Commit Graph

1854 Commits

Author SHA1 Message Date
Gábor Boskovits accb5c3100
gnu: openjdk: Make idlj respect SOURCE_DATE_EPOCH.
* gnu/packages/patches/openjdk-10-idlj-reproducibility.patch: New file.
* gnu/packages/java.scm (openjdk10)[source]: Use it.
* gnu/locale.mk (dist_patch_DATA): Register it.
2018-12-09 12:55:36 +01:00
Leo Famulari 5d3f673db4
gnu: polkit: Fix CVE-2018-19788.
* gnu/packages/patches/polkit-CVE-2018-19788.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/polkit.scm (polkit)[source]: Use it.
2018-12-09 00:21:09 -05:00
宋文武 b779dbac72
gnu: Add liblcf.
* gnu/packages/easyrpg.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-12-09 09:11:13 +08:00
Marius Bakke fbb7b04a85
Merge branch 'master' into staging 2018-12-09 00:18:32 +01:00
Marius Bakke 8d65ae44ac
gnu: GCC@6: Update to 6.5.0.
* gnu/packages/patches/gcc-libsanitizer-fix.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gcc.scm (gcc-6): Update to 6.5.0.
[source](patches): Drop obsolete patches.
[source](snippet): Remove.
2018-12-08 19:37:47 +01:00
Ludovic Courtès 3933905c5f
Merge branch 'version-0.16.0' 2018-12-07 00:00:41 +01:00
Leo Famulari e6c28113e6
gnu: QEMU: Fix CVE-2018-16847 and CVE-2018-16867.
* gnu/packages/patches/qemu-CVE-2018-16847.patch,
gnu/packages/patches/qemu-CVE-2018-16867.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/virtualization.scm (qemu)[source]: Use them.
2018-12-06 16:16:54 -05:00
Stefan Stefanović 4163f2467b
gnu: elogind: Update to 239.2.
* gnu/packages/freedesktop.scm (elogind): Update to 239.2.
[source](patches): Remove elogind-glibc-2.27.patch.
[source](snippet): Remove snippet.
[arguments]:
<#:tests?>: Enable tests.
<#:configure-flags>: Adjust build paths. Disable some tests.
<#:make-flags>: Remove argument.
<#:phases>[patch-locale-header]: Remove phase.
<#:phases>[clean-runpath]: Add phase.
<#:phases>[bootstrap]: Remove phase.
<#:phases>[fix-pkttyagent-path]: Add phase.
<#:phases>[fix-service-file]: Remove phase.
<#:phases>[add-libcap-to-search-path]: Remove phase.
<#:phases>[remove-uaccess-tag]: Remove phase.
<#:phases>[change-pid-file-path]: Add phase.
[build-system]: Switch to meson-build-system.
[native-inputs]: Sort native-inputs list.
Remove gperf package version constraint.
Remove: autoconf, automake, libtool, intltool.
Add: docbook-xml-4.2.
[inputs]: Remove: linux-libre-headers.
* gnu/packages/patches/elogind-glibc-2.27.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch file.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-12-06 20:22:41 +01:00
Ludovic Courtès c16c119d0a
gnu: quilt: Use shorter file names for patches.
We were reaching the 99-character limit of POSIX tar.

* gnu/packages/patches/quilt-compat-getopt-fix-option-with-nondigit-param.patch:
Rename to...
* gnu/packages/patches/quilt-getopt-nondigit-param.patch: ... this.
* gnu/packages/patches/quilt-compat-getopt-fix-second-separator.patch:
Rename to...
* gnu/packages/patches/quilt-getopt-second-separator.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/patchutils.scm (quilt)[source](patches): Likewise.
2018-12-05 00:08:28 +01:00
Marius Bakke 4115e8ea3b
gnu: json-glib: Update to 1.4.4.
* gnu/packages/patches/json-glib-fix-tests-32bit.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gnome.scm (json-glib): Update to 1.4.4.
[source](patches): Remove.
2018-12-04 20:05:20 +01:00
Leo Famulari c05c1910db
gnu: Beets: Fix compatibility with Python 3.7.
* gnu/packages/patches/beets-python-3.7-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
*  gnu/packages/music.scm (beets)[source]: Use it.
2018-12-03 17:30:30 -05:00
Marius Bakke 99f63f011d
Merge branch 'master' into staging 2018-12-03 19:15:17 +01:00
Ludovic Courtès 194451347d
Merge branch 'core-updates' 2018-12-03 08:52:17 +01:00
Eric Bavier 37b82ccc39
handbrake: Update to 1.1.2.
* gnu/packages/video.scm (handbrake): Update to 1.1.2.
[source]: Use direct download url.  Remove upstreamed patch.  Patch make
fragments in snippet.
[inputs]: Use latest ffmpeg.  Add jansson and opus.
[arguments]: Remove 'disable-contrib phase, which is now in source snippet.
Move 'fix-x265-linking phase fix to #:configure-flags.
[license]: Use 'gpl2' as clarified in LICENSE.
* gnu/packages/patches/handbrake-pkg-config-path.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-12-01 09:42:25 -06:00
Efraim Flashner 5deb0c670d
gnu: blender: Use newer ffmpeg.
* gnu/packages/graphics.scm (blender)[source]: Add patch for newer
ffmpeg compatability.
[inputs]: Replace ffmpeg-2.8 with ffmpeg.
* gnu/packages/patches/blender-newer-ffmpeg.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-11-30 11:14:27 +02:00
Eric Bavier 5f230fb279
patchutils: Update to 0.3.4.
* gnu/packages/patchutils.scm (patchutils): Update to 0.3.4.
[arguments]: Simplify 'patch-test-scripts' phase.
* gnu/packages/patches/patchutils-xfail-gendiff-tests.patch: Rename to...
* gnu/packages/patches/patchutils-test-perms.patch: ...this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2018-11-30 00:21:25 -06:00
Marius Bakke 25ca46985c
Merge branch 'master' into core-updates 2018-11-29 15:56:49 +01:00
Ludovic Courtès c324ad52b6
gnu: lirc: Build reproducibly.
* gnu/packages/patches/lirc-reproducible-build.patch: New file.
* gnu/packages/lirc.scm (lirc)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-11-29 14:11:35 +01:00
Ludovic Courtès f2c99fe52b
gnu: rust: Shorten patch file name.
This file name was too long to fit in a tar archive.

* gnu/packages/patches/rust-mdbook-support-reproducible-builds-by-forcing-window.search.patch:
Rename to...
* gnu/packages/patches/rust-reproducible-builds.patch: ... this.
* gnu/packages/rust.scm (rust-1.27, rust): Adjust accordingly.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2018-11-29 13:14:22 +01:00
Robin Templeton 0a059eaee8
gnu: Add arcanist.
* gnu/packages/phabricator.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-29 10:00:50 +01:00
Jonathan Brielmaier 5019ee6c2a
gnu: Add missing patch to local.mk.
This was forgotten in 082d9383d1.

* gnu/local.mk (dist_patch_DATA): Add "ghc-haddock-library-unbundle.patch".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-11-29 09:32:04 +01:00
Ricardo Wurmus 4236959de8
gnu: scribus: Fix build with recent Poppler.
Suggested by ngz on #guix.

* gnu/packages/patches/scribus-poppler.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/scribus.scm (scribus)[source]: Add patch.
2018-11-27 23:56:12 +01:00
Efraim Flashner 8e59c5febd
gnu: x265: Fix building on armhf-linux.
* gnu/packages/video.scm (x265)[patches]: Add patch.
[arguments]: Add a configure-flag to disable assembly. Adjust a custom
phase to recognize armv8 as 32-bit arm when masquerading as armhf-linux.
2018-11-27 19:58:01 +02:00
Eric Bavier 579a9cdec7
gnu: Add libopenshot.
* gnu/packages/video.scm (libopenshot): New variable.
* gnu/packages/patches/libopenshot-tests-with-system-libs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-11-26 19:03:54 -06:00
Danny Milosavljevic bc0d24292d
gnu: mono: Make build reproducible.
* gnu/packages/patches/mono-mdoc-timestamping.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mono.scm (mono)[source]: Use patch.
[arguments]<#:phases>[make-reproducible]: New phase.
<#:phases>[set-env]: Set SOURCE_DATE_EPOCH.
2018-11-27 00:36:47 +01:00
Björn Höfling 644af6c870
gnu: aegisub: Fix build.
* gnu/packages/patches/aegisub-boost68.patch: New file
* gnu/local.mk: Add it.
* gnu/packages/video.scm (aegisub)[source]: Use patch.
2018-11-25 23:29:09 +01:00
Marius Bakke 1e92d311c3
gnu: randomjungle: Do not build static binaries.
* gnu/packages/patches/randomjungle-disable-static-build.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/machine-learning.scm (randomjungle)[source](patches): Add it.
[arguments]: Add "--disable-static" to #:configure-flags.
2018-11-25 20:38:34 +01:00
Marius Bakke 4820b75de0
Merge branch 'master' into core-updates 2018-11-24 19:44:05 +01:00
Pierre Neidhardt 96cfa168e5
gnu: clojure: Move to new clojure.scm.
* gnu/local.mk (clojure): Include new clojure.scm.
* gnu/packages/clojure.scm: Add clojure, clojure-algo-generic,
  clojure-algo-monads, clojure-core-match, clojure-instaparse,
  clojure-tools-macro.
* gnu/packages/lisp.scm: Remove clojure, clojure-algo-generic,
  clojure-algo-monads, clojure-core-match, clojure-instaparse,
  clojure-tools-macro.
2018-11-24 15:20:51 +01:00
Marius Bakke 4d8f4a3f00
Merge branch 'master' into core-updates 2018-11-24 01:58:18 +01:00
Vagrant Cascadian 74e35e8c94
gnu: Add u-boot-pinebook.
* gnu/packages/patches/u-boot-pinebook-a64-update-dts.patch: New file.
* gnu/packages/patches/u-boot-pinebook-syscon-node.patch: New file.
* gnu/packages/patches/u-boot-pinebook-mmc-calibration.patch: New file.
* gnu/packages/patches/u-boot-pinebook-video-bridge.patch: New file.
* gnu/packages/patches/u-boot-pinebook-r_i2c-controller.patch: New file.
* gnu/packages/patches/u-boot-pinebook-dts.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/bootloaders.scm (u-boot-pinebook): New exported variable.
* gnu/bootloader/u-boot.scm (u-boot-pinebook-bootloader): New exported
variable.
* gnu/system/install.scm (pinebook-installation-os): New exported variable.
2018-11-22 21:59:05 +01:00
Ricardo Wurmus 37751b480f
gnu: podofo: Add patch to fix build.
* gnu/packages/patches/podofo-cmake-3.12.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (podofo)[source]: Add patch.
2018-11-22 21:56:41 +01:00
Marius Bakke 7ff3f3d22c
gnu: python-scikit-learn: Update to 0.20.1.
* gnu/packages/patches/python-scikit-learn-fix-test-non-determinism.patch:
Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/machine-learning.scm (python-scikit-learn): Update to 0.20.1.
[source](patches): Remove.
[arguments]: Skip network tests with pytest instead of deleting files.  Make
sure $HOME is writable.
(python2-scikit-learn): Rewrite in terms of PACKAGE-WITH-PYTHON2.
2018-11-22 17:02:47 +01:00
Efraim Flashner 9cf4ff199c
Merge remote-tracking branch 'origin/master' into core-updates 2018-11-21 19:41:43 +02:00
Ludovic Courtès e555bbfc48
gnu: emacs-pdf-tools: Fix build with recent Poppler.
* gnu/packages/patches/emacs-pdf-tools-poppler.patch: New file.
* gnu/packages/emacs.scm (emacs-pdf-tools)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-11-21 17:38:00 +01:00
Ludovic Courtès e1f7912761
gnu: casync: Fix build with glibc 2.28.
* gnu/packages/patches/casync-renameat2-declaration.patch: New file.
* gnu/packages/sync.scm (casync)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-11-21 17:38:00 +01:00
Efraim Flashner 5e369f8ab9
gnu: Add pinentry-efl.
* gnu/packages/gnupg.scm (pinentry-efl): New variable.
* gnu/packages/patches/pinentry-efl.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-11-20 12:38:57 +02:00
Marius Bakke 4f70db97a0
Merge branch 'master' into core-updates 2018-11-20 01:14:12 +01:00
Marius Bakke 9acfe275ad
gnu: Add missing patch to local.mk.
This line was removed by accident in 0a41123f01.

* gnu/local.mk (dist_patch_DATA): Add "clang-3.5-libc-search-path.patch".
2018-11-20 01:11:26 +01:00
Ludovic Courtès af50b4abc0
gnu: qt@5: Fix build failure on glibc 2.28.
* gnu/packages/patches/qt-5-renameat2.patch: New file.
* gnu/packages/qt.scm (qt)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-11-18 12:28:34 +01:00
Eric Bavier 0a41123f01
gnu: Add ClamAV.
* gnu/packages/antivirus.scm: New file.
* gnu/packages/patches/clamav-system-tomsfastmath.patch,
gnu/packages/patches/clamav-config-llvm-libs.patch: New files.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add new module.
(dist_patch_DATA): Add patches.

Co-authored-by: Christopher Baines <mail@cbaines.net>
2018-11-17 00:20:44 -06:00
Eric Bavier 7ed018e8a2
gnu: Add TomsFastMath.
* gnu/packages/multiprecision.scm (tomsfastmath): New variable.
* gnu/packages/patches/tomsfastmath-constness.patch: New patch.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-11-17 00:20:44 -06:00
Maxim Cournoyer 03592a6f88
gnu: emacs-realgud: Patch configure.ac to repair the build.
This fixes https://bugs.gnu.org/33196, a build problem caused by a defective
Elisp snippet in a check in configure.ac.

* gnu/packages/patches/emacs-realgud-fix-configure-ac.patch: Add patch.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/emacs.scm (emacs-realgud)[source]: Use it.
2018-11-15 22:42:35 -05:00
Marius Bakke 79ee97a144
Merge branch 'master' into core-updates 2018-11-14 21:20:46 +01:00
Leo Famulari 021bf6af18
gnu: Poppler: Fix CVE-2018-19149.
* gnu/packages/patches/poppler-CVE-2018-19149.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/pdf.scm (poppler)[replacement]: New field.
(poppler/fixed): New variable.
(poppler-qt4, poppler-qt5): Use package/inherit.
2018-11-13 11:28:23 -05:00
Marius Bakke 8c5749f1b5
gnu: python-cffi: Fix test failure on i686.
* gnu/packages/patches/python-cffi-x87-stack-clean.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/libffi.scm (python-cffi)[source](patches): Add it.
2018-11-11 17:18:05 +01:00
Efraim Flashner 95176544d5
gnu: python-paste: Update to 3.0.4.
* gnu/packages/python-web.scm (python-paste): Update to 3.0.4.
[source]: Remove patch, add snippet to remove one test.
[native-inputs]: Add python-pytest, python-pytest-runner.
* gnu/packages/patches/python-paste-remove-website-test.patch: Remove
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-11-11 11:13:56 +02:00
Efraim Flashner 5ac2b2717f
gnu: python-networkx2: Remove variable.
* gnu/packages/python.scm (python-networkx2): Remove variable.
* gnu/packages/patches/python-networkx2-reproducible-build.patch: Remove
file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-11-11 11:13:55 +02:00
Mark H Weaver 3b14494616
gnu: icecat: Update to 60.3.0-gnu1.
* gnu/packages/gnuzilla.scm (icecat): Update to 60.3.0-gnu1.
[source]: Switch back to the normal source URI.  Remove patches that
are no longer applicable.
* gnu/packages/patches/icecat-CVE-2018-12383.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-11-10 20:28:32 -05:00
Marius Bakke 64461ba20a
Merge branch 'master' into core-updates 2018-11-09 17:02:08 +01:00
Kei Kebreau e4b62e229e
gnu: wxmaxima: Update to 18.10.1.
* gnu/packages/maths.scm (wxmaxima): Update to 18.10.1.
[source]: Update URL and remove patch.
* gnu/packages/patches/wxmaxima-do-not-use-old-gnuplot-parameters.patch: Remove
file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
2018-11-09 01:09:06 -05:00
Efraim Flashner b44b1f08f6
gnu: hplip: Remove bundled non-free blobs.
This fixes <https://bugs.gnu.org/32184>.

* gnu/packages/cups.scm (hplip)[source]: Add patch. Update snippet to
remove non-free code and binary blobs.
* gnu/packages/patches/hplip-remove-imageprocessor.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-11-07 23:16:02 +02:00
Marius Bakke 55174e668f
Merge branch 'master' into core-updates 2018-11-07 21:09:57 +01:00
Marius Bakke 1badc85068
gnu: ceph: Update to 13.2.2.
* gnu/packages/patches/ceph-skip-unittest_blockdev.patch: Adjust for 13.2.2.
* gnu/packages/patches/ceph-rocksdb-compat.patch: Delete file.
* gnu/packages/patches/ceph-detect-rocksdb.patch,
gnu/packages/patches/ceph-volume-respect-PATH.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/storage.scm (ceph): Update to 13.2.2.
[source]: Don't remove src/dpdk, which has been moved to src/spdk/dpdk and
is purged elsewhere.  Drop bundled rapidjson.  Adjust patch list.
[arguments]: Add "-DWITH_MGR_DASHBOARD_FRONTEND=OFF" and "-DWITH_SPDK=OFF" to
 #:configure-flags.   Drop obsolete "-DWITH_EMBEDDED".  Add workaround for
<https://bugs.gnu.org/30756>.  Remove obsolete test substitution.  Rework
'wrap-python-script' to be less verbose and wrap more scripts.
[native-inputs]: Add GCC-7.
[inputs]: Add OATH-TOOLKIT, RAPIDJSON and PYTHON2-SIX.
2018-11-07 21:01:12 +01:00
Ricardo Wurmus 152bebd9e0
gnu: gemma: Update to 0.98.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/patches/gemma-intel-compat.patch: Remove file.
* gnu/packages/bioinformatics.scm (gemma): Update to 0.98.
[source]: Remove patch.
[inputs]: Add eigen, gfortran:lib, and openblas.
[arguments]: Add phase "find-eigen".
2018-11-07 20:26:46 +01:00
Ludovic Courtès 4cceb1432a
gnu: libgit2: Work around test failures on 32-bit platforms.
* gnu/packages/patches/libgit2-oom-test.patch: New file.
* gnu/packages/version-control.scm (libgit2)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-11-06 17:08:46 +01:00
Tobias Geerinckx-Rice 418dd6adb5
gnu: jq: Update to 1.6.
* gnu/packages/web.scm (jq): Update to 1.6.
[source]: Remove upstreamed patch.
* gnu/packages/patches/jq-CVE-2015-8863.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-11-06 15:34:36 +01:00
Marius Bakke 3bd83e6db2
gnu: qtbase: Remove obsolete patch.
This patch is no longer needed since 7930cfc989
was merged to core-updates.

* gnu/packages/patches/qtbase-glibc-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/qt.scm (qtbase)[source](patches): Drop it.
2018-11-06 00:04:31 +01:00
Marius Bakke f4a5faa9dc
Merge branch 'master' into core-updates 2018-11-05 23:56:22 +01:00
Marius Bakke 208e82297c
gnu: xapian: Update to 1.4.9.
* gnu/packages/patches/xapian-revert-5489fb2f8.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/search.scm (xapian): Update to 1.4.9.
[source](patches): Remove.
(python-xapian-bindings): Update to 1.4.9.
2018-11-05 23:46:38 +01:00
Efraim Flashner c16913d34d
gnu: myrepos: Update to 1.20180726.
* gnu/packages/version-control.scm (myrepos): Update to 1.20180726.
[source]: Remove patch.
* gnu/packages/patches/myrepos-CVE-2018-7032.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-10-31 21:57:02 +02:00
Tobias Geerinckx-Rice 1d9a9d27ae
gnu: meandmyshadow: Update to 0.5.
* gnu/packages/games.scm (meandmyshadow): Update to 0.5.
[source]: Add unreleased bugfix patch.
[arguments]: Remove obsolete ‘set-sdl'paths’ phase.
[inputs]: Switch to SDL 2. Add lua. Remove libx11, mesa, and glu.
* gnu/packages/patches/meandmyshadow-define-paths-earlier.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-10-31 02:31:18 +01:00
Efraim Flashner 24fc8f055d
gnu: zathura-pdf-mupdf: Update to 0.3.4.
* gnu/packages/pdf.scm (zathura-pdf-mupdf): Update to 0.3.4.
[source]: Remove patch.
* gnu/packages/patches/zathura-pdf-mupdf-link-to-jpeg-libraries.patch:
Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-10-30 11:15:39 +02:00
Efraim Flashner 20a3df0fd3
gnu: mailutils: Update to 3.5.
* gnu/packages/mail.scm (mailutils): Update to 3.5.
[source]: Remove patch, remove snippet.
[native-inputs]: Remove flex, bison.
[inputs]: Remove guile-2.0, add guile-2.2.
* gnu/packages/patches/mailutils-uninitialized-memory.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-10-28 00:02:08 +03:00
Tomáš Čech e9a041577a
gnu: Add telegram-purple.
* gnu/packages/messaging.scm (telegram-purple): New variable.
* gnu/packages/patches/telegram-purple-adjust-test.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-10-27 16:39:29 +02:00
Nikolai Merinov e027a494fd
gnu: rust: Work around rust 1.25...1.27 reproducibility issues.
* gnu/packages/patches/rust-mdbook-support-reproducible-builds-by-forcing-window.search.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add new patch file.
* gnu/packages/rust.scm (rust-1.19): Use system libssh2 library.
during cargo build.  Note: libgit2 still bundled, because cargo
tests assume specific libgit2 minor release.
(rust-1.23): Inherit native-inputs from previous package.
(rust-1.25): Switch back to llvm 3.9.1 as workaround for
https://github.com/rust-lang/rust/issues/50556 issue.
(rust-1.27): Apply changes from
https://github.com/rust-lang-nursery/mdBook/pull/692 to make
generation of "searchindex.js" files reproducible. Disable cargo
test that required llvm 6.
2018-10-26 18:11:15 +02:00
Pierre Neidhardt 247b1bd2b6
gnu: Add go-github-com-ipfs-go-ipfs-cmdkit-files.
* gnu/packages/ipfs.scm (go-github-com-ipfs-go-ipfs-cmdkit-files): New variable.
2018-10-24 12:27:59 +02:00
Marius Bakke c166a88dea
Merge branch 'master' into core-updates 2018-10-22 23:07:16 +02:00
Meiyo Peng 9861bcd182
gnu: liblxqt: Update to 0.13.0.
* gnu/packages/lxqt.scm (liblxqt): Update to 0.13.0.
[source]: Remove patches.
[home-page]: Use HTTPS.
* gnu/packages/patches/liblxqt-include.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2018-10-22 22:09:51 +08:00
Ricardo Wurmus 7a1e62ca67
gnu: delly: Update to 0.7.9.
* gnu/packages/bioinformatics.scm (delly): Update to 0.7.9.
[source]: Fetch from git.
[arguments]: Add phase install-templates; use default install phase.
[native-inputs]: Remove python-2.
[home-page]: Use new home page.
* gnu/packages/patches/delly-use-system-libraries.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
2018-10-21 23:06:46 +02:00
Ricardo Wurmus 7321920cd3
gnu: crossmap: Update to 0.2.9.
* gnu/packages/bioinformatics.scm (crossmap): Update to 0.2.9.
* gnu/packages/patches/crossmap-allow-system-pysam.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
2018-10-21 23:06:45 +02:00
Ricardo Wurmus 9a6808e0c0
gnu: tophat: Update to 2.1.1.
* gnu/packages/bioinformatics.scm (tophat): Update to 2.1.1.
* gnu/packages/patches/tophat-build-with-later-seqan.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove patch.
2018-10-21 23:06:45 +02:00
Marius Bakke ffddb42d6c
Merge branch 'master' into core-updates 2018-10-21 18:06:02 +02:00
Marius Bakke b6b3e5120a
gnu: libgxps: Update to 0.3.0.
* gnu/packages/gnome.scm (libgxps): Update to 0.3.0.
[source](patches): Remove.
[build-system]: Switch to MESON-BUILD-SYSTEM.
[inputs]: Change LIBJPEG to LIBJPEG-TURBO.
* gnu/packages/patches/libgxps-CVE-2017-11590.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2018-10-21 17:57:01 +02:00
Christopher Baines 0d3f170864
gnu: Add soundconverter.
* gnu/packages/gnome.scm (soundconverter): New variable.
* gnu/packages/patches/soundconverter-remove-gconf-dependency.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-10-20 12:24:50 +01:00
Marius Bakke e8ef3cc4d6
gnu: swig: Fix build on i686.
* gnu/packages/patches/swig-guile-gc.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/swig.scm (swig)[source](patches): Use it.
2018-10-18 19:13:13 +02:00
Marius Bakke 16f14f63db
gnu: Python: Adjust grafts for core-updates merge.
This adjust the grafts from a55ebe2e3a and
90aeaee861 to apply to Python 2.7.15 and 3.7.0.

* gnu/packages/patches/python2-CVE-2018-1060.patch,
gnu/packages/patches/python2-CVE-2018-1061.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/python.scm (python-2/fixed): Remove patches that are already
present in 2.7.15.
(python-3/fixed): Remove obsolete phase.
2018-10-17 20:53:24 +02:00
Marius Bakke d02bb02f7d
Merge branch 'master' into core-updates 2018-10-17 20:47:11 +02:00
Marius Bakke a55ebe2e3a
gnu: python2: Add upstream security fixes.
This addresses CVE-2018-{1060,1061,14647,1000802}.

* gnu/packages/patches/python2-CVE-2018-1000802.patch,
gnu/packages/patches/python2-CVE-2018-1060.patch,
gnu/packages/patches/python2-CVE-2018-1061.patch,
gnu/packages/patches/python2-CVE-2018-14647.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-2/fixed): New variable.
(python-2.7)[replacement]: New field.
(python2-minimal): Use PACKAGE/INHERIT.
2018-10-17 20:34:37 +02:00
Marius Bakke 90aeaee861
gnu: python: Fix CVE-2018-14647.
* gnu/packages/patches/python-CVE-2018-14647.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/python.scm (python-3/fixed): New variable.
(python-3.6)[replacement]: New field.
(python-minimal, python-debug, wrap-python3): Use PACKAGE/INHERIT instead of
standard inheritance.
2018-10-17 20:34:37 +02:00
Clément Lassieur f1376bfabe
gnu: emacs-exwm: Update to 0.20.
* gnu/packages/emacs.scm (emacs-exwm): Update to 0.20.
[source]: Remove emacs-exwm-fix-fullscreen-issue.patch.
* gnu/local.mk (dist_patch_DATA): Remove patch.
* gnu/packages/patches/emacs-exwm-fix-fullscreen-issue.patch: Remove patch.
2018-10-16 11:10:04 +02:00
Efraim Flashner 0627f93db6
gnu: clang-runtime: Adapt for glibc@2.28.
* gnu/packages/llvm.scm (clang-runtime@3.7, clang-runtime@3.8,
clang-runtime@3.9)[patches]: Add patch to work around removed ustat.h.
* gnu/packages/patches/clang-3.5-libsanitizer-ustat-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-10-15 21:45:32 +03:00
Efraim Flashner b7028a16e6
gnu: x265: Fix building on armhf-linux and aarch64-linux.
* gnu/packages/video.scm (x265)[source]: Update list of patches.
[arguments]: Change configure flag to ensure PIC for all architectures.
* gnu/packages/patches/x265-arm-asm-primitives.patch: Remove file.
* gnu/packages/patches/x265-detect512-all-arches.patch: New file.
* gnu/local.mk (dist_patch_DATA): Update patch registry.
2018-10-15 11:40:34 +03:00
Tobias Geerinckx-Rice dfe05297f3
gnu: x265: Update to 2.9.
* gnu/packages/video.scm (x265): Update to 2.9.
[source]: Remove x265-fix-ppc64le-build.patch.
* gnu/packages/patches/x265-fix-ppc64le-build.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-10-15 06:19:37 +02:00
Efraim Flashner 0ea6af996b
gnu: python-testtools: Fix regression in test suite.
* gnu/packages/check.scm (python-testtools)[source]: Add patch.
* gnu/packages/patches/python-testtools.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-10-11 22:34:20 +03:00
Efraim Flashner e4c399fe15
gnu: clisp: Update to 2.49.92.
* gnu/packages/lisp.scm (clisp): Update to 2.49.92.
[source]: Switch to git-fetch. Remove unneeded patch.
[arguments]: Remove '--enable-portability' flag, add CFLAGS for
armhf-linux. Update list of files needing substitutions in custom
'patch-sh-and-pwd phase.
[home-page]: Update to new home-page.
* gnu/packages/patches/clisp-glibc-2.26.patch: Remove file.
& gnu/local.mk (dist_patch_DATA): Remove it.
2018-10-10 10:41:37 +03:00
Tobias Geerinckx-Rice de68ad095d
gnu: zstd: Update to 1.3.6.
* gnu/packages/compression.scm (zstd): Update to 1.3.6.
[source]: Remove merged patches.
* gnu/packages/patches/zstd-fix-stdin-list-test.patch,
gnu/packages/patches/zstd-fix-stdin-list-without-tty.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-10-09 05:42:14 +02:00
Leo Famulari e8bd1946ec
Merge branch 'master' into core-updates 2018-10-07 20:49:14 -04:00
Leo Famulari 247537da81
gnu: borg: The backup client cannot override the server-side storage quota.
* gnu/packages/patches/borg-respect-storage-quota.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/backup.scm (borg)[source]: Use it.
2018-10-07 13:57:32 -04:00
Jan Nieuwenhuizen 236fadf528
gnu: mes: Update to 0.18.
* gnu/packages/patches/mes-nyacc-0.86.0.patch: Removef file.
* gnu/local.mk (dist_patch_DATA): Remove entry.
* gnu/packages/mes.scm (mes): Update to 0.18.
2018-10-07 16:30:50 +02:00
Danny Milosavljevic 2c4be1add0
gnu: Add java-w3c-smil.
* gnu/packages/batik.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-10-07 14:14:13 +02:00
Kei Kebreau 73ca145a7e
gnu: gnucash: Update to 3.3.
* gnu/packages/patches/gnucash-disable-failing-tests.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gnucash.scm (gnucash): Update to 3.3.
[source]: Add patch.
[arguments]: Add 'set-env-vars', 'glib-or-gtk-compile-schemas', and
'glib-or-gtk-wrap' phases.
2018-10-05 13:41:08 -04:00
Tobias Geerinckx-Rice fc4738149f
gnu: Add bastet.
* gnu/packages/games.scm (bastet): New public variable.
* gnu/packages/patches/bastet-change-source-of-unordered_set.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-10-05 19:32:45 +02:00
Marius Bakke cf6db76d2a
Merge branch 'master' into core-updates 2018-10-05 19:15:39 +02:00
Julien Lepiller c336567dad
gnu: postgresql: Fix finding extensions.
* gnu/packages/patches/postgresql-disable-resolve_symlinks.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/databases.scm (postgresql)[source]: Use it.
2018-10-04 22:26:02 +02:00
Eric Bavier 43eb42ef01
quilt: Remove test workarounds.
* gnu/packages/patches/quilt-compat-getopt-fix-second-separator.patch,
gnu/packages/patches/quilt-compat-getopt-fix-option-with-nondigit-param.patch:
New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/patchutils.scm (quilt)[source]: Use them.
[arguments]: Remove workarounds in 'patch-tests' phase.
2018-10-03 10:45:02 -05:00
Eric Bavier 68faa20e2d
quilt: Upgrade to 0.65.
* gnu/packages/patches/quilt-test-fix-regex.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patchutils.scm (quilt)[version]: Upgrade to 0.65.
[source]: Use patch.
[arguments]: Adjust 'patch-tests' phase for new tests.  Re-enable "mail"
test.
2018-10-02 22:34:39 -05:00
Mark H Weaver 94e96f7f68
gnu: icecat: Unbundle libevent, libogg, and libvorbis.
* gnu/packages/patches/icecat-use-system-media-libs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/icecat-avoid-bundled-libraries.patch: Add
another hunk to enable removal of libevent.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add patch.  In the snippet, add
libevent, libogg, libvorbis, and libtremor to the list of bundled libraries to
remove.  Add a comment regarding theora.  Remove comments regarding unbundling
cairo, which is no longer supported.
[inputs]: Add libevent, libogg, and libvorbis.
[arguments]: Add --with-system-{libevent,ogg,vorbis} to configure flags.
Add custom bootstrap phase.  Add comments.
2018-09-25 19:59:06 -04:00
Mark H Weaver 257e324791
gnu: icecat: Unbundle graphite2 and harfbuzz.
* gnu/packages/patches/icecat-use-system-graphite2+harfbuzz.patch: New file.
* gnu/packages/patches/icecat-use-system-graphite2.patch,
gnu/packages/patches/icecat-use-system-harfbuzz.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Update accordingly.
* gnu/packages/gnuzilla.scm (icecat)[source]: Add new patch.  Delete
bundled graphite2 and harfbuzz in snippet.
[inputs]: Add graphite2 and harfbuzz.
[arguments]: Add --with-system-{graphite2,harfbuzz} to configure flags.
2018-09-25 19:58:58 -04:00
Marius Bakke 6a0427af6c
Merge branch 'master' into core-updates 2018-09-26 01:11:32 +02:00
Mark H Weaver ae71cd8ac9
gnu: icecat: Add fixes from upstream mozilla-esr60 [security fixes].
Includes fixes for CVE-2018-12383 and CVE-2018-12385.

* gnu/packages/patches/icecat-CVE-2018-12383.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/patches/icecat-avoid-bundled-libraries.patch: Adapt to apply
cleanly to IceCat 60.
* gnu/packages/gnuzilla.scm (mozilla-patch): Update to fetch from
mozilla-esr60.
(icecat): Add selected changesets from upstream mozilla-esr60.
2018-09-22 13:48:32 -04:00
Ben Woodcroft 05fb1e0017
gnu: hmmer: Update to 3.2.1.
* gnu/packages/bioinformatics.scm (hmmer): Update to 3.2.1.
[origin]: Remove patch.
[license]: Change to BSD-3.
[supported-systems]: New field.
* gnu/packages/patches/hmmer-remove-cpu-specificity.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-09-22 09:16:47 +10:00
Mark H Weaver e67ad5532f
gnu: icecat: Update to 60.2.0-gnu1 (pre-release).
* gnu/packages/gnuzilla.scm (icecat): Update to 60.2.0-gnu1.
[source]: Download pre-release from alpha.gnu.org.  Remove obsolete patches.
Comment out the code to delete the bundled copies of libevent, cairo,
harfbuzz, and graphite2.
[inputs]: Use the latest ffmpeg.  Comment out libevent, cairo, harfbuzz, and
graphite2.
[native-inputs]: Add rust and cargo.
[arguments]: Remove --enable-gio and --disable-gnomeui.  Add --disable-stylo.
Comment out --with-system-{libevent,harfbuzz,graphite2}, --enable-system-cairo.
Import %cargo-build-system-modules.  Add 'patch-cargo-checksums' phase.
* gnu/packages/patches/icecat-CVE-2018-5157-and-CVE-2018-5158.patch,
gnu/packages/patches/icecat-bug-1413868-pt1.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-09-21 07:16:02 -04:00
Mark H Weaver c5327efb97
gnu: libvpx: Add upstream security fix.
* gnu/packages/patches/libvpx-use-after-free-in-postproc.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/video.scm (libvpx)[source]: Add patch.
2018-09-21 07:15:59 -04:00
Ricardo Wurmus 89ee8a6edf
gnu: rsem: Update to 1.3.1.
* gnu/packages/bioinformatics.scm (rsem): Update to 1.3.1.
[source]: Fetch from git; remove patch; delete bundled samtools.
[arguments]: Pass make flags; adjust phases.
[inputs]: Remove ncurses and samtools-0.1; add htslib-1.3.
* gnu/packages/patches/rsem-makefile.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-09-20 17:55:26 +02:00
Marius Bakke 2817ac3c18
Merge branch 'master' into core-updates 2018-09-20 13:37:58 +02:00
Marius Bakke c5c1e410cf
gnu: Reinstate xf86-video-ast.
* gnu/packages/patches/xf86-video-ast-remove-mibstore.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/xorg.scm (xf86-video-ast): New public variable.
2018-09-19 15:20:21 +02:00
Leo Famulari 9e9e5d5a26
gnu: OpenSSL 1.1: Update to 1.1.1.
* gnu/packages/tls.scm (openssl-next): Update to 1.1.1.
[arguments]: Patch a `/usr/bin/env` invocation in the 'config' script.
Adjust the documentation output.
* gnu/packages/patches/openssl-1.1.0-c-rehash-in.patch: Rename and ...
* gnu/packages/patches/openssl-1.1-c-rehash-in.patch: ... adjust patch.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2018-09-14 16:51:49 -04:00
Leo Famulari d763940711
Merge branch 'master' into core-updates 2018-09-13 13:32:39 -04:00
Danny Milosavljevic 6fe73b487b
gnu: rust: Accept more detailed gdb responses.
* gnu/packages/patches/rust-1.25-accept-more-detailed-gdb-lines.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (rust-1.25): Use it.
(rust-1.26): Use it.
(rust): Use it.
2018-09-13 17:17:15 +02:00
Eric Bavier 50b3b83143
netsurf: Register patch.
Follow-up to f9e140a243.

* gnu/local.mk (dist_patch_DATA): Add netsurf-message-timestamp.patch.
2018-09-11 20:29:04 -05:00
Tobias Geerinckx-Rice 7c8b1bf664
gnu: python-genshi: Update to 0.7.1.
* gnu/packages/python-web.scm (python-genshi): Update to 0.7.1.
[source]: Use GIT-FETCH and GIT-FILE-NAME. Remove patches.
* gnu/packages/patches/python-genshi-add-support-for-python-3.4-AST.patch,
gnu/packages/patches/python-genshi-buildable-on-python-2.7.patch,
gnu/packages/patches/python-genshi-disable-speedups-on-python-3.3.patch,
gnu/packages/patches/python-genshi-fix-tests-on-python-3.5.patch,
gnu/packages/patches/python-genshi-isstring-helper.patch,
gnu/packages/patches/python-genshi-stripping-of-unsafe-script-tags.patch:
Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-09-10 18:21:59 +02:00
Pjotr Prins 98d6543f86
gnu: Rename ldc.scm to dlang.scm.
* gnu/packages/ldc.scm: Rename to...
* gnu/packages/dlang.scm: ... this.
* gnu/local.mk (GNU_SYSTEM_MODULES): Adjust accordingly.
2018-09-10 17:47:52 +02:00
Pjotr Prins 633e8aab69
gnu: ldc: Update to 1.10.0.
* gnu/packages/ldc.scm (ldc): Update to 1.10.0.
[native-inputs]: Switch to LLVM and CLANG.
(ldc-bootstrap)[synopsis, description]: Tweak.
* gnu/packages/patches/ldc-disable-phobos-tests.patch: New file.
* gnu/packages/patches/ldc-1.7.0-disable-phobos-tests.patch: Remove.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-09-10 17:47:52 +02:00
Ludovic Courtès 19de8273ee
services: tailon: Move to (gnu services web).
This allows (gnu services admin) to remain deeper in the module graph
and to be used by (gnu services web).

* gnu/services/admin.scm (<tailon-configuration-file>)
(tailon-configuration-files-string)
(tailon-configuration-file-compiler, <tailon-configuration>)
(tailon-shepherd-service, %tailon-accounts)
(tailon-service-type): Move to...
* gnu/services/web.scm: ... here.
* gnu/tests/admin.scm: Remove.  Move test to...
* gnu/tests/web.scm (%tailon-os)
(run-tailon-test, %test-tailon): ... here.
2018-09-10 12:12:50 +02:00
Marius Bakke fe79ce3b1f
Merge branch 'master' into core-updates 2018-09-10 01:37:32 +02:00
Leo Famulari ced98c7e89
gnu: libgd: Fix CVE-2018-{5711,1000222}.
* gnu/packages/patches/gd-CVE-2018-1000222.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gd.scm (gd/fixed): New variable.
* gnu/packages/php.scm (gd-for-php)[source]: Use 'gd-CVE-2018-1000222.patch'.
2018-09-09 18:13:19 -04:00
Marius Bakke 6bbbdb1a34
gnu: oath-toolkit: Fix FTBFS with Glibc >= 2.28.
* gnu/packages/patches/oath-toolkit-glibc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/authentication.scm (oath-toolkit)[source](patches): New field.
2018-09-09 17:59:34 +02:00
Marius Bakke 0171019418
gnu: openssl: Update to 1.0.2p.
* gnu/packages/patches/openssl-1.0.2-CVE-2018-0495.patch,
gnu/packages/patches/openssl-1.0.2-CVE-2018-0732.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/tls.scm (openssl): Update to 1.0.2p.
[source](patches): Remove obsolete.
2018-09-09 17:57:39 +02:00
Marius Bakke 842c44c974
gnu: ghostscript: Remove graft for 9.24.
* gnu/packages/patches/ghostscript-CVE-2018-10194.patch,
gnu/packages/patches/ghostscript-runpath.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/ghostscript.scm (ghostscript): Update to 9.24.
(ghostscript/fixed): Remove variable.
2018-09-09 17:54:32 +02:00
Marius Bakke 0aeb134850
Merge branch 'master' into core-updates 2018-09-09 17:40:35 +02:00
Marius Bakke 0084744b3a
gnu: ghostscript: Update replacement to 9.24 [security fixes].
The following CVEs are fixed with this release: CVE-2018-15908,
CVE-2018-15909, CVE-2018-15910, CVE-2018-15911, CVE-2018-16509,
CVE-2018-16510, CVE-2018-16511, CVE-2018-16513, CVE-2018-16539,
CVE-2018-16540, CVE-2018-16541, CVE-2018-16542, CVE-2018-16543.

* gnu/packages/patches/ghostscript-CVE-2018-10194.patch: Delete file.
* gnu/packages/patches/ghostscript-CVE-2018-16509.patch,
gnu/packages/patches/ghostscript-bug-699708.patch: New files.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/ghostscript.scm (ghostscript/fixed): Update to 9.24.
[source](patches): Remove 'ghostscript-CVE-2018-10194.patch' and
'ghostscript-runpath.patch'.  Add 'ghostscript-CVE-2018-16509.patch' and
'ghostscript-bug-699708.patch'.
[arguments]: Add LDFLAGS to #:configure-flags, and a phase to create output
directory.
2018-09-09 16:43:11 +02:00
Jan Nieuwenhuizen c665774a1c
gnu: mes: Update to 0.17.1.
* gnu/packages/patches/mes-nyacc-0.86.0.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mes.scm (mes): Update to 0.17.1, depend on latest Nyacc 0.86.0.
(nyacc-for-mes): Remove.
2018-09-08 20:36:30 +02:00
Jan Nieuwenhuizen 445ecce923
gnu: nyacc: Update to 0.86.0.
* gnu/packages/patches/nyacc-binary-literals.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/mes.scm (nyacc): Update to 0.86.0, add patch.
2018-09-08 20:36:30 +02:00
Marius Bakke 70dc8db8e7
Merge branch 'master' into core-updates 2018-09-03 19:20:06 +02:00
Marius Bakke fcde1d27bb
gnu: openexr: Update to 2.3.0.
* gnu/packages/graphics.scm (openexr): Update to 2.3.0.
[source](uri): Change to new download location.
[source](snippet): Remove workaround.
[source](patches): Remove.
* gnu/packages/patches/openexr-missing-samples.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-09-03 18:58:47 +02:00
Alex Vong 2bd6ed9e4c
gnu: haskell-mode: Fix test failure.
Fixes <https://bugs.gnu.org/31726>.

Thanks to Jack Hill <jackhill@jackhill.us> for exploring different solutions
at <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=31726>.

* gnu/packages/patches/haskell-mode-unused-variables.patch,
gnu/packages/patches/haskell-mode-make-check.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/emacs.scm (haskell-mode)[source]: Use them.
[arguments]: Adjust 'pre-build' phase to embed file name.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-09-02 17:06:43 +02:00
Danny Milosavljevic 3159ef7c99
gnu: rust: Bootstrap (only) Rust 1.19.0 by mrustc.
* gnu/packages/patches/rust-1.19-mrustc.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/rust.scm (rust-1.19)[source]: Add patch
"rust-1.19-mrustc.patch".
[arguments]<#:modules>: New field.
<#:phases>[patch-cargo-tomls]: New phase.
<#:phases>[build]: Modify.
<#:phases>[install]: Modify.
[native-inputs]: Replace rust-bootstrap by mrustc.
(rust-1.23)[native-inputs]: New field.
[arguments]<#:phases>: Delete phase "patch-cargo-tomls".
2018-09-02 00:09:34 +02:00
Marius Bakke 279ed3efee
gnu: qtbase: Fix build with glibc >= 2.28.
* gnu/packages/patches/qtbase-glibc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/qt.scm (qtbase)[source](patches): Use it.
[arguments]: Remove "--no-feature-renameat2" from #:configure-flags.
2018-09-01 13:00:01 +02:00
Marius Bakke 3469a5ea47
gnu: gcc@4.9: Fix FTBFS with Glibc >= 2.28.
* gnu/packages/commencement.scm (gcc-for-libstdc++): New variable.
(libstdc++-boot0): Inherit from GCC-FOR-LIBSTDC++ instead of GCC-4.9.
* gnu/packages/gcc.scm (gcc-4.9)[source](patches): Add
"gcc-4.9-libsanitizer-ustat.patch".
* gnu/packages/patches/gcc-4.9-libsanitizer-ustat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-09-01 12:58:47 +02:00
Marius Bakke a446cf26d7
gnu: texinfo@5: Fix FTBFS with Perl >= 5.28.
* gnu/packages/patches/texinfo-5-perl-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/texinfo.scm (texinfo-5)[source](patches): New field.
2018-09-01 12:56:52 +02:00
Tobias Geerinckx-Rice aadd1d241c
gnu: Add ddcutil.
* gnu/packages/hardware.scm: New file.
(ddcutil): New public variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add the new file.
2018-08-30 19:28:10 +02:00
Tobias Geerinckx-Rice 16de7f15cb
gnu: snappy: Optimise.
* gnu/packages/compression.scm (snappy)[source]: Build with ‘-O2’.
* gnu/package/patches/snappy-add-O2-flag-in-CmakeLists.txt.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-08-30 00:51:11 +02:00
Marius Bakke 9e17757ff5
Revert "gnu: snappy: Optimise."
This causes too many rebuilds for the master branch.

This reverts commit f96ed06805.
2018-08-29 16:58:54 +02:00
Tobias Geerinckx-Rice f96ed06805
gnu: snappy: Optimise.
* gnu/packages/compression.scm (snappy)[source]: Build with ‘-O2’.
* gnu/package/patches/snappy-add-O2-flag-in-CmakeLists.txt.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-08-28 22:30:59 +02:00
Leo Famulari 8a5a1eff42
gnu: dropbear: Fix CVE-2018-15599.
* gnu/packages/patches/dropbear-CVE-2018-15599.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ssh.scm (dropbear)[source]: Use it.
2018-08-28 14:44:11 -04:00
Marius Bakke d9362003b6
gnu: GRUB: Adjust to recent binutils changes.
* gnu/packages/patches/grub-binutils-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/bootloaders.scm (grub)[source](patches): Add it.
2018-08-28 01:23:12 +02:00
Marius Bakke 61fca0fd22
Merge branch 'master' into core-updates 2018-08-28 01:22:24 +02:00
Marius Bakke 526ce41930
gnu: GRUB: Check for errors from efibootmgr.
* gnu/packages/patches/grub-check-error-efibootmgr.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/bootloaders.scm (grub)[source](patches): New field.
2018-08-28 01:19:28 +02:00
Leo Famulari 6635a3cc7f
gnu: python-pygit2: Update to 0.26.4.
* gnu/packages/python.scm (python-pygit2, python2-pygit2): Update to 0.26.4.
[source]: Remove 'python-pygit2-disable-network-tests.patch'.
* gnu/packages/patches/python-pygit2-disable-network-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-27 15:13:46 -04:00
Marius Bakke cbc8a92011
gnu: cairo: Fix undefined behaviour.
This fixes <https://bugs.freedesktop.org/show_bug.cgi?id=104325> which showed
up in Guix as an infinite loop during cairocffi tests.

* gnu/packages/patches/cairo-setjmp-wrapper.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gtk.scm (cairo)[source](patches): Add it.
2018-08-27 20:17:16 +02:00
Marius Bakke 397334d977
gnu: python-pillow: Update to 5.2.0.
* gnu/packages/patches/python-pillow-fix-failing-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/python.scm (python-pillow): Update to 5.2.0.
[source](patches, patch-flags): Remove.
[native-inputs]: Replace PYTHON-NOSE with PYTHON-PYTEST.
[arguments]: Adjust custom check phase accordingly.
2018-08-27 16:49:05 +02:00
Marius Bakke 8d48f358e9
gnu: parted: Fix build with glibc >= 2.28.
* gnu/packages/patches/parted-glibc-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/disk.scm (parted)[source](patches): New field.
2018-08-26 16:20:04 +02:00
Kei Kebreau 7d01ee66d4
gnu: Add avogadro.
* gnu/packages/chemistry.scm (avogadro): New variable.
* gnu/packages/patches/avogadro-boost148.patch,
gnu/packages/patches/avogadro-eigen3-update.patch,
gnu/packages/patches/avogadro-python-eigen-lib.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
2018-08-25 17:05:30 -04:00
Marius Bakke c37e932764
gnu: gdb: Remove obsolete patch.
* gnu/packages/patches/gdb-python-3.7.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/gdb.scm (gdb)[source](patches): Remove field.
2018-08-25 19:23:35 +02:00
Marius Bakke 839167ff9d
Merge branch 'staging' into core-updates 2018-08-25 16:44:07 +02:00
Marius Bakke 2fa4066c0a
gnu: findutils: Fix build with glibc 2.28.
* gnu/packages/patches/findutils-gnulib-libio.patch,
gnu/packages/patches/findutils-makedev.patch: New files.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/base.scm (findutils)[source](patches): Use them.
2018-08-25 16:23:36 +02:00
Marius Bakke 95895d53b0
gnu: m4: Fix FTBFS with glibc >= 2.28.
* gnu/packages/patches/m4-gnulib-libio.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/m4.scm (m4)[source](patches): New field.
2018-08-25 16:23:36 +02:00
Marius Bakke 1aef659e86
gnu: gcc: Fix build with glibc >= 2.28.
* gnu/packages/patches/gcc-libsanitizer-ustat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gcc.scm (gcc-5)[source](patches): Add it.
2018-08-25 16:23:36 +02:00
Marius Bakke e13b547407
gnu: glibc: Update to 2.28.
* gnu/packages/patches/glibc-2.28-git-fixes.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/base.scm (glibc/linux): Update to 2.28.
[source](patches): Add 'glibc-2.28-git-fixes.patch'.  Remove 2.27 equivalent.
(glibc-2.28): Remove variable.
(glibc-2.27): New public variable
2018-08-25 16:23:35 +02:00
Leo Famulari 36a8d5cdf4
gnu: OpenSSH: Update to 7.8p1.
* gnu/packages/ssh.scm (openssh): Update to 7.8p1.
[source]: Remove 'openssh-CVE-2018-15473.patch'.
* gnu/packages/patches/openssh-CVE-2018-15473.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-24 17:04:58 -04:00
Leo Famulari 58927996d9
gnu: perl-dbd-mysql: Update to 4.046.
* gnu/packages/databases.scm (perl-dbd-mysql): Update to 4.046.
[source]: Update URL. Remove 'perl-dbd-mysql-CVE-2017-10788.patch'.
* gnu/packages/patches/perl-dbd-mysql-CVE-2017-10788.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-22 15:40:08 -04:00
Leo Famulari 373a9fd4db
gnu: soundtouch: Fix CVE-2018-{1000223,14044,14045}.
* gnu/packages/patches/soundtouch-CVE-2018-14044-14045.patch,
gnu/packages/patches/soundtouch-CVE-2018-1000223.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/audio.scm (soundtouch)[source]: Use them.
2018-08-22 13:38:39 -04:00
Marius Bakke fb76ef8477
gnu: Remove GCC ICE workarounds.
* gnu/packages/patches/doxygen-gcc-ice.patch,
gnu/packages/patches/mariadb-gcc-ice.patch,
gnu/packages/patches/perf-gcc-ice.patch: Delete files
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
* gnu/packages/databases.scm (mariadb)[source](patches): Likewise.
* gnu/packages/linux.scm (perf)[source](patches): Likewise.
* gnu/packages/documentation.scm (doxygen)[inputs, arguments]: Likewise.
2018-08-22 18:01:09 +02:00
Leo Famulari 6cd2c4a83c
gnu: openssh: Don't allow remote username enumeration [fixes CVE-2018-15473].
* gnu/packages/patches/openssh-CVE-2018-15473.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/ssh.scm (openssh)[source]: Use it.
2018-08-21 11:16:30 -04:00
Ludovic Courtès 0b93d04ac5
gnu: gcc@4.8: Fix libsanitizer build issue.
Fixes <https://bugs.gnu.org/32397>.
Reported by fis trivial <ybbs.daans@hotmail.com>.

* gnu/packages/patches/gcc-4.8-libsanitizer-fix.patch: New file.
* gnu/packages/gcc.scm (gcc-4.8)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-08-19 18:21:24 +02:00
Marius Bakke a7bc1588e6
Merge branch 'staging' 2018-08-19 15:24:59 +02:00
Tobias Geerinckx-Rice 8cd80a4b61
gnu: eigen: Update to 3.3.5.
* gnu/packages/algebra.scm (eigen): Update to 3.3.5.
[source]: Remove upstreamed ARM patch and obsolete substitutions.
* gnu/packages/patches/eigen-arm-neon-fixes.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-18 16:40:31 +02:00
Kei Kebreau b66741edc9
gnu: octave: Update to 4.4.1.
* gnu/packages/maths.scm (octave): Update to 4.4.1.
(qtoctave)[source]: Remove obsolete patch.
* gnu/packages/patches/qtoctave-qt-5.11-fix.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-17 10:47:52 -04:00
Tobias Geerinckx-Rice c4f8953a12
gnu: lxc: Update to 3.0.2.
* gnu/packages/virtualization.scm (lxc): Update to 3.0.2.
[source]: Remove patch.
* gnu/packages/patches/lxc-CVE-2018-6556.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-17 05:19:05 +02:00
Konrad Hinsen e0b49c785b
gnu: racket: Update to 7.0.
* gnu/packages/scheme.scm (racket): Update to 7.0.
[inputs]: Add libedit.
[arguments]: Update the list of FFI library references to patch.
[source]: Remove 'racket-fix-xform-issue.patch'.
* gnu/packages/patches/racket-store-checksum-override.patch: Adjust.
* gnu/packages/patches/racket-fix-xform-issue.patch: Delete file.
* gnu/local.mk: Adjust accordingly.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-16 18:36:09 -04:00
Björn Höfling 4866cba66a
gnu: libgcrypt: Make build reproducible.
* gnu/packages/patches/libgcrypt-make-yat2m-reproducible.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnupg.scm (libgcrypt)[source]: Use it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-16 17:09:46 -04:00
Tobias Geerinckx-Rice 1dfb14d2f7
gnu: btrfs-progs: Update to 4.17.1.
* gnu/packages/linux.scm (btrfs-progs): Update to 4.17.1.
[source]: Remove patch.
[native-inputs]: Add python.
* gnu/packages/patches/btrfs-progs-e-value-block.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-16 22:21:53 +02:00
Tobias Geerinckx-Rice 76c888cb94
gnu: e2fsprogs: Update to 1.44.3.
* gnu/packages/linux.scm (e2fsprogs): Update to 1.44.3.
[source]: Remove glibc-2.27 patch.
(extundelete)[source]: Apply e2fsprogs-1.44 patch.
* gnu/packages/patches/e2fsprogs-glibc-2.27.patch: Delete file...
* gnu/local.mk (dist_patch_DATA): ...remove it, and add...
* gnu/packages/patches/extundelete-e2fsprogs-1.44.patch: ...this new
file.
2018-08-16 22:21:53 +02:00
Marius Bakke df570bf271
Merge branch 'master' into staging 2018-08-16 20:56:38 +02:00
Tobias Geerinckx-Rice 5dc8437fc0
gnu: qemu: Update to 3.0.0 [mitigate CVE-2018-3639].
* gnu/packages/virtualization.scm (qemu): Update to 3.0.0.
[source]: Remove patch.
* gnu/packages/patches/qemu-CVE-2018-11806.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-16 02:41:42 +02:00
Arun Isaac de30205ba0
gnu: services: Add pcscd service.
* gnu/services/security-token.scm: New file.
* gnu/tests/security-token.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register new files.
* doc/guix.texi (Miscellaneous Services): Document the service.
2018-08-16 02:46:27 +05:30
Pierre Langlois 7bcc34050b
gnu: clementine: Fix creating initial database.
It seems a recent version of sqlite broke Clementine's first startup. It turns
out we can patch clementine to fix the problem instead of providing a different
sqlite package:
<https://github.com/clementine-player/Clementine/pull/5669>

* gnu/packages/databases.scm (sqlite-with-fts3): Remove.
* gnu/packages/music.scm (clementine)[inputs]: Replace sqlite-with-fts3 with
sqlite.
[source]: Add clementine-fix-sqlite.patch.
* gnu/packages/patches/clementine-fix-sqlite.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-15 14:29:56 -04:00
Tobias Geerinckx-Rice d87e547702
gnu: openssl@1.1: Update to 1.1.0i [fix CVE-2018-0737].
Also includes a fix for CVE-2018-0732, and a different approach to
fixing CVE-2018-0495.

* gnu/packages/tls.scm (openssl-next): Update to 1.1.0i.
[sources]: Remove CVE patches.
* gnu/packages/patches/openssl-1.1.0-CVE-2018-0495.patch: Delete...
* gnu/packages/patches/openssl-1.1.0-CVE-2018-0732.patch: ...both files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-08-15 00:35:53 +02:00
Leo Famulari feccc81013
gnu: gdm: Fix CVE-2018-14424.
* gnu/packages/patches/gdm-CVE-2018-14424.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnome.scm (gdm): Use it.
2018-08-14 16:52:48 -04:00
Tobias Geerinckx-Rice b92302fd6c
gnu: translate-shell: Update to 0.9.6.8.
* gnu/packages/dictionaries.scm (translate-shell): Update to 0.9.6.8.
[source]: Remove patch.
* gnu/packages/patches/translate-shell-fix-curl-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-14 15:54:29 +02:00
Ricardo Wurmus b86c019efb
Merge branch 'staging' into core-updates 2018-08-13 20:39:32 +02:00
Björn Höfling 18e56ad7eb
gnu: aegisub: Fix build.
* gnu/packages/patches/aegisub-icu59-include-unistr.patch: New file.
* gnu/lokal.mk (dist_patch_DATA): Register it.
* gnu/packages/video.scm (aegisub)[source]: Use patch.
[arguments]: Add CXXFLAGS, Return #t from fix-ldflags phase.

Signed-off-by: Leo Famulari <leo@famulari.name>
2018-08-13 11:43:04 -04:00
Tobias Geerinckx-Rice b3543e6c79
gnu: Add oath-toolkit.
* gnu/packages/authentication.scm: New file.
(oath-toolkit): New public variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add the new file.
2018-08-11 02:00:43 +02:00
Marius Bakke 7b38f045c0
Merge branch 'master' into staging 2018-08-10 15:32:51 +02:00
Leo Famulari 4e23e8d809
gnu: wpa_supplicant: Fix CVE-2018-14526.
* gnu/packages/patches/wpa-supplicant-CVE-2018-14526.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/admin.scm (wpa-supplicant-minimal)[source]: Use it.
2018-08-09 18:18:03 -04:00
Ricardo Wurmus bcdee2dc33
gnu: polkit: Update to 0.115 [fixes CVE-2018-1116].
* gnu/packages/polkit.scm (polkit): Update to 0.115.
[origin]: Adjust snippet.
[inputs]: Replace mozjs with mozjs-52.
* gnu/packages/patches/polkit-drop-test.patch: Remove patch.
* gnu/local.mk (dist_patch_DATA): Remove it.

(cherry picked from commit 50afd712312a4b9fa42d7f9d03464e542b3aeb75)
Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-08-09 21:19:47 +02:00
Marius Bakke 88c54b1b75
gnu: xorg-server: Update to 1.20.1.
* gnu/packages/patches/xorg-server-rotate-fb.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/xorg.scm (xorg-server): Update to 1.20.1.
[source](patches): Remove 'xorg-server-rotate-fb.patch'.
2018-08-09 21:19:47 +02:00
Leo Famulari b5b610af5d
gnu: lxc: Fix CVE-2018-6556.
* gnu/packages/patches/lxc-CVE-2018-6556.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/virtualization.scm (lxc)[source]: Use it.
2018-08-08 11:51:54 -04:00
Ricardo Wurmus 4e8d9015e0
gnu: e2fsprogs: Update to 1.44.3.
* gnu/packages/linux.scm (e2fsprogs): Update to 1.44.3.
* gnu/packages/patches/e2fsprogs-glibc-2.27.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-08 14:28:24 +02:00
Marius Bakke 3418e43bf5
gnu: mariadb: Adjust to test failures on Hydra.
* gnu/packages/patches/mariadb-client-test-32bit.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/databases.scm (mariadb)[source](patches): Add it.
[arguments]: Increase retry count and test timeout.  Disable test
main.myisampack.
2018-08-07 00:51:48 +02:00
Marius Bakke 6af7c2b178
Merge branch 'master' into staging 2018-08-07 00:50:25 +02:00
Arun Isaac fa0a6d93d8
gnu: emacs-exwm: Fix fullscreen issue.
* gnu/packages/patches/emacs-exwm-fix-fullscreen-issue.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/emacs.scm (emacs-exwm)[sources]: Add
emacs-exwm-fix-fullscreen-issue.patch to patches.
2018-08-03 18:21:19 +05:30
Efraim Flashner 7b8a753672
gnu: irrlicht: Don't use bundled libraries.
* gnu/packages/patches/irrlicht-use-system-libs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/games.scm (irrlicht)[source]: Add patch. Remove bundled
code and binaries in a snippet.
[native-inputs]: Remove unzip.
[inputs]: Remove glu, add bzip2, libjpeg, libpng, libx11, libxx86vm.
[arguments]: Remove custom 'unpack phase, add custom 'chdir-to-source
phase and adjust 'fix-build-env phase to changes.
2018-08-02 12:19:42 +03:00
Marius Bakke 4214066d45
Merge branch 'master' into core-updates 2018-08-01 15:53:17 +02:00
Marius Bakke ad430c7127
gnu: xdotool: Update to 3.20160805.1.
* gnu/packages/xdisorg.scm (xdotool): Update to 3.20160805.1.
[source](patches): Remove.
[arguments]: Create output directory.
* gnu/packages/patches/xdotool-fix-makefile.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-08-01 13:32:11 +02:00
Andreas Enge 601cb1be2b
gnu: qtwebkit: Update to 5.212.0-alpha2.
* gnu/packages/patches/qtwebkit-pbutils-include.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register the patch.
* gnu/packages/qt.scm (qtwebkit): Update to 5.212.0-alpha2.
[source]: Use new upstream location. Add patch.
[build-system]: Switch to cmake-build-system.
[inputs]: Add glib, gst-plugins-base, qtlocation, qtsensors,
qtwebchannel.
[arguments]: Disable the tests. Add new configure flags. Remove all
custom phases.
2018-07-31 17:45:58 +03:00
Marius Bakke 869250809b
Merge branch 'master' into staging 2018-07-30 18:08:28 +02:00
Marius Bakke 1743172cdb
gnu: libreoffice: Fix build with newer GLM.
* gnu/packages/patches/libreoffice-glm.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/libreoffice.scm (libreoffice)[source](patches): Add it.
2018-07-29 21:31:55 +02:00
Ben Woodcroft 9e0c135c39
gnu: python-dendropy: Update to 4.4.0.
* gnu/packages/bioinformatics.scm (python-dendropy, python2-dendropy):
Update to 4.4.0.
[source]: Use GitHub URI. Remove patch.
[properties]: Remove field.
(python2-dendropy)[arguments]: Run tests with setup.py.
[native-inputs]: Remove 'python2-nose.
* gnu/packages/patches/python-dendropy-fix-tests.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Delete it.
2018-07-29 22:53:10 +10:00
Marius Bakke 1af575f04d
Merge branch 'master' into staging 2018-07-28 18:34:59 +02:00
Marius Bakke fc8778e293
gnu: gdb: Fix build with Python >= 3.7.
* gnu/packages/patches/gdb-python-3.7.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gdb.scm (gdb)[source](patches): New field.
2018-07-28 15:52:30 +02:00
Ludovic Courtès c95c9032b4
gnu: x265: Fix compilation on ARMv7.
* gnu/packages/patches/x265-arm-asm-primitives.patch: New file.
* gnu/packages/video.scm (x265)[sources](patches): Add it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-07-28 15:08:07 +02:00
Ludovic Courtès 5193ae64ca
gnu: mariadb: Work around GCC ICE on armhf-linux.
* gnu/packages/patches/mariadb-gcc-ice.patch: New file.
* gnu/packages/databases.scm (mariadb)[arguments]: Conditionally add
'apply-patch' phase.
[native-inputs]: Conditionally add "gcc-ice-patch" input.
2018-07-28 15:08:07 +02:00
Ludovic Courtès ac46a1c8e4
Merge branch 'master' into core-updates 2018-07-26 18:15:13 +02:00
Efraim Flashner 95da608451
Merge remote-tracking branch 'origin/master' into qt-updates 2018-07-25 21:30:18 +03:00
Efraim Flashner f88c8624cc
Revert "gnu: quassel: Fix building with Qt 5.11."
This reverts commit 68ddfb2e8d.

This is no longer necessary after the update to Qt-5.11.1.
2018-07-25 15:18:27 +03:00
Leo Famulari 39a57afc42
gnu: syncthing: Update to 0.14.49.
* gnu/packages/syncthing.scm (syncthing): Update to 0.14.49.
[source]: Remove obsolete patch.
[inputs]: Remove go-github-com-kardianos-osext.
* gnu/packages/patches/syncthing-fix-crash.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-07-24 19:07:06 -04:00
Efraim Flashner 02062f42e6
Revert "gnu: sddm: Fix CMake build."
This reverts commit 8674abb1dd.

This is no longer necessary after the upgrade to Qt-5.11.1.
2018-07-24 22:38:25 +03:00
Marius Bakke 706ae8e15c
Merge branch 'master' into core-updates 2018-07-24 19:56:35 +02:00
Ludovic Courtès 68f50cfdd3
gnu: xorg-server: Apply patch to fix screen rotation on KMS.
Fixes <https://bugs.freedesktop.org/show_bug.cgi?id=106715>.

* gnu/packages/patches/xorg-server-rotate-fb.patch: New file.
* gnu/packages/xorg.scm (xorg-server)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-07-24 15:48:06 +02:00
Efraim Flashner 2338755afa
gnu: python-pyqt: Don't use private sip file.
* gnu/packages/qt.scm (python-sip)[arguments]: Don't use '--sip-module'
flag in custom 'configure phase.
(python-pyqt)[sources]: Add patch.
* gnu/packages/patches/pyqt-public-sip.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-07-22 20:43:01 +03:00
Stefan Stefanović 706a6ff154
gnu: sddm: Update to 0.18.0.
* gnu/packages/display-managers.scm (sddm): Update to 0.18.0.
* gnu/packages/patches/sddm-fix-build-with-qt-5.11-1024.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.

Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2018-07-22 16:25:59 +02:00
Kei Kebreau eb5ece73a8
gnu: openbabel: Fix crash when opening NWChem output files.
* gnu/packages/patches/openbabel-fix-crash-on-nwchem-output.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/chemistry.scm (openbabel)[source]: Use it.
2018-07-21 22:28:51 -04:00
Marius Bakke 78a9a2501d
gnu: texinfo: Fix FTBFS with Perl 5.28.
* gnu/packages/patches/texinfo-perl-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/texinfo.scm (texinfo)[source](patches): New field.
2018-07-21 02:45:55 +02:00
Marius Bakke f94a8654d6
gnu: perl: Update to 5.28.0.
* gnu/packages/patches/perl-deterministic-ordering.patch: Adjust path.
* gnu/packages/patches/perl-archive-tar-CVE-2018-12015.patch,
gnu/packages/patches/perl-file-path-CVE-2017-6512.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/perl.scm (perl): Update to 5.28.0.
[source](patches): Remove obsolete.
2018-07-21 02:12:33 +02:00
Marius Bakke 6c4709889c
gnu: binutils: Update to 2.31.1.
* gnu/packages/base.scm (binutils): Update to 2.31.1.
(binutils/fixed): Remove variable
* gnu/packages/linux.scm (make-linux-libre): Remove AArch64 workaround.
* gnu/packages/patches/binutils-aarch64-symbol-relocation.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-07-19 00:52:22 +02:00
Leo Famulari a1e3da63cb
gnu: ghostscript: Fix CVE-2018-10194.
* gnu/packages/ghostscript.scm (ghostscript)[replacement]: New field.
(ghostscript/fixed): New variable.
* gnu/packages/patches/ghostscript-CVE-2018-10194.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-07-17 20:44:52 -04:00
Marius Bakke cada868c2a
gnu: Add stb-image.
* gnu/packages/stb.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Register it.
2018-07-18 01:04:14 +02:00
Jovany Leandro G.C 4fa335949a
gnu: twinkle: Add missing headers
* gnu/packages/patches/twinkle-include-qregexpvalidator-explicity.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/telephony.scm (twinkle)[source]: Use it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-07-17 15:13:48 +02:00
Danny Milosavljevic a545090ce5
gnu: python-cairocffi: Fix loading of shared libraries.
Fixes <https://bugs.gnu.org/32170>.

* gnu/packages/patches/python-cairocffi-dlopen-path.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/python.scm (python-cairocffi)[inputs]: Add glib, gtk+, pango.
[native-inputs]: Add python-pytest.
[arguments]: Enable tests.
[arguments]<#:phases>[patch-paths]: New phase.
2018-07-16 23:51:38 +02:00
Leo Famulari 36bbac734f
gnu: Remove leftover patch.
* gnu/packages/patches/file-CVE-2017-1000249.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.patch'.
2018-07-16 15:03:31 -04:00
Theodoros Foradis 0a551443ae
gnu: monero: Update to 0.12.3.0.
* gnu/packages/patches/monero-use-system-miniupnpc.patch: New file.
* gnu/local.mk: Add it.
* gnu/packages/finance.scm (monero): Update to 0.12.3.0.
[source]: Add patch. Remove snippet because miniupnpc, rapidjson
and unbound are no longer bundled in-tree.
[inputs]: Add zeromq, cppzmq, libsodium. Use monero-miniupnpc.
[arguments]: Change build-type to "release".

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-07-16 16:40:37 +02:00
Efraim Flashner 0728f60074
gnu: fltk: Update to 1.3.4-2.
* gnu/packages/fltk.scm (fltk): Update to 1.3.4-2.
[source]: Remove patches.
[inputs]: Switch from libjpeg-8 to libjpeg.
* gnu/packages/patches/fltk-shared-lib-defines.patch,
gnu/packages/patches/fltk-xfont-on-demand.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.
2018-07-16 10:02:28 +03:00
Julien Lepiller e3ebfe6ca0
gnu: bind: Update to 9.12.2.
* gnu/packages/dns.scm (bind): Update to 9.12.2.
* gnu/packages/patches/bind-CVE-2018-5738.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-07-13 15:01:08 +02:00
Marius Bakke bf77a2c87a
gnu: pulseaudio: Update to 12.0.
* gnu/packages/patches/pulseaudio-glibc-2.27.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/pulseaudio.scm (pulseaudio): Update to 12.0.
[source](patches): Remove 'pulseaudio-glibc-2.27.patch'.
[arguments]: Remove related 'bootstrap' phase.
[native-inputs]: Remove AUTOCONF, AUTOMAKE and LIBTOOL.  Add GLIB:BIN.
2018-07-13 12:53:31 +02:00
Marius Bakke 19bb999a50
gnu: openblas: Update to 0.3.1.
* gnu/packages/patches/openblas-fix-tests-i686.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
* gnu/packages/maths.scm (openblas): Update to 0.3.1.
[arguments, native-inputs]: Don't apply 'openblas-fix-tests-i686.patch'.
2018-07-13 12:31:49 +02:00
Marius Bakke 49b6dc2b4e
Merge branch 'staging' 2018-07-13 00:25:45 +02:00
Marius Bakke 7519dc95c7
gnu: xapian: Fix notmuch test failure.
* gnu/packages/patches/xapian-revert-5489fb2f8.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/search.scm (xapian)[source](patches): Use it.
2018-07-13 00:12:35 +02:00
Leo Famulari fd115bee31
gnu: Syncthing: Fix a crash bug.
* gnu/packages/patches/syncthing-fix-crash.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/syncthing.scm (syncthing)[source]: Use it.
2018-07-12 14:17:07 -04:00
Ludovic Courtès 57ac5261fe
build: Add missing patches to the distribution.
Reported by jonsger.

* gnu/local.mk (dist_patch_DATA): Add
perl-text-markdown-discount-unbundle.patch and
racket-fix-xform-issue.patch.
2018-07-11 00:59:14 +02:00
Danny Milosavljevic 75767dab99
gnu: Add patches.
* gnu/local.mk (dist_patch_DATA): Add 'rust-bootstrap-stage0-test.patch',
'rust-coresimd-doctest.patch'.
2018-07-10 21:39:08 +02:00
Alex Kost fc4f13bde8
gnu: openscenegraph: Update to 3.6.2.
* gnu/packages/graphics.scm (openscenegraph): Update to 3.6.2.
[source]: Use the new url and 'git-fetch' method.
[properties]: Add 'upstream-name'.
[native-inputs]: Add 'pkg-config'.
[inputs]: Add 'libxrandr'.
* gnu/packages/patches/openscenegraph-ffmpeg3.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-07-09 19:26:05 +03:00
Gábor Boskovits a33652ee33
services: Add prometheus-node-exporter-service-type.
* gnu/services/monitoring.scm (prometheus-node-exporter-service-type):
New variable.
(<prometheus-node-exporter-configuration>): New record type.
(prometheus-node-exporter-shepherd-service): New procedure.
* gnu/doc/guix.texi (Monitoring Services): Document it.
* gnu/tests/monitoring.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add test module.
2018-07-09 10:39:06 +02:00
Marius Bakke 873325b030
Merge branch 'master' into staging 2018-07-08 23:58:22 +02:00
Marius Bakke a4edd9ad05
gnu: xf86-video-savage: Fix FTBFS with xorg-server >= 1.20.
* gnu/packages/patches/xf86-video-savage-xorg-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/xorg.scm (xf86-video-savage)[source](patches): Use it.
2018-07-08 19:21:27 +02:00
Marius Bakke c67f603d55
gnu: xf86-video-sis: Fix FTBFS with xorg-server >= 1.20.
* gnu/packages/patches/xf86-video-sis-xorg-compat.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/xorg.scm (xf86-video-sis)[source](patches): Use it.
2018-07-08 19:21:20 +02:00
Leo Famulari 86163a017b
gnu: libgit2: Update to 0.26.4 [fixes CVE-2018-11235].
* gnu/packages/version-control.scm (libgit2): Update to 0.26.4.
(source): Adjust patch name.
* gnu/packages/patches/libgit2-0.25.1-mtime-0.patch: Rename to ...
* gnu/packages/patches/libgit2-mtime-0.patch: ... this.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2018-07-02 19:47:46 -04:00
Gábor Boskovits db024183c9
gnu: icedtea: Work around gcc segfault.
* gnu/packages/java.scm (icedtea-7)[native-inputs]: Add patch to hotspot.
* gnu/packages/patches/icedtea-7-hotspot-gcc-segfault-workaround.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-07-03 00:53:56 +02:00
Tobias Geerinckx-Rice a62764bdbb
gnu: zstd: Update to 1.3.5.
* gnu/packages/compression.scm (zstd): Update to 1.3.5.
[source]: Add two patches to make the test suite pass.
* gnu/packages/patches/zstd-fix-stdin-list-without-tty.patch,
gnu/packages/patches/zstd-fix-stdin-list-test.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add both.
2018-07-02 20:19:07 +02:00
Gábor Boskovits 1cdff8cdb7
gnu: icedtea: Work around gcc segfault.
* gnu/packages/java.scm (icedtea-6)[arguments]: Modify phases to extract
hostspot, as after the patching it becomes an archive.
[native-inputs]: add patch to hotspot-src.
* gnu/packages/patches/icedtea-6-hotspot-gcc-segfault-workaround.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-07-02 14:41:27 +02:00
Marius Bakke 92af3ce417
Merge branch 'master' into staging 2018-07-02 12:18:58 +02:00
Oleg Pykhalov 9602318736
gnu: emacs-browse-at-remote: Update to 0.10.0.
* gnu/packages/emacs.scm (emacs-browse-at-remote): Update to 0.10.0.
* gnu/packages/patches/emacs-browse-at-remote-cgit-gnu.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-07-01 19:43:17 +03:00
Kei Kebreau 7a3772b374
gnu: qtoctave: Fix build for Qt 5.11.
* gnu/packages/maths.scm (qtoctave)[source]: Add patch.
[native-inputs]: Add texlive.
* gnu/packages/patches/qtoctave-qt-5.11-fix.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-30 20:05:58 -04:00
Ricardo Wurmus f1728d4346
Merge branch 'master' into core-updates 2018-06-29 22:51:23 +02:00
Mark H Weaver 605e3345c3
gnu: icecat: Add more fixes from upstream mozilla-esr52.
Includes fixes for CVE-2018-12363, CVE-2018-12364, CVE-2018-12366, the
remaining 1 out of 2 changesets for CVE-2018-5156, and the remaining 7 out
of 17 changesets for CVE-2018-5188.

* gnu/packages/gnuzilla.scm (icecat)[source]: Add selected fixes from
the upstream mozilla-esr52 repository.
* gnu/packages/patches/icecat-bug-1413868-pt1.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-27 01:08:53 -04:00
Fis Trivial f19b263078
gnu: Add beignet.
* gnu/packages/opencl.scm (beignet): New variable.
* gnu/packages/patches/beignet-correct-file-names.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2018-06-26 23:01:16 +02:00
Leo Famulari 8dbfaff028
gnu: libtiff: Fix CVE-2018-{8905,10963}.
* gnu/packages/patches/libtiff-CVE-2018-8905.patch,
gnu/packages/patches/libtiff-CVE-2018-10963.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/image.scm (libtiff)[replacement]: New field.
(libtiff/fixed): New variable.
2018-06-26 11:49:07 -04:00
Marius Bakke a1fa2691cd
gnu: Add gcc@8.
* gnu/packages/patches/gcc-8-strmov-store-file-names.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/gcc.scm (gcc-8): New public variable.
2018-06-26 17:27:40 +02:00
宋文武 3272bcfd56
Revert "gnu: gnu: Make alsa find its plugins by setting ALSA_PLUGIN_DIR."
This reverts commit 2101cc3fb6.

With commit 1e3861eb, we can do it without ALSA_PLUGIN_DIR.
See <https://bugs.gnu.org/31934> for details.
2018-06-26 20:28:39 +08:00
Marius Bakke a167873c67
Merge branch 'master' into staging 2018-06-26 13:51:26 +02:00
Efraim Flashner 64b2efc12c
gnu: jamvm@1.5.1: Fix building on armhf-linux.
* gnu/packages/java.scm (jamvm@1.5.1)[source]: Add patch.
* gnu/packages/patches/jamvm-arm.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-06-26 14:45:55 +03:00
Gábor Boskovits 7c7323e432
gnu: java-commons-collections: Fix java8 errors.
* gnu/packages/java.scm (java-commons-collections)[source]: Add patch.
* gnu/packages/patches/java-commons-collections-fix-java8.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-26 11:35:14 +02:00
Tobias Geerinckx-Rice 0e66f4a12f
gnu: dovecot-trees: Fix build with dovecot 2.3.
* gnu/packages/mail.scm (dovecot-trees)[source]: Add patch.
* gnu/packages/patches/dovecot-trees-support-dovecot-2.3.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-26 02:16:57 +02:00
Fis Trivial 7f996b4ca5
gnu: Add opencl-headers.
* gnu/packages/opencl.scm: New file.
(make-opencl-headers): New function.
(opencl-headers-2.2, opencl-headers-2.1, opencl-headers-2.0,
opencl-headers-1.2, opencl-headers-1.1, opencl-headers-1.0, opencl-headers):
New variables.

* gnu/local.mk: Add the new file.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-25 23:34:43 +02:00
Danny Milosavljevic 7f93bbd5aa
services: Add fingerprint identification service.
* gnu/services/authentication.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
* doc/guix.texi (Miscellaneous Services): Document it.
2018-06-23 00:14:27 +02:00
Tobias Geerinckx-Rice 8edebd3207
gnu: nyx: Show header stats.
This is a follow-up to commit 18ab54d4a2
and fixes a regression introduced by Nyx 2.0.4 + Python 3.

* gnu/packages/tor.scm (nyx)[source]: Add patch.
* gnu/packages/patches/nyx-show-header-stats-with-python3.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-22 01:07:20 +02:00
Marius Bakke 4dfea1010a
Merge branch 'master' into staging 2018-06-21 15:52:26 +02:00
Julien Lepiller 6a8d338158
gnu: ocaml: Build reproducibly.
* gnu/packages/patches/ocaml-enable-ocamldoc-reproducibility.patch: New
file.
* gnu/packages/ocaml.scm (ocaml)[origin]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-20 21:26:16 +02:00
Marius Bakke b7a46ed227
gnu: openblas: Fix build on i686.
* gnu/packages/patches/openblas-fix-tests-i686.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/maths.scm (openblas)[native-inputs]: Add it.
[arguments]: Add phase to apply it on i686 systems only.
2018-06-20 16:02:04 +02:00
Tobias Geerinckx-Rice ab5fc6a982
gnu: libyaml: Update to 0.1.7.
* gnu/packages/web.scm (libyaml): Update to 0.1.7.
[source]: Remove patch.
* gnu/packages/patches/libyaml-CVE-2014-9130.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-06-19 22:23:40 +02:00
Tobias Geerinckx-Rice 8893218a7d
gnu: mrrescue: Work on Löve 11.
* gnu/packages/games.scm (mrrescue)[arguments]: Extract & patch the game
data, and point ‘love’ to this modified copy.  Minor cosmetic tweaks.
[native-inputs]: Add unzip, patch, and the love-11.patch which is...
* gnu/packages/patches/mrrescue-support-love-11.patch: ...a new file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-19 22:20:15 +02:00
Efraim Flashner 2b94c14c9e
gnu: x265: Fix building on armhf-linux and aarch64-linux.
* gnu/packages/video.scm (x265)[source]: Add patch.
[arguments]: Enable PIC on armhf-linux.
* gnu/packages/patches/x265-fix-ppc64le-build.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-06-19 21:49:12 +03:00
Marius Bakke 0106d6b40d
Merge branch 'master' into staging 2018-06-19 17:02:16 +02:00
Leo Famulari bc19a68c5c
gnu: QEMU: Fix CVE-2018-11806.
* gnu/packages/patches/qemu-CVE-2018-11806.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/virtualization.scm (qemu)[source]: Use it.
2018-06-19 01:19:35 -04:00
Leo Famulari 9f162c0ab4
gnu: OpenSSL 1.1.0: Fix CVE-2018-{0495,0732}.
* gnu/packages/patches/openssl-1.1.0-CVE-2018-0495.patch,
gnu/packages/patches/openssl-1.1.0-CVE-2018-0732.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/tls.scm (openssl-next)[source]: Use them.
2018-06-18 12:04:49 -04:00
Leo Famulari b8ea0db3ae
gnu: OpenSSL 1.0.2: Fix CVE-2018-{0495,0732}.
* gnu/packages/patches/openssl-1.0.2-CVE-2018-0495.patch,
gnu/packages/patches/openssl-1.0.2-CVE-2018-0732.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/tls.scm (openssl)[replacement]: New field.
(openssl/fixed): New variable.
2018-06-18 12:04:49 -04:00
Marius Bakke 6969c4de44
Merge branch 'master' into staging 2018-06-18 15:29:38 +02:00
Tobias Geerinckx-Rice 69e0aac3a7
gnu: zathura-pdf-mupdf: Link to JPEG libraries.
* gnu/packages/pdf.scm (zathura-pdf-mupdf)[source]: Add patch.
* gnu/packages/patches/zathura-pdf-mupdf-link-to-jpeg-libraries.patch:
New file.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-18 04:04:41 +02:00
Pierre Neidhardt a14de83213
gnu: upx: Fix CVE-2017-15056.
* gnu/packages/patches/upx-protect-against-bad-crafted-input.patch: New file.
* gnu/packages/compression.scm (upx)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-06-17 01:40:13 +02:00
Marius Bakke ed2ae0dc7f
gnu: strace: Update to 4.23.
* gnu/packages/linux.scm (strace): Update to 4.23.
[source]: Remove obsolete patch.
* gnu/packages/patches/strace-kernel-4.16.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-06-16 21:35:26 +02:00
Marius Bakke 406c83f78d
gnu: perl: Fix CVE-2018-12015.
* gnu/packages/patches/perl-archive-tar-CVE-2018-12015.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/perl.scm (perl-5.26.2)[source](patches): Use it.
2018-06-16 21:35:25 +02:00
Marius Bakke cdbcfc113b
gnu: linux-libre: Fix build on AArch64.
* gnu/packages/patches/binutils-aarch64-symbol-relocation.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/base.scm (binutils/fixed): New public variable.
* gnu/packages/linux.scm (make-linux-libre)[native-inputs]: On aarch64, define
new ld-wrapper with the above binutils and use it.
2018-06-16 21:35:24 +02:00
Leo Famulari 12e530ba63
gnu: BIND: Fix CVE-2018-5738.
* gnu/packages/patches/bind-CVE-2018-5738.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/dns.scm (isc-bind)[source]: Use it.
2018-06-15 16:41:16 -04:00
Leo Famulari b6c675c693
gnu: GnuPG 1.4: Update to 1.4.23.
* gnu/packages/gnupg.scm (gnupg-1): Update to 1.4.23.
[source]: Remove patch.
* gnu/packages/patches/gnupg-1.4-CVE-2018-12020.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-06-14 15:35:23 -04:00
Tobias Geerinckx-Rice 1ba7a62362
gnu: python-nose-timer: Update to 0.7.2.
* gnu/packages/check.scm (python-nose-timer): Update to 0.7.2.
[source]: Remove patch...
* gnu/packages/patches/python-nose-timer-drop-ordereddict.patch:
...delete file...
* gnu/local.mk (dist_patch_DATA): ...and remove it.
2018-06-14 18:55:46 +02:00
Clément Lassieur ab6f400531
gnu: password-store: Update to 1.7.2.
* gnu/packages/password-utils.scm (password-store): Update to 1.7.2.
[source]: Remove 'password-store-gnupg-compat.patch'.
* gnu/packages/patches/password-store-gnupg-compat.patch: Remove file.
* gnu/local.mk (dist_patch_DATA): Remove it.
2018-06-14 17:36:59 +02:00
Ludovic Courtès b5edc47912
gnu: flann: Fix builds with CMake >= 3.11.
* gnu/packages/patches/flann-cmake-3.11.patch: New file.
* gnu/packages/maths.scm (flann)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-12 15:23:34 +02:00
Tobias Geerinckx-Rice eb5d2792a0
gnu: freetype: Update to 2.9.1.
* gnu/packages/fontutils.scm (freetype): Update to 2.9.1.
[source]: Remove patch...
* gnu/packages/patches/freetype-CVE-2018-6942.patch: ...delete...
* gnu/local.mk (dist_patch_DATA): ...and remove it.
2018-06-12 15:06:20 +02:00
Tobias Geerinckx-Rice f68f5e28ed
gnu: cups, cups-minimal: Update to 2.2.8.
* gnu/packages/cups.scm (cups-minimal): Update to 2.2.8.
[source]: Remove patch...
* gnu/packages/patches/cups-fix-builds-without-PAM.patch: ...delete...
* gnu/local.mk (dist_patch_DATA): ..and remove it.
2018-06-12 15:06:19 +02:00
Christopher Baines e7a25d2ae7
gnu: elixir: Enable more tests and remove patch.
Previously, due to issues in the erlang package, many tests would fail, and
the package would also nondeterministically fail to build. This is now
fixed (by patching occurrences of /bin/sh in the erlang package), so all the
tests can be run.

* gnu/packages/elixir.scm (elixir)[source]: Remove patches.
[arguments]: Remove the fix-or-disable-tests phase. Add a new set-home phase
to set the HOME environment variable prior to running the tests.
* gnu/packages/patches/elixir-disable-failing-tests.patch: Delete this file.
* gnu/local.mk: Remove now deleted patch.
2018-06-12 07:46:18 +01:00
Marius Bakke a032b4454b
Merge branch 'master' into staging 2018-06-11 23:52:15 +02:00
宋文武 af09dabf70
gnu: Add keepalived.
* gnu/packages/cluster.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2018-06-10 22:57:01 +08:00
Danny Milosavljevic fc51c11b9d
gnu: mumble: Fix build with Boost 1.66.
Fixes <https://bugs.gnu.org/31775>.

* gnu/packages/patches/mumble-1.2.19-abs.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/telephony.scm (mumble)[source]: Add it.
2018-06-10 16:03:35 +02:00
Alex Vong 09b21b77cc
gnu: heimdal: Update to 7.5.0.
* gnu/packages/kerberos.scm (heimdal): Update to 7.5.0.
[source]: Update source uri.  Remove patches.
[arguments]: Adjust #:configure-flags and build phases accordingly.
[inputs]: Add sqlite.
[native-inputs]: Add texinfo and unzip.
* gnu/packages/patches/heimdal-CVE-2017-6594.patch,
  gnu/packages/patches/heimdal-CVE-2017-11103.patch: Remove files.
* gnu/local.mk (dist_patch_DATA): Remove them.

Co-authored-by: 宋文武 <iyzsong@member.fsf.org>
2018-06-10 16:00:45 +08:00
Leo Famulari 65956ad352
gnu: GnuPG 1.4: Fix CVE-2018-12020.
* gnu/packages/patches/gnupg-1.4-CVE-2018-12020.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/gnupg.scm (gnupg-1)[source]: Use it.
2018-06-09 17:50:03 -04:00
Julien Lepiller 458687d586
gnu: Add maven-artifact.
* gnu/packages/maven.scm (maven-artifact): New variable.
* gnu/packages/patches/maven-generate-component-xml.patch: New file.
* gnu/packages/patches/maven-generate-javax-inject-named.patch: New
file.
* gnu/local.mk (dist_patch_DATA): Add them.
2018-06-09 23:24:52 +02:00
Ludovic Courtès 849a1399ca
gnu: doxygen: Work around GCC ICE on armhf-linux.
Reported by Mark H Weaver <mhw@netris.org>
at <https://debbugs.gnu.org/cgi/bugreport.cgi?bug=31708#10>.

* gnu/packages/patches/doxygen-gcc-ice.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/documentation.scm (doxygen)[inputs]: Add "gcc-ice-patch"
on armhf-* only.
[arguments]: Add 'apply-gcc-patch' phase on armhf-* only.
2018-06-08 15:23:39 +02:00
Ricardo Wurmus 54179e2463
gnu: libreoffice: Update to 6.0.5.1.
* gnu/packages/patches/libreoffice-icu.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/libreoffice.scm (libreoffice): Update to 6.0.5.1.
[source]: Add patch.
[inputs]: Add libepubgen and libqxp.
[arguments]: Adjust "prepare-src" phase.
2018-06-07 11:09:54 +02:00
Adam Zimmerman d6dd64af37
gnu: opensmtpd: Fix crash on table authentication.
* gnu/packages/patches/opensmtpd-fix-crash.patch: New patch.
* gnu/packages/mail.scm (opensmtpd)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Signed-off-by: Tobias Geerinckx-Rice <me@tobias.gr>
2018-06-07 03:57:42 +02:00
Ricardo Wurmus 8709624756
Merge branch 'origin/core-updates-next' into core-updates 2018-06-06 23:01:48 +02:00
Ludovic Courtès 7394e264fc
gnu: perf: Work around GCC bug.
Works around <https://bugs.gnu.org/31708>.

* gnu/packages/patches/perf-gcc-ice.patch: New patch.
* gnu/packages/linux.scm (perf)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-06-04 14:03:54 +02:00
Ricardo Wurmus 32da38d572
Merge branch 'master' into core-updates 2018-06-04 11:25:48 +02:00
Efraim Flashner 68ddfb2e8d
gnu: quassel: Fix building with Qt 5.11.
* gnu/packages/irc.scm (quassel)[sources]: Add patch. Return #t from
snippet.
* gnu/packages/patches/quassel-qt-5.11.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-06-03 15:49:50 +03:00
Ludovic Courtès a13c1bf4ca
Merge branch 'master' into core-updates 2018-06-01 23:41:40 +02:00
Stefan Stefanović 8674abb1dd
gnu: sddm: Fix CMake build.
* gnu/packages/display-managers.scm (sddm): Fix CMake build.
* gnu/local.mk (dist_patch_DATA): Register it.
* gnu/packages/patches/sddm-fix-build-with-qt-5.11-1024.patch: New file.

Signed-off-by: Rutger Helling <rhelling@mykolab.com>
2018-06-01 12:17:00 +02:00
Mark H Weaver 341a36b32c
Merge branch 'master' into core-updates 2018-05-30 02:21:29 -04:00
Mark H Weaver a21bcd7079
Revert "gnu: swig: Patch for Octave 4.4."
This reverts commit 3771000f89.
2018-05-30 02:18:26 -04:00
Mark H Weaver c0d7c1244a
Merge branch 'master' into core-updates 2018-05-29 21:20:47 -04:00
Kei Kebreau 3771000f89
gnu: swig: Patch for Octave 4.4.
* gnu/packages/swig.scm (swig)[source]: Add patch.
* gnu/packages/patches/swig-octave-patches.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-05-29 18:20:38 -04:00
Mark H Weaver 82b695b834
Merge branch 'master' into core-updates 2018-05-28 20:45:37 -04:00
Mark H Weaver 073cc31313
gnu: Fix typo.
Fix a typo introduced in commit 2101cc3fb6.

* gnu/local.mk: Add back the missing comment character.
2018-05-28 09:04:44 -04:00
Fis Trivial 385357c0d7
gnu: Add fifo-map.
* gnu/packages/cpp.scm (fifo-map): New variable.
* gnu/packages/patches/fifo-map-fix-flags-for-gcc.patch: New file.
* gnu/packages/patches/fifo-map-remove-catch.hpp.patch: New file.
* gnu/local.mk: Add new patch files.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2018-05-28 13:48:52 +02:00
Pierre Langlois 01c4869003
gnu: libmygpo-qt: Fix Qt 5.11 build.
The update to Qt 5.11.0 broke libmygpo-qt. It turned it was using a deprecated
CMake function (qt5_use_moduldes).  Let's pick up two upstream patches that
fix the issue: https://github.com/gpodder/libmygpo-qt/pull/15

As mentioned in the the pull request, there is now a test failure but it looks
harmless.

* gnu/packages/patches/libmygpo-qt-fix-qt-5.11.patch,
gnu/packages/patches/libmygpo-qt-missing-qt5-modules.patch: New files.
* gnu/local.mk (dist_patch_DATA): Add them.
* gnu/packages/music.scm (libmygpo-qt)[source]: Add patches.
[arguments]: Build tests but do not run them.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2018-05-27 22:33:01 +03:00
Julien Lepiller 2101cc3fb6
gnu: gnu: Make alsa find its plugins by setting ALSA_PLUGIN_DIR.
* gnu/packages/patches/alsa-lib-add-environment-variable.patch: New
file.
* gnu/packages/linux.scm (alsa-lib)[source]: Use it.
[native-search-paths]: Add ALSA_PLUGIN_DIR.
* gnu/local.mk (dist_patch_DATA): Add it.
2018-05-27 19:05:34 +02:00
Mark H Weaver 9d10a63402
Merge branch 'master' into core-updates 2018-05-24 02:34:08 -04:00
Ludovic Courtès e470abf8b7
gnu: Move 'indent' to code.scm.
Suggested by Pierre Neidhardt <ambrevar@gmail.com>.

* gnu/packages/indent.scm: Remove.  Move 'indent' to...
* gnu/packages/code.scm (indent):  ... here.  New variable.
* gnu/local.mk (GNU_SYSTEM_MODULES): Remove indent.scm.
2018-05-23 12:14:27 +02:00
Rutger Helling e0c9aed820
gnu: mesa: Update to 18.0.4.
* gnu/packages/gl.scm (mesa): Update to 18.0.4.
[source]: Remove mesa-wayland-egl-symbols-check-mips.patch.
[arguments]: Remove wayland from --with-platforms configure flag.
* gnu/local.mk: Remove mesa-wayland-egl-symbols-check-mips.patch.
* gnu/packages/patches/mesa-wayland-egl-symbols-check-mips.patch: Remove file.
2018-05-22 18:09:59 +02:00
Mark H Weaver 0661758e13
Merge branch 'master' into core-updates 2018-05-21 13:22:32 -04:00
Andreas Enge a92d97266d
gnu: pius: Fix incompatibility with newer GnuPG versions.
* gnu/packages/gnupg.scm (pius)[source]: Add patch.
* gnu/packages/patches/pius.patch: New file.
* gnu/local.mk (dist_patch_DATA): Register it.
2018-05-21 17:05:56 +02:00