[home-page]: Likewise.
 2017-08-09 00:49:41 +02:00
Christopher Baines 9bb47d7df8
gnu: 0ad: Update to 0.0.22-alpha. 
* gnu/packages/games.scm (0ad-data, 0ad): Update to 0.0.22-alpha.
 2017-08-08 21:24:01 +01:00
Efraim Flashner 65831c6425
gnu: babl: Update to 0.1.28. 
* gnu/packages/gimp.scm (babl): Update to 0.1.28.
 2017-08-08 18:43:07 +03:00
Efraim Flashner 3616ff51b3
gnu: gegl: Use 'modify-phases' syntax. 
* gnu/packages/gimp.scm (gegl)[arguments]: Use the 'modify-phases' syntax.
 2017-08-08 18:43:05 +03:00
Efraim Flashner b0a21b56db
gnu: gegl: Fix building on aarch64. 
* gnu/packages/gimp.scm (gegl)[arguments]: Add '-lm' configure-flag.
 2017-08-08 18:43:03 +03:00
Ben Woodcroft cc36165efa
gnu: ruby-activesupport: Update to 5.1.3. 
* gnu/packages/ruby.scm (ruby-activesupport): Update to 5.1.3.
 2017-08-08 21:54:20 +10:00
Tobias Geerinckx-Rice b998781d24
gnu: pciutils: Update to 3.5.5. 
* gnu/packages/pciutils.scm (pciutils): Update to 3.5.5.
 2017-08-08 05:23:38 +02:00
Tobias Geerinckx-Rice a40af5d0ad
gnu: hunspell: Update to 1.6.1. 
* gnu/packages/libreoffice.scm (hunspell): Update to 1.6.1.
[native-inputs]: Add autoconf, automake, and libtool.
[arguments]: Add ‘bootstrap’ phase.
 2017-08-08 05:23:37 +02:00
Tobias Geerinckx-Rice fc3560fff1
gnu: hunspell: Update home page. 
* gnu/packages/libreoffice.scm (hunspell)[home-page]: Update it.
 2017-08-08 05:23:37 +02:00
Tobias Geerinckx-Rice 625761a502
gnu: aspell-dict-en: Update to 2017.01.22-0. 
Add missing copyright line for 2016.

* gnu/packages/aspell.scm (aspell-dict-en): Update to 2017.01.22-0.
 2017-08-08 05:23:37 +02:00
Tobias Geerinckx-Rice d459524713
gnu: moreutils: Update to 0.61. 
* gnu/packages/moreutils.scm (moreutils): Update to 0.61.
 2017-08-08 05:23:36 +02:00
Tobias Geerinckx-Rice 7fae2063f8
gnu: sudo: Use ‘modify-phases’ syntax. 
* gnu/packages/admin.scm (sudo)[arguments]: Use ‘modify-phases’.
 2017-08-08 05:23:36 +02:00
Mark H Weaver 4f4134c26d
gnu: linux-libre: Update to 4.12.5. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.5.
(%linux-libre-hash): Update hash.
 2017-08-07 21:33:03 -04:00
Mark H Weaver 99ccc74725
gnu: linux-libre@4.9: Update to 4.9.41. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.41.
 2017-08-07 21:32:13 -04:00
Mark H Weaver c56b08b1e5
gnu: linux-libre@4.4: Update to 4.4.80. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.80.
 2017-08-07 21:31:36 -04:00
Mark H Weaver c36e27d504
gnu: linux-libre@4.1: Update to 4.1.43. 
* gnu/packages/linux.scm (linux-libre-4.1): Update to 4.1.43.
 2017-08-07 21:30:47 -04:00
Ben Woodcroft 63755fcd65
gnu: ruby-puma: Update to 3.9.1. 
* gnu/packages/ruby.scm (ruby-puma): Update to 3.9.1.
[source]: Remove patch.
[arguments]: Disable tests.
[native-inputs]: Remove field.
* gnu/packages/patches/ruby-puma-ignore-broken-test.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-08 09:31:18 +10:00
Ben Woodcroft 5b0c223ae3
gnu: ruby-nokogiri-diff: Update to 0.2.0-1.a38491e4. 
* gnu/packages/ruby.scm (ruby-nokogiri-diff): Update to 0.2.0-1.a38491e4.
 2017-08-08 09:30:44 +10:00
Ben Woodcroft 5071f17b29
gnu: ruby-tdiff: Update to 0.3.3-1.b662a604. 
* gnu/packages/ruby.scm: Update to 0.3.3-1.b662a604
 2017-08-08 09:30:40 +10:00
Ben Woodcroft e7ea30d59a
ruby: Replace with ruby-2.4.1. 
* gnu/packages/ruby.scm (ruby-2.4.1): New variable.
(ruby)[replacement]: New field.
 2017-08-08 09:30:02 +10:00
Mark H Weaver 2d9495da23
Merge branch 'master' into core-updates 2017-08-07 16:45:16 -04:00
Efraim Flashner 57e96e48b1
gnu: propeller-gcc-4: Don't build on aarch64-linux. 
* gnu/packages/embedded.scm (propeller-gcc-4)[supported-system]: New field.
 2017-08-07 17:02:24 +03:00
Efraim Flashner 6eed26443f
gnu: nim: Update to 0.17.0. 
* gnu/packages/nim.scm (nim): Update to 0.17.0.
[source, home-page]: Use https.
[arguments]: Patch more shebangs, use custom build phase.
 2017-08-07 13:37:28 +03:00
Leo Famulari c97fbf55e7
gnu: texlive: Remove texlive-minimal. 
This package is superseded by the modular TeX Live distribution.

* gnu/packages/tex.scm (texlive-minimal, texlive-texmf-minimal): Remove
variables.
 2017-08-07 12:29:20 +02:00
Leo Famulari 1335167a3b
gnu: biber: Update to 2.7. 
* gnu/packages/tex.scm (biber)[name]: Rename to 'biber'.
(biber-2.5): Remove variable.
 2017-08-07 12:08:58 +02:00
Leo Famulari 149f668821
gnu: texlive: Update to 2017. 
* gnu/packages/tex.scm (texlive, texlive-texmf): Update to 2017.
(texlive-texmf-src): Update to 20170524. Remove
'texlive-texmf-CVE-2016-10243.patch'.
(texlive-bin, texlive-extra-src): Update to 20170524.
* gnu/packages/patches/texlive-texmf-CVE-2016-10243.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-07 12:08:03 +02:00
Marius Bakke 83fef82b7c
gnu: cubicle: Fix evaluation. 
* gnu/packages/maths.scm (cubicle)[native-inputs]: Retrieve WHICH from
(gnu packages base).
 2017-08-07 12:02:33 +02:00
Efraim Flashner cda20ee816
gnu: vapoursynth: Don't build on aarch64-linux. 
* gnu/packages/video.scm (vapoursynth)[supported-systems]: Remove
aarch64-linux from the supported-systems.
 2017-08-07 07:24:17 +03:00
Tobias Geerinckx-Rice 74033bbcc3
gnu: youtube-dl: Update to 2017.08.06. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.08.06.
 2017-08-07 05:28:34 +02:00
Tobias Geerinckx-Rice d8af4f6dde
gnu: ntfs-3g: Update to 2017.3.23. 
* gnu/packages/linux.scm (ntfs-3g): Update to 2017.3.23.
[source]: Remove patch.
* gnu/packages/patches/ntfs-3g-CVE-2017-0358.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-07 02:01:34 +02:00
Tobias Geerinckx-Rice 8bad0c0bbb
gnu: ntfs-3g: Use HTTPS for the home page as well. 
* gnu/packages/linux.scm (ntfs-3g)[home-page]: Use HTTPS.
 2017-08-07 02:01:33 +02:00
Tobias Geerinckx-Rice ea94aff7da
gnu: wimlib: Update to 1.12.0. 
* gnu/packages/backup.scm (wimlib): Update to 1.12.0.
 2017-08-07 02:01:32 +02:00
Tobias Geerinckx-Rice 9d217d277e
gnu: r-bsgenome-hsapiens-ucsc-hg19: Restore original hash. 
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-ucsc-hg19)[source]:
Restore hash from before the tarball changed in place.  It changed back.

This reverts commit fd40857938.
 2017-08-07 01:58:39 +02:00
Leo Famulari 46f3c8f289
gnu: khal: Don't propagate vdirsyncer. 
* gnu/packages/calendar.scm (khal)[propagated-inputs]: Move vdirsyncer ...
[native-inputs]: ... here.
 2017-08-06 16:58:03 -04:00
Leo Famulari fd8f946379
gnu: python-icalendar: Update to 3.11.6. 
* gnu/packages/python.scm (python-icalendar): Update to 3.11.6.
 2017-08-06 16:58:02 -04:00
Leo Famulari 03776ebd36
gnu: mpg123: Update to 1.25.4. 
* gnu/packages/mp3.scm (mpg123): Update to 1.25.4.
 2017-08-06 16:58:02 -04:00
Kei Kebreau b0c95908c0
gnu: freedoom: Update to 0.11.3. 
* gnu/packages/games.scm (freedoom): Update to 0.11.3.
[arguments]: Remove unnecessary "no" phase.
 2017-08-06 14:13:07 -04:00
Kei Kebreau f7b60fdc36
gnu: deutex: Update to 5.0.0. 
* gnu/packages/game-development.scm (deutex): Update to 5.0.0.
[source]: Change upstream URI.
[arguments]: Enable tests and restore normal "configure" and "install"
phases.
[native-inputs]: Add asciidoc.
 2017-08-06 14:13:07 -04:00
Efraim Flashner 403097d26d
gnu: Add motti. 
* gnu/packages/motti.scm (motti): New variable.
 2017-08-06 19:13:33 +03:00
Efraim Flashner b7ac10e6da
gnu: keepassx: Superseded by keepassxc. 
* gnu/packages/password-utils.scm (keepassx)[properties]: New field.
 2017-08-06 19:13:32 +03:00
Efraim Flashner 99672f7b1d
gnu: Add keepassxc. 
* gnu/packages/password-utils.scm (keepassxc): New variable.
 2017-08-06 19:13:06 +03:00
Efraim Flashner 3ea2eaa8f3
gnu: python-efl: Update to 1.20.0. 
* gnu/packages/enlightenment.scm (python-efl): Update to 1.20.0.
[source]: Add alternate source uri.
[arguments]: Enable tests.
 2017-08-06 18:13:09 +03:00
Efraim Flashner 87cd1f5c2a
gnu: efl: Update to 1.20.1. 
* gnu/packages/enlightenment.scm (efl): Update to 1.20.1.
 2017-08-06 18:13:05 +03:00
Efraim Flashner 3bfee8ff02
gnu: make-u-boot-package: Don't unnecessarily cross-compile. 
* gnu/packages/bootloaders.scm (make-u-boot-package)[native-inputs]: Only
use cross-gcc and cross-binutils if compiling for a different
architecture.
[arguments]: Only use cross compiling make-flags if cross compiling.
 2017-08-06 18:13:03 +03:00
Danny Milosavljevic 18c6a7b4c8
gnu: Add python-flask-httpauth. 
* gnu/packages/python.scm (python-flask-httpauth, python2-flask-httpauth):
New variables.
 2017-08-06 13:35:07 +02:00
ng0 abd8825f90
gnu: Add font-open-dyslexic. 
* gnu/packages/fonts.scm (font-open-dyslexic): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-06 10:49:52 +05:30
Vasile Dumitrascu 799097e445
gnu: gnucash: Update to 2.6.17. 
* gnu/packages/gnucash.scm (gnucash): Update to 2.6.17.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-06 10:01:56 +05:30
Mark H Weaver f167595ba1
Merge branch 'master' into core-updates 2017-08-06 00:23:20 -04:00
Mark H Weaver e3df6938ac
gnu: libtasn1: Add replacement to fix CVE-2017-10790. 
Based on commit 01a61d7040
by Leo Famulari <leo@famulari.name>.

* gnu/packages/patches/libtasn1-CVE-2017-10790.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (libtasn1)[replacement]: New field.
(libtasn1/fixed): New variable.
 2017-08-06 00:21:09 -04:00
Leo Famulari 01a61d7040
gnu: libtasn1: Fix CVE-2017-10790. 
* gnu/packages/patches/libtasn1-CVE-2017-10790.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/tls.scm (libtasn1/fixed)[source]: Use it.
 2017-08-05 20:17:53 -04:00
Feng Shu 91d94e28ec
gnu: emacs-exwm-x: Do not set DISPLAY. 
* gnu/packages/emacs.scm (emacs-exwm-x): Do not set DISPLAY. The issue has
been fixed upstream in exwm-0.15.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-05 18:58:58 +05:30
Feng Shu e78e38a4bb
gnu: emacs-exwm: Update to 0.15. 
* gnu/packages/emacs.scm (emacs-exwm): Update to 0.15.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-08-05 18:48:54 +05:30
Marius Bakke 7f171fdaad
gnu: git: Update to 2.14.0. 
* gnu/packages/version-control.scm (git): Update to 2.14.0.
 2017-08-05 14:07:43 +02:00
Marius Bakke eedcfa704e
gnu: lftp: Update to 4.7.8. 
* gnu/packages/ftp.scm (lftp): Update to 4.7.8.
 2017-08-05 14:07:42 +02:00
Julien Lepiller 3d5d87a3ae
gnu: Add cubicle. 
* gnu/packages/maths.scm (cubicle): New variable.
 2017-08-05 10:11:42 +02:00
Ludovic Courtès a56bf101c6
gnu: perl: Work around more "dotless @INC" build issues. 
* gnu/packages/web.scm (perl-www-curl)[arguments]: Add 'set-search-path'
phase.
* gnu/packages/bioinformatics.scm (ngs-sdk)[arguments]: Augment
'configure' phase to set PERL5LIB.
* gnu/packages/image.scm (steghide)[arguments]: Add #:phases argument.
 2017-08-05 00:31:26 +02:00
Ludovic Courtès 240d3ceff7
gnu: python-argcomplete: Add dependency on the full Bash. 
Fixes a regression introduced in
704243e0c6.

* gnu/packages/python.scm (python-argcomplete)[native-inputs]: Add BASH.
 2017-08-05 00:31:26 +02:00
Ludovic Courtès 90ea83ee95
gnu: bluez: Work around test failure on ARM. 
This aims to skip the segfaulting test at
<https://hydra.gnu.org/build/2195551>.

* gnu/packages/linux.scm (bluez)[arguments]: Add #:make-flags
when (%current-system) is "armhf-linux".
 2017-08-05 00:02:55 +02:00
Julien Lepiller 1cec346232
gnu: php: Update to 7.1.8. 
* gnu/packages/patches/gd-CVE-2017-7890.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it
* gnu/packages/php.scm (php): Update to 7.1.8.
 2017-08-04 18:58:33 +02:00
Ricardo Wurmus 8d6c845d68
gnu: Add r-crosstalk. 
* gnu/packages/web.scm (r-crosstalk): New variable.
 2017-08-04 11:23:53 +02:00
Ricardo Wurmus a3cd23b639
gnu: Add r-shiny. 
* gnu/packages/web.scm (r-shiny): New variable.
 2017-08-04 11:23:53 +02:00
Ricardo Wurmus 0b0aa76fa8
gnu: Add js-es5-shim. 
* gnu/packages/javascript.scm (js-es5-shim): New variable.
 2017-08-04 11:23:53 +02:00
Ricardo Wurmus 4f65067bde
gnu: Add js-selectize. 
* gnu/packages/javascript.scm (js-selectize): New variable.
 2017-08-04 11:23:53 +02:00
Ricardo Wurmus c4abc94d2b
gnu: Add js-datatables. 
* gnu/packages/javascript.scm (js-datatables): New variable.
 2017-08-04 11:23:53 +02:00
Ricardo Wurmus a6bbb2a0d8
gnu: Add js-highlight. 
* gnu/packages/javascript.scm (js-highlight): New variable.
 2017-08-04 11:23:53 +02:00
Ricardo Wurmus 3f48403aaf
gnu: Add js-strftime. 
* gnu/packages/javascript.scm (js-strftime): New variable.
 2017-08-04 11:23:52 +02:00
Ricardo Wurmus 68ffb6c586
gnu: Add js-json2. 
* gnu/packages/javascript.scm (js-json2): New variable.
 2017-08-04 11:23:52 +02:00
Ricardo Wurmus ed69963b03
gnu: Add js-html5shiv. 
* gnu/packages/javascript.scm (js-html5shiv): New variable.
 2017-08-04 11:23:52 +02:00
Tobias Geerinckx-Rice b316caaa9c
gnu: python-lz4: Fix typo in synopsis. 
* gnu/packages/compression.scm (python-lz4)[synopsis]: Fix typo.
 2017-08-04 05:00:26 +02:00
Tobias Geerinckx-Rice e9f6a935fb
gnu: python-lz4: Update to 0.10.1. 
* gnu/packages/compression.scm (python-lz4): Update to 0.10.1.
[native-inputs]: Add python-setuptools-scm.
 2017-08-04 04:59:48 +02:00
Tobias Geerinckx-Rice 54360c917e
gnu: diffoscope: Use HTTPS. 
* gnu/packages/package-management.scm (diffoscope)[home-page]: Use HTTPS.
 2017-08-04 04:34:41 +02:00
Tobias Geerinckx-Rice 3b4018d6f2
gnu: sshoot: Update to 1.2.6. 
* gnu/packages/vpn.scm (sshoot): Update to 1.2.6.
[home-page]: Update to new project home.
 2017-08-04 04:34:41 +02:00
Tobias Geerinckx-Rice f58be41761
gnu: fabric: Update to 1.13.2. 
* gnu/packages/admin.scm (fabric): Update to 1.13.2.  Remove outdated comments.
[source]: Remove ‘patches’.
* gnu/packages/patches/fabric-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-08-04 03:46:49 +02:00
Tobias Geerinckx-Rice 19dd5097d9
gnu: certbot, python-acme: Update to 0.17.0. 
* gnu/packages/tls.scm (certbot, python-acme, python2-acme): Update to 0.17.0.
 2017-08-04 02:32:53 +02:00
Tobias Geerinckx-Rice 9a7fd375a2
gnu: xonsh: Update to 0.5.12. 
* gnu/packages/shells.scm (xonsh): Update to 0.5.12.
 2017-08-04 02:06:39 +02:00
Tobias Geerinckx-Rice b55d15e795
gnu: cmark: Update to 0.28.0. 
* gnu/packages/markup.scm (cmark): Update to 0.28.0.
 2017-08-04 01:51:23 +02:00
Tobias Geerinckx-Rice 0a3ecfd29c
gnu: thefuck: Update to 3.19. 
* gnu/packages/admin.scm (thefuck): Update to 3.19.
 2017-08-04 01:51:23 +02:00
Tobias Geerinckx-Rice 30ac4cc7e6
gnu: zerofree: Update to 1.1.0. 
* gnu/packages/linux.scm (zerofree): Update to 1.1.0.
[home-page, source]: Update from old, inaccessible location.
 2017-08-04 01:51:22 +02:00
Tobias Geerinckx-Rice 4de4a1cfcc
gnu: zerofree: Expand description. 
* gnu/packages/linux.scm (zerofree)[description]: Expand.
 2017-08-04 01:51:22 +02:00
Tobias Geerinckx-Rice 7a068459ba
gnu: zerofree: Use ‘install-file’. 
* gnu/packages/linux.scm (zerofree)[arguments]: Simplify install phase,
using ‘install-file’.
 2017-08-04 01:51:21 +02:00
Tobias Geerinckx-Rice 0f08917df3
gnu: zerofree: Use ‘modify-phases’ syntax. 
* gnu/packages/linux.scm (zerofree)[arguments]: Use ‘modify-phases’.
 2017-08-04 01:51:21 +02:00
Tobias Geerinckx-Rice 20f8d1dd78
gnu: sshfs-fuse: Update to 2.10. 
* gnu/packages/linux.scm (sshfs-fuse): Update to 2.10.
 2017-08-04 01:51:20 +02:00
Marius Bakke c89091459f
gnu: freerdp: Update to 2.0.0-rc0 [security fixes]. 
Fixes CVE-2017-{2834,2835,2836,2837,2838,2839}.

Reported by Leo Famulari in <https://bugs.gnu.org/27939>.

* gnu/packages/rdesktop.scm (freerdp): Update to 2.0.0-rc0.
[source]: Use tarball release. Adjust file-name.
[arguments]: Remove #:phases.
 2017-08-04 00:52:52 +02:00
Marius Bakke c9f4f56b24
gnu: git: Enable tests. 
* gnu/packages/version-control.scm (git)[arguments]: Remove #:tests?. Add
'patch-tests' phase.
 2017-08-04 00:52:13 +02:00
Leo Famulari 81ca29a6d6
gnu: gnupg@1.4: Update to 1.4.22 [fixes CVE-2017-7526]. 
* gnu/packages/gnupg.scm (gnupg-1): Update to 1.4.22.
 2017-08-03 18:06:19 -04:00
Ludovic Courtès c8737b1e41
gnu: icedtea@3.5.0: Properly handle decoding error while substituting. 
* gnu/packages/java.scm (icedtea-8)[arguments] <patch-jni-libs>: Change
'encoding-error to 'decoding-error, which is what Guile 2.2 raises when
failing to decode an input file.
 2017-08-03 22:46:14 +02:00
Ricardo Wurmus 9e37e537a2
gnu: Add missing references to (gnu packages cran). 
This is a follow-up to commit a8cba9dd11.

Reported-by: Efraim Flashner <efraim@flashner.co.il>
 2017-08-03 22:15:57 +02:00
Efraim Flashner 7cb6155088
gnu: bioinformatics.scm: Use (gnu packages cran) module. 
This is a follow up to a8cba9dd11.

* gnu/packages/bioinformatics.scm: Add (gnu packages cran) to #:use-modules.
 2017-08-03 21:39:12 +03:00
Ricardo Wurmus 2267e4d3f6
gnu: r-purrr: Update to 0.2.3. 
* gnu/packages/statistics.scm (r-purrr): Update to 0.2.3.
[propagated-inputs]: Remove r-rcpp and r-lazyeval; add r-rlang.
 2017-08-03 17:53:55 +02:00
Ricardo Wurmus ceb802a31c
gnu: r-desc: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-desc): Update to 1.1.1.
 2017-08-03 17:53:55 +02:00
Ricardo Wurmus 5e0de29892
gnu: r-seqminer: Update to 6.0. 
* gnu/packages/bioinformatics.scm (r-seqminer): Update to 6.0.
 2017-08-03 17:53:54 +02:00
Ricardo Wurmus 4e0c847d59
gnu: r-wgcna: Update to 1.60. 
* gnu/packages/bioinformatics.scm (r-wgcna): Update to 1.60.
 2017-08-03 17:53:54 +02:00
Ricardo Wurmus c8a9b2bcbf
gnu: r-qtl: Update to 1.41-6. 
* gnu/packages/bioinformatics.scm (r-qtl): Update to 1.41-6.
 2017-08-03 17:53:54 +02:00
Ricardo Wurmus 023aa8ff58
gnu: r-seqinr: Update to 3.4-5. 
* gnu/packages/bioinformatics.scm (r-seqinr): Update to 3.4-5.
 2017-08-03 17:53:54 +02:00
Ricardo Wurmus 7150f1c30c
gnu: r-optparse: Update to 1.4.4. 
* gnu/packages/bioinformatics.scm (r-optparse): Update to 1.4.4.
 2017-08-03 17:53:53 +02:00
Ricardo Wurmus 3f6ec083ec
gnu: r-bookdown: Update to 0.4. 
* gnu/packages/bioinformatics.scm (r-bookdown): Update to 0.4.
 2017-08-03 17:53:53 +02:00
Ricardo Wurmus 85cd755417
gnu: r-tclust: Update to 1.2-7. 
* gnu/packages/statistics.scm (r-tclust): Update to 1.2-7.
 2017-08-03 17:53:53 +02:00
Ricardo Wurmus 6bb4bfa4bc
gnu: r-car: Update to 2.1-5. 
* gnu/packages/statistics.scm (r-car): Update to 2.1-5.
 2017-08-03 17:53:53 +02:00
Ricardo Wurmus 0f008abe7a
gnu: r-rcppeigen: Update to 0.3.3.3.0. 
* gnu/packages/statistics.scm (r-rcppeigen): Update to 0.3.3.3.0.
 2017-08-03 17:53:53 +02:00
Ricardo Wurmus 12c3bbb662
gnu: r-pbapply: Update to 1.3-3. 
* gnu/packages/statistics.scm (r-pbapply): Update to 1.3-3.
 2017-08-03 17:53:52 +02:00
Ricardo Wurmus 4431dd3a4e
gnu: r-vgam: Update to 1.0-4. 
* gnu/packages/statistics.scm (r-vgam): Update to 1.0-4.
 2017-08-03 17:53:52 +02:00
Ricardo Wurmus 41692b2963
gnu: r-mclust: Update to 5.3. 
* gnu/packages/statistics.scm (r-mclust): Update to 5.3.
 2017-08-03 17:53:52 +02:00
Ricardo Wurmus 60869fb2f8
gnu: r-flexmix: Update to 2.3-14. 
* gnu/packages/statistics.scm (r-flexmix): Update to 2.3-14.
 2017-08-03 17:53:52 +02:00
Ricardo Wurmus 62d3afc3d6
gnu: r-fastica: Update to 1.2-1. 
* gnu/packages/statistics.scm (r-fastica): Update to 1.2-1.
 2017-08-03 17:53:52 +02:00
Ricardo Wurmus df03b6f90c
gnu: r-cowplot: Update to 0.8.0. 
* gnu/packages/statistics.scm (r-cowplot): Update to 0.8.0.
 2017-08-03 17:53:51 +02:00
Ricardo Wurmus d58faa7f44
gnu: r-rann: Update to 2.5.1. 
* gnu/packages/statistics.scm (r-rann): Update to 2.5.1.
 2017-08-03 17:53:51 +02:00
Ricardo Wurmus a8c2706de2
gnu: r-statmod: Update to 1.4.30. 
* gnu/packages/statistics.scm (r-statmod): Update to 1.4.30.
 2017-08-03 17:53:51 +02:00
Ricardo Wurmus 80d1185076
gnu: r-gdata: Update to 2.18.0. 
* gnu/packages/statistics.scm (r-gdata): Update to 2.18.0.
 2017-08-03 17:53:51 +02:00
Ricardo Wurmus 2c75199c56
gnu: r-sfsmisc: Update to 1.1-1. 
* gnu/packages/statistics.scm (r-sfsmisc): Update to 1.1-1.
 2017-08-03 17:53:51 +02:00
Ricardo Wurmus 1d256438c8
gnu: r-googlesheets: Update to 0.2.2. 
* gnu/packages/statistics.scm (r-googlesheets): Update to 0.2.2.
 2017-08-03 17:53:50 +02:00
Ricardo Wurmus 9b9fef0eaf
gnu: r-tidyr: Update to 0.6.3. 
* gnu/packages/statistics.scm (r-tidyr): Update to 0.6.3.
 2017-08-03 17:53:50 +02:00
Ricardo Wurmus e1cd25bc78
gnu: r-glmnet: Update to 2.0-10. 
* gnu/packages/statistics.scm (r-glmnet): Update to 2.0-10.
 2017-08-03 17:53:50 +02:00
Ricardo Wurmus 1c576cbadb
gnu: r-irlba: Update to 2.2.1. 
* gnu/packages/statistics.scm (r-irlba): Update to 2.2.1.
 2017-08-03 17:53:50 +02:00
Ricardo Wurmus 81c057ced9
gnu: r-sparsem: Update to 1.77. 
* gnu/packages/statistics.scm (r-sparsem): Update to 1.77.
 2017-08-03 17:53:50 +02:00
Ricardo Wurmus 127b926bc1
gnu: r-segmented: Update to 0.5-2.1. 
* gnu/packages/statistics.scm (r-segmented): Update to 0.5-2.1.
 2017-08-03 17:53:49 +02:00
Ricardo Wurmus fe9917284f
gnu: r-xml: Update to 3.98-1.9. 
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.9.
 2017-08-03 17:53:49 +02:00
Ricardo Wurmus cc8ba9b69c
gnu: r-rmarkdown: Update to 1.6. 
* gnu/packages/statistics.scm (r-rmarkdown): Update to 1.6.
 2017-08-03 17:53:49 +02:00
Ricardo Wurmus 7c172eacfa
gnu: r-rcpparmadillo: Update to 0.7.900.2.0. 
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.7.900.2.0.
 2017-08-03 17:53:49 +02:00
Ricardo Wurmus 1c41d51743
gnu: r-plotrix: Update to 3.6-5. 
* gnu/packages/statistics.scm (r-plotrix): Update to 3.6-5.
 2017-08-03 17:53:49 +02:00
Ricardo Wurmus 76040b8561
gnu: r-readr: Update to 1.1.1. 
* gnu/packages/statistics.scm (r-readr): Update to 1.1.1.
 2017-08-03 17:53:48 +02:00
Ricardo Wurmus d8048a1212
gnu: r-withr: Update to 2.0.0. 
* gnu/packages/statistics.scm (r-withr): Update to 2.0.0.
 2017-08-03 17:53:48 +02:00
Ricardo Wurmus f212bf84ab
gnu: r-git2r: Update to 0.19.0. 
* gnu/packages/statistics.scm (r-git2r): Update to 0.19.0.
 2017-08-03 17:53:48 +02:00
Ricardo Wurmus 58e1ce86ab
gnu: r-checkmate: Update to 1.8.3. 
* gnu/packages/statistics.scm (r-checkmate): Update to 1.8.3.
 2017-08-03 17:53:48 +02:00
Ricardo Wurmus 63f934e672
gnu: r-backports: Update to 1.1.0. 
* gnu/packages/statistics.scm (r-backports): Update to 1.1.0.
 2017-08-03 17:53:48 +02:00
Ricardo Wurmus c832d326a1
gnu: r-formula: Update to 1.2-2. 
* gnu/packages/statistics.scm (r-formula): Update to 1.2-2.
 2017-08-03 17:53:47 +02:00
Ricardo Wurmus f05c6275b7
gnu: r-r6: Update to 2.2.2. 
* gnu/packages/statistics.scm (r-r6): Update to 2.2.2.
 2017-08-03 17:53:47 +02:00
Ricardo Wurmus b07c8c0156
gnu: r-knitr: Update to 1.16. 
* gnu/packages/statistics.scm (r-knitr): Update to 1.16.
 2017-08-03 17:53:47 +02:00
Ricardo Wurmus 6dc86e8dfc
gnu: r-formatr: Update to 1.5. 
* gnu/packages/statistics.scm (r-formatr): Update to 1.5.
 2017-08-03 17:53:47 +02:00
Ricardo Wurmus 12cd797541
gnu: r-evaluate: Update to 0.10.1. 
* gnu/packages/statistics.scm (r-evaluate): Update to 0.10.1.
 2017-08-03 17:53:47 +02:00
Ricardo Wurmus d5ce380711
gnu: r-dbi: Update to 0.7. 
* gnu/packages/statistics.scm (r-dbi): Update to 0.7.
 2017-08-03 17:53:47 +02:00
Ricardo Wurmus 831858a7d3
gnu: r-bit64: Update to 0.9-7. 
* gnu/packages/statistics.scm (r-bit64): Update to 0.9-7.
 2017-08-03 17:53:46 +02:00
Ricardo Wurmus 6fb21ed2a3
gnu: r-mgcv: Update to 1.8-18. 
* gnu/packages/statistics.scm (r-mgcv): Update to 1.8-18.
 2017-08-03 17:53:46 +02:00
Ricardo Wurmus dbeda1b4a0
gnu: r-matrix: Update to 1.2-10. 
* gnu/packages/statistics.scm (r-matrix): Update to 1.2-10.
 2017-08-03 17:53:46 +02:00
Ricardo Wurmus 74b037df64
gnu: r-foreign: Update to 0.8-69. 
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-69.
 2017-08-03 17:53:46 +02:00
Ricardo Wurmus af1eeabe89
gnu: r-boot: Update to 1.3-20. 
* gnu/packages/statistics.scm (r-boot): Update to 1.3-20.
 2017-08-03 17:53:46 +02:00
Ricardo Wurmus e584b9fc1b
gnu: r-curl: Update to 2.8.1. 
* gnu/packages/web.scm (r-curl): Update to 2.8.1.
 2017-08-03 17:53:45 +02:00
Ricardo Wurmus 53deffe5e9
gnu: r-htmlwidgets: Update to 0.9. 
* gnu/packages/web.scm (r-htmlwidgets): Update to 0.9.
 2017-08-03 17:53:45 +02:00
Ricardo Wurmus 850151058d
gnu: r-htmltools: Update to 0.3.6. 
* gnu/packages/web.scm (r-htmltools): Update to 0.3.6.
 2017-08-03 17:53:45 +02:00
Ricardo Wurmus a1e54db2ac
gnu: r-servr: Update to 0.6. 
* gnu/packages/web.scm (r-servr): Update to 0.6.
 2017-08-03 17:53:45 +02:00
Ricardo Wurmus 9fe794f0f7
gnu: r-jsonlite: Update to 1.5. 
* gnu/packages/web.scm (r-jsonlite): Update to 1.5.
 2017-08-03 17:53:45 +02:00
Ricardo Wurmus 2d81bc16a9
gnu: r-httpuv: Update to 1.3.5. 
* gnu/packages/web.scm (r-httpuv): Update to 1.3.5.
 2017-08-03 17:53:44 +02:00
Ricardo Wurmus 0f2eee0d96
gnu: r-pracma: Update to 2.0.7. 
* gnu/packages/maths.scm (r-pracma): Update to 2.0.7.
 2017-08-03 17:53:44 +02:00
Ricardo Wurmus 64c6712d03
gnu: r-knitrbootstrap: Update to 1.0.1. 
* gnu/packages/statistics.scm (r-knitrbootstrap): Update to 1.0.1.
 2017-08-03 17:53:44 +02:00
Ricardo Wurmus c628b8418a
gnu: r-ranger: Update to 0.8.0. 
* gnu/packages/statistics.scm (r-ranger): Update to 0.8.0.
[propagated-inputs]: Add r-matrix and r-rcppeigen.
 2017-08-03 17:53:44 +02:00
Ricardo Wurmus cc9a778ecc
gnu: r-hmisc: Update to 4.0-3. 
* gnu/packages/statistics.scm (r-hmisc): Update to 4.0-3.
[propagated-inputs]: Remove r-base64.
 2017-08-03 17:53:43 +02:00
Ricardo Wurmus f9b3760636
gnu: r-plotly: Update to 4.7.1. 
* gnu/packages/statistics.scm (r-plotly): Update to 4.7.1.
[propagated-inputs]: Add r-crosstalk, r-data-table, r-htmltools, and
r-rcolorbrewer.
 2017-08-03 17:53:43 +02:00
Ricardo Wurmus d59050823e
gnu: r-igraph: Update to 1.1.2. 
* gnu/packages/statistics.scm (r-igraph): Update to 1.1.2.
[propagated-inputs]: Remove r-nmf; add r-matrix and r-pkgconfig.
 2017-08-03 17:53:43 +02:00
Ricardo Wurmus 7b3688150b
gnu: r-purrr: Update to 0.2.2.2. 
* gnu/packages/statistics.scm (r-purrr): Update to 0.2.2.2.
[propagated-inputs]: Remove r-bh and r-dplyr; add r-tibble.
 2017-08-03 17:53:43 +02:00
Ricardo Wurmus 5fc74f24bf
gnu: r-devtools: Update to 1.13.3. 
* gnu/packages/statistics.scm (r-devtools): Update to 1.13.3.
[propagated-inputs]: Remove r-curl, r-digest, r-evaluate, r-roxygen2, and
r-rversions.
 2017-08-03 17:53:43 +02:00
Ricardo Wurmus aad948a0ea
gnu: r-tibble: Update to 1.3.3. 
* gnu/packages/statistics.scm (r-tibble): Update to 1.3.3.
[propagated-inputs]: Remove r-lazyeval, add r-rlang.
 2017-08-03 17:53:43 +02:00
Ricardo Wurmus a40b2c2129
gnu: r-dplyr: Update to 0.7.2. 
* gnu/packages/statistics.scm (r-dplyr): Update to 0.7.2.
[propagated-inputs]: Remove r-lazyeval, r-dbi; add r-rlang, r-plogr, r-glue,
r-pkgconfig, r-bindrcpp.
 2017-08-03 17:53:42 +02:00
Ricardo Wurmus 4bb0b4cc0a
gnu: Add r-bindrcpp. 
* gnu/packages/cran.scm (r-bindrcpp): New variable.
 2017-08-03 17:53:42 +02:00
Ricardo Wurmus eed58a0886
gnu: Add r-bindr. 
* gnu/packages/cran.scm (r-bindr): New variable.
 2017-08-03 17:53:42 +02:00
Ricardo Wurmus a8cba9dd11
gnu: r-rcpp: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-rcpp): Move from here...
* gnu/packages/cran.scm (r-rcpp): ...to here.
 2017-08-03 17:53:42 +02:00
Ricardo Wurmus 736332c79c
gnu: r-rcpp: Update to 0.12.12. 
* gnu/packages/statistics.scm (r-rcpp): Update to 0.12.12.
 2017-08-03 17:53:42 +02:00
Ricardo Wurmus 847b457253
gnu: r-plogr: Move to (gnu packages cran). 
* gnu/packages/statistics.scm (r-plogr): Move from here...
* gnu/packages/cran.scm (r-plogr): ...to here.
 2017-08-03 17:53:41 +02:00
Ricardo Wurmus 5bee6bf409
gnu: Add r-glue. 
* gnu/packages/cran.scm (r-glue): New variable.
 2017-08-03 17:53:41 +02:00
Danny Milosavljevic dd4b7476ec
gnu: Add grub-hybrid. 
* gnu/packages/bootloaders.scm (grub-hybrid): New variable.
 2017-08-03 16:35:34 +02:00
Ben Woodcroft 75e6639f36
gnu: htseq: Use PyPI URI. 
This is a follow-up to 92971d68ac.

* gnu/packages/bioinformatics.scm (htseq)[source]: Use 'pypi-uri'.
 2017-08-03 21:08:13 +10:00
Ben Woodcroft 92971d68ac
gnu: htseq: Update to 0.9.1. 
* gnu/packages/bioinformatics.scm (htseq): Update to 0.9.1.
[arguments]: Use python-3 by removing field.
[native-inputs]: Add 'python-cython'.
[propagated-inputs]: Use python3 numpy package.
[inputs]: Use python3 pysam package.  Add 'python-matplotlib'.
(python2-htseq): New variable.
(clipper)[inputs]: Use it.
 2017-08-03 21:02:30 +10:00
Efraim Flashner a8ead6f91b
gnu: vc: Limit to x86_64 and i686. 
* gnu/packages/maths.scm (vc)[supported-systems]: New field.
 2017-08-03 13:34:18 +03:00
Manolis Ragkousis 5638d71502
gnu: openscenegraph: Add 'Release' configure flag. 
* gnu/packages/graphics.scm (openscenegraph)[arguments]: Add "-DCMAKE_BUILD_TYPE=Release".
 2017-08-03 10:35:31 +03:00
Eric Bavier 68a29ab8d0
gnu: Add LeoCAD. 
* gnu/packages/lego.scm (leocad): New variable.
 2017-08-03 00:33:02 -05:00
Tobias Geerinckx-Rice 5d8312f1c6
gnu: youtube-dl: Update to 2017.07.30.1. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.07.30.1.
 2017-08-03 05:31:24 +02:00
Tobias Geerinckx-Rice 6862c72373
gnu: tor: Update to 0.3.0.10. 
* gnu/packages/tor.scm (tor): Update to 0.3.0.10.
 2017-08-03 01:56:22 +02:00
Efraim Flashner edd08fb7ac
gnu: glibc@2.22: Fix security issues. 
Fixes CVE-2015-{5180,7547}, CVE-2016-{3075,3706,4429}.

* gnu/packages/base.scm (glibc@2.22)[source]: Add patches.
* gnu/packages/patches/glibc-CVE-2015-7547.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-08-02 21:51:35 +03:00
Efraim Flashner a0ae64a334
gnu: glibc@2.23: Fix CVE-2015-5180, CVE-2016-{3075,3706,4429}. 
* gnu/packages/base.scm (glibc@2.23)[source]: Add patches.
* gnu/packages/patches/glibc-CVE-2016-3075.patch,
gnu/packages/patches/glibc-CVE-2016-3706.patch,
gnu/packages/patches/glibc-CVE-2016-4429.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register them.
 2017-08-02 21:51:33 +03:00
Efraim Flashner 575e5e4e51
gnu: glibc@2.24: Fix CVE-2015-5180. 
* gnu/packages/base.scm (glibc@2.24)[source]: Add patch.
* gnu/packages/patches/glibc-CVE-2015-5180.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-08-02 21:51:31 +03:00
Leo Famulari 2c5cf84430
gnu: python2-conda: Fix build by building with enum34. 
* gnu/packages/package-management.scm (python2-conda): Use 'python2-variant'.
[native-inputs]: Add python2-enum34.
 2017-08-02 14:39:33 -04:00
Manolis Ragkousis 9ef5940ce4
gnu: calibre: Add python2-msgpack as an input. 
* gnu/packages/ebook.scm (calibre)[inputs]: Add python2-msgpack.
 2017-08-02 20:20:12 +03:00
Efraim Flashner 721d7a6912
gnu: gcc@4.7: Don't built on aarch64. 
* gnu/packages/gcc.scm (gcc@4.7, gcc@4.8, gcc@4.9)[supported-systems]:
New field.
 2017-08-02 19:14:26 +03:00
Leo Famulari 696f1d0fb1
gnu: libpng-apng: Be sure to apply the APNG patch. 
* gnu/packages/image.scm (libpng-apng)[arguments]: Check the return status of
the patching procedures.
 2017-08-02 11:17:57 -04:00
ng0 e0958c2df8
gnu: libpng-apng: Update to 1.6.28. 
Fixes <https://bugs.gnu.org/27556>.

* gnu/packages/image.scm (libpng-apng): Update to 1.6.28.
Remove inherit of 'libpng'.
[version]: Use own version, remove 'package-version libpng'.
[source]: Don't inherit the source of libpng.
[arguments]: Update hash of libpng-apng source.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-08-02 11:10:31 -04:00
Thomas Danckaert 33485fa913
gnu: eyed3: Update to 0.8, build with python3. 
* gnu/packages/mp3.scm (eyed3): [source] Update to 0.8.
[arguments]: Disable tests; don't use python-2.
[propagated-inputs]: Add python-six and python-grako.
[native-inputs]: Remove.
 2017-08-02 14:08:33 +02:00
Thomas Danckaert a70b03d413
gnu: Add python-grako 
* gnu/packages/python.scm (python-grako): New variable.
 2017-08-02 14:08:33 +02:00
Thomas Danckaert 0abf526420
gnu: hdf4: Update to 4.12.13. 
* gnu/packages/maths.scm (hdf4): Update to 4.12.13.
 2017-08-02 14:08:24 +02:00
Tobias Geerinckx-Rice ced2d2b7ca
gnu: libvirt: Update to 3.6.0. 
* gnu/packages/virtualization.scm (libvirt): Update to 3.6.0.
 2017-08-02 07:15:21 +02:00
Tobias Geerinckx-Rice 2e508b6dc0
gnu: libvirt: Use HTTPS. 
* gnu/packages/virtualization.scm (libvirt)[source, home-page]: Use HTTPS.
 2017-08-02 07:15:21 +02:00
Roel Janssen 2f06dc0435
gnu: Add r-rlang. 
* gnu/packages/statistics.scm (r-rlang): New variable.
 2017-08-02 00:57:39 +02:00
Roel Janssen f1915a5dd0
gnu: r-deseq2: Update to 1.16.1. 
* gnu/packages/bioinformatics.scm (r-deseq2): Update to 1.16.1.
 2017-08-02 00:33:23 +02:00
Roel Janssen fd215c2978
gnu: r-annotationforge: Update to 1.18.1. 
* gnu/packages/bioinformatics.scm (r-annotationforge): Update to 1.18.1.
 2017-08-02 00:33:07 +02:00
Roel Janssen bd4a0bab5f
gnu: r-category: Update to 2.42.1. 
* gnu/packages/bioinformatics.scm (r-category): Update to 2.42.1.
 2017-08-02 00:32:46 +02:00
Roel Janssen 0ff478344b
gnu: r-biocstyle: Update to 2.4.1. 
* gnu/packages/bioinformatics.scm (r-biocstyle): Update to 2.4.1.
 2017-08-02 00:32:31 +02:00
Roel Janssen 9c4348d8c4
gnu: r-dnacopy: Update to 1.50.1. 
* gnu/packages/bioinformatics.scm (r-dnacopy): Update to 1.50.1.
 2017-08-02 00:32:11 +02:00
Roel Janssen 3ec25eb2a8
gnu: r-iranges: Update to 2.10.2. 
* gnu/packages/bioinformatics.scm (r-iranges): Update to 2.10.2.
 2017-08-02 00:31:46 +02:00
Roel Janssen 6252dd0f15
gnu: r-genomeinfodb: Update to 1.12.2. 
* gnu/packages/bioinformatics.scm (r-genomeinfodb): Update to 1.12.2.
 2017-08-02 00:31:28 +02:00
Roel Janssen 48f5d283b2
gnu: r-variantannotation: Update to 1.22.3. 
* gnu/packages/bioinformatics.scm (r-variantannotation): Update to 1.22.3.
 2017-08-02 00:31:08 +02:00
Roel Janssen 1b4738e23c
gnu: r-limma: Update to 3.32.5. 
* gnu/packages/bioinformatics.scm (r-limma): Update to 3.32.5.
 2017-08-02 00:30:49 +02:00
Roel Janssen 1898a7832f
gnu: r-biobase: Update to 2.36.2. 
* gnu/packages/bioinformatics.scm (r-biobase): Update to 2.36.2.
 2017-08-02 00:30:27 +02:00
Roel Janssen 62eb93a7d0
gnu: r-annotationdbi: Update to 1.38.2. 
* gnu/packages/bioinformatics.scm (r-annotationdbi): Update to 1.38.2.
 2017-08-02 00:28:32 +02:00
Roel Janssen 0c6494a1db
gnu: r-biomart: Update to 2.32.1. 
* gnu/packages/bioinformatics.scm (r-biomart): Update to 2.32.1.
 2017-08-02 00:28:16 +02:00
Roel Janssen 1ff74d074e
gnu: r-biocparallel: Update to 1.10.1. 
* gnu/packages/bioinformatics.scm (r-biocparallel): Update to 1.10.1.
 2017-08-02 00:27:57 +02:00
Roel Janssen 5077bc3e2e
gnu: r-biostrings: Update to 2.44.2. 
* gnu/packages/bioinformatics.scm (r-biostrings): Update to 2.44.2.
 2017-08-02 00:27:35 +02:00
Roel Janssen adf5d0a0bc
gnu: r-delayedarray: Update to 0.2.7. 
* gnu/packages/bioinformatics.scm (r-delayedarray): Update to 0.2.7.
 2017-08-02 00:27:16 +02:00
Roel Janssen f41150f13d
gnu: r-summarizedexperiment: Update to 1.6.3. 
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.6.3.
 2017-08-02 00:26:55 +02:00
Roel Janssen 26760c80cd
gnu: r-genomicalignments: Update to 1.12.1. 
* gnu/packages/bioinformatics.scm (r-genomicalignments): Update to 1.12.1.
 2017-08-02 00:26:33 +02:00
Roel Janssen 15afa9bf8f
gnu: r-rtracklayer: Update to 1.36.4. 
* gnu/packages/bioinformatics.scm (r-rtracklayer): Update to 1.36.4.
 2017-08-02 00:26:00 +02:00
Roel Janssen 8cfaa9ab4e
gnu: r-genomicfeatures: Update to 1.28.4. 
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.28.4.
 2017-08-02 00:25:26 +02:00
Roel Janssen 9eb2714625
gnu: r-copywriter: Update to 2.8.1. 
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.8.1.
 2017-08-02 00:25:00 +02:00
Roel Janssen bfa0d1e773
gnu: r-sva: Update to 3.24.4. 
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.24.4.
 2017-08-02 00:24:27 +02:00
Roel Janssen 8060a61798
gnu: r-rsqlite: Update to 2.0. 
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.0.
 2017-08-02 00:23:16 +02:00
Roel Janssen 796237a9a4
gnu: Add r-blob. 
* gnu/packages/statistics.scm (r-blob): New variable.
 2017-08-02 00:22:33 +02:00
Roel Janssen aa184803f8
gnu: Add r-pkgconfig. 
* gnu/packages/statistics.scm (r-pkgconfig): New variable.
 2017-08-02 00:21:40 +02:00
Marius Bakke aa9780daf9
Merge branch 'master' into core-updates 2017-08-01 23:42:28 +02:00
Marius Bakke fc8f0631b4
gnu: re2: Update to 2017-08-01. 
* gnu/packages/regex.scm (re2): Update to 2017-08-01.
 2017-08-01 23:37:20 +02:00
Marius Bakke 1926fd2baa
gnu: maim: Update to 5.4.66. 
* gnu/packages/xdisorg.scm (maim): Update to 5.4.66.
 2017-08-01 23:35:31 +02:00
Marius Bakke 7d960db1e3
gnu: slop: Update to 7.3.48. 
* gnu/packages/xdisorg.scm (slop): Update to 7.3.48.
 2017-08-01 23:35:03 +02:00
Marius Bakke b73e49f595
gnu: git: Update to 2.13.4. 
* gnu/packages/version-control.scm (git): Update to 2.13.4.
 2017-08-01 23:34:41 +02:00
Roel Janssen 14fce399cc
gnu: r-foreign: Update hash after upstream tarball change. 
* gnu/packages/statistics.scm (r-foreign):  Update hash.  The only difference
  in the tarball is the metadata.  The contents are identical.
 2017-08-01 23:07:58 +02:00
Roel Janssen cdf124c607
gnu: r-foreign: Remove duplicate recipe. 
* gnu/packages/statistics.scm (r-foreign): Remove duplicate recipe.
 2017-08-01 23:06:02 +02:00
Leo Famulari d0386db493
gnu: rapidjson: Update to 1.1.0. 
* gnu/packages/web.scm (rapidjson): Update to 1.1.0.
[source]: Remove snippet.
 2017-08-01 14:42:44 -04:00
ng0 f2e1271809
gnu: Add pidentd. 
* gnu/packages/networking.scm (pidentd): New variable.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-08-01 20:57:51 +03:00
Kei Kebreau 89c9445aa2
gnu: hyperrogue: Update to 10.0e. 
* gnu/packages/games.scm (hyperrogue): Update to 10.0e.
[arguments]: Adjust accordingly.
 2017-08-01 12:14:54 -04:00
Efraim Flashner d931a4bbeb
gnu: metabat: Limit to x86_64 and i686 only. 
* gnu/packages/bioinformatics.scm (metabat)[supported-systems]: New field.
 2017-08-01 17:28:35 +03:00
Kyle Meyer 4bfdf034e2
gnu: Add emacs-yasnippet-snippets. 
* gnu/packages/emacs.scm (emacs-yasnippet-snippets): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-01 15:33:07 +02:00
Kyle Meyer 1f0d47059d
gnu: emacs-yasnippet: Upgrade to 0.12.0. 
* gnu/packages/emacs.scm (emacs-yasnippet): Upgrade to 0.12.0.
[source]: Remove an uninstalled directory from yas-snippet-dirs.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-01 15:32:59 +02:00
Ludovic Courtès 04b6d6f7f7
gnu: guile-ssh: Update to 0.11.2. 
* gnu/packages/ssh.scm (guile-ssh): Update to 0.11.2.
[source]: Remove 'patches', 'modules', and 'snippet'.
* gnu/packages/patches/guile-ssh-channel-finalization.patch,
gnu/packages/patches/guile-ssh-double-free.patch,
gnu/packages/patches/guile-ssh-rexec-bug.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove them.
 2017-08-01 15:32:07 +02:00
Adonay Felipe Nogueira 12235a124f
gnu: artanis: Unbundled guile-json and version according to documentation. 
* gnu/packages/guile.scm (artanis): Unbundled guile-json and version
according to documentation.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-08-01 15:32:07 +02:00
Muriithi Frederick Muriuki 269504a797
gnu: python-pbr-minimal: Update to 3.0.1 
* gnu/packages/python.scm (python-pbr-minimal): Update to 3.0.1
[source]: Update hash and remove patch.
* gnu/packages/patches/python-pbr-fix-man-page-support.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2017-08-01 15:21:52 +03:00
Leo Famulari 3d0fbd3c2f
gnu: libgit2: Enable SHA-1 collision detection. 
* gnu/packages/version-control.scm (libgit2)[arguments]: Enable '-DUSE_SHA1DC'
in #:configure-flags.
 2017-08-01 01:02:53 -04:00
Ben Woodcroft befb2c0e6e
gnu: ruby-bio-commandeer: Update to 0.2.0. 
* gnu/packages/ruby.scm (ruby-bio-commandeer): Update to 0.2.0.
 2017-08-01 14:09:07 +10:00
Ludovic Courtès e1ecc8908e
gnu: libmicrohttpd: Update to 0.9.55. 
* gnu/packages/gnunet.scm (libmicrohttpd): Update to 0.9.55.
[arguments]: Add 'add-missing-LDFLAGS' phase.
 2017-07-31 22:51:34 +02:00
Ludovic Courtès a6b5af0cff
gnu: xf86-video-intel: Update snapshot. 
* gnu/packages/xorg.scm (xf86-video-intel): Update to 2100efa.
Introduce 'revision' variable.
 2017-07-31 22:10:34 +02:00
Ludovic Courtès f0732ee485
gnu: guile-bytestructures: Install .go files to lib/guile/X.Y. 
* gnu/packages/guile.scm (guile-bytestructures)[arguments]: Install .go
files to OBJECT-DIR, defined as OUT/lib/guile/X.Y/site-ccache.
 2017-07-31 17:36:24 +02:00
ng0 54727850c3
gnu: tor: Remove '--enable-expensive-hardening' option. 
* gnu/packages/tor.scm (tor)[arguments]: Remove '--enable-expensive-hardening' option.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-31 17:06:45 +02:00
Peter Mikkelsen ee217402f7
gnu: erlang: Update to 20.0. 
* gnu/packages/erlang.scm (erlang): Update to 20.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-31 17:02:36 +02:00
Ludovic Courtès c27e02bf6b
gnu: network-manager: Add dependency on Newt. 
Suggested by Mark H Weaver.

* gnu/packages/gnome.scm (network-manager)[inputs]: Add NEWT.
 2017-07-31 15:23:06 +02:00
Ludovic Courtès 44b0faee6b
gnu: guile-git: Skip faulty tests on non-x86_64. 
Reported by Mark H Weaver.

* gnu/packages/guile.scm (guile-git)[arguments]: Add 'skip-tests' phase
unless on x86_64-linux.
 2017-07-31 15:23:06 +02:00
Ludovic Courtès 8ecba89b77
gnu: libgit2: Add "debug" output. 
* gnu/packages/version-control.scm (libgit2)[outputs]: New field.
 2017-07-31 15:23:06 +02:00
Ludovic Courtès 58dce7bfb5
gnu: libgit2: Update to 0.26.0. 
* gnu/packages/version-control.scm (libgit2): Update to 0.26.0.  Remove
"libgit2-use-after-free.patch".
* gnu/packages/patches/libgit2-use-after-free.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-07-31 15:23:05 +02:00
Efraim Flashner 6ce8fe4cd0
gnu: efl: Add wayland support. 
* gnu/packages/enlightenment.scm (efl)[inputs]: Add wayland-protocols.
Move mesa ...
[propagated-inputs]: ... to here. Add libinput, libxkbcommon, wayland.
[arguments]: Add flags to enable wayland, elput and drm.
 2017-07-31 15:16:23 +03:00
Efraim Flashner 0d3ecf77ba
gnu: gst-plugins-good: Update disable-failing-tests phase. 
* gnu/packages/gstreamer.scm (gst-plugins-good)[arguments]: Change the
list of tests to disable during 'disable-failing-tests phase.
 2017-07-31 15:16:21 +03:00
Leo Famulari 6484e82d4c
gnu: biber-next: Update to 2.7. 
* gnu/packages/tex.scm (biber): Update to 2.7.
 2017-07-30 20:10:43 -04:00
Leo Famulari 1fdf14e170
gnu: perl-datetime-timezone: Update to 2.13. 
* gnu/packages/perl.scm (perl-datetime-timezone): Update to 2.13.
[propagated-inputs]: Remove perl-params-validate. Add perl-namespace-autoclean,
perl-params-validationcompiler.
 2017-07-30 20:10:43 -04:00
Leo Famulari 8ec0877a6b
gnu: perl-datetime-locale: Update to 1.16. 
* gnu/packages/perl.scm (perl-datetime-locale): Update to 1.16.
[native-inputs]: Add perl-file-sharedir-install, perl-file-sharedir,
perl-test-file-sharedir-dist, perl-test-warnings, perl-test-requires,
perl-namespace-autoclean, perl-cpan-meta-check.
[propagated-inputs]: Add perl-params-validationcompiler. Remove
perl-params-validate.
 2017-07-30 20:10:43 -04:00
Leo Famulari e780fde515
gnu: perl-datetime-format-strptime: Update to 1.73. 
* gnu/packages/perl.scm (perl-datetime-format-strptime): Update to 1.73.
[propagated-inputs]: Add perl-package-deprecationmanager, perl-params-validate,
perl-sub-name, perl-test-warnings.
 2017-07-30 20:10:43 -04:00
Leo Famulari 09d94b2bab
gnu: perl-datetime-format-natural: Update to 1.05. 
* gnu/packages/perl.scm (perl-datetime-format-natural: Update to 1.05.
 2017-07-30 20:10:42 -04:00
Leo Famulari 9e5df71e7d
gnu: perl-datetime-format-flexible: Update to 0.28. 
* gnu/packages/perl.scm (perl-datetime-format-flexible): Update to 0.28.
 2017-07-30 20:10:42 -04:00
Leo Famulari dc8e21110a
gnu: perl-datetime-event-recurrence: Update to 0.19. 
* gnu/packages/perl.scm (perl-datetime-event-recurrence): Update to 0.19.
 2017-07-30 20:10:42 -04:00
Leo Famulari ff3034de5d
gnu: perl-datetime-event-local: Update to 0.13. 
* gnu/packages/perl.scm (perl-datetime-event-local): Update to 0.13.
 2017-07-30 20:10:42 -04:00
Leo Famulari d388e4e292
gnu: perl-datetime-set: Update to 0.3900. 
* gnu/packages/perl.scm (perl-datetime-set): Update to 0.3900.
 2017-07-30 20:10:41 -04:00
Leo Famulari 3404803057
gnu: perl-datetime: Update to 1.43. 
* gnu/packages/perl.scm (perl-datetime): Update to 1.43.
[native-inputs]: Add perl-cpan-meta-check.
[propagated-inputs]: Add perl-file-sharedir.
 2017-07-30 20:10:41 -04:00
Leo Famulari 7ab1833598
gnu: perl-file-sharedir-install: Update to 0.11. 
* gnu/packages/perl.scm (perl-file-sharedir-install): Update to 0.11.
[native-inputs]: Add perl-module-build.
 2017-07-30 20:10:41 -04:00
Leo Famulari 1c0c608566
gnu: perl-file-sharedir: Update to 1.104. 
* gnu/packages/perl.scm (perl-file-sharedir): Update to 1.104.
 2017-07-30 20:10:41 -04:00
Leo Famulari ed9543c0ed
gnu: perl-cpan-meta-check: Update to 0.014. 
* gnu/packages/perl.scm (perl-cpan-meta-check): Update to 0.014.
 2017-07-30 20:10:41 -04:00
Leo Famulari ccb38cdc8d
gnu: Add perl-params-validationcompiler. 
* gnu/packages/perl.scm (perl-params-validationcompiler): New variable.
 2017-07-30 20:10:40 -04:00
Leo Famulari 00ace88396
gnu: Add perl-test-file-sharedir-dist. 
* gnu/packages/perl.scm (perl-test-file-sharedir-dist): New variable.
 2017-07-30 20:10:40 -04:00
Leo Famulari a4d6a95793
gnu: Add perl-test2-plugin-nowarnings. 
* gnu/packages/perl.scm (perl-test2-plugin-nowarnings): New variable.
 2017-07-30 20:10:40 -04:00
Leo Famulari 9ad78b2c21
gnu: Add perl-test2-bundle-extended. 
* gnu/packages/perl.scm (perl-test2-bundle-extended): New variable.
 2017-07-30 20:10:40 -04:00
Leo Famulari 721fd17797
gnu: Add perl-sub-info. 
* gnu/packages/perl.scm (perl-sub-info): New variable.
 2017-07-30 20:10:40 -04:00
Leo Famulari 6d6646f932
gnu: Add perl-term-table. 
* gnu/packages/perl.scm (perl-term-table): New variable.
 2017-07-30 20:10:39 -04:00
Leo Famulari b51f02a949
gnu: Add perl-specio. 
* gnu/packages/perl.scm (perl-specio): New variable.
 2017-07-30 20:10:39 -04:00
Leo Famulari df4fc5217f
gnu: Add perl-importer. 
* gnu/packages/perl.scm (perl-importer): New variable.
 2017-07-30 20:10:39 -04:00
Leo Famulari 13d73c42f9
gnu: Add perl-file-sharedir-dist. 
* gnu/packages/perl.scm (perl-file-sharedir-dist): New variable.
 2017-07-30 20:10:35 -04:00
Ludovic Courtès 706448b193
gnu: automake: Add 1.15.1. 
* gnu/packages/autotools.scm (automake/latest): New variable.
 2017-07-30 22:31:10 +02:00
Ludovic Courtès c91171627b
gnu: guix: Search .go files of dependencies in lib/guile/. 
* gnu/packages/package-management.scm (guix)[arguments]: Add (srfi
srfi-26) to #:modules.  Introduce 'gopath', distinct from 'path'.
 2017-07-30 21:36:18 +02:00
Ludovic Courtès 1c0ee79d4d
gnu: guix: Update snapshot. 
* gnu/packages/package-management.scm (guix): Update to 228a398.
 2017-07-30 17:58:04 +02:00
Marius Bakke 9dab50179a
gnu: perl: Add missing dependencies on Module::Install. 
Perl 5.26 and later does not provide this module.

* gnu/packages/databases.scm (perl-sql-abstract)[native-inputs]: Add PERL-MODULE-INSTALL.
* gnu/packages/perl.scm (perl-moosex-emulate-class-accessor-fast,
perl-file-zglob, perl-object-signature, perl-test-utf8, perl-time-duration,
perl-benchmark-timer, perl-class-accessor-grouped,
perl-class-c3-componentised, perl-term-encoding)[native-inputs]: Likewise.
* gnu/packages/web.scm (perl-http-parser-xs, perl-uri-template,
perl-www-curl)[native-inputs]: Likewise.
* gnu/packages/xml.scm (perl-xml-atom)[native-inputs]: Likewise.
 2017-07-30 14:55:27 +02:00
Marius Bakke c918773a03
gnu: ffmpeg: Update to 3.3.3. 
* gnu/packages/video.scm (ffmpeg): Update to 3.3.3.
 2017-07-30 12:49:38 +02:00
Christopher Baines fa65e84aab
gnu: qemu: Build with support for Linux AIO 
Add libaio as an input, such that QEMU is built with support for Asynchronous
I/O (AIO).

* gnu/packages/virtualization.scm (qemu)[inputs]: Uncomment libaio.
 2017-07-30 09:56:00 +01:00
Christopher Baines 686144e986
gnu: Add memcached. 
* gnu/packages/databases.scm (memcached): New variable.
 2017-07-30 09:06:52 +01:00
宋文武 c00c90ca37
gnu: retroarch: Update to 1.6.3. 
* gnu/packages/games.scm (retroarch): Update to 1.6.3.
 2017-07-30 15:15:34 +08:00
Theodoros Foradis 85cdab64c6
gnu: yosys: Add dependency on z3. 
* gnu/packages/fpga.scm (yosys): Add z3 to propagated-inputs.
 2017-07-29 23:03:47 +02:00
Theodoros Foradis 313844d9dc
gnu: Add z3. 
* gnu/packages/maths.scm (z3): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-29 23:03:47 +02:00
Peter Mikkelsen a4078acf4a
gnu: erlang: Fix man-pages search path of 'erl -man'. 
* gnu/packages/patches/erlang-man-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/erlang.scm (erlang)[source]: Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-29 23:03:47 +02:00
Oleg Pykhalov 53ac6977ac
gnu: tome4: Clean up snippet. 
* gnu/packages/games.scm (tome4)[source](snippet): Use a single
'substitute*' call instead of 'for-each'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-29 23:03:47 +02:00
Marius Bakke baa6b77789
gnu: vim: Update to 8.0.0808. 
* gnu/packages/vim.scm (vim): Update to 8.0.0808.
[arguments]: Remove obsolete 'make-bit-reproducable' phase.
(vim-full): Update to 8.0.0808.
[arguments]: Remove 'drop-failing-tests' phase.
 2017-07-29 23:01:17 +02:00
Kyle Meyer 24b115dff5
gnu: emacs: Check GUIX_ENVIRONMENT when autoloading packages. 
Check the environment profile so that we autoload packages that are given as
arguments to "guix environment" but are not in the system or user profile.
Note that the union of Emacs packages in the system, user, and environment
profiles will be autoloaded even when --pure was passed to "guix environment",
because it's not clear how to detect that --pure was given.

* gnu/packages/aux-files/emacs/guix-emacs.el (guix-emacs-autoload-packages):
Add Emacs packages from GUIX_ENVIRONMENT profile.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2017-07-29 23:19:17 +03:00
Kyle Meyer d0a5205292
gnu: Remove emacs-seq. 
The seq.el library has been included with Emacs since version 25.1.

* gnu/packages/emacs.scm (emacs-seq): Remove variable.
(flycheck, emacs-cider)[propagated-inputs]: Remove emacs-seq.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2017-07-29 23:19:17 +03:00
Kyle Meyer 469c7ce058
gnu: Remove let-alist. 
The let-alist package has been included with Emacs since version 25.1.

* gnu/packages/emacs.scm (let-alist): Remove variable.
(flycheck, emacs-pdf-tools, emacs-sx)[propagated-inputs]: Remove let-alist.

Signed-off-by: Alex Kost <alezost@gmail.com>
 2017-07-29 23:19:16 +03:00
Alex Kost b1a6a70684
gnu: emacs-ess: Install elisp files in "guix.d". 
Fixes <http://bugs.gnu.org/27686>.
Reported by Adonay Felipe Nogueira <adfeno@openmailbox.org>.

* gnu/packages/emacs.scm (emacs-ess)[arguments]: Add LISPDIR to
'make-flags' to install *.el files into "guix.d" sub-directory.
 2017-07-29 23:18:56 +03:00
Danny Milosavljevic 444f9dccc2
gnu: grub-efi: Add mtools input. 
* gnu/packages/bootloaders.scm: Add (gnu packages mtools).
(grub-efi)[inputs]: Add mtools.
[arguments]: Add phase "use-absolute-mtools-path".
 2017-07-29 19:24:04 +02:00
Julien Lepiller 303690c405
gnu: Add coq-interval. 
* gnu/packages/ocaml.scm (coq-interval): New variable.
 2017-07-29 15:19:07 +02:00
Julien Lepiller b09c4244f7
gnu: Add coq-coquelicot. 
* gnu/packages/ocaml.scm (coq-coquelicot): New variable.
 2017-07-29 15:19:03 +02:00
Julien Lepiller 380c65de94
gnu: Add coq-mathcomp. 
* gnu/packages/ocaml.scm (coq-mathcomp): New variable.
 2017-07-29 15:18:59 +02:00
Julien Lepiller 88191acee2
gnu: Add coq-gappa. 
* gnu/packages/ocaml.scm (coq-gappa): New variable.
 2017-07-29 15:18:54 +02:00
Julien Lepiller d163d97d92
gnu: Add coq-flocq. 
* gnu/packages/ocaml.scm (coq-flocq): New variable.
 2017-07-29 15:18:45 +02:00
Marius Bakke 8f82110492
gnu: gnupg: Update to 2.1.22. 
* gnu/packages/gnupg.scm (gnupg): Update to 2.1.22.
 2017-07-29 14:47:24 +02:00
Ben Woodcroft a9085f0c5c
gnu: metabat: Update to 2.11.2. 
* gnu/packages/bioinformatics.scm (metabat): Update to 2.11.2.
 2017-07-29 22:37:47 +10:00
Jan Nieuwenhuizen 0e016722ee
gnu: mes: Update to 0.9. 
* gnu/packages/mes.scm (mes): Update to 0.9.
[arguments]: Delete `strip' phase.
[synopsis]: Rewrite to be more descriptive.
[description]: Include expanded acronym.
 2017-07-29 14:33:19 +02:00
Tobias Geerinckx-Rice 9f9b7a0d01
gnu: gptfdisk: Update to 1.0.3. 
* gnu/packages/disk.scm (gptfdisk): Update to 1.0.3.
 2017-07-29 14:15:48 +02:00
Arun Isaac b5244fcb49
gnu: arandr: Remove make-xrandr-available phase. 
wrap-program functionality is already provided by python-build-system.

* gnu/packages/xdisorg.scm (arandr): Remove make-xrandr-available phase.
 2017-07-29 16:47:37 +05:30
Oleg Pykhalov e8d9a87862
gnu: Add emacs-rpm-spec-mode. 
* gnu/packages/emacs.scm (emacs-rpm-spec-mode): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-07-29 16:41:34 +05:30
Jan Nieuwenhuizen 3b56776fb8
gnu: mescc-tools: Update to 0.2. 
* gnu/packages/mes.scm (mescc-tools): Update to 0.2.
 2017-07-29 11:37:04 +02:00
Mark H Weaver 38ba8a6116
gnu: linux-libre: Update to 4.12.4. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.4.
(%linux-libre-hash): Update hash.
 2017-07-28 21:08:51 -04:00
Mark H Weaver dfa0c66cc9
gnu: linux-libre@4.9: Update to 4.9.40. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.40.
 2017-07-28 21:08:19 -04:00
Mark H Weaver 6b96478c6d
gnu: linux-libre@4.4: Update to 4.4.79. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.79.
 2017-07-28 21:07:31 -04:00
Tobias Geerinckx-Rice 4f9dd97e65
gnu: sssd: Update to 1.15.3. 
* gnu/packages/sssd.scm (sssd): Update to 1.15.3.
[native-inputs]: Add util-linux.
 2017-07-29 01:08:17 +02:00
Tobias Geerinckx-Rice d02e19aa2c
gnu: bind: Update to 9.11.2. 
* gnu/packages/dns.scm (isc-bind): Update to 9.11.2.
 2017-07-29 00:32:00 +02:00
Oleg Pykhalov 32c4a5060e
gnu: emacs-auctex: Update to 11.91.0. 
* gnu/packages/emacs.scm (emacs-auctex): Update to 11.91.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-28 23:30:41 +02:00
Oleg Pykhalov 1f88f189eb
gnu: Add tome4. 
* gnu/packages/games.scm (tome4): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-28 23:30:41 +02:00
Ludovic Courtès 9ca8aa38ec
gnu: guix: Add dependency on Guile-Git. 
* gnu/packages/package-management.scm (guix)[arguments] <wrap-program>:
Add Guile-Git to PATH.
[propagated-inputs]: Add GUILE-GIT.
(guile2.0-guix)[propagated-inputs]: Add GUILE2.0-GIT.
 2017-07-28 18:09:44 +02:00
Ludovic Courtès 3a53759807
gnu: guile-git: Update snapshot. 
* gnu/packages/guile.scm (guile-git): Update to commit e156a10.
[native-inputs]: Add TEXINFO.
 2017-07-28 18:09:43 +02:00
Ludovic Courtès 6f0f55148d
gnu: le-certs: Create OpenSSL hash symlinks. 
* gnu/packages/certs.scm (le-certs)[arguments]: Run 'c_rehash' on the
result.
[native-inputs]: New fields.
 2017-07-28 18:09:43 +02:00
Tobias Geerinckx-Rice c4b006ba12
gnu: btrfs-progs: Update to 4.12. 
* gnu/packages/linux.scm (btrfs-progs): Update to 4.12.
[outputs]: Remove inaccurate comment on size.
 2017-07-28 16:32:04 +02:00
Ben Woodcroft f112bd26ae
gnu: redis: Update to 4.0.1. 
* gnu/packages/databases.scm (redis): Update to 4.0.1.
 2017-07-28 21:10:49 +10:00
Ben Woodcroft ac01cb0790
gnu: ruby-json-pure: Update to 2.1.0. 
* gnu/packages/ruby.scm (ruby-json-pure): Update to 2.1.0.
[arguments]: Replace 'replace-git-ls-files' phase with 'fix-rakefile'
and 'regenerate-gemspec' phases.
[inputs]: Remove ruby-permutation, ruby-utils, ragel. Add ruby-test-unit,
ruby-simplecov.
 2017-07-28 20:18:53 +10:00
Ben Woodcroft 9c14bc7a4d
gnu: bundler: Update to 1.15.3. 
* gnu/packages/ruby.scm (bundler): Update to 1.15.3.
 2017-07-28 20:18:53 +10:00
Ben Woodcroft a2a558147a
gnu: ruby-ffi: Update to 1.9.18. 
* gnu/packages/ruby.scm (ruby-ffi): Update to 1.9.18.
 2017-07-28 20:18:52 +10:00
Ben Woodcroft 00eeb45fca
gnu: redis: Update to 4.0.0. 
* gnu/packages/databases.scm (redis): Update to 4.0.0.
 2017-07-28 20:18:52 +10:00
Ben Woodcroft efb94fda64
gnu: ruby-nokogiri: Update to 1.8.0. 
* gnu/packages/ruby.scm (ruby-nokogiri): Update to 1.8.0.
 2017-07-28 20:18:52 +10:00
Ben Woodcroft 26f4a37736
gnu: ruby-mini-portile2: Update to 2.2.0. 
* gnu/packages/ruby.scm (ruby-mini-portile2): Update to 2.2.0.
 2017-07-28 20:18:51 +10:00
Marius Bakke 4685866a94
gnu: perl-xs-object-magic: Fix build with perl@5.26. 
* gnu/packages/perl.scm (perl-xs-object-magic)[native-inputs]: Add
PERL-MODULE-INSTALL.
 2017-07-28 01:31:15 +02:00
Marius Bakke 5890b40bd0
gnu: perl-mousex-nativetraits: Fix build with perl@5.26. 
* gnu/packages/perl.scm (perl-mousex-nativetraits)[native-inputs]: Add
PERL-MODULE-INSTALL.
 2017-07-28 01:31:15 +02:00
Marius Bakke ec5c986e33
gnu: perl-anyevent-i3: Update to 0.17. 
* gnu/packages/wm.scm (perl-anyevent-i3): Update to 0.17.
 2017-07-28 01:31:15 +02:00
Tobias Geerinckx-Rice 0f6cf5a61c
gnu: nautilus: Update to 3.24.2.1. 
* gnu/packages/gnome.scm (nautilus): Update to 3.24.2.1.
 2017-07-28 01:02:40 +02:00
Tobias Geerinckx-Rice 73fe4552aa
gnu: gptfdisk: Update description. 
* gnu/packages/disk.scm (gptfdisk): Remove outdated statement and use @dfn.
 2017-07-28 01:02:39 +02:00
Tobias Geerinckx-Rice 0193e3be53
gnu: goffice: Update to 3.24.2.1. 
* gnu/packages/gnome.scm (goffice): Update to 3.24.2.1.
 2017-07-28 01:02:39 +02:00
Tobias Geerinckx-Rice c8fc9a379b
gnu: shotwell: Update to 0.26.2. 
* gnu/packages/gnome.scm (shotwell): Update to 0.26.2.
 2017-07-28 01:02:39 +02:00
Marius Bakke e0b9e377f1
Merge branch 'master' into core-updates 2017-07-28 00:34:13 +02:00
Marius Bakke fb2715720a
gnu: whois: Update to 5.2.17. 
* gnu/packages/networking.scm (whois): Update to 5.2.17.
 2017-07-28 00:07:45 +02:00
Marius Bakke bd51224936
gnu: nss, nss-certs: Update to 3.32. 
This release includes minor code changes and many certificate updates:
<https://developer.mozilla.org/en-US/docs/Mozilla/Projects/NSS/NSS_3.32_release_notes>

* gnu/packages/certs.scm (nss-certs): Update to 3.32.
* gnu/packages/gnuzilla.scm (nss): Update to 3.32.
[arguments]: Prevent another test file from being installed.
* gnu/packages/patches/nss-pkgconfig.patch: Adjust.
 2017-07-28 00:07:28 +02:00
Leo Famulari 201c0e7276
gnu: perl-gd-securityimage: Fix build with Perl 5.26.0. 
* gnu/packages/gd.scm (perl-gd-securityimage)[arguments]: Set
PERL_USE_UNSAFE_INC in new 'set-env' phase.
 2017-07-27 16:22:18 -04:00
Leo Famulari 70629b6d9a
gnu: perl-feed-find: Fix build with Perl 5.26.0. 
* gnu/packages/web.scm (perl-feed-find)[arguments]: Set PERL_USE_UNSAFE_INC in
new 'set-env' phase.
 2017-07-27 16:22:17 -04:00
Marius Bakke 6571754462
gnu: nspr: Update to 4.16. 
* gnu/packages/gnuzilla.scm (nspr): Update to 4.16.
 2017-07-27 22:15:27 +02:00
Marius Bakke 90335ccea6
gnu: python-cryptography: Update to 2.0.2. 
* gnu/packages/python.scm (python-cryptography-vectors, python-cryptography):
Update to 2.0.2.
 2017-07-27 22:15:26 +02:00
Leo Famulari f27954a077
gnu: perl-encode-hanextra: Fix build with Perl 5.26.0. 
* gnu/packages/perl.scm (perl-encode-hanextra)[arguments]: Set
PERL_USE_UNSAFE_INC in new 'set-env' phase.
 2017-07-27 16:14:54 -04:00
Leo Famulari b2973d9634
gnu: subversion: Update to 1.8.18. 
* gnu/packages/version-control.scm (subversion): Update to 1.8.18.
 2017-07-27 14:33:32 -04:00
Leo Famulari 6d31c175b2
gnu: net-tools: Update to 1.60-0.479bb4a7. 
This leaves net-tools-for-tests unchanged.

Fixes <https://bugs.gnu.org/27811>.

* gnu/packages/linux.scm (net-tools): Update to 1.60-0.479bb4a7.
[source]: Use git-fetch.
[inputs]: Remove the Debian patch.
[arguments]: Use modify-phases. Remove the 'patch' phase. Disable
SELINUX and AFBLUETOOTH from build configuration.
 2017-07-27 13:39:42 -04:00
Julian Graham a812aff99c
gnu: gzochi: Update to 0.11.1. 
* gnu/packages/game-development.scm (gzochi): Update to 0.11.1.
  (gzochi)[arguments]: Remove patch for `-Werror', which is no longer
  necessary.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-27 11:47:51 +02:00
Ludovic Courtès f1be6f5b5a
gnu: openmpi: Add "static" output. 
* gnu/packages/mpi.scm (openmpi)[outputs]: New field.
[arguments]: Add 'move-static-libraries' phase.
 2017-07-27 11:47:50 +02:00
Ricardo Wurmus dd54d3d5da
gnu: po4a: Work around "dotless @INC" build issues. 
* gnu/packages/gettext.scm (po4a)[arguments]: Add build phase
"set-search-path".
 2017-07-27 10:20:23 +02:00
Ricardo Wurmus 8f2c410fc5
gnu: r-preprocesscore: Update to 1.38.1. 
* gnu/packages/statistics.scm (r-preprocesscore): Update to 1.38.1.
 2017-07-27 10:04:09 +02:00
Ricardo Wurmus 620b0468e9
gnu: Add cowsay. 
* gnu/packages/games.scm (cowsay): New variable.
 2017-07-27 10:03:37 +02:00
Tobias Geerinckx-Rice 56ab0f0c6d
gnu: nnn: Update to 1.3. 
* gnu/packages/admin.scm (nnn): Update to 1.3.
 2017-07-27 05:03:33 +02:00
Dave Love efcacc17c7
gnu: openmpi: Enable SGE support. 
* gnu/packages/mpi.scm (openmpi)[arguments]: Pass "--with-sge" in
 #:configure-flags.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-26 23:13:52 +02:00
ng0 217ce5702c
gnu: mg: Add new phase to find 'diff'. 
* gnu/packages/text-editors.scm (mg)[phases]: Add new 'correct-location-of-difftool'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-26 23:13:52 +02:00
ng0 bcd1544dd2
gnu: mg: Fetch source via HTTPS. 
* gnu/packages/text-editors.scm (mg)[source]: Use HTTPS.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-26 23:13:52 +02:00
ng0 1a5a8afea0
gnu: mg: Update to 20170401. 
* gnu/packages/text-editors.scm (mg): Update to 20170401.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-26 23:13:52 +02:00
Danny Milosavljevic 9ea61b1c6f
gnu: Add python-flask-principal. 
* gnu/packages/python.scm (python-flask-principal, python2-flask-principal):
New variables.
 2017-07-26 21:52:30 +02:00
Tobias Geerinckx-Rice 9d9fc39946
gnu: Add lziprecover. 
* gnu/packages/compression.scm (lziprecover): New variable.
 2017-07-26 19:38:59 +02:00
Leo Famulari f96dbf6b70
gnu: net-tools: Add a test-only variant and use it for GnuTLS. 
* gnu/packages/linux.scm (net-tools-for-tests): Add hidden net-tools variant.
* gnu/packages/tls.scm (gnutls)[native-inputs]: Use net-tools-for-tests instead
of net-tools.
 2017-07-26 12:06:52 -04:00
Ricardo Wurmus d39238cf3d
gnu: synfig: Fix boost build error. 
* gnu/packages/animation.scm (synfig)[arguments]: Add phase
"fix-boost-build-error".
 2017-07-26 12:27:12 +02:00
Ludovic Courtès bcd757fdb4
gnu: mg: Move to (gnu packages text-editors). 
* gnu/packages/mg.scm: Remove.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove it.
* gnu/packages/text-editors.scm (mg): New variable.
 2017-07-26 11:11:11 +02:00
Efraim Flashner 1cae188e61
gnu: glpk: Update to 4.63. 
* gnu/packages/maths.scm (glpk): Update to 4.63.
 2017-07-26 10:15:54 +03:00
Efraim Flashner 360f692783
gnu: perl-anyevent: Update to 7.14. 
* gnu/packages/libevent.scm (perl-anyevent): Update to 7.14.
 2017-07-26 09:31:30 +03:00
Danny Milosavljevic 4f038621a5
gnu: leafpad: Use glib-or-gtk build-system. 
* gnu/packages/text-editors.scm (leafpad): Use glib-or-gtk build-system.
 2017-07-26 08:19:47 +02:00
Danny Milosavljevic ff4192ff57
gnu: claws-mail: Disable (duplicate) Gtk+ icon cache generation. 
* gnu/packages/mail.scm (claws-mail)[arguments]: Add make-flags to disable
Gtk+ icon cache generation.
 2017-07-26 08:18:46 +02:00
Kei Kebreau 8ad40a69d1
gnu: evince: Update to 3.24.1. 
* gnu/packages/gnome.scm (evince): Update to 3.24.1.
[source]: Remove obsolete patch.
* gnu/packages/patches/evince-CVE-2017-1000083.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-07-25 18:41:05 -04:00
Tobias Geerinckx-Rice 980fe414c1
gnu: hplip: Update to 3.17.7. 
* gnu/packages/cups.scm (hplip): Update to 3.17.7.
 2017-07-25 23:59:21 +02:00
Tobias Geerinckx-Rice ae03ee4274
gnu: fdisk: Update to 2.0.0a1. 
* gnu/packages/disk.scm (fdisk): Update to 2.0.0a1.
[arguments]: Make sure the build finds its own headers.
 2017-07-25 23:58:34 +02:00
Tobias Geerinckx-Rice aa588d8a38
gnu: sdparm: Update to 1.10. 
* gnu/packages/disk.scm (sdparm): Update to 1.10.
 2017-07-25 23:58:34 +02:00
Oleg Pykhalov af79852c99
gnu: neofetch: Fix search path. 
* gnu/packages/admin.scm (neofetch): Fix "No such file or directory" for distro logo.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-07-25 23:07:37 +02:00
Marius Bakke 16fb1e79ca
gnu: chess: Update to 6.2.5. 
* gnu/packages/games.scm (chess): Update to 6.2.5.
 2017-07-25 23:07:37 +02:00
Marius Bakke 4eacb47de0
gnu: feh: Update to 2.19.1. 
* gnu/packages/image-viewers.scm (feh): Update to 2.19.1.
 2017-07-25 22:58:43 +02:00
Marius Bakke 5f02ea1a6d
gnu: notmuch: Update to 0.25. 
* gnu/packages/mail.scm (notmuch): Update to 0.25.
 2017-07-25 22:58:43 +02:00
Kei Kebreau 4fdab17371
gnu: python2-urwid: Actually build urwid for Python 2. 
* gnu/packages/python.scm (python2-urwid)[arguments]: Add #:python.
 2017-07-25 15:29:29 -04:00
Leo Famulari e9f468dfcd
gnu: tcpdump: Update to 4.9.1 [fixes CVE-2017-11108]. 
* gnu/packages/admin.scm (tcpdump): Update to 4.9.1.
 2017-07-25 15:25:44 -04:00
Feng Shu 90062885b7
gnu: you-get: Update to 0.4.803. 
* gnu/packages/video.scm (you-get): Update to 0.4.803.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-07-25 14:44:19 -04:00
Kei Kebreau c7db7b86ce
gnu: perl-dbd-mysql: Fix CVE-2017-10788. 
* gnu/packages/patches/perl-dbd-mysql-CVE-2017-10788.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/databases.scm (perl-dbd-mysql)[source]: Use it.
 2017-07-25 14:11:20 -04:00
Dave Love bb0f6d7526
gnu: openmpi: Description mentions MPI 3.0. 
* gnu/packages/mpi.scm (openmpi): It's MPI 3, not MPI 2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-25 18:10:08 +02:00
Dave Love 1f9bff4152
gnu: openmpi: Update to 1.10.7. 
* gnu/packages/mpi.scm (openmpi): Update to 1.10.7.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-25 18:09:27 +02:00
Ludovic Courtès 70bc608503
gnu: Add guile2.0-git. 
* gnu/packages/guile.scm (guile2.0-git): New variable.
 2017-07-25 17:46:17 +02:00
Ludovic Courtès 726ecfeb3a
gnu: Add guile2.0-bytestructures. 
* gnu/packages/patches/guile-bytestructures-name-clash.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/guile.scm (guile-bytestructures)[source]: Use it.
[arguments]: Unpack the source.
[native-inputs]: New field.
(guile2.0-bytestructures): New variable.
 2017-07-25 17:46:17 +02:00
Kei Kebreau 0093b1262b
gnu: maxima: Ensure binutils are available at runtime. 
* gnu/packages/maths.scm (maxima)[arguments]: Use modify-phases syntax.
Modify 'post-install' phase.
 2017-07-25 07:58:55 -04:00
Kei Kebreau 6b2eafaaa8
Revert "gnu: maxima: Ensure gcc is available at runtime." 
This reverts commit f2fa86cc82.
Commit 5ea8dbf0c9 fixes the underlying
issue in GNU Common Lisp.
 2017-07-25 07:58:46 -04:00
Kei Kebreau 5ea8dbf0c9
gnu: gcl: Ensure gcc and binutils are available at runtime. 
* gnu/packages/lisp.scm (gcl)[arguments]: Add -fgnu89-inline to CFLAGS.
Add GCC path to make-flags. Modify 'pre-conf' phase. Add 'wrap' phase.
 2017-07-25 07:58:06 -04:00
Mark H Weaver ebc9f7050c
gnu: webkitgtk: Update to 2.16.6 [security fixes]. 
Includes fixes for CVE-2017-7039, CVE-2017-7018, CVE-2017-7030, CVE-2017-7037,
CVE-2017-7034, CVE-2017-7055, CVE-2017-7056, CVE-2017-7064, CVE-2017-7061,
CVE-2017-7048, and CVE-2017-7046.

* gnu/packages/webkit.scm (webkitgtk): Update to 2.16.6.
 2017-07-25 07:32:25 -04:00
Leo Famulari 5b4a6ba044
gnu: xterm: Update to 330. 
* gnu/packages/xorg.scm (xterm): Update to 330.
 2017-07-24 22:54:18 -04:00
Leo Famulari 0e8fed86d8
gnu: dialog: Update to 1.3-20170509. 
* gnu/packages/ncurses.scm (dialog): Update to 1.3-20170509.
 2017-07-24 22:54:15 -04:00
Leo Famulari fce8285e4b
gnu: opus: Update to 1.2.1. 
* gnu/packages/xiph.scm (opus): Update to 1.2.1.
[source]: Use new source URL.
 2017-07-24 17:37:05 -04:00
Efraim Flashner f6062e5432
gnu: perl-data-dumper-concise: Update to 2.023. 
* gnu/packages/perl.scm (perl-data-dumper-concise): Update to 2.023.
[source]: Update source uri.
 2017-07-24 22:35:11 +03:00
Efraim Flashner 1627ca0494
gnu: perl-context-preserve: Update to 0.02. 
* gnu/packages/perl.scm (perl-context-preserve): Update to 0.02.
 2017-07-24 22:35:09 +03:00
Christopher Baines d61a894bfa
gnu: gnome: Add deja-dup. 
* gnu/packages/gnome.scm (deja-dup): New variable.
* gnu/packages/patches/deja-dup-use-ref-keyword-for-iter.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add patch file entry.
 2017-07-24 20:05:49 +01:00
Ludovic Courtès dc4f697f01
gnu: python-pexpect: Add dependency on the full Bash. 
Fixes a regression introduced in
704243e0c6.

* gnu/packages/python.scm (python-pexpect)[native-inputs]: Add BASH.
 2017-07-24 17:24:17 +02:00
Ludovic Courtès 3e6add96c5
gnu: gnome-mime-data: Do not use the bundled intltool. 
* gnu/packages/gnome.scm (gnome-mime-data)[arguments]: New field.
 2017-07-24 17:11:30 +02:00
Ludovic Courtès 23212bf9e6
gnu: perl: Work around "dotless @INC" build issues. 
* gnu/packages/perl.scm (perl-task-weaken)[arguments]: New field.
(perl-unicode-normalize): Likewise.
* gnu/packages/web.scm (perl-http-server-simple)[arguments]: Add #:phases.
 2017-07-24 16:36:13 +02:00
Ludovic Courtès e2f24597a9
gnu: perl-regexp-common: Update to 2017060201. 
* gnu/packages/perl.scm (perl-regexp-common): Update to 2017060201.
 2017-07-24 16:33:54 +02:00
Ludovic Courtès c022e11187
gnu: guix: Update snapshot. 
* gnu/packages/package-management.scm (guix): Update to f1ddfe4.
 2017-07-24 12:25:08 +02:00
Ludovic Courtès f1ddfe4f14
gnu: python-flaky: Fix Texinfo markup in description. 
* gnu/packages/python.scm (python-flaky)[description]: Escape "@".
 2017-07-24 12:05:53 +02:00
Leo Famulari e081e2dd0b
Merge branch 'master' into core-updates 2017-07-23 19:06:49 -04:00
Leo Famulari 2472f7a8f1
gnu: isc-dhcp: Update bundled bind to 9.9.10-P3. 
This fixes a regression introduced in the fix for CVE-2017-3142, in BIND
9.9.10-P2, commit ecb232bdfc.

See 'CHANGELOG' in the source distribution for more information.

* gnu/packages/admin.scm (isc-dhcp): Update bundled bind to 9.9.10-P3.
 2017-07-23 19:05:37 -04:00
Leo Famulari 5391c6c9d2
gnu: bind: Update to 9.11.1-P3. 
This fixes a regression introduced in the fix for CVE-2017-3142, in BIND
9.11.1-P2, commit faa1369e3c.

See 'CHANGELOG' in the source distribution for more information.

* gnu/packages/dns.scm (isc-bind): Update to 9.11.1-P3.
 2017-07-23 19:05:37 -04:00
Mark H Weaver c67d80563f
gnu: ncurses/gpm: Move to (gnu packages ncurses). 
This is needed to avoid compilation problems caused by the cyclic dependency
between (gnu packages ncurses) and (gnu packages linux).

* gnu/packages/linux.scm (ncurses/gpm): Move to ...
* gnu/packages/ncurses.scm (ncurses/gpm): ... here.  Fix misleading
indentation.  Add (gnu packages linux) to the module imports.
 2017-07-23 17:04:51 -04:00
Efraim Flashner fd900d68a5
gnu: Add support for aarch64's compiled kernel. 
* gnu/packages/linux.scm (linux-libre)[arguments]: Add to the regex to
find and install the aarch64-linux kernel.
* gnu/system.scm (system-linux-image-file-name): Add entry for aarch64.
 2017-07-23 23:33:18 +03:00
Efraim Flashner 826adfdb37
gnu: Add xf86-video-freedreno. 
* gnu/packages/xorg.scm (xf86-video-freedreno): New variable.
 2017-07-23 23:33:17 +03:00
Efraim Flashner 4adeb3f6e6
gnu: Add u-boot-odroid-c2. 
* gnu/packages/bootloaders.scm (u-boot-odroid-c2): New variable.
 2017-07-23 23:33:16 +03:00
Efraim Flashner 1313628339
gnu: u-boot: Update to 2017.07. 
* gnu/packages/bootloaders.scm (u-boot): Update to 2017.07.
 2017-07-23 23:33:13 +03:00
Marius Bakke 846cb73865
gnu: tevent: Update to 0.9.33. 
* gnu/packages/samba.scm (tevent): Update to 0.9.33.
 2017-07-23 22:01:29 +02:00
Marius Bakke 85a5800e52
gnu: talloc: Update to 2.1.10. 
* gnu/packages/samba.scm (talloc): Update to 2.1.10.
 2017-07-23 22:01:29 +02:00
Marius Bakke fbed150133
gnu: ldb: Update to 1.1.31. 
* gnu/packages/samba.scm (ldb): Update to 1.1.31.
[native-inputs]: Add CMOCKA.
 2017-07-23 22:01:28 +02:00
Marius Bakke 17c3f1fb67
gnu: cmocka: Update to 1.1.1. 
* gnu/packages/check.scm (cmocka): Update to 1.1.1.
 2017-07-23 22:01:28 +02:00
Marius Bakke 38bb9df150
gnu: tdb: Update to 1.3.14. 
* gnu/packages/databases.scm (tdb): Update to 1.3.14.
 2017-07-23 22:01:28 +02:00
Marius Bakke 09efef3384
gnu: python-scipy: Update to 0.19.1. 
* gnu/packages/python.scm (python-scipy): Update to 0.19.1.
[source]: Use 'pypi-uri'.
 2017-07-23 22:01:28 +02:00
Marius Bakke 71d20587a5
gnu: python-matplotlib: Update to 2.0.2. 
* gnu/packages/python.scm (python-matplotlib): Update to 2.0.2.
[source]: Use 'pypi-uri'.
 2017-07-23 22:01:28 +02:00
Marius Bakke 9e5ee6b60c
gnu: python-pyparsing: Update to 2.2.0. 
* gnu/packages/python.scm (python-pyparsing, python2-pyparsing): Update to
2.2.0.
 2017-07-23 22:01:27 +02:00
Marius Bakke 007176e710
gnu: python-pyparsing: Use 'modify-phases' syntax. 
* gnu/packages/python.scm (python-pyparsing)[arguments]<#:phases>: Use
'modify-phases'.
 2017-07-23 22:01:27 +02:00
Oleg Pykhalov 6e864d0081
gnu: Add xmobar. 
gnu/packages/wm.scm (xmobar): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-07-23 15:29:36 -04:00
Ben Woodcroft d3dce32216
gnu: metabat: Fix boost-related compilation issue. 
Reported by Leo Famulari.

* gnu/packages/patches/metabat-fix-boost-issue.patch: New file.
* gnu/packages/bioinformatics.scm (metabat): Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-07-23 22:35:52 +10:00
Efraim Flashner 8f155e3cff
gnu: bash-completion: Update to 2.7. 
* gnu/packages/bash.scm (bash-completion): Update to 2.7.
 2017-07-23 11:05:54 +03:00
Leo Famulari 6c1a317e29
Merge branch 'master' into core-updates 2017-07-23 03:42:12 -04:00
ng0 9478c05955
gnu: getmail: Update to 5.1. 
* gnu/packages/mail.scm (getmail): Update to 5.1.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-07-22 20:34:47 -04:00
Ben Woodcroft f3f68a442c
gnu: metabat: Update to 2.11.1. 
* gnu/packages/bioinformatics.scm (metabat): Update to 2.11.1.
[source]: Add patch to fix compilation.
[arguments]: Adjust regular expressions modifying 'SConstruct'.
* gnu/packages/patches/metabat-fix-compilation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-07-23 10:29:36 +10:00
Ben Woodcroft 897ab082b2
gnu: python-plastid: Update to 0.4.8. 
* gnu/packages/bioinformatics.scm (python-plastid): Update to 0.4.8.
 2017-07-23 10:29:36 +10:00
Ben Woodcroft 0620387a59
gnu: bcftools: Update to 1.5. 
* gnu/packages/bioinformatics.scm (bcftools): Update to 1.5.
[origin]: Remove fix-makefile patch.
[arguments]: Add configure flags, add LIBS make flag.  Do not delete
configure phase.
* gnu/packages/patches/bcftools-fix-makefile.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-07-23 10:29:36 +10:00
Ben Woodcroft 63fa0ffcd4
gnu: samtools: Update to 1.5. 
* gnu/packages/bioinformatics.scm (samtools): Update to 1.5.
 2017-07-23 10:29:36 +10:00
Ben Woodcroft 4fb6d1280e
gnu: htslib: Update to 1.5. 
* gnu/packages/bioinformatics.scm (htslib): Update to 1.5.
 2017-07-23 10:29:35 +10:00
Ben Woodcroft 60739965da
gnu: python-pysam: Update to 0.11.2.2. 
* gnu/packages/bioinformatics.scm (python-pysam): Update to 0.11.2.2.
 2017-07-23 10:29:35 +10:00
Ben Woodcroft bca2c57658
gnu: bamm: Use htslib-1.3. 
* gnu/packages/bioinformatics (htslib-1.3): New variable.
(bamm)[inputs]: Replace htslib with htslib-1.3.
 2017-07-23 10:29:35 +10:00
Ben Woodcroft 98593f9f51
gnu: bcftools: Update to 1.4.1. 
* gnu/packages/bioinformatics.scm (bcftools): Update to 1.4.1.
[arguments]: Move Makefile modifications from here ...
[source]: ... to added patch.  Adjust patch for update to 1.4.
* gnu/packages/patches/bcftools-fix-makefile.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-07-23 10:29:35 +10:00
Ben Woodcroft 4ab1644049
gnu: samtools: Update to 1.4.1. 
* gnu/packages/bioinformatics.scm (samtools): Update to 1.4.1.
[arguments]: Add '--with-htslib=system' configure flag.
[inputs]: Add htslib.
 2017-07-23 10:29:34 +10:00
Ben Woodcroft a9e4a1e641
gnu: htslib: Update to 1.4.1. 
* gnu/packages/bioinformatics.scm (htslib): Update to 1.4.1.
[inputs]: Add curl, openssl.
 2017-07-23 10:29:34 +10:00
Ben Woodcroft c842d42593
gnu: samtools: Use "modify-phases" syntax. 
* gnu/packages/bioinformatics.scm (samtools)[arguments]: Use "modify-phases"
syntax.
 2017-07-23 10:29:34 +10:00
ng0 c62d1a6e6c
gnu: bspwm: Update to 0.9.3. 
* gnu/packages/wm.scm (bspwm): Update to 0.9.3.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-07-22 20:17:46 -04:00
ng0 7e3c977da6
gnu: Add oksh. 
* gnu/packages/shells.scm (oksh): New variable.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-07-22 20:15:21 -04:00
Ryan Moe 36378bd57e
gnu: quassel: Enable TLS. 
* gnu/packages/patches/quassel-fix-tls-check.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/irc.scm (quassel)[source]: Use it.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-07-22 20:04:53 -04:00
Tobias Geerinckx-Rice e745221408
gnu: youtube-dl: Update to 2017.07.23. 
* gnu/packages/video.scm (youtube-dl): Update to 2017.07.23.
 2017-07-23 01:59:32 +02:00
Tobias Geerinckx-Rice 4b8b245b83
gnu: mosh: Update to 1.3.2. 
* gnu/packages/ssh.scm (mosh): Update to 1.3.2.
 2017-07-23 01:27:29 +02:00
Ricardo Wurmus a68a83f015
gnu: Add openmolar. 
* gnu/packages/medical.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Co-authored-by: Quiliro <quiliro@fsfla.org>
 2017-07-22 23:48:58 +02:00
Ricardo Wurmus 2456153adc
gnu: Add python-pyqt+qscintilla. 
* gnu/packages/qt.scm (python-pyqt+qscintilla): New variable.
 2017-07-22 23:48:58 +02:00
Ricardo Wurmus 06d04dbcfc
gnu: Add python-qscintilla. 
* gnu/packages/qt.scm (python-qscintilla): New variable.

Co-authored-by: Quiliro <quiliro@fsfla.org>
 2017-07-22 23:48:57 +02:00
Ricardo Wurmus 3befd0a97c
gnu: Add qscintilla. 
* gnu/packages/qt.scm (qscintilla): New variable.

Co-authored-by: Quiliro <quiliro@fsfla.org>
 2017-07-22 23:48:57 +02:00
Ricardo Wurmus 056468dc5f
gnu: Add cran module. 
* gnu/packages/cran.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* gnu/packages/statistics.scm (r-colorspace): Move to cran.scm.
 2017-07-22 23:48:57 +02:00
Mark H Weaver 30f8349efb
gnu: linux-libre: Update to 4.12.3. 
* gnu/packages/linux.scm (%linux-libre-version): Update to 4.12.3.
(%linux-libre-hash): Update hash.
 2017-07-22 14:46:00 -04:00
Mark H Weaver d422eac54e
gnu: linux-libre@4.9: Update to 4.9.39. 
* gnu/packages/linux.scm (linux-libre-4.9): Update to 4.9.39.
 2017-07-22 14:45:06 -04:00
Mark H Weaver f97c67a275
gnu: linux-libre@4.4: Update to 4.4.78. 
* gnu/packages/linux.scm (linux-libre-4.4): Update to 4.4.78.
 2017-07-22 14:44:24 -04:00
Ricardo Wurmus 3a4b0b126b
gnu: r-s4vectors: Update to 0.14.3. 
* gnu/packages/bioinformatics.scm (r-s4vectors): Update to 0.14.3.
 2017-07-22 17:31:19 +02:00
Ricardo Wurmus a35a1e9c13
gnu: r-genomicranges: Update to 1.28.4. 
* gnu/packages/bioinformatics.scm (r-genomicranges): Update to 1.28.4.
 2017-07-22 17:22:07 +02:00
Marius Bakke aa51da7eef
gnu: Remove python-fake-factory leftovers. 
This is a followup to c799eb2eb8.

* gnu/packages/patches/python-fake-factory-fix-build-32bit.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-07-22 15:07:45 +02:00
Marius Bakke c799eb2eb8
gnu: Remove python-fake-factory. 
Superseded by python-faker since ce7911ddae.

* gnu/packages/python.scm (python-fake-factory, python2-fake-factory):
Remove variables.
 2017-07-22 14:31:28 +02:00
Marius Bakke 2580c2f07f
gnu: python-pyopenssl: Update to 17.2.0. 
* gnu/packages/patches/python-pyopenssl-17.1.0-test-overflow.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/python.scm (python-pyopenssl, python2-pyopenssl): Update to 17.2.0.
[native-inputs]: Add PYTHON-FLAKY.
[source](patches): Remove.
 2017-07-22 14:31:28 +02:00
Marius Bakke 4e52739c61
gnu: Add python-flaky. 
* gnu/packages/python.scm (python-flaky, python2-flaky): New variables.
 2017-07-22 14:31:27 +02:00
Marius Bakke 6027cb8a82
gnu: maim: Update to 5.4.64. 
* gnu/packages/xdisorg.scm (maim): Update to 5.4.64.
 2017-07-22 14:31:27 +02:00
Marius Bakke eb2b5f9d03
gnu: slop: Update to 6.3.47. 
* gnu/packages/xdisorg.scm (slop): Update to 6.3.47.
[inputs]: Add GLEW.
 2017-07-22 14:31:27 +02:00
Tobias Geerinckx-Rice 0cd95cefe0
gnu: parallel: Update to 20170722. 
* gnu/packages/parallel.scm (parallel): Update to 20170722.
 2017-07-22 13:47:26 +02:00
Tobias Geerinckx-Rice bc35c9d318
gnu: font-gnu-unifont: Update to 10.0.05. 
* gnu/packages/fonts.scm (font-gnu-unifont): Update to 10.0.05.
 2017-07-22 13:47:26 +02:00
Tobias Geerinckx-Rice f7975a3bde
gnu: nano: Update to 2.8.6. 
* gnu/packages/nano.scm (nano): Update to 2.8.6.
 2017-07-22 13:47:25 +02:00
Tobias Geerinckx-Rice f03d8d67a5
gnu: acct: Update to 6.6.4. 
* gnu/packages/acct.scm (acct): Update to 6.6.4.
 2017-07-22 13:47:25 +02:00
Muriithi Frederick Muriuki 84fcb58050
gnu: Add conda. 
* gnu/packages/package-management.scm (conda): New variable.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-07-22 12:26:30 +02:00
Muriithi Frederick Muriuki 4bc08b6e79
gnu: Add python-conda. 
* gnu/packages/package-management.scm (python-conda, python2-conda): New
variables.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
 2017-07-22 12:26:29 +02:00
Muriithi Frederick Muriuki 513d35f191
gnu: Add python-anaconda-client. 
* gnu/packages/package-management.scm (python-anaconda-client,
python2-anaconda-client): New variables.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-07-22 12:26:29 +02:00
Muriithi Frederick Muriuki 1f84ff5135
gnu: Add python-clyent. 
* gnu/packages/python.scm (python-clyent, python2-clyent): New variables.
 2017-07-22 12:26:29 +02:00
Muriithi Frederick Muriuki 3fee003950
gnu: Update python-pytz to 2017.2. 
* gnu/packages/python.scm (python-pytz, python2-pytz): Update to 2017.2.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-07-22 12:26:29 +02:00
Tobias Geerinckx-Rice de469015c4
gnu: man-pages: Update to 4.12. 
* gnu/packages/man.scm (man-pages): Update to 4.12.
 2017-07-22 12:18:58 +02:00
Eric Bavier 1ffe41711b
gnu: tint2: Update to 0.14.6. 
* gnu/packages/xdisorg.scm (tint2): Update to 0.14.6.
 2017-07-21 22:41:24 -05:00
Leo Famulari e9185cbac6
gnu: icedtea@3: Update to 3.5.0 [security fixes]. 
Fixes CVE-2017-{10053,10067,10074,10074,10078,10081,10087,10089,10090,10096,
10101,10102,10107,10108,10109,10110,10111,10115,10116,10118,10135,10176,10193,
10198}.

* gnu/packages/java.scm (icedtea-8): Update to 3.5.0.
 2017-07-21 17:30:08 -04:00
Leo Famulari 3c14378381
gnu: vim: Update to 8.0.0727 [fixes CVE-2017-11109]. 
* gnu/packages/vim.scm (vim): Update to 8.0.0727.
(vim-full)[source]: Add field and hold back at version 8.0.0600.
 2017-07-21 15:20:23 -04:00
Leo Famulari 6f226c078c
gnu: mysql: Update to 5.7.19. 
* gnu/packages/databases.scm (mysql): Update to 5.7.19.
 2017-07-21 14:50:24 -04:00
Tobias Geerinckx-Rice 0cf9f9b1e3
gnu: libpsl: Update to 0.18.0. 
* gnu/packages/web.scm (libpsl): Update to 0.18.0.
[native-inputs]: Add pkg-config.
[inputs]: Replace icu4c with libidn2; add libunistring.
 2017-07-21 12:24:47 +02:00
Leo Famulari cd4f35c379
gnu: borg: Update to 1.0.11. 
* gnu/packages/backup.scm (borg): Update to 1.0.11.
 2017-07-21 01:23:25 -04:00
Leo Famulari f8fabfc99f
gnu: bitcoin-core: Actually build the graphical client. 
* gnu/packages/finance.scm (bitcoin-core)[inputs]: Replace qtbase with qt.
 2017-07-20 18:42:28 -04:00
Alex Vong 81c35029d4
gnu: heimdal: Fix CVE-2017-{6594,11103}. 
* gnu/packages/patches/heimdal-CVE-2017-6594.patch,
gnu/packages/patches/heimdal-CVE-2017-11103.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/kerberos.scm (heimdal)[source]: Use them.
 2017-07-20 15:33:53 -04:00
Arun Isaac cfd6a3b1ee
gnu: Add bmon. 
* gnu/packages/networking.scm (bmon): New variable.
 2017-07-20 23:19:24 +05:30
Ricardo Wurmus fb5dfa86b1
gnu: texlive-latex-mdwtools: Fix syntax error in description. 
* gnu/packages/tex.scm (texlive-latex-mdwtools)[description]: Fix texinfo
syntax error.
 2017-07-20 16:40:29 +02:00
Ricardo Wurmus 09acbb02c7
gnu: texlive-latex-environ: Fix invalid texinfo markup. 
* gnu/packages/tex.scm (texlive-latex-environ)[description]: Fix texinfo
syntax errors.
 2017-07-20 16:36:31 +02:00
Arun Isaac 0daa1d646a
gnu: Add mksh. 
* gnu/packages/shells.scm (mksh): New variable.
 2017-07-20 19:55:22 +05:30
Leo Famulari 8582e03ae5
gnu: Remove a left-over patch. 
This is a followup to commit 426b0b898f.

* gnu/packages/patches/pcre-CVE-2017-7186.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2017-07-20 09:00:36 -04:00
Leo Famulari 426b0b898f
gnu: pcre: Update replacement to 8.41 [fixes CVE-2017-{7244,7245,7246}]. 
* gnu/packages/pcre.scm (pcre)[replacement]: Update to pcre-8.41.
(pcre/fixed): Replace with ...
(pcre-8.41): ... new variable.
 2017-07-20 08:26:40 -04:00
Oleg Pykhalov c97cef0a91
gnu: Add premake4. 
* gnu/packages/build-tools.scm (premake4): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-20 11:57:13 +02:00
Gábor Boskovits 742242a5be
gnu: Add java-commons-cli@1.2. 
* gnu/packages/java.scm(java-commons-cli-1.2): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-20 11:57:12 +02:00
Theodoros Foradis 6158309450
gnu: Update g-wrap to use guile-2.2. 
* gnu/packages/guile.scm (g-wrap): [propagated-inputs]: Use guile-2.2.
[arguments]: Add "--disable-Werror" to configure-flags.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-20 11:57:12 +02:00
Ricardo Wurmus ab466d79e1
gnu: Add eolie. 
* gnu/packages/gnome.scm (eolie): New variable.
 2017-07-20 08:41:28 +02:00
Tobias Geerinckx-Rice 0762a1dbf4
gnu: perl-html-template: Update to 2.97. 
* gnu/packages/web.scm (perl-html-template): Update to 2.97.
 2017-07-20 02:10:55 +02:00
Tobias Geerinckx-Rice 1a34ca0e8f
gnu: openh264: Update to 1.7.0. 
* gnu/packages/video.scm (openh264): Update to 1.7.0.
 2017-07-20 01:36:51 +02:00
Tobias Geerinckx-Rice ba4e15ae85
gnu: gnome-mpv: Update to 0.12. 
* gnu/packages/video.scm (gnome-mpv): Update to 0.12.
 2017-07-20 01:36:50 +02:00
Jonathan Brielmaier 29ac89a635
gnu: Add 0xffff. 
* gnu/packages/flashing-tools.scm (0xffff): New variable.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-07-20 00:54:52 +02:00
Jonathan Brielmaier 05c8851695
gnu: Add libusb@0.1. 
* gnu/packages/libusb.scm (libusb-0.1): New variable.
* gnu/packages/patches/libusb-0.1-disable-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-07-20 00:54:52 +02:00
Maxim Cournoyer 7c0d4c3a6b
gnu: lapack: Fix hash of release 3.7.1 
Apparently the release was modified (cleaned-up) in-place. An issue was opened
at https://github.com/Reference-LAPACK/lapack-release/issues/4.

* gnu/packages/maths.scm (lapack): Fix sha256 hash.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-07-20 00:54:51 +02:00
Tobias Geerinckx-Rice dc05f6523e
gnu: qsyncthingtray: Update to 0.5.8. 
* gnu/packages/sync.scm (qsyncthingtray): Update to 0.5.8.
 2017-07-20 00:35:02 +02:00
Tobias Geerinckx-Rice 53cea7594c
gnu: dub: Update to 1.4.0. 
* gnu/packages/ldc.scm (dub): Update to 1.4.0.
 2017-07-20 00:34:57 +02:00
Ludovic Courtès b7158b767b
gnu: guile-bash: Add dependency on the "full" Bash. 
Fixes a regression introduced in
704243e0c6.

* gnu/packages/guile.scm (guile-bash)[native-inputs]: Add BASH.
 2017-07-19 22:59:18 +02:00
Ricardo Wurmus e7304ab18b
gnu: Add python-sphinx-1.6. 
* gnu/packages/python.scm (python-sphinx-1.6): New variable.
 2017-07-19 22:27:03 +02:00
Ricardo Wurmus 5f94ec913f
gnu: Add python-sphinxcontrib-websupport. 
* gnu/packages/python.scm (python-sphinxcontrib-websupport): New variable.
 2017-07-19 22:27:02 +02:00
Ricardo Wurmus 423d2136f0
gnu: Add python-xapian-bindings. 
* gnu/packages/search.scm (python-xapian-bindings): New variable.
 2017-07-19 22:27:02 +02:00
Leo Famulari 6d5deda16d
gnu: graphicsmagick: Update to 1.3.26. 
* gnu/packages/imagemagick.scm (graphicsmagick): Update to 1.3.26.
[source]: Use url-fetch and add SourceForge URL. Remove snippet.
 2017-07-19 13:56:43 -04:00
Leo Famulari 8016393eab
gnu: mpv: Update to 0.26.0. 
* gnu/packages/video.scm (mpv): Update to 0.26.0.
 2017-07-19 10:33:31 -04:00
Ricardo Wurmus fd40857938
gnu: r-bsgenome-hsapiens-ucsc-hg19: Update hash. 
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-ucsc-hg19)[source]:
Update hash because the tarball changed in place.
 2017-07-19 14:39:37 +02:00
Ricardo Wurmus 1fb9b6782b
gnu: snakemake: Update to 3.13.3. 
* gnu/packages/python.scm (snakemake): Update to 3.13.3.
 2017-07-19 14:39:37 +02:00
Ricardo Wurmus 688fbf572e
gnu: guitarix: Update to 0.35.5. 
* gnu/packages/audio.scm (guitarix): Update to 0.35.5.
 2017-07-19 14:39:37 +02:00
Efraim Flashner 2324541bd0
gnu: sortmerna: Limit support to x86_64 and i686 only. 
* gnu/packages/bioinformatics.scm (sortmerna)[supported-systems]: New field.
 2017-07-19 14:37:47 +03:00
Ludovic Courtès a388c951dd
gnu: totem: Do not build static libraries. 
* gnu/packages/gnome.scm (totem)[arguments]: Pass "--disable-static".
This reduces the size of Totem from 11 MiB to 9 MiB.
 2017-07-19 11:33:02 +02:00
Arun Isaac d670267cbd
gnu: wayland: Improve fix-graphviz phase. 
* gnu/packages/freedesktop.scm (wayland)[arguments]: Return #t from
fix-graphviz phase. Add punctuation and upstream bug report link to comments.
 2017-07-19 14:49:47 +05:30
Tobias Geerinckx-Rice 644e5f17df
download: Add OpenBSD mirrors. 
* guix/download.scm (%mirrors) <openbsd>: Add HTTPS OpenBSD mirrors.
* gnu/packages/ntp.scm (openntpd)[source]: Use them.
* gnu/packages/ssh.scm (openssh)[source]: Likewise.
* gnu/packages/tls.scm (libressl)[source]: Likewise.
 2017-07-19 01:42:08 +02:00
Tobias Geerinckx-Rice b225b1bec2
gnu: openntpd: Update to 6.1p1. 
* gnu/packages/ntp.scm (openntpd): Update to 6.1p1.
 2017-07-19 01:06:55 +02:00
Tobias Geerinckx-Rice c48fa0ad32
gnu: tlp: Update to 1.0. 
* gnu/packages/linux.scm (tlp): Update to 1.0.
 2017-07-19 01:06:54 +02:00
Tobias Geerinckx-Rice 137a330988
gnu: meson: Update to 0.41.1. 
* gnu/packages/build-tools.scm (meson) Update to 0.41.1.
 2017-07-19 01:06:54 +02:00
Ludovic Courtès ec5c24f9a8
gnu: totem: Disable automatic plugin installation. 
* gnu/packages/gnome.scm (totem)[arguments]: Add #:configure-flags.
 2017-07-18 22:46:47 +02:00
Jelle Licht 45c18f8529
gnu: node: Add search path specification for 'NODE_PATH'. 
* gnu/packages/node.scm (node)[native-search-paths]: New field.
 2017-07-18 17:49:02 +02:00
Tobias Geerinckx-Rice e333efd53a
gnu: libstaroffice: Update to 0.0.4. 
* gnu/packages/libreoffice.scm (libstaroffice): Update to 0.0.4.
 2017-07-18 17:14:38 +02:00
Ludovic Courtès 2acfe022a7
gnu: guile-static-stripped: Update to 2.2. 
* gnu/packages/make-bootstrap.scm (%guile-static): Replace GUILE-2.0
with GUILE-2.2.  Use "guile-2.2-default-utf8.patch" instead of
"guile-default-utf8.patch".
* gnu/packages/patches/guile-2.2-default-utf8.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
 2017-07-18 15:31:12 +02:00
Ludovic Courtès 920f2c42ce
gnu: guile: Make relocatable patch version-independent. 
* gnu/packages/patches/guile-relocatable.patch: Use
SCM_EFFECTIVE_VERSION instead of "2.0".
 2017-07-18 15:31:12 +02:00
Tobias Geerinckx-Rice e4e525096b
gnu: moka-icon-theme: Update to 5.3.6. 
* gnu/packages/gnome.scm (moka-icon-theme): Update to 5.3.6.
 2017-07-18 13:46:23 +02:00
Tobias Geerinckx-Rice 29ddf4b6e8
gnu: edi: Update to 0.5.1. 
* gnu/packages/enlightenment.scm (edi): Update to 0.5.1.
 2017-07-18 13:46:23 +02:00
Ricardo Wurmus 84de27c83b
gnu: enblend-enfuse: Use texlive-tiny. 
* gnu/packages/photo.scm (enblend-enfuse)[native-inputs]: Replace
texlive-minimal with texlive-tiny.
 2017-07-18 10:00:51 +02:00
Ricardo Wurmus 9840b8faaf
gnu: c-toxcore: Update to 0.1.9. 
* gnu/packages/messaging.scm (c-toxcore): Update to 0.1.9.
[build-system]: Switch to cmake-build-system.
[native-inputs]: Remove autoconf, automake, libtool, and check.
[inputs]: Rename to...
[propagated-inputs]: ...this.
[arguments]: Remove field.
 2017-07-18 09:58:56 +02:00
ng0 8b5bf30804
gnu: Rename (gnu packages gforth) to (gnu packages forth). 
* gnu/local.mk (GNU_SYSTEM_MODULES): Rename gforth.scm to forth.scm.
* gnu/packages/gforth.scm: Rename file to forth.scm.
* gnu/packages/forth.scm: Renamed from gforth.scm.
 2017-07-18 09:58:56 +02:00
Ricardo Wurmus 8b89c1717c
gnu: python-numpy-documentation: Use texlive-union. 
* gnu/packages/python.scm (python-numpy-documentation)[native-inputs]: Replace
"texlive" with a texlive-union.
 2017-07-18 09:58:56 +02:00
Efraim Flashner 2805f9b2a0
gnu: raxml: Limit to x86_64 and i686 only. 
* gnu/packages/bioinformatics.scm (raxml)[supported-systems]: New field.
 2017-07-18 09:00:10 +03:00
Leo Famulari 4c4485f304
gnu: qemu: Fix CVE-2017-11334. 
* gnu/packages/patches/qemu-CVE-2017-11334.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/virtualization.scm (qemu)[source]: Use it.
 2017-07-17 23:47:03 -04:00
Leo Famulari 144c8db9bd
gnu: chicken: Fix CVE-2017-11343. 
* gnu/packages/patches/chicken-CVE-2017-11343.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/scheme.scm (chicken)[source]: Use it.
 2017-07-17 23:47:00 -04:00
Marius Bakke 27305769de
gnu: python-cryptograpy: Update to 2.0. 
* gnu/packages/python.scm (python-cryptography-vectors,
python2-cryptography-vectors, python-cryptography, python2-cryptography):
Update to 2.0.
 2017-07-18 01:31:10 +02:00
Marius Bakke b77cc624ec
gnu: orc: Update to 0.4.27. 
* gnu/packages/gstreamer.scm (orc): Update to 0.4.27.
 2017-07-18 01:30:16 +02:00
Leo Famulari 867baed07f
gnu: imagemagick: Update to 6.9.9-0. 
* gnu/packages/imagemagick.scm (imagemagick): Update to 6.9.9-0.
 2017-07-17 18:20:51 -04:00
Ludovic Courtès 6d833b13b7
gnu: Remove glibc@2.21 and its traces. 
* gnu/packages/base.scm (glibc-2.21): Remove.
* gnu/system/locale.scm (localedef-command)[maybe-version-directory]:
Remove.  Replace call with use of 'package-version'.
(single-locale-directory): Remove 'version>=' conditional.
 2017-07-17 23:41:36 +02:00
Efraim Flashner 1cbcbc8600
gnu: screen: Update to 4.6.1. 
* gnu/packages/screen.scm (screen): Update to 4.6.1.
 2017-07-17 22:35:06 +03:00
Alex Vong 70e7367df1
gnu: emacs-ahungry-theme: Upgrade to 1.4.0. 
* gnu/packages/emacs.scm (emacs-ahungry-theme): Upgrade to 1.4.0.

Signed-off-by: Leo Famulari <leo@famulari.name>
 2017-07-17 12:06:39 -04:00
Leo Famulari da20c38f35
gnu: dash: Use the release tarball. 
* gnu/packages/shells.scm (dash)[source]: Use the release tarball
instead of a Git checkout.
[native-inputs]: Remove field.
[arguments]: Remove 'bootstrap' phase.
 2017-07-17 11:48:46 -04:00
Feng Shu 371ca85f52
gnu: font-wqy-zenhei: Use 'font-build-system'. 
* gnu/packages/fonts.scm (font-wqy-zenhei): Switch to font-build-system.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-17 15:13:41 +02:00
Feng Shu 7fc6ce46f9
gnu: font-wqy-microhei: Use 'font-build-system'. 
* gnu/packages/fonts.scm (font-wqy-microhei): Switch to font-build-system.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-17 15:13:41 +02:00
Andy Patterson 9b7ee28d57
gnu: Add Poly/ML. 
* gnu/packages/sml.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-07-17 15:13:41 +02:00
Efraim Flashner 7ad2a4f1d5
gnu: supertuxkart: Fix build on aarch64. 
* gnu/packages/games.scm (supertuxkart)[source]: Add patch.
* gnu/packages/patches/supertuxkart-angelscript-ftbfs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
 2017-07-17 15:29:56 +03:00
Ricardo Wurmus 5beecc320e
gnu: Add sooperlooper. 
* gnu/packages/patches/sooperlooper-build-with-wx-30.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/music.scm (sooperlooper): New variable.
 2017-07-17 14:01:47 +02:00
Ricardo Wurmus c58d1b5f55
gnu: texlive-union: Silence union-build. 
* gnu/packages/tex.scm (texlive-union)[arguments]: Suppress the output of
"union-build".
 2017-07-17 14:01:47 +02:00
Ricardo Wurmus 274e3d4f3e
gnu: Add texlive-latex-type1cm. 
* gnu/packages/tex.scm (texlive-latex-type1cm): New variable.
 2017-07-17 14:01:47 +02:00
Ricardo Wurmus 1b10d49405
gnu: Add texlive-fonts-txfonts. 
* gnu/packages/tex.scm (texlive-fonts-txfonts): New variable.
 2017-07-17 14:01:47 +02:00
Ricardo Wurmus 245f1f31e8
gnu: Add texlive-latex-enumitem. 
* gnu/packages/tex.scm (texlive-latex-enumitem): New variable.
 2017-07-17 14:01:47 +02:00
Ricardo Wurmus 4701946775
gnu: texlive-dvips: Install font maps. 
* gnu/packages/tex.scm (texlive-dvips)[native-inputs]: Add dvips-font-maps and
dvips-base-enc.
[arguments]: Install them.
 2017-07-17 14:01:46 +02:00
Ricardo Wurmus 263d0c829e
gnu: texlive-union: Add texlive-fontname to defaults. 
* gnu/packages/tex.scm (texlive-union): Add texlive-fontname to the default
packages
 2017-07-17 14:01:46 +02:00
Ricardo Wurmus dea67d8afe
gnu: Add texlive-fontname. 
* gnu/packages/tex.scm (texlive-fontname): New variable.
 2017-07-17 14:01:46 +02:00
Ricardo Wurmus 2584beaedd
gnu: python-ipython: Use texlive-union. 
* gnu/packages/python.scm (python-ipython)[native-inputs]: Replace "texlive"
with a texlive-union.
 2017-07-17 14:01:46 +02:00
Ricardo Wurmus 5a1ee7d835
gnu: Add texlive-latex-pstool. 
* gnu/packages/tex.scm (texlive-latex-pstool): New variable.
 2017-07-17 14:00:17 +02:00
Ricardo Wurmus f3540dbd47
gnu: Add texlive-latex-trimspaces. 
* gnu/packages/tex.scm (texlive-latex-trimspaces): New variable.
 2017-07-17 14:00:16 +02:00
Ricardo Wurmus d770d07fb5
gnu: Add texlive-latex-psfrag. 
* gnu/packages/tex.scm (texlive-latex-psfrag): New variable.
 2017-07-17 14:00:16 +02:00
Ricardo Wurmus 8c23f238e9
gnu: Add texlive-latex-ifplatform. 
* gnu/packages/tex.scm (texlive-latex-ifplatform): New variable.
 2017-07-17 14:00:16 +02:00
Ricardo Wurmus 893e3fc1c0
gnu: Add texlive-latex-filemod. 
* gnu/packages/tex.scm (texlive-latex-filemod): New variable.
 2017-07-17 14:00:16 +02:00
Ricardo Wurmus 74e9c9a463
gnu: Add texlive-latex-environ. 
* gnu/packages/tex.scm (texlive-latex-environ): New variable.
 2017-07-17 14:00:16 +02:00
Ricardo Wurmus 3236599f50
gnu: Add texlive-latex-bigfoot. 
* gnu/packages/tex.scm (texlive-latex-bigfoot): New variable.
 2017-07-17 14:00:16 +02:00
Ricardo Wurmus fedb80ee0e
gnu: Add texlive-generic-pdftex. 
* gnu/packages/tex.scm (texlive-generic-pdftex): New variable.
 2017-07-17 14:00:15 +02:00
Ricardo Wurmus 63ed869bdd
gnu: Add texlive-latex-wrapfig. 
* gnu/packages/tex.scm (texlive-latex-wrapfig): New variable.
 2017-07-17 14:00:15 +02:00
Ricardo Wurmus 3966ebbbe7
gnu: Add texlive-latex-varwidth. 
* gnu/packages/tex.scm (texlive-latex-varwidth): New variable.
 2017-07-17 14:00:15 +02:00
Ricardo Wurmus e3088297f1
gnu: Add texlive-latex-threeparttable. 
* gnu/packages/tex.scm (texlive-latex-threeparttable): New variable.
 2017-07-17 14:00:15 +02:00
Ricardo Wurmus c73d0e9d5e
gnu: Add texlive-latex-tabulary. 
* gnu/packages/tex.scm (texlive-latex-tabulary): New variable.
 2017-07-17 14:00:15 +02:00
Ricardo Wurmus e0d307d154
gnu: Add texlive-latex-parskip. 
* gnu/packages/tex.scm (texlive-latex-parskip): New variable.
 2017-07-17 14:00:15 +02:00
Ricardo Wurmus 0de81b09a9
gnu: Add texlive-latex-upquote. 
* gnu/packages/tex.scm (texlive-latex-upquote): New variable.
 2017-07-17 14:00:14 +02:00
Ricardo Wurmus d48091bed0
gnu: Add texlive-latex-mdwtools. 
* gnu/packages/tex.scm (texlive-latex-mdwtools): New variable.
 2017-07-17 14:00:14 +02:00
Ricardo Wurmus ef1e2ef07b
gnu: Add texlive-latex-framed. 
* gnu/packages/tex.scm (texlive-latex-framed): New variable.
 2017-07-17 14:00:14 +02:00
Ricardo Wurmus a8ac7c0bb4
gnu: Add texlive-latex-etoolbox. 
* gnu/packages/tex.scm (texlive-latex-etoolbox): New variable.
 2017-07-17 14:00:14 +02:00
Ricardo Wurmus 7709d4d86a
gnu: Add texlive-latex-capt-of. 
* gnu/packages/tex.scm (texlive-latex-capt-of): New variable.
 2017-07-17 14:00:14 +02:00
Ricardo Wurmus dcc8af4a64
gnu: texlive-latex-babel: Install to generic/babel. 
* gnu/packages/tex.scm (texlive-latex-babel)[arguments]: Change tex-directory
to install to the "generic" tree.
 2017-07-17 14:00:14 +02:00
Ricardo Wurmus d9d44e84f6
gnu: texlive-union: Add texlive-generic-babel-english to defaults. 
* gnu/packages/tex.scm (texlive-union): Add "texlive-generic-babel-english" to
the default inputs.
 2017-07-17 14:00:14 +02:00
Ricardo Wurmus 876a198058
gnu: Add texlive-generic-babel-english. 
* gnu/packages/tex.scm (texlive-generic-babel-english): New variable.
 2017-07-17 14:00:13 +02:00
Ricardo Wurmus fedd77c102
gnu: Add texlive-latex-cmap. 
* gnu/packages/tex.scm (texlive-latex-cmap): New variable.
 2017-07-17 14:00:13 +02:00
Ricardo Wurmus 17dce7e5d6
gnu: Add texlive-latex-fncychap. 
* gnu/packages/tex.scm (texlive-latex-fncychap): New variable.
 2017-07-17 14:00:13 +02:00
Ricardo Wurmus 32e623d0d7
gnu: Add texlive-latex-expdlist. 
* gnu/packages/tex.scm (texlive-latex-expdlist): New variable.
 2017-07-17 14:00:13 +02:00
Ricardo Wurmus adfa7a2a8e
gnu: Add texlive-latex-eqparbox. 
* gnu/packages/tex.scm (texlive-latex-eqparbox): New variable.
 2017-07-17 14:00:13 +02:00
Ricardo Wurmus de224adba7
gnu: Add texlive-latex-draftwatermark. 
* gnu/packages/tex.scm (texlive-latex-draftwatermark): New variable.
 2017-07-17 14:00:13 +02:00
Ricardo Wurmus 7cda03bd87
gnu: Add texlive-latex-dinbrief. 
* gnu/packages/tex.scm (texlive-latex-dinbrief): New variable.
 2017-07-17 14:00:12 +02:00
Ricardo Wurmus 8e732b4994
gnu: Add texlive-latex-blindtext. 
* gnu/packages/tex.scm (texlive-latex-blindtext): New variable.
 2017-07-17 14:00:12 +02:00
Ricardo Wurmus 80bf1f2138
gnu: Add texlive-latex-polyglossia. 
* gnu/packages/tex.scm (texlive-latex-polyglossia): New variable.
 2017-07-17 14:00:12 +02:00
Ricardo Wurmus 84f8035a62
gnu: Add texlive-latex-supertabular. 
* gnu/packages/tex.scm (texlive-latex-supertabular): New variable.
 2017-07-17 14:00:12 +02:00
Ricardo Wurmus f47d1a52e4
gnu: Add texlive-latex-geometry. 
* gnu/packages/tex.scm (texlive-latex-geometry): New variable.
 2017-07-17 14:00:12 +02:00
Ricardo Wurmus 5f691e2e8f
gnu: Add texlive-latex-gcite. 
* gnu/packages/tex.scm (texlive-latex-gcite): New variable.
 2017-07-17 14:00:12 +02:00
Ricardo Wurmus 9b4d5c09ab
gnu: Add texlive-latex-galois. 
* gnu/packages/tex.scm (texlive-latex-galois): New variable.
 2017-07-17 14:00:12 +02:00
Ricardo Wurmus 588b5e9611
gnu: Add texlive-latex-g-brief. 
* gnu/packages/tex.scm (texlive-latex-g-brief): New variable.
 2017-07-17 14:00:11 +02:00
Ricardo Wurmus 60b5e228c4
gnu: Add texlive-latex-amsrefs. 
* gnu/packages/tex.scm (texlive-latex-amsrefs): New variable.
 2017-07-17 14:00:11 +02:00
Ricardo Wurmus 87b4360ee8
gnu: Add texlive-latex-acronym. 
* gnu/packages/tex.scm (texlive-latex-acronym): New variable.
 2017-07-17 14:00:11 +02:00
Ricardo Wurmus 86af0f2a34
gnu: Add texlive-latex-preview. 
* gnu/packages/tex.scm (texlive-latex-preview): New variable.
 2017-07-17 14:00:11 +02:00
Ricardo Wurmus c178ffcaf2
gnu: Add texlive-latex-ucs. 
* gnu/packages/tex.scm (texlive-latex-ucs): New variable.
 2017-07-17 14:00:11 +02:00
Efraim Flashner 44455ab951
gnu: perl-file-remove: Update to 1.57. 
* gnu/packages/perl.scm (perl-file-remove): Update to 1.57.
[source]: Update source uri.
 2017-07-17 12:52:30 +03:00
Efraim Flashner 679899990d
gnu: perl-file-find-rule-perl: Update to 1.15. 
* gnu/packages/perl.scm (perl-file-find-rule-perl): Update to 1.15.
[source]: Update source uri.
 2017-07-17 12:52:28 +03:00
Oleg Pykhalov b167937900
gnu: Add emacs-org-pomodoro. 
* gnu/packages/emacs.scm (emacs-org-pomodoro): New variable.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-07-17 14:59:52 +05:30
Muriithi Frederick Muriuki f38d54f0ce
gnu: Add python-ruamel.yaml. 
* gnu/packages/serialization.scm (python-ruamel.yaml, python2-ruamel.yaml): New variables.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
 2017-07-16 22:32:06 +02:00
Marius Bakke 188ba38e85
gnu: libsodium: Update to 1.0.13. 
* gnu/packages/crypto.scm (libsodium): Update to 1.0.13.
 2017-07-16 22:13:01 +02:00
Efraim Flashner 588bd05fce
gnu: perl-datetime-format-w3cdtf: Update to 0.07. 
* gnu/packages/perl.scm (perl-datetime-format-w3cdtf): Update to 0.07.
 2017-07-16 13:38:21 +03:00